1 | #include "context.hpp" |
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2 | #include "attribute_template.hpp" |
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3 | #include "object_template.hpp" |
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4 | #include "group_template.hpp" |
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5 | |
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6 | #include "calendar_type.hpp" |
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7 | #include "duration.hpp" |
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8 | |
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9 | #include "context_client.hpp" |
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10 | #include "context_server.hpp" |
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11 | #include "nc4_data_output.hpp" |
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12 | #include "node_type.hpp" |
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13 | #include "message.hpp" |
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14 | #include "type.hpp" |
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15 | #include "xios_spl.hpp" |
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16 | |
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17 | namespace xios { |
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18 | |
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19 | //shared_ptr<CContextGroup> CContext::root; |
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20 | shared_ptr<CContextGroup> * CContext::root_ptr = 0; |
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21 | |
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22 | /// ////////////////////// Dfinitions ////////////////////// /// |
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23 | |
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24 | CContext::CContext(void) |
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25 | : CObjectTemplate<CContext>(), CContextAttributes() |
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26 | , calendar(), hasClient(false), hasServer(false), isPostProcessed(false), finalized(false) |
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27 | , idServer_(), client(0), server(0) |
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28 | { /* Ne rien faire de plus */ } |
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29 | |
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30 | CContext::CContext(const StdString & id) |
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31 | : CObjectTemplate<CContext>(id), CContextAttributes() |
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32 | , calendar(), hasClient(false), hasServer(false), isPostProcessed(false), finalized(false) |
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33 | , idServer_(), client(0), server(0) |
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34 | { /* Ne rien faire de plus */ } |
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35 | |
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36 | CContext::~CContext(void) |
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37 | { |
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38 | delete client; |
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39 | delete server; |
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40 | } |
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41 | |
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42 | //---------------------------------------------------------------- |
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43 | //! Get name of context |
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44 | StdString CContext::GetName(void) { return (StdString("context")); } |
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45 | StdString CContext::GetDefName(void){ return (CContext::GetName()); } |
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46 | ENodeType CContext::GetType(void) { return (eContext); } |
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47 | |
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48 | //---------------------------------------------------------------- |
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49 | |
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50 | /*! |
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51 | \brief Get context group (context root) |
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52 | \return Context root |
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53 | */ |
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54 | CContextGroup* CContext::getRoot(void) |
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55 | { |
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56 | //if (root.get()==NULL) root=shared_ptr<CContextGroup>(new CContextGroup(xml::CXMLNode::GetRootName())); |
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57 | //return root.get(); |
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58 | |
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59 | //static shared_ptr<CContextGroup> *root_ptr; |
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60 | if(root_ptr == 0) //root_ptr = new shared_ptr<CContextGroup>; |
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61 | // if (root_ptr->get()==NULL) |
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62 | root_ptr = new shared_ptr<CContextGroup>(new CContextGroup(xml::CXMLNode::GetRootName())); |
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63 | return root_ptr->get(); |
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64 | } |
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65 | |
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66 | //---------------------------------------------------------------- |
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67 | |
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68 | /*! |
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69 | \brief Get calendar of a context |
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70 | \return Calendar |
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71 | */ |
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72 | boost::shared_ptr<CCalendar> CContext::getCalendar(void) const |
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73 | { |
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74 | return (this->calendar); |
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75 | } |
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76 | |
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77 | //---------------------------------------------------------------- |
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78 | |
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79 | /*! |
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80 | \brief Set a context with a calendar |
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81 | \param[in] newCalendar new calendar |
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82 | */ |
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83 | void CContext::setCalendar(boost::shared_ptr<CCalendar> newCalendar) |
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84 | { |
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85 | this->calendar = newCalendar; |
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86 | } |
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87 | |
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88 | //---------------------------------------------------------------- |
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89 | /*! |
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90 | \brief Parse xml file and write information into context object |
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91 | \param [in] node xmld node corresponding in xml file |
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92 | */ |
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93 | void CContext::parse(xml::CXMLNode & node) |
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94 | { |
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95 | CContext::SuperClass::parse(node); |
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96 | |
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97 | // PARSING POUR GESTION DES ENFANTS |
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98 | xml::THashAttributes attributes = node.getAttributes(); |
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99 | |
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100 | if (attributes.end() != attributes.find("src")) |
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101 | { |
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102 | StdIFStream ifs ( attributes["src"].c_str() , StdIFStream::in ); |
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103 | if ( (ifs.rdstate() & std::ifstream::failbit ) != 0 ) |
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104 | ERROR("void CContext::parse(xml::CXMLNode & node)", |
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105 | <<endl<< "Can not open <"<<attributes["src"].c_str()<<"> file" ); |
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106 | if (!ifs.good()) |
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107 | ERROR("CContext::parse(xml::CXMLNode & node)", |
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108 | << "[ filename = " << attributes["src"] << " ] Bad xml stream !"); |
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109 | xml::CXMLParser::ParseInclude(ifs, attributes["src"], *this); |
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110 | } |
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111 | |
