Changeset 3435


Ignore:
Timestamp:
10/23/17 15:39:29 (4 years ago)
Author:
cetlod
Message:

NEMO_v6: update card & drivers

Location:
CONFIG/UNIFORM/v6/NEMO_v6
Files:
14 edited

Legend:

Unmodified
Added
Removed
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA1_LIM3_PISCES/clim/COMP/opa9.card

    r3413 r3435  
    5353 
    5454[ParametersFiles] 
    55 List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                        , namelist_ref        ), \ 
    56         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml          , iodef.xml           ), \ 
    57         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml   , context_nemo.xml    ), \ 
    58         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml, domain_def_nemo.xml ), \ 
    59         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml  , axis_def_nemo.xml   ), \ 
    60         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml , grids_def_nemo.xml  ), \ 
    61         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo.xml , field_def_nemo.xml  ), \ 
    62         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/ping_ocean.xml     , ping_ocean.xml      ), \ 
    63         (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg                      , namelist_cfg        ), \ 
    64         (${SUBMIT_DIR}/PARAM/file_def_nemo-opa.xml                                    , file_def_nemo-opa.xml   ) 
     55List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                            , namelist_ref        ), \ 
     56        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml              , iodef.xml           ), \ 
     57        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml       , context_nemo.xml    ), \ 
     58        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml    , domain_def_nemo.xml ), \ 
     59        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml      , axis_def_nemo.xml   ), \ 
     60        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml     , grids_def_nemo.xml  ), \ 
     61        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml  ), \ 
     62        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/ping_ocean.xml         , ping_ocean.xml      ), \ 
     63        (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg                          , namelist_cfg        ), \ 
     64        (${SUBMIT_DIR}/PARAM/file_def_nemo-opa.xml                                        , file_def_nemo-opa.xml   ) 
    6565 
    6666 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA1_OFF_PISCES/ia/COMP/pisces.card

    r3414 r3435  
    5656        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml              , axis_def_nemo.xml             ), \ 
    5757        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml             , grids_def_nemo.xml            ), \ 
    58         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo.xml             , field_def_nemo.xml            ), \ 
     58        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml         , field_def_nemo-opa.xml        ), \ 
    5959        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml      , field_def_nemo-pisces.xml     ), \ 
    6060        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-inerttracer.xml , field_def_nemo-inerttracer.xml), \ 
     
    7171List=   (ocean.output, namelist_cfg, namelist_top_cfg, namelist_pisces_cfg, tracer.stat) 
    7272 
     73 
    7374[OutputFiles] 
    74 List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , Post_1Y_ptrc_T   ) , \ 
    75         (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , Post_1Y_diad_T   ) , \ 
     75List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , NONE   ) , \ 
     76        (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , NONE   ) , \ 
     77        (${config_UserChoices_JobName}_1y_bioscalar.nc     , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_bioscalar.nc , NONE) , \ 
     78        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    7679        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , Post_1M_ptrc_T   ) , \ 
    7780        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , Post_1M_diad_T   ) , \ 
    78         (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , Post_1D_bioscalar) 
     81        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7982 
    8083 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_LIM3_PISCES/clim/COMP/lim3.card

    r3174 r3435  
    2828 
    2929[OutputFiles] 
    30 List=   (${config_UserChoices_JobName}_1m_icemod.nc, ${R_OUT_ICE_O_M}/${PREFIX}_1M_icemod.nc, Post_1M_icemod ), \ 
    31         (${config_UserChoices_JobName}_1d_icemod.nc, ${R_OUT_ICE_O_D}/${PREFIX}_1D_icemod.nc, Post_1D_icemod ) 
     30List=   (${config_UserChoices_JobName}_1m_icemod.nc, ${R_OUT_ICE_O_M}/${PREFIX}_1M_icemod.nc, Post_1M_icemod ) 
    3231 
    3332[Post_1M_icemod] 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_LIM3_PISCES/clim/COMP/opa9.card

    r3176 r3435  
    5151            (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/resto.nc, .) 
    5252 
    53  
    5453[ParametersFiles] 
    55 List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                            , namelist_ref           ), \ 
    56         (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg                          , namelist_cfg           ), \ 
    57         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml ), \ 
    58         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml    , domain_def_nemo.xml    ), \ 
    59         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml       , context_nemo.xml       ), \ 
    60         (${SUBMIT_DIR}/PARAM/file_def_nemo-opa.xml                                        , file_def_nemo-opa.xml  ), \ 
    61         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml              , iodef.xml              ) 
     54List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                            , namelist_ref        ), \ 
     55        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml              , iodef.xml           ), \ 
     56        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml       , context_nemo.xml    ), \ 
     57        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml    , domain_def_nemo.xml ), \ 
     58        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml      , axis_def_nemo.xml   ), \ 
     59        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml     , grids_def_nemo.xml  ), \ 
     60        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml  ), \ 
     61        (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg                          , namelist_cfg        ), \ 
     62        (${SUBMIT_DIR}/PARAM/file_def_nemo-opa.xml                                        , file_def_nemo-opa.xml   ) 
     63 
    6264 
    6365[RestartFiles] 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_LIM3_PISCES/clim/COMP/pisces.card

    r3203 r3435  
    55PisFreq=1 
    66Offline_Mode=n 
     7AtmCo2=2.8432e+02 
     8 
    79 
    810[InitialStateFiles] 
     
