1 | #!/bin/bash |
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2 | #MSUB -r WeightsMask # nom de la requete |
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3 | #MSUB -o Out_WeightsMask # nom du fichier de sortie |
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4 | #MSUB -e Out_WeightsMask # nom du fichier de sortie |
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5 | #MSUB -eo |
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6 | #MSUB -n 4 # Reservation des processeurs pour le job |
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7 | #MSUB -T 1800 # Limite temps (en secondes) |
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8 | #MSUB -q standard |
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9 | #MSUB -Q test |
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10 | #MSUB -p devcmip6 |
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11 | |
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12 | ### =========================================================================== |
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13 | ### |
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14 | ### Creates interpolation weights between ORCA and atmospher grids. |
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15 | ### Interpolates ORCA mask to atmosphere grid. |
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16 | ### Weight files are at OASIS-MCT format. |
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17 | ### |
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18 | ### Atmosphere grid may be lon/lat LMDZ or DYNAMICO icosahedron |
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19 | ### |
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20 | ### Documentation : https://forge.ipsl.jussieu.fr/igcmg/wiki/IPSLCM6/MOSAIX |
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21 | ### =========================================================================== |
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22 | ## |
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23 | ## Warning, to install, configure, run, use any of Olivier Marti's |
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24 | ## software or to read the associated documentation you'll need at least |
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25 | ## one (1) brain in a reasonably working order. Lack of this implement |
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26 | ## will void any warranties (either express or implied). |
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27 | ## O. Marti assumes no responsability for errors, omissions, |
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28 | ## data loss, or any other consequences caused directly or indirectly by |
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29 | ## the usage of his software by incorrectly or partially configured |
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30 | ## personal. |
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31 | ## |
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32 | ## SVN information |
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33 | # $Author: omamce $ |
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34 | # $Date: 2018-03-12 11:17:59 +0100 (Mon, 12 Mar 2018) $ |
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35 | # $Revision: 3625 $ |
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36 | # $Id: CreateWeightsMask.bash 3625 2018-03-12 10:17:59Z omamce $ |
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37 | # $HeadURL$ |
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38 | # $Log: $ |
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39 | |
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40 | ## |
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41 | ## Configuration |
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42 | ## =========================================================================== |
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43 | |
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44 | # |
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45 | # Defines models |
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46 | # ============== |
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47 | OCE=ORCA2.3 |
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48 | #OCE=eORCA1.2 |
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49 | #OCE=ORCA025 |
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50 | |
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51 | ATM=ICO30 |
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52 | #ATM=ICO40 |
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53 | #ATM=ICO450 |
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54 | #ATM=LMD9695 |
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55 | #ATM=LMD144X142 |
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56 | |
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57 | # |
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58 | # Defines OCE grids to handle |
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59 | # =========================== |
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60 | ListOCEGRID="T U V" |
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61 | Listorder="1st" # " 2nd |
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62 | |
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63 | ## =========================================================================== |
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64 | ## |
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65 | ## You should not change anything below this line .... |
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66 | ## |
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67 | ## =========================================================================== |
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68 | SUBMIT_DIR=$(pwd) |
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69 | |
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70 | # |
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71 | # Defines computer |
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72 | # ================ |
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73 | if [[ $(hostname) = curie* ]] ; then arch=curie ; center=tgcc ; fi |
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74 | if [[ $(hostname) = irene* ]] ; then arch=irene ; center=tgcc ; fi |
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75 | PROGRAM=$(basename ${0}) |
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76 | |
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77 | case ${arch} in |
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78 | ( curie | irene ) |
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79 | set +vx |
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80 | module unload cdo nco ferret |
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81 | module unload netcdf hdf5 |
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82 | module load python # /2.7.12 |