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112 | if (node.getElementName().compare(CContext::GetName())) |
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113 | DEBUG("Le noeud is wrong defined but will be considered as a context !"); |
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114 | |
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115 | if (!(node.goToChildElement())) |
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116 | { |
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117 | DEBUG("Le context ne contient pas d'enfant !"); |
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118 | } |
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119 | else |
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120 | { |
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121 | do { // Parcours des contextes pour traitement. |
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122 | |
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123 | StdString name = node.getElementName(); |
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124 | attributes.clear(); |
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125 | attributes = node.getAttributes(); |
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126 | |
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127 | if (attributes.end() != attributes.find("id")) |
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128 | { |
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129 | DEBUG(<< "Definition node has an id," |
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130 | << "it will not be taking account !"); |
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131 | } |
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132 | |
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133 | #define DECLARE_NODE(Name_, name_) \ |
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134 | if (name.compare(C##Name_##Definition::GetDefName()) == 0) \ |
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135 | { C##Name_##Definition::create(C##Name_##Definition::GetDefName()) -> parse(node); continue; } |
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136 | #define DECLARE_NODE_PAR(Name_, name_) |
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137 | #include "node_type.conf" |
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138 | |
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139 | DEBUG(<< "The element \'" << name |
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140 | << "\' in the context \'" << CContext::getCurrent()->getId() |
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141 | << "\' is not a definition !"); |
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142 | |
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143 | } while (node.goToNextElement()); |
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144 | |
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145 | node.goToParentElement(); // Retour au parent |
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146 | } |
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147 | } |
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148 | |
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149 | //---------------------------------------------------------------- |
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150 | //! Show tree structure of context |
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151 | void CContext::ShowTree(StdOStream & out) |
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152 | { |
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153 | StdString currentContextId = CContext::getCurrent() -> getId(); |
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154 | std::vector<CContext*> def_vector = |
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155 | CContext::getRoot()->getChildList(); |
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156 | std::vector<CContext*>::iterator |
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157 | it = def_vector.begin(), end = def_vector.end(); |
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158 | |
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159 | out << "<? xml version=\"1.0\" ?>" << std::endl; |
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160 | out << "<" << xml::CXMLNode::GetRootName() << " >" << std::endl; |
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161 | |
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162 | for (; it != end; it++) |
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163 | { |
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164 | CContext* context = *it; |
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165 | CContext::setCurrent(context->getId()); |
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166 | out << *context << std::endl; |
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167 | } |
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168 | |
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169 | out << "</" << xml::CXMLNode::GetRootName() << " >" << std::endl; |
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170 | CContext::setCurrent(currentContextId); |
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171 | } |
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172 | |
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173 | |
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174 | //---------------------------------------------------------------- |
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175 | |
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176 | //! Convert context object into string (to print) |
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177 | StdString CContext::toString(void) const |
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178 | { |
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179 | StdOStringStream oss; |
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180 | oss << "<" << CContext::GetName() |
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181 | << " id=\"" << this->getId() << "\" " |
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182 | << SuperClassAttribute::toString() << ">" << std::endl; |
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183 | if (!this->hasChild()) |
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184 | { |
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185 | //oss << "<!-- No definition -->" << std::endl; // fait planter l'incrmentation |
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186 | } |
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187 | else |
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188 | { |
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189 | |
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190 | #define DECLARE_NODE(Name_, name_) \ |
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191 | if (C##Name_##Definition::has(C##Name_##Definition::GetDefName())) \ |
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192 | oss << * C##Name_##Definition::get(C##Name_##Definition::GetDefName()) << std::endl; |
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193 | #define DECLARE_NODE_PAR(Name_, name_) |
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194 | #include "node_type.conf" |
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195 | |
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196 | } |
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197 | |
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198 | oss << "</" << CContext::GetName() << " >"; |
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199 | |
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200 | return (oss.str()); |
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201 | } |
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202 | |
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203 | //---------------------------------------------------------------- |
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204 | |
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205 | /*! |
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206 | \brief Find all inheritace among objects in a context. |
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207 | \param [in] apply (true) write attributes of parent into ones of child if they are empty |
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208 | (false) write attributes of parent into a new container of child |
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209 | \param [in] parent unused |
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210 | */ |
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211 | void CContext::solveDescInheritance(bool apply, const CAttributeMap * const UNUSED(parent)) |
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212 | { |
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213 | #define DECLARE_NODE(Name_, name_) \ |
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214 | if (C##Name_##Definition::has(C##Name_##Definition::GetDefName())) \ |
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215 | C##Name_##Definition::get(C##Name_##Definition::GetDefName())->solveDescInheritance(apply); |
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216 | #define DECLARE_NODE_PAR(Name_, name_) |
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217 | #include "node_type.conf" |
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218 | } |
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219 | |
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220 | //---------------------------------------------------------------- |
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221 | |
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222 | //! Verify if all root definition in the context have child. |