    4547 
    4648[OutputFiles] 
    47 List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , Post_1Y_ptrc_T   ) , \ 
    48         (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , Post_1Y_diad_T   ) , \ 
     49List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , NONE   ) , \ 
     50        (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , NONE   ) , \ 
     51        (${config_UserChoices_JobName}_1y_bioscalar.nc     , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_bioscalar.nc , NONE) , \ 
    4952        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    5053        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , Post_1M_ptrc_T   ) , \ 
    5154        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , Post_1M_diad_T   ) , \ 
    52         (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , Post_1D_bioscalar) 
     55        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    5356 
    5457 
     
    7477[Post_1M_ptrc_T] 
    7578Patches = () 
    76 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     79GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    7780TimeSeriesVars2D = () 
    7881ChunckJob2D = 50Y 
     
    8386[Post_1M_diad_T] 
    8487Patches = () 
    85 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     88GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    8689TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    8790ChunckJob2D = 50Y 
     
    9295[Post_1Y_ptrc_T] 
    9396Patches = () 
    94 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     97GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    9598TimeSeriesVars2D = () 
    9699ChunckJob2D = OFF 
     
    101104[Post_1Y_diad_T] 
    102105Patches = () 
    103 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     106GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    104107TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    105108ChunckJob2D = 50Y 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_LIM3_PISCES/ia/COMP/lim3.card

    r3174 r3435  
    2828 
    2929[OutputFiles] 
    30 List=   (${config_UserChoices_JobName}_1m_icemod.nc, ${R_OUT_ICE_O_M}/${PREFIX}_1M_icemod.nc, Post_1M_icemod ), \ 
    31         (${config_UserChoices_JobName}_1d_icemod.nc, ${R_OUT_ICE_O_D}/${PREFIX}_1D_icemod.nc, Post_1D_icemod ) 
     30List=   (${config_UserChoices_JobName}_1m_icemod.nc, ${R_OUT_ICE_O_M}/${PREFIX}_1M_icemod.nc, Post_1M_icemod ) 
    3231 
    3332[Post_1M_icemod] 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_LIM3_PISCES/ia/COMP/opa9.card

    r3176 r3435  
    5353 
    5454[ParametersFiles] 
    55 List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                            , namelist_ref           ), \ 
    56         (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg                          , namelist_cfg           ), \ 
    57         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml ), \ 
    58         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml    , domain_def_nemo.xml    ), \ 
    59         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml       , context_nemo.xml       ), \ 
    60         (${SUBMIT_DIR}/PARAM/file_def_nemo-opa.xml                                        , file_def_nemo-opa.xml  ), \ 
    61         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml              , iodef.xml              ) 
     55List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                            , namelist_ref        ), \ 
     56        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml              , iodef.xml           ), \ 
     57        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo.xml       , context_nemo.xml    ), \ 
     58        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml    , domain_def_nemo.xml ), \ 
     59        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml      , axis_def_nemo.xml   ), \ 
     60        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml     , grids_def_nemo.xml  ), \ 
     61        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml , field_def_nemo-opa.xml  ), \ 
     62        (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_cfg                          , namelist_cfg        ), \ 
     63        (${SUBMIT_DIR}/PARAM/file_def_nemo-opa.xml                                        , file_def_nemo-opa.xml   ) 
    6264 
    6365[RestartFiles] 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_LIM3_PISCES/ia/COMP/pisces.card

    r3203 r3435  
    55PisFreq=1 
    66Offline_Mode=n 
     7AtmCo2=2.8432e+02 
    78 
    89[InitialStateFiles] 
     
    2930 
    3031[ParametersFiles] 
    31 List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref                          , namelist_top_ref), \ 
    32         (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref                       , namelist_pisces_ref), \ 
    33         (${SUBMIT_DIR}/PARAM/namelist_top_cfg                                               , namelist_top_cfg), \ 
    34         (${SUBMIT_DIR}/PARAM/namelist_pisces_cfg                                            , namelist_pisces_cfg), \ 
    35         (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml                                       , file_def_nemo-pisces.xml   ), \ 
    36         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml, field_def_nemo-pisces.xml   ) 
     32List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref                           , namelist_top_ref), \ 
     33        (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref                        , namelist_pisces_ref), \ 
     34        (${SUBMIT_DIR}/PARAM/namelist_top_cfg                                                , namelist_top_cfg), \ 
     35        (${SUBMIT_DIR}/PARAM/namelist_pisces_cfg                                             , namelist_pisces_cfg), \ 
     36        (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml                                        , file_def_nemo-pisces.xml   ), \ 
     37        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml , field_def_nemo-pisces.xml   ), \ 
     38        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-inertrc.xml, field_def_nemo-inerttrc.xml   ) 
    3739 
    3840 
     