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83 | module load netcdf/4.3.3.1_hdf5_parallel # Version for XIOS |
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84 | module load nco |
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85 | R_IN=$(ccc_home -u igcmg --cccwork)/IGCM |
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86 | TMPDIR=${SCRATCHDIR}/TMP |
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87 | SUBMIT_DIR=${BRIDGE_MSUB_PWD:-${SUBMIT_DIR}} |
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88 | PROGRAM=${BRIDGE_MSUB_REQNAME} |
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89 | ;; |
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90 | ( * ) |
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91 | exit -1 |
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92 | ;; |
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93 | esac |
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94 | |
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95 | set -x ; set -e |
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96 | |
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97 | mkdir -p ${TMPDIR}/${OCE}x${ATM} || exit 1 |
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98 | cd ${TMPDIR}/${OCE}x${ATM} || exit 1 |
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99 | rm -f * |
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100 | |
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101 | # |
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102 | # Suffixes |
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103 | # --------------------------------------------------------------------------- |
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104 | Listocegrid=${ListOCEGRID~} |
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105 | |
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106 | case ${OCE} in |
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107 | ( *ORC* ) oce=orc ; oce_domain_type=curvilinear ;; |
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108 | esac |
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109 | case ${ATM} in |
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110 | ( *dynamico* ) atm=ico ; atm_domain_type=unstructured ;; |
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111 | ( *ICO* ) atm=ico ; atm_domain_type=unstructured ;; |
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112 | ( *lmd* | *LMD* ) atm=lmd ; atm_domain_type=rectilinear ;; |
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113 | esac |
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114 | |
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115 | # |
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116 | # Format for OASIS files : should be NetCDF3 classic or NetCDF3 64 bits |
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117 | # --------------------------------------------------------------------------- |
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118 | FL_FMT=64bit |
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119 | |
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120 | |
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121 | cp ${SUBMIT_DIR}/bin/interpol.exe . |
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122 | cp ${SUBMIT_DIR}/update_xml.py . |
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123 | |
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124 | ## |
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125 | ## NEMO T point towards ATM - 1st order |
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126 | ## =========================================================================== |
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127 | cp ${R_IN}/OCE/NEMO/${OCE}/${OCE}_coordinates_mask.nc . |
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128 | cp ${R_IN}/ATM/${ATM}/${ATM}_grid.nc . |
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129 | |
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130 | ln -s ${OCE}_coordinates_mask.nc oce_grid.nc |
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131 | ln -s ${ATM}_grid.nc atm_grid.nc |
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132 | |
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133 | echo ${Green}"${OCE} T toward ${ATM} - 1storder"${Norm} |
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134 | cp ${SUBMIT_DIR}/iodef_oce_to_atm.xml iodef.xml |
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135 | |
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136 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/file_definition/file[@id="file_src"]/field[@id="mask_src"]' -k name -v maskutil_T |
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137 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/domain_definition/domain[@id="domain_src"]' -k type -v ${oce_domain_type} |
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138 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/domain_definition/domain[@id="domain_dst"]' -k type -v ${atm_domain_type} |
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139 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="file_src"]/field[@id="mask_source"]' -k name -v maskutil_T |
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140 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]' -k name -v dia_t${oce}_to_t${atm}_1storder |
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141 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="title"]' -t "${OCE} mask interpolated to ${ATM}" |
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142 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="source_grid"]' -t ${oce_domain_type} |
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143 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="dest_grid"]' -t ${atm_domain_type} |
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144 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="order"]' -t 1 |
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145 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_src"]' -k type -v ${oce_domain_type} |
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146 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]' -k type -v ${atm_domain_type} |
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147 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]/interpolate_domain' -k weight_filename -v rmp_t${oce}_to_t${atm}_1storder.nc |
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148 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]/interpolate_domain' -k order -v 1 |
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149 | |
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150 | cp iodef.xml iodef_t${oce}_to_t${atm}_1storder.xml |
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151 | |
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152 | time /usr/bin/time ccc_mprun ./interpol.exe --mask_src=yes --mask_dst=no |
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153 | |
