1 | #ifndef __XIOS_CGrid__ |
---|
2 | #define __XIOS_CGrid__ |
---|
3 | |
---|
4 | /// XIOS headers /// |
---|
5 | #include "xios_spl.hpp" |
---|
6 | #include "group_factory.hpp" |
---|
7 | |
---|
8 | #include "declare_group.hpp" |
---|
9 | #include "domain.hpp" |
---|
10 | #include "axis.hpp" |
---|
11 | #include "array_new.hpp" |
---|
12 | #include "attribute_array.hpp" |
---|
13 | #include "distribution_client.hpp" |
---|
14 | #include "distribution_server.hpp" |
---|
15 | #include "server_distribution_description.hpp" |
---|
16 | #include "client_server_mapping.hpp" |
---|
17 | #include "utils.hpp" |
---|
18 | |
---|
19 | namespace xios { |
---|
20 | |
---|
21 | /// ////////////////////// Déclarations ////////////////////// /// |
---|
22 | |
---|
23 | class CGridGroup; |
---|
24 | class CGridAttributes; |
---|
25 | class CDomainGroup; |
---|
26 | class CAxisGroup; |
---|
27 | class CGrid; |
---|
28 | class CDistributionClient; |
---|
29 | class CDistributionServer; |
---|
30 | class CServerDistributionDescription; |
---|
31 | class CClientServerMapping; |
---|
32 | |
---|
33 | ///-------------------------------------------------------------- |
---|
34 | |
---|
35 | // Declare/Define CGridAttribute |
---|
36 | BEGIN_DECLARE_ATTRIBUTE_MAP(CGrid) |
---|
37 | # include "grid_attribute.conf" |
---|
38 | DECLARE_ATTRIBUTE(bool, scalar_grid) |
---|
39 | END_DECLARE_ATTRIBUTE_MAP(CGrid) |
---|
40 | |
---|
41 | ///-------------------------------------------------------------- |
---|
42 | |
---|
43 | class CGrid |
---|
44 | : public CObjectTemplate<CGrid> |
---|
45 | , public CGridAttributes |
---|
46 | { |
---|
47 | /// typedef /// |
---|
48 | typedef CObjectTemplate<CGrid> SuperClass; |
---|
49 | typedef CGridAttributes SuperClassAttribute; |
---|
50 | |
---|
51 | public : |
---|
52 | |
---|
53 | typedef CGridAttributes RelAttributes; |
---|
54 | typedef CGridGroup RelGroup; |
---|
55 | |
---|
56 | enum EEventId |
---|
57 | { |
---|
58 | EVENT_ID_INDEX, EVENT_ID_ADD_DOMAIN, EVENT_ID_ADD_AXIS |
---|
59 | } ; |
---|
60 | |
---|
61 | /// Constructeurs /// |
---|
62 | CGrid(void); |
---|
63 | explicit CGrid(const StdString & id); |
---|
64 | CGrid(const CGrid & grid); // Not implemented yet. |
---|
65 | CGrid(const CGrid * const grid); // Not implemented yet. |
---|
66 | |
---|
67 | /// Traitements /// |
---|
68 | // void solveReference(void); |
---|
69 | |
---|
70 | void solveDomainAxisRef(bool areAttributesChecked); |
---|
71 | |
---|
72 | void checkMaskIndex(bool doCalculateIndex); |
---|
73 | |
---|
74 | // virtual void toBinary (StdOStream & os) const; |
---|
75 | // virtual void fromBinary(StdIStream & is); |
---|
76 | |
---|
77 | /// Tests /// |
---|
78 | bool hasAxis(void) const; |
---|
79 | |
---|
80 | public : |
---|
81 | |
---|
82 | /// Accesseurs /// |
---|
83 | const std::deque< CArray<int, 1>* > & getStoreIndex(void) const; |
---|
84 | const std::deque< CArray<int, 1>* > & getOutIIndex(void) const; |
---|
85 | const std::deque< CArray<int, 1>* > & getOutJIndex(void) const; |
---|
86 | const std::deque< CArray<int, 1>* > & getOutLIndex(void) const; |
---|
87 | |
---|
88 | const CAxis* getRelAxis (void) const; |