    4446 
    4547[OutputFiles] 
    46 List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , Post_1Y_ptrc_T   ) , \ 
    47         (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , Post_1Y_diad_T   ) , \ 
     48List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , NONE   ) , \ 
     49        (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , NONE   ) , \ 
     50        (${config_UserChoices_JobName}_1y_bioscalar.nc     , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_bioscalar.nc , NONE) , \ 
    4851        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    4952        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , Post_1M_ptrc_T   ) , \ 
    5053        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , Post_1M_diad_T   ) , \ 
    51         (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , Post_1D_bioscalar) 
     54        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    5255 
    5356 
     
    7376[Post_1M_ptrc_T] 
    7477Patches = () 
    75 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     78GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    7679TimeSeriesVars2D = () 
    7780ChunckJob2D = 50Y 
     
    8285[Post_1M_diad_T] 
    8386Patches = () 
    84 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     87GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    8588TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    8689ChunckJob2D = 50Y 
     
    9194[Post_1Y_ptrc_T] 
    9295Patches = () 
    93 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     96GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    9497TimeSeriesVars2D = () 
    9598ChunckJob2D = OFF 
     
    100103[Post_1Y_diad_T] 
    101104Patches = () 
    102 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     105GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    103106TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    104107ChunckJob2D = 50Y 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_OFF_PISCES/clim/COMP/pisces.card

    r3203 r3435  
    66Offline_Mode=y 
    77PisFreq=4 
     8AtmCo2=2.8432e+02 
     9#================================================================================================== 
     10 
    811R_DYN=${R_BC}/OCE/${config_UserChoices_TagName}/dyna/new 
    912 
     
    1215 
    1316[BoundaryFiles] 
    14 List= (${pisces_UserChoices_R_DYN}/NEMONEW_mesh_mask_v3.6st.nc, mesh_mask.nc), \ 
    15       (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_T.nc, dyna_grid_T.nc), \ 
    16       (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_U.nc, dyna_grid_U.nc), \ 
    17       (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_V.nc, dyna_grid_V.nc), \ 
    18       (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_W.nc, dyna_grid_W.nc) 
     17List= () 
    1918 
    20 ListNonDel= (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     19 
     20ListNonDel= (${pisces_UserChoices_R_DYN}/NEMONEW_mesh_mask_v3.6st.nc, mask.nc), \ 
     21            (${pisces_UserChoices_R_DYN}/NEMONEW_mesh_mask_v3.6st.nc, mesh_hgr.nc), \ 
     22            (${pisces_UserChoices_R_DYN}/NEMONEW_mesh_mask_v3.6st.nc, mesh_zgr.nc), \ 
     23            (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_T.nc, dyna_grid_T.nc), \ 
     24            (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_U.nc, dyna_grid_U.nc), \ 
     25            (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_V.nc, dyna_grid_V.nc), \ 
     26            (${pisces_UserChoices_R_DYN}/NEMONEW_5d_20920101_20921231_grid_W.nc, dyna_grid_W.nc), \   
     27            (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    2128            (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/TALK_GLODAPv2.1_annual_r360x180xl31.nc, data_ALK_nomask.nc ), \ 
    2229            (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/O2_WOA2009_monthly_r360x180xl31.nc    , data_OXY_nomask.nc ), \ 
     
    3441            (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/solubility1_T62-ORCA2_Mahowald.nc       , solubility.orca.nc) 
    3542 
     43 
    3644[ParametersFiles] 
    37 List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                              , namelist_ref              ), \ 
    38         (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref                          , namelist_top_ref          ), \ 
    39         (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref                       , namelist_pisces_ref       ), \ 
    40         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml      , domain_def_nemo.xml       ), \ 
    41         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo_offline.xml , context_nemo.xml          ), \ 
    42         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml   , field_def_nemo-opa.xml    ), \ 
    43         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml, field_def_nemo-pisces.xml ), \ 
    44         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml                , iodef.xml                 ), \ 
    45         (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_offline_cfg                    , namelist_cfg              ), \ 
    46         (${SUBMIT_DIR}/PARAM/namelist_top_cfg                                               , namelist_top_cfg          ), \ 
    47         (${SUBMIT_DIR}/PARAM/namelist_pisces_cfg                                            , namelist_pisces_cfg       ), \ 
    48         (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml                                       , file_def_nemo-pisces.xml  ) 
     45List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                                    , namelist_ref                  ), \ 
     46        (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref                                , namelist_top_ref              ), \ 
     47        (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref                             , namelist_pisces_ref           ), \ 
     48        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo_offline.xml       , context_nemo.xml              ), \ 
     49        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml            , domain_def_nemo.xml           ), \ 
     50        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml              , axis_def_nemo.xml             ), \ 
     51        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml             , grids_def_nemo.xml            ), \ 
     52        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml         , field_def_nemo-opa.xml        ), \ 
     53        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml      , field_def_nemo-pisces.xml     ), \ 
     54        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-inerttracer.xml , field_def_nemo-inerttracer.xml), \ 
     55        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml                      , iodef.xml                     ), \ 
     56        (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_offline_cfg                          , namelist_cfg                  ), \ 
     57        (${SUBMIT_DIR}/PARAM/namelist_top_cfg                                                     , namelist_top_cfg              ), \ 
     58        (${SUBMIT_DIR}/PARAM/namelist_pisces_cfg                                                  , namelist_pisces_cfg           ), \ 
     59        (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml                                             , file_def_nemo-pisces.xml      ) 
    4960 
    5061 
     