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223 | bool CContext::hasChild(void) const |
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224 | { |
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225 | return ( |
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226 | #define DECLARE_NODE(Name_, name_) \ |
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227 | C##Name_##Definition::has(C##Name_##Definition::GetDefName()) || |
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228 | #define DECLARE_NODE_PAR(Name_, name_) |
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229 | #include "node_type.conf" |
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230 | false); |
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231 | } |
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232 | |
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233 | //---------------------------------------------------------------- |
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234 | |
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235 | void CContext::CleanTree(void) |
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236 | { |
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237 | #define DECLARE_NODE(Name_, name_) C##Name_##Definition::ClearAllAttributes(); |
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238 | #define DECLARE_NODE_PAR(Name_, name_) |
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239 | #include "node_type.conf" |
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240 | } |
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241 | ///--------------------------------------------------------------- |
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242 | |
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243 | //! Initialize client side |
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244 | void CContext::initClient(ep_lib::MPI_Comm intraComm, ep_lib::MPI_Comm interComm, CContext* cxtServer /*= 0*/) |
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245 | { |
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246 | hasClient=true; |
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247 | client = new CContextClient(this, intraComm, interComm, cxtServer); |
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248 | |
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249 | int tmp_rank; |
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250 | MPI_Comm_rank(intraComm, &tmp_rank); |
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251 | MPI_Barrier(intraComm); |
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252 | |
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253 | |
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254 | registryIn=new CRegistry(intraComm); |
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255 | registryIn->setPath(getId()) ; |
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256 | if (client->clientRank==0) registryIn->fromFile("xios_registry.bin") ; |
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257 | registryIn->bcastRegistry() ; |
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258 | |
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259 | registryOut=new CRegistry(intraComm) ; |
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260 | registryOut->setPath(getId()) ; |
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261 | |
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262 | ep_lib::MPI_Comm intraCommServer, interCommServer; |
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263 | if (cxtServer) // Attached mode |
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264 | { |
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265 | intraCommServer = intraComm; |
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266 | interCommServer = interComm; |
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267 | } |
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268 | else |
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269 | { |
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270 | MPI_Comm_dup(intraComm, &intraCommServer); |
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271 | comms.push_back(intraCommServer); |
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272 | MPI_Comm_dup(interComm, &interCommServer); |
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273 | comms.push_back(interCommServer); |
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274 | } |
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275 | server = new CContextServer(this,intraCommServer,interCommServer); |
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276 | } |
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277 | |
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278 | void CContext::setClientServerBuffer() |
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279 | { |
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280 | size_t minBufferSize = CXios::minBufferSize; |
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281 | #define DECLARE_NODE(Name_, name_) \ |
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282 | if (minBufferSize < sizeof(C##Name_##Definition)) minBufferSize = sizeof(C##Name_##Definition); |
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283 | #define DECLARE_NODE_PAR(Name_, name_) |
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284 | #include "node_type.conf" |
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285 | #undef DECLARE_NODE |
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286 | #undef DECLARE_NODE_PAR |
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287 | |
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288 | std::map<int, StdSize> maxEventSize; |
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289 | std::map<int, StdSize> bufferSize = getAttributesBufferSize(maxEventSize); |
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290 | std::map<int, StdSize> dataBufferSize = getDataBufferSize(maxEventSize); |
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291 | |
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292 | std::map<int, StdSize>::iterator it, ite = dataBufferSize.end(); |
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293 | for (it = dataBufferSize.begin(); it != ite; ++it) |
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294 | if (it->second > bufferSize[it->first]) bufferSize[it->first] = it->second; |
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295 | |
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296 | ite = bufferSize.end(); |
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297 | for (it = bufferSize.begin(); it != ite; ++it) |
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298 | { |
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299 | it->second *= CXios::bufferSizeFactor; |
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300 | if (it->second < minBufferSize) it->second = minBufferSize; |
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301 | } |
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302 | |
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303 | // We consider that the minimum buffer size is also the minimum event size |
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304 | ite = maxEventSize.end(); |
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305 | for (it = maxEventSize.begin(); it != ite; ++it) |
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306 | if (it->second < minBufferSize) it->second = minBufferSize; |
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307 | |
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308 | if (client->isServerLeader()) |
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309 | { |
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310 | const std::list<int>& ranks = client->getRanksServerLeader(); |
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311 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
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312 | if (!bufferSize.count(*itRank)) bufferSize[*itRank] = maxEventSize[*itRank] = minBufferSize; |
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313 | } |
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314 | |
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315 | client->setBufferSize(bufferSize, maxEventSize); |
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316 | } |
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317 | |
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318 | //! Verify whether a context is initialized |
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319 | bool CContext::isInitialized(void) |
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320 | { |
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321 | return hasClient; |
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322 | } |
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323 | |
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324 | //! Initialize server |
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325 | void CContext::initServer(ep_lib::MPI_Comm intraComm, ep_lib::MPI_Comm interComm, CContext* cxtClient /*= 0*/) |
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326 | { |
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327 | hasServer=true; |
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328 | server = new CContextServer(this,intraComm,interComm); |
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329 | |
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330 | registryIn=new CRegistry(intraComm); |
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331 | registryIn->setPath(getId()) ; |