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154 | ## |
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155 | ## Correct spurious values (extremes) |
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156 | ## =========================================================================== |
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157 | cat <<EOF > correction_masque.nco |
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158 | where (OceFrac < 0.00001 ) OceFrac=OceFrac.get_miss() ; |
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159 | where (OceFrac > 0.99999 ) OceFrac=1.0 ; |
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160 | OceFrac.delete_miss() ; |
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161 | // Fill masked values to land values |
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162 | where (OceFrac > 1.0 ) OceFrac=0.0 ; |
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163 | where (OceFrac < 0.0 ) OceFrac=0.0 ; |
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164 | EOF |
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165 | ncap2 -h --overwrite --script-file correction_masque.nco dia_t${oce}_to_t${atm}_1storder.nc tmp_dia_t${oce}_to_t${atm}_1storder.nc ; mv tmp_dia_t${oce}_to_t${atm}_1storder.nc dia_t${oce}_to_t${atm}_1storder.nc |
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166 | ncatted -h -a missing_value,OceFrac,d,,"" -a _FillValue,OceFrac,d,,"" dia_t${oce}_to_t${atm}_1storder.nc |
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167 | |
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168 | ## |
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169 | ## Creates mask on ATM grid |
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170 | ## =========================================================================== |
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171 | cp dia_t${oce}_to_t${atm}_1storder.nc dia_t${oce}_to_t${atm}_1storder_mask.nc |
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172 | ncks -h --overwrite -v OceFrac dia_t${oce}_to_t${atm}_1storder_mask.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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173 | ncks -h --append -v aire atm_grid.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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174 | [[ ${atm} = *ico* ]] && ncks -h --append -v bounds_lon,bounds_lat atm_grid.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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175 | |
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176 | cat <<EOF > creation_masque.nco |
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177 | where (OceFrac > 0.0 ) OceFrac=1 ; |
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178 | where (OceFrac <= 0.0 ) OceFrac=0 ; |
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179 | EOF |
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180 | ncap2 -h --overwrite --script-file creation_masque.nco dia_t${oce}_to_t${atm}_1storder_mask.nc tmp_dia_t${oce}_to_t${atm}_1storder_mask.nc ; mv tmp_dia_t${oce}_to_t${atm}_1storder_mask.nc dia_t${oce}_to_t${atm}_1storder_mask.nc |
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181 | ncrename -h -v OceFrac,OceMask dia_t${oce}_to_t${atm}_1storder_mask.nc |
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182 | |
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183 | ncks -h --append -v OceMask dia_t${oce}_to_t${atm}_1storder_mask.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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184 | |
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185 | |
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186 | ## |
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187 | ## NEMO, other case, towards ATM |
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188 | ## =========================================================================== |
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189 | for order in ${Listorder} ; do |
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190 | case ${order} in |
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191 | ( 1st ) num_order=1 ;; |
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192 | ( 2nd ) num_order=2 ;; |
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193 | esac |
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194 | |
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195 | for OCEGRID in ${ListOCEGRID} ; do |
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196 | ocegrid=${OCEGRID~} |
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197 | |
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198 | if [[ !( ${order} = 1st && ${OCEGRID} = T ) ]] ; then |
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199 | |
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200 | echo ${Green}"${OCE} ${OCEGRID} toward ${ATM} - ${order}order"${Norm} |
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201 | |
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202 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/file_definition/file[@id="file_src"]/field[@id="mask_src"]' -k name -v maskutil_${OCEGRID} |
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203 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/domain_definition/domain[@id="domain_src"]' -k type -v ${oce_domain_type} |
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204 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/domain_definition/domain[@id="domain_dst"]' -k type -v ${atm_domain_type} |
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205 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="file_src"]/field[@id="mask_source"]' -k name -v maskutil_${OCEGRID} |
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206 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]' -k name -v dia_${ocegrid}${oce}_to_t${atm}_${order}order |
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207 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="title"]' -t "${OCE} mask interpolated to ${ATM}" |
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208 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="source_grid"]' -t ${oce_domain_type} |
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209 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="dest_grid"]' -t ${atm_domain_type} |
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210 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="order"]' -t ${num_order} |
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211 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_src"]' -k type -v ${oce_domain_type} |
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212 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]' -k type -v ${atm_domain_type} |
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213 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]/interpolate_domain' -k order -v ${num_order} |
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214 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]/interpolate_domain' -k weight_filename -v rmp_${ocegrid}${oce}_to_t${atm}_${order}order.nc |