    5667 
    5768[OutputFiles] 
    58 List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , Post_1Y_ptrc_T   ) , \ 
    59         (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , Post_1Y_diad_T   ) , \ 
     69List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , NONE   ) , \ 
     70        (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , NONE   ) , \ 
     71        (${config_UserChoices_JobName}_1y_bioscalar.nc     , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_bioscalar.nc , NONE) , \ 
    6072        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    6173        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , Post_1M_ptrc_T   ) , \ 
    6274        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , Post_1M_diad_T   ) , \ 
    63         (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , Post_1D_bioscalar) 
     75        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    6476 
    6577 
     
    8597[Post_1M_ptrc_T] 
    8698Patches = () 
    87 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     99GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    88100TimeSeriesVars2D = () 
    89101ChunckJob2D = 50Y 
     
    94106[Post_1M_diad_T] 
    95107Patches = () 
    96 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     108GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    97109TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    98110ChunckJob2D = 50Y 
     
    103115[Post_1Y_ptrc_T] 
    104116Patches = () 
    105 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     117GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    106118TimeSeriesVars2D = () 
    107119ChunckJob2D = OFF 
     
    112124[Post_1Y_diad_T] 
    113125Patches = () 
    114 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     126GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    115127TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    116128ChunckJob2D = 50Y 
  • CONFIG/UNIFORM/v6/NEMO_v6/EXPERIMENTS/ORCA2_OFF_PISCES/ia/COMP/pisces.card

    r3203 r3435  
    66Offline_Mode=y 
    77PisFreq=4 
     8AtmCo2=2.8432e+02 
     9 
     10#================================================================================================== 
    811R_DYN=/ccc/store/cont003/dsm/p86caub/dmf_import/IGCM_OUT/IPSLCM5A/PROD/piControl/piControl2/OCE/Output/MO 
     12DynName=piControl2 
     13DynFreq=1M 
     14DynFiles=(grid_T grid_U grid_V grid_W) 
     15DynRunName=dyna 
     16DynYearStart=1850 
     17DynYearEnd=2000 
    918 
    1019[InitialStateFiles] 
     