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332 | if (server->intraCommRank==0) registryIn->fromFile("xios_registry.bin") ; |
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333 | registryIn->bcastRegistry() ; |
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334 | registryOut=new CRegistry(intraComm) ; |
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335 | registryOut->setPath(getId()) ; |
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336 | |
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337 | ep_lib::MPI_Comm intraCommClient, interCommClient; |
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338 | if (cxtClient) // Attached mode |
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339 | { |
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340 | intraCommClient = intraComm; |
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341 | interCommClient = interComm; |
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342 | } |
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343 | else |
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344 | { |
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345 | MPI_Comm_dup(intraComm, &intraCommClient); |
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346 | comms.push_back(intraCommClient); |
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347 | MPI_Comm_dup(interComm, &interCommClient); |
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348 | comms.push_back(interCommClient); |
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349 | } |
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350 | client = new CContextClient(this,intraCommClient,interCommClient, cxtClient); |
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351 | } |
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352 | |
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353 | //! Try to send the buffers and receive possible answers |
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354 | bool CContext::checkBuffersAndListen(void) |
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355 | { |
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356 | client->checkBuffers(); |
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357 | |
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358 | bool hasTmpBufferedEvent = client->hasTemporarilyBufferedEvent(); |
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359 | if (hasTmpBufferedEvent) |
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360 | hasTmpBufferedEvent = !client->sendTemporarilyBufferedEvent(); |
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361 | |
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362 | // Don't process events if there is a temporarily buffered event |
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363 | return server->eventLoop(!hasTmpBufferedEvent); |
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364 | } |
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365 | |
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366 | //! Terminate a context |
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367 | void CContext::finalize(void) |
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368 | { |
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369 | if (!finalized) |
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370 | { |
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371 | finalized = true; |
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372 | if (hasClient) sendRegistry() ; |
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373 | client->finalize(); |
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374 | while (!server->hasFinished()) |
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375 | { |
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376 | server->eventLoop(); |
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377 | } |
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378 | |
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379 | if (hasServer) |
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380 | { |
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381 | closeAllFile(); |
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382 | registryOut->hierarchicalGatherRegistry() ; |
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383 | if (server->intraCommRank==0) CXios::globalRegistry->mergeRegistry(*registryOut) ; |
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384 | } |
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385 | |
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386 | for (std::list<ep_lib::MPI_Comm>::iterator it = comms.begin(); it != comms.end(); ++it) |
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387 | MPI_Comm_free(&(*it)); |
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388 | comms.clear(); |
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389 | } |
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390 | } |
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391 | |
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392 | /*! |
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393 | \brief Close all the context defintion and do processing data |
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394 | After everything is well defined on client side, they will be processed and sent to server |
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395 | From the version 2.0, sever and client work no more on the same database. Moreover, client(s) will send |
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396 | all necessary information to server, from which each server can build its own database. |
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397 | Because the role of server is to write out field data on a specific netcdf file, |
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398 | the only information that it needs is the enabled files |
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399 | and the active fields (fields will be written onto active files) |
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400 | */ |
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401 | void CContext::closeDefinition(void) |
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402 | { |
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403 | // There is nothing client need to send to server |
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404 | if (hasClient) |
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405 | { |
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406 | // After xml is parsed, there are some more works with post processing |
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407 | postProcessing(); |
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408 | } |
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409 | setClientServerBuffer(); |
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410 | |
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411 | if (hasClient && !hasServer) |
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412 | { |
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413 | // Send all attributes of current context to server |
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414 | this->sendAllAttributesToServer(); |
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415 | |
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416 | // Send all attributes of current calendar |
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417 | CCalendarWrapper::get(CCalendarWrapper::GetDefName())->sendAllAttributesToServer(); |
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418 | |
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419 | // We have enough information to send to server |
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420 | // First of all, send all enabled files |
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421 | sendEnabledFiles(); |
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422 | |
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423 | // Then, send all enabled fields |
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424 | sendEnabledFields(); |
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425 | |
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426 | // At last, we have all info of domain and axis, then send them |
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427 | sendRefDomainsAxis(); |
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428 | |
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429 | // After that, send all grid (if any) |
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430 | sendRefGrid(); |
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431 | } |
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432 | |
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433 | // We have a xml tree on the server side and now, it should be also processed |
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434 | if (hasClient && !hasServer) sendPostProcessing(); |
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435 | |
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436 | // There are some processings that should be done after all of above. For example: check mask or index |
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437 | if (hasClient) |
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438 | { |
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439 | this->buildFilterGraphOfEnabledFields(); |
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440 | buildFilterGraphOfFieldsWithReadAccess(); |
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441 | this->solveAllRefOfEnabledFields(true); |