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215 | cp iodef.xml iodef_${ocegrid}${oce}_t${atm}_${order}order.xml |
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216 | |
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217 | time /usr/bin/time ccc_mprun ./interpol.exe --mask_src=yes --mask_dst=yes |
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218 | fi |
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219 | |
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220 | done |
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221 | done |
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222 | |
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223 | ## |
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224 | ## ATM towards NEMO points |
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225 | ## =========================================================================== |
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226 | cp ${SUBMIT_DIR}/iodef_atm_to_oce.xml iodef.xml |
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227 | |
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228 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/domain_definition/domain[@id="domain_src"]' -k type -v ${atm_domain_type} |
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229 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/domain_definition/domain[@id="domain_dst"]' -k type -v ${oce_domain_type} |
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230 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="title"]' -t "${ATM} mask interpolated to ${OCE}" |
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231 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="source_grid"]' -t ${atm_domain_type} |
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232 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="dest_grid"]' -t ${oce_domain_type} |
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233 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_src"]' -k type -v ${atm_domain_type} |
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234 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]' -k type -v ${oce_domain_type} |
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235 | |
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236 | for order in ${Listorder} ; do |
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237 | case ${order} in |
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238 | ( 1st ) num_order=1 ;; |
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239 | ( 2nd ) num_order=2 ;; |
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240 | esac |
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241 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]/interpolate_domain' -k order -v ${num_order} |
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242 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]/variable[@name="order"]' -t ${num_order} |
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243 | |
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244 | for OCEGRID in ${ListOCEGRID} ; do |
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245 | ocegrid=${OCEGRID~} |
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246 | |
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247 | echo ${Green}"${ATM} toward ${OCE} ${OCEGRID} - ${order}order"${Norm} |
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248 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_read"]/file_definition/file[@id="file_dst"]/field[@id="mask_dst"]' -k name -v mask_${OCEGRID} |
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249 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="file_dst"]/field[@id="mask_dest"]' -k name -v mask_${OCEGRID} |
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250 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/file_definition/file[@id="dia"]' -k name -v dia_t${atm}_to_${ocegrid}${oce}_${order}order |
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251 | python update_xml.py -i iodef.xml -n 'context[@id="interpol_run"]/domain_definition/domain[@id="domain_dst"]/interpolate_domain' -k weight_filename -v rmp_t${atm}_to_${ocegrid}${oce}_${order}order.nc |
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252 | cp iodef.xml iodef_t${atm}_to_${ocegrid}${oce}_${order}order.xml |
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253 | |
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254 | time /usr/bin/time ccc_mprun ./interpol.exe --mask_src=yes --mask_dst=yes |
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255 | |
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256 | done |
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257 | done |
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258 | |
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259 | ## |
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260 | ## Change all NetCDF files to NetCDF 3 format (needed for OASIS) |
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261 | ## =========================================================================== |
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262 | for InFile in *.nc ; do |
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263 | if [[ $(ncdump -k ${InFile}) = *netCDF-4* ]] ; then |
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264 | mv ${InFile} tmp_${InFile} |
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265 | ncks --fl_fmt=${FL_FMT} -h tmp_${InFile} ${InFile} |
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266 | fi |
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267 | done |
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268 | |
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269 | ## |
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270 | ## Add time axis and coordinates information |
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271 | ## (needed if files need to be read by XIOS) |
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272 | ## =========================================================================== |
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273 | if [[ ${atm} = ico ]] ; then |
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274 | cat <<EOF > add_time.nco |
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275 | defdim("time_counter",1) ; |
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276 | OceFrac [time_counter,cell] = OceFrac (:) ; |
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277 | OceMask [time_counter,cell] = OceMask (:) ; |
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278 | EOF |
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279 | ncap2 -O -h -S add_time.nco ${ATM}_grid_maskFrom_${OCE}.nc tmp_${ATM}_grid_maskFrom_${OCE}.nc ; mv tmp_${ATM}_grid_maskFrom_${OCE}.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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280 | ncks -O --mk_rec time_counter ${ATM}_grid_maskFrom_${OCE}.nc tmp_${ATM}_grid_maskFrom_${OCE}.nc ; mv tmp_${ATM}_grid_maskFrom_${OCE}.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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281 | ncatted -h \ |