    1221 
    1322[BoundaryFiles] 
    14 List= (${R_BC}/OCE/${config_UserChoices_TagName}/dyna/cmip5/piControl2_mesh_mask_v36st.nc, mesh_mask.nc), \ 
    15       (${pisces_UserChoices_R_DYN}/piControl2_${year_m1}0101_${year_m1}1231_1M_grid_T.nc, dyna_grid_T_y${year_m1}.nc),  \ 
    16       (${pisces_UserChoices_R_DYN}/piControl2_${year_m1}0101_${year_m1}1231_1M_grid_U.nc, dyna_grid_U_y${year_m1}.nc),  \ 
    17       (${pisces_UserChoices_R_DYN}/piControl2_${year_m1}0101_${year_m1}1231_1M_grid_V.nc, dyna_grid_V_y${year_m1}.nc),  \ 
    18       (${pisces_UserChoices_R_DYN}/piControl2_${year_m1}0101_${year_m1}1231_1M_grid_W.nc, dyna_grid_W_y${year_m1}.nc),  \ 
    19       (${pisces_UserChoices_R_DYN}/piControl2_${year}0101_${year}1231_1M_grid_T.nc, dyna_grid_T_y${year}.nc),  \ 
    20       (${pisces_UserChoices_R_DYN}/piControl2_${year}0101_${year}1231_1M_grid_U.nc, dyna_grid_U_y${year}.nc),  \ 
    21       (${pisces_UserChoices_R_DYN}/piControl2_${year}0101_${year}1231_1M_grid_V.nc, dyna_grid_V_y${year}.nc),  \ 
    22       (${pisces_UserChoices_R_DYN}/piControl2_${year}0101_${year}1231_1M_grid_W.nc, dyna_grid_W_y${year}.nc),  \ 
    23       (${pisces_UserChoices_R_DYN}/piControl2_${year_p1}0101_${year_p1}1231_1M_grid_T.nc, dyna_grid_T_y${year_p1}.nc),  \ 
    24       (${pisces_UserChoices_R_DYN}/piControl2_${year_p1}0101_${year_p1}1231_1M_grid_U.nc, dyna_grid_U_y${year_p1}.nc),  \ 
    25       (${pisces_UserChoices_R_DYN}/piControl2_${year_p1}0101_${year_p1}1231_1M_grid_V.nc, dyna_grid_V_y${year_p1}.nc),  \ 
    26       (${pisces_UserChoices_R_DYN}/piControl2_${year_p1}0101_${year_p1}1231_1M_grid_W.nc, dyna_grid_W_y${year_p1}.nc),  \ 
     23List= () 
    2724 
    2825 
    29 ListNonDel= (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
    30             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/TALK_GLODAPv2.1_annual_r360x180xl31.nc, data_ALK_nomask.nc ), \ 
    31             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/O2_WOA2009_monthly_r360x180xl31.nc    , data_OXY_nomask.nc ), \ 
    32             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/PO4_WOA2009_monthly_r360x180xl31.nc   , data_PO4_nomask.nc ), \ 
    33             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Si_WOA2009_monthly_r360x180xl31.nc    , data_SIL_nomask.nc ), \ 
    34             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/DOC_PISCES_monthly_r360x180xl31.nc    , data_DOC_nomask.nc ), \ 
    35             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/Fer_PISCES_monthly_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
    36             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/NO3_WOA2009_monthly_r360x180xl31.nc   , data_NO3_nomask.nc ), \ 
    37             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/weights_3D_r360x180_orca2_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
    38             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/DUST_INCA_MONTHLY_2000_2006_orca2.nc    , dust.orca.nc)       , \ 
    39             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/bathy.orca.nc                           , bathy.orca.nc)      , \ 
    40             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/rivernew_OA_orca2.nc                    , river.orca.nc)      , \ 
    41             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/duce2k.nomask.nc                        , ndeposition.orca.nc), \ 
    42             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/par_fraction_gewex_orca_r2_clim90s00s.nc, par.orca.nc)        , \ 
    43             (${R_BC}/OCE/${config_UserChoices_TagName}/${opa9_UserChoices_OPA_version}/solubility1_T62-ORCA2_Mahowald.nc       , solubility.orca.nc) 
     26ListNonDel= (${R_BC}/OCE/${config_UserChoices_TagName}/dyna/cmip5/piControl2_mesh_mask_v36st.nc, mask.nc), \ 
     27            (${R_BC}/OCE/${config_UserChoices_TagName}/dyna/cmip5/piControl2_mesh_mask_v36st.nc, mesh_hgr.nc), \ 
     28            (${R_BC}/OCE/${config_UserChoices_TagName}/dyna/cmip5/piControl2_mesh_mask_v36st.nc, mesh_zgr.nc), \ 
     29            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/TDIC_GLODAPv2.1_annual_r360x180xl31.nc, data_DIC_nomask.nc ), \ 
     30            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/TALK_GLODAPv2.1_annual_r360x180xl31.nc, data_ALK_nomask.nc ), \ 
     31            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/O2_WOA2009_monthly_r360x180xl31.nc    , data_OXY_nomask.nc ), \ 
     32            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/PO4_WOA2009_monthly_r360x180xl31.nc   , data_PO4_nomask.nc ), \ 
     33            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/Si_WOA2009_monthly_r360x180xl31.nc    , data_SIL_nomask.nc ), \ 
     34            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/DOC_PISCES_monthly_r360x180xl31.nc    , data_DOC_nomask.nc ), \ 
     35            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/Fer_PISCES_monthly_r360x180xl31.nc    , data_FER_nomask.nc ), \ 
     36            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/NO3_WOA2009_monthly_r360x180xl31.nc   , data_NO3_nomask.nc ), \ 
     37            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/weights_3D_r360x180_orca2_bilinear.nc, weights_3D_r360x180_bilin.nc ), \ 
     38            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/DUST_INCA_MONTHLY_2000_2006_orca2.nc    , dust.orca.nc)       , \ 
     39            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/bathy.orca.nc                           , bathy.orca.nc)      , \ 
     40            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/rivernew_OA_orca2.nc                    , river.orca.nc)      , \ 
     41            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/duce2k.nomask.nc                        , ndeposition.orca.nc), \ 
     42            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/par_fraction_gewex_orca_r2_clim90s00s.nc, par.orca.nc)        , \ 
     43            (${R_BC}/OCE/${config_UserChoices_TagName}/${pisces_UserChoices_version}/solubility1_T62-ORCA2_Mahowald.nc       , solubility.orca.nc) 
    4444 
    4545[ParametersFiles] 
    46 List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                              , namelist_ref              ), \ 
    47         (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref                          , namelist_top_ref          ), \ 
    48         (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref                       , namelist_pisces_ref       ), \ 
    49         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml      , domain_def_nemo.xml       ), \ 
    50         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo_offline.xml , context_nemo.xml          ), \ 
    51         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml   , field_def_nemo-opa.xml    ), \ 
    52         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml, field_def_nemo-pisces.xml ), \ 
    53         (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml                , iodef.xml                 ), \ 
    54         (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_offline_cfg                    , namelist_cfg              ), \ 
    55         (${SUBMIT_DIR}/PARAM/namelist_top_cfg                                               , namelist_top_cfg          ), \ 
    56         (${SUBMIT_DIR}/PARAM/namelist_pisces_cfg                                            , namelist_pisces_cfg       ), \ 
    57         (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml                                       , file_def_nemo-pisces.xml  ) 
     46List=   (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_ref                                    , namelist_ref                  ), \ 
     47        (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_top_ref                                , namelist_top_ref              ), \ 
     48        (${MODIPSL}/modeles/NEMOGCM/CONFIG/SHARED/namelist_pisces_ref                             , namelist_pisces_ref           ), \ 
     49        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/context_nemo_offline.xml       , context_nemo.xml              ), \ 
     50        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/domain_def_nemo.xml            , domain_def_nemo.xml           ), \ 
     51        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/axis_def_nemo.xml              , axis_def_nemo.xml             ), \ 
     52        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/grids_def_nemo.xml             , grids_def_nemo.xml            ), \ 
     53        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-opa.xml         , field_def_nemo-opa.xml        ), \ 
     54        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-pisces.xml      , field_def_nemo-pisces.xml     ), \ 
     55        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/field_def_nemo-inerttracer.xml , field_def_nemo-inerttracer.xml), \ 
     56        (${MODIPSL}/modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/EXP00/iodef.xml                      , iodef.xml                     ), \ 
     57        (${SUBMIT_DIR}/PARAM/namelist_${RESOL_OCE}${EXPTYPE}_offline_cfg                          , namelist_cfg                  ), \ 
     58        (${SUBMIT_DIR}/PARAM/namelist_top_cfg                                                     , namelist_top_cfg              ), \ 
     59        (${SUBMIT_DIR}/PARAM/namelist_pisces_cfg                                                  , namelist_pisces_cfg           ), \ 
     60        (${SUBMIT_DIR}/PARAM/file_def_nemo-pisces.xml                                             , file_def_nemo-pisces.xml      ) 
     61 
    5862 
    5963 
     