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442 | } |
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443 | |
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444 | // Now tell server that it can process all messages from client |
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445 | if (hasClient && !hasServer) this->sendCloseDefinition(); |
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446 | |
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447 | // Nettoyage de l'arborescence |
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448 | if (hasClient && !hasServer) CleanTree(); // Only on client side?? |
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449 | |
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450 | if (hasClient) |
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451 | { |
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452 | sendCreateFileHeader(); |
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453 | |
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454 | startPrefetchingOfEnabledReadModeFiles(); |
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455 | } |
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456 | } |
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457 | |
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458 | void CContext::findAllEnabledFields(void) |
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459 | { |
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460 | for (unsigned int i = 0; i < this->enabledFiles.size(); i++) |
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461 | (void)this->enabledFiles[i]->getEnabledFields(); |
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462 | } |
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463 | |
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464 | void CContext::findAllEnabledFieldsInReadModeFiles(void) |
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465 | { |
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466 | for (unsigned int i = 0; i < this->enabledReadModeFiles.size(); ++i) |
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467 | (void)this->enabledReadModeFiles[i]->getEnabledFields(); |
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468 | } |
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469 | |
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470 | void CContext::readAttributesOfEnabledFieldsInReadModeFiles() |
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471 | { |
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472 | for (unsigned int i = 0; i < this->enabledReadModeFiles.size(); ++i) |
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473 | (void)this->enabledReadModeFiles[i]->readAttributesOfEnabledFieldsInReadMode(); |
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474 | } |
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475 | |
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476 | void CContext::solveOnlyRefOfEnabledFields(bool sendToServer) |
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477 | { |
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478 | int size = this->enabledFiles.size(); |
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479 | for (int i = 0; i < size; ++i) |
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480 | { |
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481 | this->enabledFiles[i]->solveOnlyRefOfEnabledFields(sendToServer); |
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482 | } |
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483 | |
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484 | for (int i = 0; i < size; ++i) |
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485 | { |
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486 | this->enabledFiles[i]->generateNewTransformationGridDest(); |
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487 | } |
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488 | } |
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489 | |
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490 | void CContext::solveAllRefOfEnabledFields(bool sendToServer) |
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491 | { |
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492 | int size = this->enabledFiles.size(); |
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493 | for (int i = 0; i < size; ++i) |
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494 | { |
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495 | this->enabledFiles[i]->solveAllRefOfEnabledFields(sendToServer); |
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496 | } |
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497 | } |
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498 | |
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499 | void CContext::buildFilterGraphOfEnabledFields() |
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500 | { |
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501 | int size = this->enabledFiles.size(); |
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502 | for (int i = 0; i < size; ++i) |
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503 | { |
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504 | this->enabledFiles[i]->buildFilterGraphOfEnabledFields(garbageCollector); |
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505 | } |
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506 | } |
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507 | |
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508 | void CContext::startPrefetchingOfEnabledReadModeFiles() |
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509 | { |
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510 | int size = enabledReadModeFiles.size(); |
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511 | for (int i = 0; i < size; ++i) |
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512 | { |
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513 | enabledReadModeFiles[i]->prefetchEnabledReadModeFields(); |
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514 | } |
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515 | } |
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516 | |
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517 | void CContext::checkPrefetchingOfEnabledReadModeFiles() |
---|
518 | { |
---|
519 | int size = enabledReadModeFiles.size(); |
---|
520 | for (int i = 0; i < size; ++i) |
---|
521 | { |
---|
522 | enabledReadModeFiles[i]->prefetchEnabledReadModeFieldsIfNeeded(); |
---|
523 | } |
---|
524 | } |
---|
525 | |
---|
526 | void CContext::findFieldsWithReadAccess(void) |
---|
527 | { |
---|
528 | fieldsWithReadAccess.clear(); |
---|
529 | const vector<CField*> allFields = CField::getAll(); |
---|
530 | for (size_t i = 0; i < allFields.size(); ++i) |
---|
531 | { |
---|
532 | CField* field = allFields[i]; |
---|
533 | |
---|
534 | if (field->file && !field->file->mode.isEmpty() && field->file->mode == CFile::mode_attr::read) |
---|
535 | field->read_access = true; |
---|
536 | else if (!field->read_access.isEmpty() && field->read_access && (field->enabled.isEmpty() || field->enabled)) |
---|
537 | fieldsWithReadAccess.push_back(field); |
---|
538 | } |
---|
539 | } |
---|
540 | |
---|
541 | void CContext::solveAllRefOfFieldsWithReadAccess() |
---|
542 | { |
---|
543 | for (size_t i = 0; i < fieldsWithReadAccess.size(); ++i) |
---|
544 | fieldsWithReadAccess[i]->solveAllReferenceEnabledField(false); |
---|
545 | } |
---|
546 | |
---|
547 | void CContext::buildFilterGraphOfFieldsWithReadAccess() |
---|
548 | { |
---|
549 | for (size_t i = 0; i < fieldsWithReadAccess.size(); ++i) |
---|
550 | fieldsWithReadAccess[i]->buildFilterGraph(garbageCollector, true); |
---|
551 | } |
---|
552 | |
---|
553 | void CContext::solveAllInheritance(bool apply) |
---|
554 | { |
---|
555 | // Rsolution des hritages descendants (cd des hritages de groupes) |
---|
556 | // pour chacun des contextes. |
---|
557 | solveDescInheritance(apply); |
---|
558 | |
---|
559 | // Rsolution des hritages par rfrence au niveau des fichiers. |
---|
560 | const vector<CFile*> allFiles=CFile::getAll(); |
---|
561 | const vector<CGrid*> allGrids= CGrid::getAll(); |
---|
562 | |
---|
563 | //if (hasClient && !hasServer) |
---|
564 | if (hasClient) |
---|
565 | { |
---|
566 | for (unsigned int i = 0; i < allFiles.size(); i++) |
---|
567 | allFiles[i]->solveFieldRefInheritance(apply); |
---|
568 | } |
---|
569 | |
---|
570 | unsigned int vecSize = allGrids.size(); |
---|
571 | unsigned int i = 0; |
---|
572 | for (i = 0; i < vecSize; ++i) |
---|
573 | allGrids[i]->solveDomainAxisRefInheritance(apply); |
---|
574 | |
---|
575 | } |
---|
576 | |
---|
577 | void CContext::findEnabledFiles(void) |
---|
578 | { |
---|
579 | const std::vector<CFile*> allFiles = CFile::getAll(); |
---|
580 | const CDate& initDate = calendar->getInitDate(); |
---|
581 | |
---|
582 | for (unsigned int i = 0; i < allFiles.size(); i++) |
---|
583 | if (!allFiles[i]->enabled.isEmpty()) // Si l'attribut 'enabled' est dfini. |
---|
584 | { |
---|
585 | if (allFiles[i]->enabled.getValue()) // Si l'attribut 'enabled' est fix vrai. |
---|
586 | { |
---|
587 | if ((initDate + allFiles[i]->output_freq.getValue()) < (initDate + this->getCalendar()->getTimeStep())) |
---|
588 | { |
---|
589 | error(0)<<"WARNING: void CContext::findEnabledFiles()"<<endl |
---|
590 | << "Output frequency in file \""<<allFiles[i]->getFileOutputName() |
---|
591 | <<"\" is less than the time step. File will not be written."<<endl; |
---|
592 | } |
---|
593 | else |
---|
594 | enabledFiles.push_back(allFiles[i]); |
---|
595 | } |
---|
596 | } |
---|
597 | else |
---|
598 | { |
---|
599 | if ( (initDate + allFiles[i]->output_freq.getValue()) < (initDate + this->getCalendar()->getTimeStep())) |