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282 | -a coordinates,OceFrac,c,c,"time_counter cell" \ |
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283 | -a coordinates,OceMask,c,c,"time_counter cell" \ |
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284 | -a coordinates,aire,c,c,"time_counter cell" ${ATM}_grid_maskFrom_${OCE}.nc |
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285 | fi |
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286 | if [[ ${atm} = lmd ]] ; then |
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287 | cat <<EOF > add_time.nco |
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288 | defdim("time_counter",1) ; |
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289 | OceFrac [time_counter,lat,lon] = OceFrac (:,:) ; |
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290 | OceMask [time_counter,lat,lon] = OceMask (:,:) ; |
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291 | EOF |
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292 | ncap2 -O -h -S add_time.nco ${ATM}_grid_maskFrom_${OCE}.nc tmp_${ATM}_grid_maskFrom_${OCE}.nc ; mv tmp_${ATM}_grid_maskFrom_${OCE}.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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293 | ncks -O --mk_rec time_counter ${ATM}_grid_maskFrom_${OCE}.nc tmp_${ATM}_grid_maskFrom_${OCE}.nc ; mv tmp_${ATM}_grid_maskFrom_${OCE}.nc ${ATM}_grid_maskFrom_${OCE}.nc |
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294 | ncatted -h \ |
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295 | -a coordinates,OceFrac,c,c,"time_counter lat lon" \ |
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296 | -a coordinates,OceMask,c,c,"time_counter lat lon" \ |
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297 | -a coordinates,aire,c,c,"time_counter lat lon" ${ATM}_grid_maskFrom_${OCE}.nc |
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298 | fi |
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299 | |
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300 | ## |
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301 | ## Add some information in file headers |
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302 | ## =========================================================================== |
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303 | |
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304 | UUID=$(uuid) |
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305 | NCO="$(ncks --version |& tail -1|sed 's/ncks //')" |
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306 | PYTHON_VER=$( python -i -c "import sys ; print (sys.version.split(' ')[0])" ) |
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307 | for InFile in *${oce}_to_*${atm}_*.nc *${atm}_to_*${oce}_*.nc ${ATM}_grid_maskFrom_${OCE}.nc ; do |
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308 | ncatted -h \ |
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309 | --attribute uuid,global,d,, \ |
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310 | --attribute LongName,global,d,, \ |
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311 | --attribute nco_openmp_thread_number,global,d,, \ |
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312 | --attribute Conventions,global,o,c,"CF-1.6" \ |
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313 | --attribute source,global,o,c,"IPSL Earth system model" \ |
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314 | --attribute group,global,o,c,"ICMC IPSL Climate Modelling Center" \ |
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315 | --attribute Institution,global,o,c,"IPSL https://www.ipsl.fr" \ |
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316 | --attribute Ocean,global,o,c,"${OCE} https://www.nemo-ocean.eu" \ |
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317 | --attribute Atmosphere,global,o,c,"${ATM} http://lmdz.lmd.jussieu.fr" \ |
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318 | --attribute production,global,o,c,"$(finger ${LOGNAME} | head -1 | awk '{print $4, $5}') " \ |
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319 | --attribute originalFiles,global,o,c,"${OCE}_coordinates_mask.nc ${ATM}_grid_mask.nc" \ |
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320 | --attribute associatedFiles,global,o,c,"grids_${OCE}x${ATM}.nc areas_${OCE}x${ATM}.nc masks_${OCE}x${ATM}.nc" \ |
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321 | --attribute directory,global,o,c,"$(pwd)" \ |
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322 | --attribute description,global,o,c,"Fields needed by OASIS-MCT" \ |
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323 | --attribute title,global,o,c,"${InFile}.nc" \ |
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324 | --attribute Program,global,o,c,"Generated by ${PROGRAM}" \ |
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325 | --attribute timeStamp,global,o,c,"$(date)" \ |
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326 | --attribute uuid,global,o,c,"${UUID}" \ |
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327 | --attribute HOSTNAME,global,o,c,"$(hostname)" \ |
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328 | --attribute LOGNAME,global,o,c,"$(whoami)" \ |
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329 | --attribute NCO,global,o,c,"NCO netCDF Operator ${NCO} http://nco.sourceforge.net" \ |
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330 | --attribute Python,global,o,c,"Python version ${PYTHON_VER}" \ |
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331 | --attribute OS,global,o,c,"$(uname -o)" \ |
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332 | --attribute release,global,o,c,"$(uname -r)" \ |
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333 | --attribute hardware,global,o,c,"$(uname -i)" \ |
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334 | --attribute directory,global,o,c,"$(pwd)" \ |
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335 | --attribute description,global,o,c,"Generated with XIOS http://forge.ipsl.jussieu.fr/ioserver and MOSAIX https://forge.ipsl.jussieu.fr/igcmg/browser/TOOLS/MOSAIX" \ |
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336 | --attribute Comment,global,o,c,"Preliminary attempt - Do not trust !" \ |
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337 | --attribute SVN_Author,global,o,c,"$Author: omamce $" \ |
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338 | --attribute SVN_Date,global,o,c,"$Date: 2018-03-12 11:17:59 +0100 (Mon, 12 Mar 2018) $" \ |
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339 | --attribute SVN_Revision,global,o,c,"$Revision: 3625 $" \ |
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340 | --attribute SVN_Id,global,o,c,"$Id: CreateWeightsMask.bash 3625 2018-03-12 10:17:59Z omamce $" \ |
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341 | --attribute SVN_Log,global,o,c,"$Log: $" \ |