    6468List=   (namelist_top_ref, namelist_top_cfg, namelist_pisces_ref, namelist_pisces_cfg, tracer.stat) 
    6569 
     70 
    6671[OutputFiles] 
    67 List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , Post_1Y_ptrc_T   ) , \ 
    68         (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , Post_1Y_diad_T   ) , \ 
     72List=   (${config_UserChoices_JobName}_1y_ptrc_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_ptrc_T.nc    , NONE   ) , \ 
     73        (${config_UserChoices_JobName}_1y_diad_T.nc        , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_diad_T.nc    , NONE   ) , \ 
     74        (${config_UserChoices_JobName}_1y_bioscalar.nc     , ${R_OUT_MBG_O_Y}/${PREFIX}_1Y_bioscalar.nc , NONE) , \ 
    6975        (${config_UserChoices_JobName}_1m_bioscalar.nc     , ${R_OUT_MBG_O_M}/${PREFIX}_1M_bioscalar.nc , Post_1M_bioscalar) , \ 
    7076        (${config_UserChoices_JobName}_1m_ptrc_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_ptrc_T.nc    , Post_1M_ptrc_T   ) , \ 
    7177        (${config_UserChoices_JobName}_1m_diad_T.nc        , ${R_OUT_MBG_O_M}/${PREFIX}_1M_diad_T.nc    , Post_1M_diad_T   ) , \ 
    72         (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , Post_1D_bioscalar) 
     78        (${config_UserChoices_JobName}_1d_bioscalar.nc     , ${R_OUT_MBG_O_D}/${PREFIX}_1D_bioscalar.nc , NONE) 
    7379 
    7480 
     
    94100[Post_1M_ptrc_T] 
    95101Patches = () 
    96 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     102GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    97103TimeSeriesVars2D = () 
    98104ChunckJob2D = 50Y 
     
    103109[Post_1M_diad_T] 
    104110Patches = () 
    105 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     111GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    106112TimeSeriesVars2D = (Cflx, Dpco2, EPC100, INTPP) 
    107113ChunckJob2D = 50Y 
     
    112118[Post_1Y_ptrc_T] 
    113119Patches = () 
    114 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     120GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    115121TimeSeriesVars2D = () 
    116122ChunckJob2D = OFF 
     
    121127[Post_1Y_diad_T] 
    122128Patches = () 
    123 GatherWithInternal = (nav_lon, nav_lat, time_counter, time_centered, time_centered_bounds) 
     129GatherWithInternal = (nav_lon, nav_lat, deptht, time_counter, time_centered, time_centered_bounds) 
    124130TimeSeriesVars2D = (Cflx, Dpco2, EPC100, Heup,  Nfix) 
    125131ChunckJob2D = 50Y 
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/DRIVER/lim3.driver