---|
600 | { |
---|
601 | error(0)<<"WARNING: void CContext::findEnabledFiles()"<<endl |
---|
602 | << "Output frequency in file \""<<allFiles[i]->getFileOutputName() |
---|
603 | <<"\" is less than the time step. File will not be written."<<endl; |
---|
604 | } |
---|
605 | else |
---|
606 | enabledFiles.push_back(allFiles[i]); // otherwise true by default |
---|
607 | } |
---|
608 | |
---|
609 | if (enabledFiles.size() == 0) |
---|
610 | DEBUG(<<"Aucun fichier ne va tre sorti dans le contexte nomm \"" |
---|
611 | << getId() << "\" !"); |
---|
612 | } |
---|
613 | |
---|
614 | void CContext::findEnabledReadModeFiles(void) |
---|
615 | { |
---|
616 | int size = this->enabledFiles.size(); |
---|
617 | for (int i = 0; i < size; ++i) |
---|
618 | { |
---|
619 | if (!enabledFiles[i]->mode.isEmpty() && enabledFiles[i]->mode.getValue() == CFile::mode_attr::read) |
---|
620 | enabledReadModeFiles.push_back(enabledFiles[i]); |
---|
621 | } |
---|
622 | } |
---|
623 | |
---|
624 | void CContext::closeAllFile(void) |
---|
625 | { |
---|
626 | std::vector<CFile*>::const_iterator |
---|
627 | it = this->enabledFiles.begin(), end = this->enabledFiles.end(); |
---|
628 | |
---|
629 | for (; it != end; it++) |
---|
630 | { |
---|
631 | info(30)<<"Closing File : "<<(*it)->getId()<<endl; |
---|
632 | (*it)->close(); |
---|
633 | } |
---|
634 | } |
---|
635 | |
---|
636 | /*! |
---|
637 | \brief Dispatch event received from client |
---|
638 | Whenever a message is received in buffer of server, it will be processed depending on |
---|
639 | its event type. A new event type should be added in the switch list to make sure |
---|
640 | it processed on server side. |
---|
641 | \param [in] event: Received message |
---|
642 | */ |
---|
643 | bool CContext::dispatchEvent(CEventServer& event) |
---|
644 | { |
---|
645 | |
---|
646 | if (SuperClass::dispatchEvent(event)) return true; |
---|
647 | else |
---|
648 | { |
---|
649 | switch(event.type) |
---|
650 | { |
---|
651 | case EVENT_ID_CLOSE_DEFINITION : |
---|
652 | recvCloseDefinition(event); |
---|
653 | return true; |
---|
654 | break; |
---|
655 | case EVENT_ID_UPDATE_CALENDAR: |
---|
656 | recvUpdateCalendar(event); |
---|
657 | return true; |
---|
658 | break; |
---|
659 | case EVENT_ID_CREATE_FILE_HEADER : |
---|
660 | recvCreateFileHeader(event); |
---|
661 | return true; |
---|
662 | break; |
---|
663 | case EVENT_ID_POST_PROCESS: |
---|
664 | recvPostProcessing(event); |
---|
665 | return true; |
---|
666 | case EVENT_ID_SEND_REGISTRY: |
---|
667 | recvRegistry(event); |
---|
668 | return true; |
---|
669 | break; |
---|
670 | |
---|
671 | default : |
---|
672 | ERROR("bool CContext::dispatchEvent(CEventServer& event)", |
---|
673 | <<"Unknown Event"); |
---|
674 | return false; |
---|
675 | } |
---|
676 | } |
---|
677 | } |
---|
678 | |
---|
679 | //! Client side: Send a message to server to make it close |
---|
680 | void CContext::sendCloseDefinition(void) |
---|
681 | { |
---|
682 | CEventClient event(getType(),EVENT_ID_CLOSE_DEFINITION); |
---|
683 | if (client->isServerLeader()) |
---|
684 | { |
---|
685 | CMessage msg; |
---|
686 | msg<<this->getIdServer(); |
---|
687 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
688 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
689 | event.push(*itRank,1,msg); |
---|
690 | client->sendEvent(event); |
---|
691 | } |
---|
692 | else client->sendEvent(event); |
---|
693 | } |
---|
694 | |
---|
695 | //! Server side: Receive a message of client announcing a context close |
---|
696 | void CContext::recvCloseDefinition(CEventServer& event) |
---|
697 | { |
---|
698 | |
---|
699 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
700 | string id; |
---|
701 | *buffer>>id; |
---|
702 | get(id)->closeDefinition(); |
---|
703 | } |
---|
704 | |
---|
705 | //! Client side: Send a message to update calendar in each time step |
---|
706 | void CContext::sendUpdateCalendar(int step) |
---|
707 | { |
---|
708 | if (!hasServer) |
---|
709 | { |
---|
710 | CEventClient event(getType(),EVENT_ID_UPDATE_CALENDAR); |
---|
711 | if (client->isServerLeader()) |
---|
712 | { |
---|
713 | CMessage msg; |
---|
714 | msg<<this->getIdServer()<<step; |
---|
715 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
716 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
717 | event.push(*itRank,1,msg); |
---|
718 | client->sendEvent(event); |
---|
719 | } |
---|
720 | else client->sendEvent(event); |
---|
721 | } |
---|
722 | } |
---|
723 | |
---|
724 | //! Server side: Receive a message of client annoucing calendar update |
---|
725 | void CContext::recvUpdateCalendar(CEventServer& event) |
---|
726 | { |
---|
727 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
728 | string id; |
---|
729 | *buffer>>id; |
---|
730 | get(id)->recvUpdateCalendar(*buffer); |
---|
731 | } |
---|
732 | |
---|
733 | //! Server side: Receive a message of client annoucing calendar update |
---|
734 | void CContext::recvUpdateCalendar(CBufferIn& buffer) |
---|
735 | { |
---|
736 | int step; |
---|
737 | buffer>>step; |
---|
738 | updateCalendar(step); |
---|
739 | } |
---|
740 | |
---|
741 | //! Client side: Send a message to create header part of netcdf file |
---|
742 | void CContext::sendCreateFileHeader(void) |
---|
743 | { |
---|
744 | CEventClient event(getType(),EVENT_ID_CREATE_FILE_HEADER); |
---|
745 | if (client->isServerLeader()) |
---|
746 | { |
---|
747 | CMessage msg; |
---|
748 | msg<<this->getIdServer(); |
---|
749 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
750 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
751 | event.push(*itRank,1,msg) ; |
---|
752 | client->sendEvent(event); |
---|
753 | } |
---|
754 | else client->sendEvent(event); |
---|
755 | } |
---|
756 | |
---|
757 | //! Server side: Receive a message of client annoucing the creation of header part of netcdf file |
---|
758 | void CContext::recvCreateFileHeader(CEventServer& event) |
---|
759 | { |
---|
760 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
761 | string id; |
---|
762 | *buffer>>id; |
---|
763 | get(id)->recvCreateFileHeader(*buffer); |
---|
764 | } |
---|
765 | |
---|
766 | //! Server side: Receive a message of client annoucing the creation of header part of netcdf file |
---|
767 | void CContext::recvCreateFileHeader(CBufferIn& buffer) |
---|
768 | { |
---|
769 | createFileHeader(); |
---|
770 | } |
---|
771 | |
---|
772 | //! Client side: Send a message to do some post processing on server |
---|
773 | void CContext::sendPostProcessing() |
---|
774 | { |
---|
775 | if (!hasServer) |
---|
776 | { |
---|
777 | CEventClient event(getType(),EVENT_ID_POST_PROCESS); |
---|
778 | if (client->isServerLeader()) |
---|
779 | { |
---|
780 | CMessage msg; |
---|
781 | msg<<this->getIdServer(); |
---|
782 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
783 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
784 | event.push(*itRank,1,msg); |
---|
785 | client->sendEvent(event); |
---|
786 | } |
---|
787 | else client->sendEvent(event); |
---|
788 | } |
---|
789 | } |
---|
790 | |
---|
791 | //! Server side: Receive a message to do some post processing |
---|
792 | void CContext::recvPostProcessing(CEventServer& event) |
---|
793 | { |
---|
794 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
795 | string id; |
---|
796 | *buffer>>id; |
---|
797 | get(id)->recvPostProcessing(*buffer); |
---|
798 | } |
---|
799 | |
---|
800 | //! Server side: Receive a message to do some post processing |
---|
801 | void CContext::recvPostProcessing(CBufferIn& buffer) |
---|
802 | { |
---|
803 | CCalendarWrapper::get(CCalendarWrapper::GetDefName())->createCalendar(); |
---|
804 | postProcessing(); |
---|
805 | } |
---|
806 | |
---|
807 | const StdString& CContext::getIdServer() |
---|
808 | { |
---|
809 | if (hasClient) |
---|
810 | { |
---|
811 | idServer_ = this->getId(); |
---|
812 | idServer_ += "_server"; |
---|
813 | return idServer_; |
---|
814 | } |
---|
815 | if (hasServer) return (this->getId()); |
---|
816 | } |
---|
817 | |
---|
818 | /*! |
---|
819 | \brief Do some simple post processings after parsing xml file |
---|
820 | After the xml file (iodef.xml) is parsed, it is necessary to build all relations among |
---|
821 | created object, e.g: inhertance among fields, domain, axis. After that, all fiels as well as their parents (reference fields), |
---|
822 | which will be written out into netcdf files, are processed |
---|
823 | */ |
---|
824 | void CContext::postProcessing() |
---|
825 | { |
---|
826 | int myRank; |
---|
827 | MPI_Comm_rank(MPI_COMM_WORLD, &myRank); |
---|
828 | |
---|
829 | if (isPostProcessed) return; |
---|
830 | |
---|
831 | // Make sure the calendar was correctly created |
---|
832 | if (!calendar) |
---|
833 | ERROR("CContext::postProcessing()", << "A calendar must be defined for the context \"" << getId() << "!\"") |
---|
834 | else if (calendar->getTimeStep() == NoneDu) |
---|
835 | ERROR("CContext::postProcessing()", << "A timestep must be defined for the context \"" << getId() << "!\"") |
---|
836 | // Calendar first update to set the current date equals to the start date |
---|
837 | calendar->update(0); |
---|
838 | |
---|
839 | // Find all inheritance in xml structure |
---|
840 | this->solveAllInheritance(); |
---|
841 | |
---|
842 | // Check if some axis, domains or grids are eligible to for compressed indexed output. |
---|
843 | // Warning: This must be done after solving the inheritance and before the rest of post-processing |
---|
844 | checkAxisDomainsGridsEligibilityForCompressedOutput(); |
---|
845 | |
---|
846 | // Check if some automatic time series should be generated |
---|
847 | // Warning: This must be done after solving the inheritance and before the rest of post-processing |
---|
848 | prepareTimeseries(); |
---|
849 | |
---|