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342 | ${InFile} |
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343 | done |
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344 | |
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345 | |
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346 | ## |
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347 | ## Update and complete weights file to fit OASIS requested format |
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348 | ## =========================================================================== |
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349 | cat <<EOF > add_dim.nco |
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350 | defdim("num_wgts",1) ; |
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351 | weight[n_weight, num_wgts] = weight ; |
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352 | EOF |
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353 | |
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354 | for file in rmp_*${oce}_to_*${atm}_*.nc rmp_*${atm}_to_*${oce}_*.nc ; do |
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355 | mv ${file} xios_${file} |
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356 | ncap2 --fl_fmt=${FL_FMT} -h --script-file add_dim.nco xios_${file} ${file} |
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357 | |
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358 | ncrename -h --dimension n_weight,num_links ${file} |
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359 | ncrename -h --variable src_idx,src_address ${file} |
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360 | ncrename -h --variable dst_idx,dst_address ${file} |
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361 | ncrename -h --variable weight,remap_matrix ${file} |
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362 | case ${file} in |
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363 | ( *1storder.nc ) ncatted -h --attribute map_method,global,o,c,"Conservative Remapping - 1st order" ${file} ;; |
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364 | ( *2ndorder.nc ) ncatted -h --attribute map_method,global,o,c,"Conservative Remapping - 2nd order" ${file} ;; |
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365 | esac |
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366 | ncatted -h --attribute conventions,global,o,c,"SCRIP" ${file} |
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367 | ncatted -h --attribute normalization,global,o,c,"none" ${file} |
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368 | |
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369 | case ${file} in |
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370 | ( rmp_*${oce}_to_t${atm}_* ) |
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371 | ncatted -h \ |
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372 | --attribute title,global,o,c,"Weights ${OCE} to ${ATM}" \ |
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373 | --attribute source_grid,global,o,c,"${oce_domain_type}" \ |
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374 | --attribute dest_grid,global,o,c,"${atm_domain_type}" \ |
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375 | ${file} |
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376 | ;; |
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377 | ( rmp_*${atm}_to_*${oce}_* ) |
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378 | ncatted -h \ |
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379 | --attribute title,global,o,c,"Weights ${ATM} to ${OCE}" \ |
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380 | --attribute source_grid,global,o,c,"${atm_domain_type}" \ |
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381 | --attribute dest_grid,global,o,c,"${oce_domain_type}" \ |
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382 | ${file} |
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383 | ;; |
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384 | esac |
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385 | done |
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386 | |
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387 | ## |
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388 | ## Save results |
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389 | ## =========================================================================== |
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390 | cp ${ATM}_grid_maskFrom_${OCE}.nc ${SUBMIT_DIR} |
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391 | for order in ${Listorder} |
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392 | do |
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393 | cp dia_t${oce}_to_t${atm}_${order}order.nc ${SUBMIT_DIR}/dia_t${OCE}_to_t${ATM}_${order}order.nc |
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394 | cp rmp_t${oce}_to_t${atm}_${order}order.nc ${SUBMIT_DIR}/rmp_t${OCE}_to_t${ATM}_${order}order.nc |
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395 | for grid in ${Listocegrid} ; do |
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396 | cp rmp_t${atm}_to_${grid}${oce}_${order}order.nc ${SUBMIT_DIR}/rmp_t${ATM}_to_${grid}${OCE}_${order}order.nc |
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397 | cp dia_t${atm}_to_${grid}${oce}_${order}order.nc ${SUBMIT_DIR}/dia_t${ATM}_to_${grid}${OCE}_${order}order.nc |
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398 | done |
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399 | done |
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400 | |
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401 | ## |
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402 | ## Creates and save auxiliary files for OASIS |
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403 | ## =========================================================================== |
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404 | bash ${SUBMIT_DIR}/CreateOasisGrids.bash --oce ${OCE} --atm ${ATM} |
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405 | |
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406 | cp areas_${OCE}x${ATM}.nc ${SUBMIT_DIR} |
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407 | cp grids_${OCE}x${ATM}.nc ${SUBMIT_DIR} |
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408 | cp masks_${OCE}x${ATM}.nc ${SUBMIT_DIR} |
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409 | |
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410 | |
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411 | ## =========================================================================== |
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412 | ## |
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413 | ## That's all folk's !!! |
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414 | ## |
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415 | ## =========================================================================== |
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416 | |
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