    r2639 r3435  
    1616    IGCM_debug_PushStack "ICE_Update" 
    1717 
    18     NbFreq=$( echo ${config_ICE_WriteFrequency} | wc -w ) 
    1918 
    20     ##--Write Frequency Purpose .... 
    21     typeset -Z1 i=1 
    22     while [ $i -le ${NbFreq} ]; do 
    23         frequency=$( echo ${config_ICE_WriteFrequency} | awk -v var="$i" "-F " '{print $var}' ) 
    24         factor=$( echo ${frequency} | sed -e "s/[yYmMdD]//" ) 
     19    ##--Write Frequency for iomput 
     20    ## Differents frequencies are allowed for ICE files 
     21 
     22    VI1D_ENABLE=".FALSE." 
     23    VI5D_ENABLE=".FALSE." 
     24    VI1M_ENABLE=".FALSE." 
     25    VI1Y_ENABLE=".FALSE." 
     26 
     27    for frequency in ${config_ICE_WriteFrequency} ; do 
    2528        case ${frequency} in 
    26             *Y|*y) 
    27                 eval PREFIX_WFI${i}=${config_UserChoices_JobName}_${factor}y_${DatesPeriod} ; 
    28                 eval R_OUT_ICE_WFI${i}=${R_OUT_ICE_O_Y} ; 
    29                 eval WFI${i}=${factor}Y ;; 
    30             *M|*m) 
    31                 eval PREFIX_WFI${i}=${config_UserChoices_JobName}_${factor}m_${DatesPeriod} ; 
    32                 eval R_OUT_ICE_WFI${i}=${R_OUT_ICE_O_M} ; 
    33                 eval WFI${i}=${factor}M ;; 
    34             *D|*d) 
    35                 eval PREFIX_WFI${i}=${config_UserChoices_JobName}_${factor}d_${DatesPeriod} ; 
    36                 eval R_OUT_ICE_WFI${i}=${R_OUT_ICE_O_D} ; 
    37                 eval WFI${i}=${factor}D ;; 
    38             *) 
     29            ( 1D|1d ) VI1D_ENABLE=".TRUE." ;; 
     30            ( 5D|5d ) VI5D_ENABLE=".TRUE." ;; 
     31            ( 1M|1m ) VI1M_ENABLE=".TRUE." ;; 
     32            ( *[yY] ) VI1Y_ENABLE=".TRUE." ;; 
    3933        esac 
    40         let i=$i+1 
     34    done 
    4135 
    42     done 
     36 
     37  # Update iodef.xml 
     38 
     39    IGCM_debug_Print 1 'Informations into iodef.xml : VI1D_ENABLE VI5D_ENABLE VI1M_ENABLE VI1Y_ENABLE ' 
     40    IGCM_debug_Print 1 ${VI1D_ENABLE}  ${VI5D_ENABLE} ${VI1M_ENABLE} ${VI1Y_ENABLE} 
     41 
     42    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 1d enabled ${VI1D_ENABLE} 
     43    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 5d enabled ${VI5D_ENABLE} 
     44    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 1m enabled ${VI1M_ENABLE} 
     45    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 1y enabled ${VI1Y_ENABLE} 
     46 
    4347    echo UPDATE ICE !!! 
    4448 
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/DRIVER/opa9.driver

    r3408 r3435  
    157157   IGCM_comp_modifyXmlFile nonblocker file_def_nemo-opa.xml 1y enabled ${V1Y_ENABLE} 
    158158         
    159    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 1d enabled ${V1D_ENABLE} 
    160    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 1m enabled ${V1M_ENABLE} 
    161    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-lim.xml 1y enabled ${V1Y_ENABLE} 
    162159 
    163160# update domain_def.xml file  
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/DRIVER/pisces.driver

    r3408 r3435  
    4343    IGCM_debug_PushStack "MBG_Update" 
    4444 
    45     V1D_ENABLE=".FALSE." 
    46     V5D_ENABLE=".FALSE." 
    47     V1M_ENABLE=".FALSE." 
    48     V1Y_ENABLE=".FALSE." 
    49  
    50     for frequency in ${config_OCE_WriteFrequency} ; do 
     45     
     46    ##--Write Frequency for iomput 
     47    ## Differents frequencies are allowed for MBG files 
     48 
     49    VT1D_ENABLE=".FALSE." 
     50    VT5D_ENABLE=".FALSE." 
     51    VT1M_ENABLE=".FALSE." 
     52    VT1Y_ENABLE=".FALSE." 
     53 
     54    for frequency in ${config_MBG_WriteFrequency} ; do 
    5155        case ${frequency} in 
    52             ( 1D|1d ) V1D_ENABLE=".TRUE." ;; 
    53             ( 5D|5d ) V5D_ENABLE=".TRUE." ;; 
    54             ( 1M|1m ) V1M_ENABLE=".TRUE." ;; 
    55             ( *[yY] ) V1Y_ENABLE=".TRUE." ;; 
     56            ( 1D|1d ) VT1D_ENABLE=".TRUE." ;; 
     57            ( 5D|5d ) VT5D_ENABLE=".TRUE." ;; 
     58            ( 1M|1m ) VT1M_ENABLE=".TRUE." ;; 
     59            ( *[yY] ) VT1Y_ENABLE=".TRUE." ;; 
    5660        esac 
    5761    done 
     
    166170   fi 
    167171 
    168    IGCM_comp_modifyNamelist blocker    namelist_top_cfg ln_rsttr  ${TOP_LRSTTR} 
    169    IGCM_comp_modifyNamelist blocker    namelist_top_cfg nn_rsttr  ${TOP_NRSTTR} 
    170    IGCM_comp_modifyNamelist blocker    namelist_pisces_cfg  atcco2    ${pisces_UserChoices_AtmCo2} 
    171    IGCM_comp_modifyNamelist blocker    namelist_pisces_cfg  nn_pisdmp  ${OPA_NPDT_YEAR} 
    172    IGCM_comp_modifyNamelist blocker    namelist_pisces_cfg  nrdttrc    ${pisces_UserChoices_PisFreq} 
    173  
    174  
    175    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 1d enabled ${V1D_ENABLE} 
    176    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 1m enabled ${V1M_ENABLE} 
    177    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 1y enabled ${V1Y_ENABLE} 
     172    ##-- Update namelist_top_cfg and namelist_pisces_cfg 
     173    IGCM_comp_modifyNamelist blocker  namelist_top_cfg     ln_rsttr   ${TOP_LN_RSTR} 
     174    IGCM_comp_modifyNamelist blocker  namelist_top_cfg     nn_rsttr   ${TOP_NN_RSTR} 
     175    IGCM_comp_modifyNamelist blocker  namelist_pisces_cfg  nn_pisdmp  ${OPA_NPDT_YEAR} 
     176  
     177    # Update iodef.xml 
     178 
     179    IGCM_debug_Print 1 'Informations into iodef.xml : VT1D_ENABLE VT5D_ENABLE VT1M_ENABLE VT1Y_ENABLE ' 
     180    IGCM_debug_Print 1 ${VT1D_ENABLE}  ${VT5D_ENABLE} ${VT1M_ENABLE} ${VT1Y_ENABLE} 
     181 
     182    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 1d enabled ${VT1D_ENABLE} 
     183    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 5d enabled ${VT5D_ENABLE} 
     184    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 1m enabled ${VT1M_ENABLE} 
     185    IGCM_comp_modifyXmlFile nonblocker file_def_nemo-pisces.xml 1y enabled ${VT1Y_ENABLE} 
     186 
    178187 
    179188 
  • CONFIG/UNIFORM/v6/NEMO_v6/GENERAL/PARAM/file_def_nemo-pisces.xml