850 | //Initialisation du vecteur 'enabledFiles' contenant la liste des fichiers sortir. |
---|
851 | this->findEnabledFiles(); |
---|
852 | this->findEnabledReadModeFiles(); |
---|
853 | |
---|
854 | // Find all enabled fields of each file |
---|
855 | this->findAllEnabledFields(); |
---|
856 | this->findAllEnabledFieldsInReadModeFiles(); |
---|
857 | |
---|
858 | if (hasClient && !hasServer) |
---|
859 | { |
---|
860 | // Try to read attributes of fields in file then fill in corresponding grid (or domain, axis) |
---|
861 | this->readAttributesOfEnabledFieldsInReadModeFiles(); |
---|
862 | } |
---|
863 | |
---|
864 | // Only search and rebuild all reference objects of enable fields, don't transform |
---|
865 | this->solveOnlyRefOfEnabledFields(false); |
---|
866 | |
---|
867 | // Search and rebuild all reference object of enabled fields |
---|
868 | this->solveAllRefOfEnabledFields(false); |
---|
869 | |
---|
870 | // Find all fields with read access from the public API |
---|
871 | findFieldsWithReadAccess(); |
---|
872 | // and solve the all reference for them |
---|
873 | solveAllRefOfFieldsWithReadAccess(); |
---|
874 | |
---|
875 | isPostProcessed = true; |
---|
876 | } |
---|
877 | |
---|
878 | /*! |
---|
879 | * Compute the required buffer size to send the attributes (mostly those grid related). |
---|
880 | * |
---|
881 | * \param maxEventSize [in/out] the size of the bigger event for each connected server |
---|
882 | */ |
---|
883 | std::map<int, StdSize> CContext::getAttributesBufferSize(std::map<int, StdSize>& maxEventSize) |
---|
884 | { |
---|
885 | std::map<int, StdSize> attributesSize; |
---|
886 | |
---|
887 | if (hasClient) |
---|
888 | { |
---|
889 | size_t numEnabledFiles = this->enabledFiles.size(); |
---|
890 | for (size_t i = 0; i < numEnabledFiles; ++i) |
---|
891 | { |
---|
892 | CFile* file = this->enabledFiles[i]; |
---|
893 | |
---|
894 | std::vector<CField*> enabledFields = file->getEnabledFields(); |
---|
895 | size_t numEnabledFields = enabledFields.size(); |
---|
896 | for (size_t j = 0; j < numEnabledFields; ++j) |
---|
897 | { |
---|
898 | const std::map<int, StdSize> mapSize = enabledFields[j]->getGridAttributesBufferSize(); |
---|
899 | std::map<int, StdSize>::const_iterator it = mapSize.begin(), itE = mapSize.end(); |
---|
900 | for (; it != itE; ++it) |
---|
901 | { |
---|
902 | // If attributesSize[it->first] does not exist, it will be zero-initialized |
---|
903 | // so we can use it safely without checking for its existance |
---|
904 | if (attributesSize[it->first] < it->second) |
---|
905 | attributesSize[it->first] = it->second; |
---|
906 | |
---|
907 | if (maxEventSize[it->first] < it->second) |
---|
908 | maxEventSize[it->first] = it->second; |
---|
909 | } |
---|
910 | } |
---|
911 | } |
---|
912 | } |
---|
913 | |
---|
914 | return attributesSize; |
---|
915 | } |
---|
916 | |
---|
917 | /*! |
---|
918 | * Compute the required buffer size to send the fields data. |
---|
919 | * |
---|
920 | * \param maxEventSize [in/out] the size of the bigger event for each connected server |
---|
921 | */ |
---|
922 | std::map<int, StdSize> CContext::getDataBufferSize(std::map<int, StdSize>& maxEventSize) |
---|
923 | { |
---|
924 | CFile::mode_attr::t_enum mode = hasClient ? CFile::mode_attr::write : CFile::mode_attr::read; |
---|
925 | |
---|
926 | std::map<int, StdSize> dataSize; |
---|
927 | |
---|
928 | // Find all reference domain and axis of all active fields |
---|
929 | size_t numEnabledFiles = this->enabledFiles.size(); |
---|
930 | for (size_t i = 0; i < numEnabledFiles; ++i) |
---|
931 | { |
---|
932 | CFile* file = this->enabledFiles[i]; |
---|
933 | CFile::mode_attr::t_enum fileMode = file->mode.isEmpty() ? CFile::mode_attr::write : file->mode.getValue(); |
---|
934 | |
---|
935 | if (fileMode == mode) |
---|
936 | { |
---|
937 | std::vector<CField*> enabledFields = file->getEnabledFields(); |
---|
938 | size_t numEnabledFields = enabledFields.size(); |
---|
939 | for (size_t j = 0; j < numEnabledFields; ++j) |
---|
940 | { |
---|
941 | const std::map<int, StdSize> mapSize = enabledFields[j]->getGridDataBufferSize(); |
---|
942 | std::map<int, StdSize>::const_iterator it = mapSize.begin(), itE = mapSize.end(); |
---|
943 | for (; it != itE; ++it) |
---|
944 | { |
---|
945 | // If dataSize[it->first] does not exist, it will be zero-initialized |
---|
946 | // so we can use it safely without checking for its existance |
---|
947 | if (CXios::isOptPerformance) |
---|
948 | dataSize[it->first] += it->second; |
---|
949 | else if (dataSize[it->first] < it->second) |
---|
950 | dataSize[it->first] = it->second; |
---|
951 | |
---|
952 | if (maxEventSize[it->first] < it->second) |
---|
953 | maxEventSize[it->first] = it->second; |
---|
954 | } |
---|
955 | } |
---|
956 | } |
---|
957 | } |
---|
958 | |
---|
959 | return dataSize; |
---|
960 | } |
---|
961 | |
---|
962 | //! Client side: Send infomation of active files (files are enabled to write out) |
---|
963 | void CContext::sendEnabledFiles() |
---|
964 | { |
---|
965 | int size = this->enabledFiles.size(); |
---|
966 | |
---|
967 | // In a context, each type has a root definition, e.g: axis, domain, field. |
---|
968 | // Every object must be a child of one of these root definition. In this case |
---|
969 | // all new file objects created on server must be children of the root "file_definition" |
---|
970 | StdString fileDefRoot("file_definition"); |
---|
971 | CFileGroup* cfgrpPtr = CFileGroup::get(fileDefRoot); |
---|
972 | |
---|
973 | for (int i = 0; i < size; ++i) |
---|
974 | { |
---|
975 | cfgrpPtr->sendCreateChild(this->enabledFiles[i]->getId()); |
---|
976 | this->enabledFiles[i]->sendAllAttributesToServer(); |
---|
977 | this->enabledFiles[i]->sendAddAllVariables(); |
---|
978 | } |
---|
979 | } |
---|
980 | |
---|
981 | //! Client side: Send information of active fields (ones are written onto files) |
---|
982 | void CContext::sendEnabledFields() |
---|
983 | { |
---|
984 | int size = this->enabledFiles.size(); |
---|
985 | for (int i = 0; i < size; ++i) |
---|
986 | { |
---|
987 | this->enabledFiles[i]->sendEnabledFields(); |
---|
988 | } |
---|
989 | } |
---|
990 | |
---|
991 | //! Client side: Check if the defined axis, domains and grids are eligible for compressed indexed output |
---|
992 | void CContext::checkAxisDomainsGridsEligibilityForCompressedOutput() |
---|
993 | { |
---|
994 | if (!hasClient) return; |
---|
995 | |
---|
996 | const vector<CAxis*> allAxis = CAxis::getAll(); |
---|
997 | for (vector<CAxis*>::const_iterator it = allAxis.begin(); it != allAxis.end(); it++) |
---|
998 | (*it)->checkEligibilityForCompressedOutput(); |
---|
999 | |
---|
1000 | const vector<CDomain*> allDomains = CDomain::getAll(); |
---|
1001 | for (vector<CDomain*>::const_iterator it = allDomains.begin(); it != allDomains.end(); it++) |
---|
1002 | (*it)->checkEligibilityForCompressedOutput(); |
---|
1003 | |
---|
1004 | const vector<CGrid*> allGrids = CGrid::getAll(); |
---|
1005 | for (vector<CGrid*>::const_iterator it = allGrids.begin(); it != allGrids.end(); it++) |
---|
1006 | (*it)->checkEligibilityForCompressedOutput(); |
---|
1007 | } |
---|
1008 | |
---|
1009 | //! Client side: Prepare the timeseries by adding the necessary files |
---|
1010 | void CContext::prepareTimeseries() |
---|
1011 | { |
---|
1012 | if (!hasClient) return; |
---|
1013 | |
---|
1014 | const std::vector<CFile*> allFiles = CFile::getAll(); |
---|
1015 | for (size_t i = 0; i < allFiles.size(); i++) |
---|
1016 | { |
---|
1017 | CFile* file = allFiles[i]; |
---|
1018 | |
---|
1019 | std::vector<CVariable*> fileVars, fieldVars, vars = file->getAllVariables(); |
---|
1020 | for (size_t k = 0; k < vars.size(); k++) |
---|
1021 | { |
---|
1022 | CVariable* var = vars[k]; |
---|
1023 | |
---|
1024 | if (var->ts_target.isEmpty() |
---|
1025 | || var->ts_target == CVariable::ts_target_attr::file || var->ts_target == CVariable::ts_target_attr::both) |
---|
1026 | fileVars.push_back(var); |
---|
1027 | |
---|
1028 | if (!var->ts_target.isEmpty() |
---|
1029 | && (var->ts_target == CVariable::ts_target_attr::field || var->ts_target == CVariable::ts_target_attr::both)) |
---|
1030 | fieldVars.push_back(var); |
---|
1031 | } |
---|
1032 | |
---|
1033 | if (!file->timeseries.isEmpty() && file->timeseries != CFile::timeseries_attr::none) |
---|
1034 | { |
---|
1035 | StdString fileNameStr("%file_name%") ; |
---|
1036 | StdString tsPrefix = !file->ts_prefix.isEmpty() ? file->ts_prefix : fileNameStr ; |
---|
1037 | |
---|
1038 | StdString fileName=file->getFileOutputName(); |
---|
1039 | size_t pos=tsPrefix.find(fileNameStr) ; |
---|
1040 | while (pos!=std::string::npos) |
---|
1041 | { |
---|
1042 | tsPrefix=tsPrefix.replace(pos,fileNameStr.size(),fileName) ; |
---|
1043 | pos=tsPrefix.find(fileNameStr) ; |
---|
1044 | } |
---|
1045 | |
---|
1046 | const std::vector<CField*> allFields = file->getAllFields(); |
---|
1047 | for (size_t j = 0; j < allFields.size(); j++) |
---|
1048 | { |
---|
1049 | CField* field = allFields[j]; |
---|
1050 | |
---|
1051 | if (!field->ts_enabled.isEmpty() && field->ts_enabled) |
---|
1052 | { |
---|
1053 | CFile* tsFile = CFile::create(); |
---|
1054 | tsFile->duplicateAttributes(file); |
---|
1055 | |
---|
1056 | // Add variables originating from file and targeted to timeserie file |
---|
1057 | for (size_t k = 0; k < fileVars.size(); k++) |
---|
1058 | tsFile->getVirtualVariableGroup()->addChild(fileVars[k]); |
---|
1059 | |
---|
1060 | |
---|
1061 | tsFile->name = tsPrefix + "_"; |
---|
1062 | if (!field->name.isEmpty()) |
---|
1063 | tsFile->name.get() += field->name; |
---|
1064 | else if (field->hasDirectFieldReference()) // We cannot use getBaseFieldReference() just yet |
---|
1065 | tsFile->name.get() += field->field_ref; |
---|
1066 | else |
---|
1067 | tsFile->name.get() += field->getId(); |
---|
1068 | |
---|
1069 | if (!field->ts_split_freq.isEmpty()) |
---|
1070 | tsFile->split_freq = field->ts_split_freq; |
---|
1071 | |
---|
1072 | CField* tsField = tsFile->addField(); |
---|
1073 | tsField->field_ref = field->getId(); |
---|
1074 | |
---|
1075 | // Add variables originating from file and targeted to timeserie field |
---|
1076 | for (size_t k = 0; k < fieldVars.size(); k++) |
---|
1077 | tsField->getVirtualVariableGroup()->addChild(fieldVars[k]); |
---|
1078 | |
---|
1079 | vars = field->getAllVariables(); |
---|
1080 | for (size_t k = 0; k < vars.size(); k++) |
---|
1081 | { |
---|
1082 | CVariable* var = vars[k]; |
---|
1083 | |
---|
1084 | // Add variables originating from field and targeted to timeserie field |
---|
1085 | if (var->ts_target.isEmpty() |
---|
1086 | || var->ts_target == CVariable::ts_target_attr::field || var->ts_target == CVariable::ts_target_attr::both) |
---|
1087 | tsField->getVirtualVariableGroup()->addChild(var); |
---|
1088 | |
---|
1089 | // Add variables originating from field and targeted to timeserie file |
---|
1090 | if (!var->ts_target.isEmpty() |
---|
1091 | && (var->ts_target == CVariable::ts_target_attr::file || var->ts_target == CVariable::ts_target_attr::both)) |
---|
1092 | tsFile->getVirtualVariableGroup()->addChild(var); |
---|
1093 | } |
---|
1094 | |
---|
1095 | tsFile->solveFieldRefInheritance(true); |
---|
1096 | |
---|
1097 | if (file->timeseries == CFile::timeseries_attr::exclusive) |
---|
1098 | field->enabled = false; |
---|
1099 | } |
---|
1100 | } |
---|
1101 | |
---|
1102 | // Finally disable the original file is need be |
---|
1103 | if (file->timeseries == CFile::timeseries_attr::only) |
---|
1104 | file->enabled = false; |
---|
1105 | } |
---|
1106 | } |
---|
1107 | } |
---|
1108 | |
---|
1109 | //! Client side: Send information of reference grid of active fields |
---|
1110 | void CContext::sendRefGrid() |
---|
1111 | { |
---|
1112 | std::set<StdString> gridIds; |
---|
1113 | int sizeFile = this->enabledFiles.size(); |
---|
1114 | CFile* filePtr(NULL); |
---|
1115 | |
---|
1116 | // Firstly, find all reference grids of all active fields |
---|
1117 | for (int i = 0; i < sizeFile; ++i) |
---|
1118 | { |
---|
1119 | filePtr = this->enabledFiles[i]; |
---|
1120 | std::vector<CField*> enabledFields = filePtr->getEnabledFields(); |
---|
1121 | int sizeField = enabledFields.size(); |
---|
1122 | for (int numField = 0; numField < sizeField; ++numField) |
---|
1123 | { |
---|
1124 | if (0 != enabledFields[numField]->getRelGrid()) |
---|
1125 | gridIds.insert(CGrid::get(enabledFields[numField]->getRelGrid())->getId()); |
---|
1126 | } |
---|
1127 | } |
---|
1128 | |
---|
1129 | // Create all reference grids on server side |
---|
1130 | StdString gridDefRoot("grid_definition"); |
---|
1131 | CGridGroup* gridPtr = CGridGroup::get(gridDefRoot); |
---|
1132 | std::set<StdString>::const_iterator it, itE = gridIds.end(); |
---|
1133 | for (it = gridIds.begin(); it != itE; ++it) |
---|
1134 | { |
---|
1135 | gridPtr->sendCreateChild(*it); |
---|
1136 | CGrid::get(*it)->sendAllAttributesToServer(); |
---|
1137 | CGrid::get(*it)->sendAllDomains(); |
---|
1138 | CGrid::get(*it)->sendAllAxis(); |
---|
1139 | CGrid::get(*it)->sendAllScalars(); |
---|
1140 | } |
---|
1141 | } |
---|
1142 | |
---|
1143 | |
---|
1144 | //! Client side: Send information of reference domain and axis of active fields |
---|
1145 | void CContext::sendRefDomainsAxis() |
---|
1146 | { |
---|
1147 | std::set<StdString> domainIds, axisIds, scalarIds; |
---|
1148 | |
---|
1149 | // Find all reference domain and axis of all active fields |
---|
1150 | int numEnabledFiles = this->enabledFiles.size(); |
---|
1151 | for (int i = 0; i < numEnabledFiles; ++i) |
---|
1152 | { |
---|
1153 | std::vector<CField*> enabledFields = this->enabledFiles[i]->getEnabledFields(); |
---|
1154 | int numEnabledFields = enabledFields.size(); |
---|
1155 | for (int j = 0; j < numEnabledFields; ++j) |
---|
1156 | { |
---|
1157 | const std::vector<StdString>& prDomAxisScalarId = enabledFields[j]->getRefDomainAxisIds(); |
---|
1158 | if ("" != prDomAxisScalarId[0]) domainIds.insert(prDomAxisScalarId[0]); |
---|
1159 | if ("" != prDomAxisScalarId[1]) axisIds.insert(prDomAxisScalarId[1]); |
---|
1160 | if ("" != prDomAxisScalarId[2]) scalarIds.insert(prDomAxisScalarId[2]); |
---|
1161 | } |
---|
1162 | } |
---|
1163 | |
---|
1164 | // Create all reference axis on server side |
---|
1165 | std::set<StdString>::iterator itDom, itAxis, itScalar; |
---|
1166 | std::set<StdString>::const_iterator itE; |
---|
1167 | |
---|
1168 | StdString scalarDefRoot("scalar_definition"); |
---|
1169 | CScalarGroup* scalarPtr = CScalarGroup::get(scalarDefRoot); |
---|
1170 | itE = scalarIds.end(); |
---|
1171 | for (itScalar = scalarIds.begin(); itScalar != itE; ++itScalar) |
---|
1172 | { |
---|
1173 | if (!itScalar->empty()) |
---|
1174 | { |
---|
1175 | scalarPtr->sendCreateChild(*itScalar); |
---|
1176 | CScalar::get(*itScalar)->sendAllAttributesToServer(); |
---|
1177 | } |
---|
1178 | } |
---|
1179 | |
---|
1180 | StdString axiDefRoot("axis_definition"); |
---|
1181 | CAxisGroup* axisPtr = CAxisGroup::get(axiDefRoot); |
---|
1182 | itE = axisIds.end(); |
---|
1183 | for (itAxis = axisIds.begin(); itAxis != itE; ++itAxis) |
---|
1184 | { |
---|
1185 | if (!itAxis->empty()) |
---|
1186 | { |
---|
1187 | axisPtr->sendCreateChild(*itAxis); |
---|
1188 | CAxis::get(*itAxis)->sendAllAttributesToServer(); |
---|
1189 | } |
---|
1190 | } |
---|
1191 | |
---|
1192 | // Create all reference domains on server side |
---|
1193 | StdString domDefRoot("domain_definition"); |
---|
1194 | CDomainGroup* domPtr = CDomainGroup::get(domDefRoot); |
---|
1195 | itE = domainIds.end(); |
---|
1196 | for (itDom = domainIds.begin(); itDom != itE; ++itDom) |
---|
1197 | { |
---|
1198 | if (!itDom->empty()) { |
---|
1199 | domPtr->sendCreateChild(*itDom); |
---|
1200 | CDomain::get(*itDom)->sendAllAttributesToServer(); |
---|
1201 | } |
---|
1202 | } |
---|
1203 | } |
---|
1204 | |
---|
1205 | //! Update calendar in each time step |
---|
1206 | void CContext::updateCalendar(int step) |
---|
1207 | { |
---|
1208 | calendar->update(step); |
---|
1209 | |
---|
1210 | |
---|
1211 | if (hasClient) |
---|
1212 | { |
---|
1213 | checkPrefetchingOfEnabledReadModeFiles(); |
---|
1214 | garbageCollector.invalidate(calendar->getCurrentDate()); |
---|
1215 | } |
---|
1216 | } |
---|
1217 | |
---|
1218 | //! Server side: Create header of netcdf file |
---|
1219 | void CContext::createFileHeader(void ) |
---|
1220 | { |
---|
1221 | vector<CFile*>::const_iterator it; |
---|
1222 | |
---|
1223 | for (it=enabledFiles.begin(); it != enabledFiles.end(); it++) |
---|
1224 | { |
---|
1225 | (*it)->initFile(); |
---|
1226 | } |
---|
1227 | } |
---|
1228 | |
---|
1229 | //! Get current context |
---|
1230 | CContext* CContext::getCurrent(void) |
---|
1231 | { |
---|
1232 | return CObjectFactory::GetObject<CContext>(CObjectFactory::GetCurrentContextId()).get(); |
---|
1233 | } |
---|
1234 | |
---|
1235 | /*! |
---|
1236 | \brief Set context with an id be the current context |
---|
1237 | \param [in] id identity of context to be set to current |
---|
1238 | */ |
---|
1239 | void CContext::setCurrent(const string& id) |
---|
1240 | { |
---|
1241 | CObjectFactory::SetCurrentContextId(id); |
---|
1242 | CGroupFactory::SetCurrentContextId(id); |
---|
1243 | } |
---|
1244 | |
---|
1245 | /*! |
---|
1246 | \brief Create a context with specific id |
---|
1247 | \param [in] id identity of new context |
---|
1248 | \return pointer to the new context or already-existed one with identity id |
---|
1249 | */ |
---|
1250 | CContext* CContext::create(const StdString& id) |
---|
1251 | { |
---|
1252 | CContext::setCurrent(id); |
---|
1253 | |
---|
1254 | bool hasctxt = CContext::has(id); |
---|
1255 | CContext* context = CObjectFactory::CreateObject<CContext>(id).get(); |
---|
1256 | getRoot(); |
---|
1257 | //if (!hasctxt) CGroupFactory::AddChild(root, context->getShared()); |
---|
1258 | if (!hasctxt) CGroupFactory::AddChild(*root_ptr, context->getShared()); |
---|
1259 | |
---|
1260 | #define DECLARE_NODE(Name_, name_) \ |
---|
1261 | C##Name_##Definition::create(C##Name_##Definition::GetDefName()); |
---|
1262 | #define DECLARE_NODE_PAR(Name_, name_) |
---|
1263 | #include "node_type.conf" |
---|
1264 | |
---|
1265 | return (context); |
---|
1266 | } |
---|
1267 | |
---|
1268 | |
---|
1269 | |
---|
1270 | //! Server side: Receive a message to do some post processing |
---|
1271 | void CContext::recvRegistry(CEventServer& event) |
---|
1272 | { |
---|
1273 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
1274 | string id; |
---|
1275 | *buffer>>id; |
---|
1276 | get(id)->recvRegistry(*buffer); |
---|
1277 | } |
---|
1278 | |
---|
1279 | void CContext::recvRegistry(CBufferIn& buffer) |
---|
1280 | { |
---|
1281 | if (server->intraCommRank==0) |
---|
1282 | { |
---|
1283 | CRegistry registry(server->intraComm) ; |
---|
1284 | registry.fromBuffer(buffer) ; |
---|
1285 | registryOut->mergeRegistry(registry) ; |
---|
1286 | } |
---|
1287 | } |
---|
1288 | |
---|
1289 | void CContext::sendRegistry(void) |
---|
1290 | { |
---|
1291 | registryOut->hierarchicalGatherRegistry() ; |
---|
1292 | |
---|
1293 | CEventClient event(CContext::GetType(), CContext::EVENT_ID_SEND_REGISTRY); |
---|
1294 | if (client->isServerLeader()) |
---|
1295 | { |
---|
1296 | CMessage msg ; |
---|
1297 | msg<<this->getIdServer(); |
---|
1298 | if (client->clientRank==0) msg<<*registryOut ; |
---|
1299 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
1300 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
1301 | event.push(*itRank,1,msg); |
---|
1302 | client->sendEvent(event); |
---|
1303 | } |
---|
1304 | else client->sendEvent(event); |
---|
1305 | } |
---|
1306 | |
---|
1307 | } // namespace xios |
---|