    r3408 r3435  
    7474 
    7575   <file id="file22" name_suffix="_diad_T" description="additional pisces diagnostics" > 
    76        <field field_ref="PH"         name="PH" /> 
    77        <field field_ref="PAR"        name="PAR"   /> 
    78        <field field_ref="PARDM"      name="PARDM"   /> 
    79        <field field_ref="Cflx"       name="Cflx"  /> 
    80         <field field_ref="Oflx"      name="Oflx"  /> 
    81        <field field_ref="Dpco2"      name="Dpco2"   /> 
    82        <field field_ref="Dpo2"       name="Dpo2"   /> 
     76        <field field_ref="PH"         name="PH" /> 
     77        <field field_ref="CO3"        name="CO3" /> 
     78        <field field_ref="CO3sat"     name="CO3sat" /> 
     79        <field field_ref="PAR"        name="PAR"   /> 
     80        <field field_ref="PCAL"       name="PCAL"   /> 
     81        <field field_ref="Cflx"       name="Cflx"  /> 
     82        <field field_ref="Oflx"       name="Oflx"  /> 
     83        <field field_ref="Dpco2"      name="Dpco2"   /> 
     84        <field field_ref="Dpo2"       name="Dpo2"   /> 
    8385        <field field_ref="Heup"      name="Heup"  /> 
    8486        <field field_ref="Irondep"   name="Irondep"  /> 
     
    9294        <field field_ref="LDlight"   name="LDlight"  /> 
    9395        <field field_ref="TPP"       name="TPP"  /> 
    94        <field field_ref="TPNEW"      name="TPNEW"  /> 
     96        <field field_ref="INTPP"     name="INTPP"  /> 
     97        <field field_ref="INTPNEW"     name="INTPNEW"  /> 
     98        <field field_ref="TPNEW"      name="TPNEW"  /> 
    9599        <field field_ref="EPC100"    name="EPC100"  /> 
    96100        <field field_ref="EPFE100"   name="EPFE100"  /> 
    97101        <field field_ref="EPSI100"   name="EPSI100"  /> 
    98102        <field field_ref="EPCAL100"  name="EPCAL100"  /> 
    99         <field field_ref="xfracal"   name="xfracal"  /> 
    100103    </file> 
    101104 
     
    155158 
    156159   <file id="file25" name_suffix="_diad_T" description="additional pisces diagnostics" > 
    157        <field field_ref="PH"         name="PH" /> 
    158        <field field_ref="PAR"        name="PAR"   /> 
    159        <field field_ref="PARDM"      name="PARDM"   /> 
    160        <field field_ref="Cflx"       name="Cflx"  /> 
    161         <field field_ref="Oflx"      name="Oflx"  /> 
    162        <field field_ref="Dpco2"      name="Dpco2"   /> 
    163        <field field_ref="Dpo2"       name="Dpo2"   /> 
     160        <field field_ref="PH"         name="PH" /> 
     161        <field field_ref="CO3"        name="CO3" /> 
     162        <field field_ref="CO3sat"     name="CO3sat" /> 
     163        <field field_ref="PAR"        name="PAR"   /> 
     164        <field field_ref="PCAL"       name="PCAL"   /> 
     165        <field field_ref="Cflx"       name="Cflx"  /> 
     166        <field field_ref="Oflx"       name="Oflx"  /> 
     167        <field field_ref="Dpco2"      name="Dpco2"   /> 
     168        <field field_ref="Dpo2"       name="Dpo2"   /> 
    164169        <field field_ref="Heup"      name="Heup"  /> 
    165170        <field field_ref="Irondep"   name="Irondep"  /> 
     
    173178        <field field_ref="LDlight"   name="LDlight"  /> 
    174179        <field field_ref="TPP"       name="TPP"  /> 
    175        <field field_ref="TPNEW"      name="TPNEW"  /> 
     180        <field field_ref="INTPP"     name="INTPP"  /> 
     181        <field field_ref="INTPNEW"     name="INTPNEW"  /> 
     182        <field field_ref="TPNEW"      name="TPNEW"  /> 
    176183        <field field_ref="EPC100"    name="EPC100"  /> 
    177184        <field field_ref="EPFE100"   name="EPFE100"  /> 
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