---|
89 | const CDomain* getRelDomain(void) const; |
---|
90 | |
---|
91 | StdSize getDimension(void) const; |
---|
92 | |
---|
93 | // StdSize getLocalSize(void) const; |
---|
94 | // StdSize getGlobalSize(void) const; |
---|
95 | StdSize getDataSize(void) const; |
---|
96 | // std::vector<StdSize> getLocalShape(void) const; |
---|
97 | // std::vector<StdSize> getGlobalShape(void) const; |
---|
98 | |
---|
99 | /// Entrées-sorties de champs /// |
---|
100 | template <int n> |
---|
101 | void inputField(const CArray<double,n>& field, CArray<double,1>& stored) const; |
---|
102 | template <int n> |
---|
103 | void outputField(const CArray<double,1>& stored, CArray<double,n>& field) const; |
---|
104 | |
---|
105 | void inputFieldServer(const std::deque< CArray<double, 1>* > storedClient, |
---|
106 | CArray<double, 1>& storedServer) const; |
---|
107 | |
---|
108 | void outputField(int rank, const CArray<double,1>& stored, CArray<double,3>& field) ; |
---|
109 | void outputField(int rank, const CArray<double,1>& stored, CArray<double,2>& field) ; |
---|
110 | void outputField(int rank, const CArray<double,1>& stored, CArray<double,1>& field) ; |
---|
111 | void outputField(int rank, const CArray<double,1>& stored, double* field); |
---|
112 | |
---|
113 | virtual void parse(xml::CXMLNode & node); |
---|
114 | |
---|
115 | /// Destructeur /// |
---|
116 | virtual ~CGrid(void); |
---|
117 | |
---|
118 | public : |
---|
119 | |
---|
120 | /// Accesseurs statiques /// |
---|
121 | static StdString GetName(void); |
---|
122 | static StdString GetDefName(void); |
---|
123 | |
---|
124 | static ENodeType GetType(void); |
---|
125 | |
---|
126 | /// Instanciateurs Statiques /// |
---|
127 | static CGrid* createGrid(CDomain* domain); |
---|
128 | static CGrid* createGrid(CDomain* domain, CAxis* axis); |
---|
129 | static CGrid* createGrid(std::vector<CDomain*> domains, std::vector<CAxis*> axis); |
---|
130 | |
---|
131 | public : |
---|
132 | |
---|
133 | /// Entrées-sorties de champs (interne) /// |
---|
134 | void storeField_arr(const double * const data, CArray<double,1>& stored) const; |
---|
135 | void restoreField_arr(const CArray<double,1>& stored, double * const data) const; |
---|
136 | |
---|
137 | /// Traitements protégés /// |
---|
138 | void computeIndexServer(void); |
---|
139 | void computeIndex(void); |
---|
140 | void computeIndexScalarGrid(); |
---|
141 | |
---|
142 | void solveDomainRef(bool checkAtt); |
---|
143 | void solveAxisRef(bool checkAtt); |
---|
144 | void solveDomainAxisRefInheritance(bool apply = true); |
---|
145 | |
---|
146 | void sendAddDomain(const std::string& id=""); |
---|
147 | void sendAddAxis(const std::string& id=""); |
---|
148 | void sendAllDomains(); |
---|
149 | void sendAllAxis(); |
---|
150 | |
---|
151 | static void recvAddDomain(CEventServer& event) ; |
---|
152 | void recvAddDomain(CBufferIn& buffer) ; |
---|
153 | static void recvAddAxis(CEventServer& event) ; |
---|
154 | void recvAddAxis(CBufferIn& buffer) ; |
---|
155 | |
---|
156 | static bool dispatchEvent(CEventServer& event) ; |
---|
157 | void outputFieldToServer(CArray<double,1>& fieldIn, int rank, CArray<double,1>& fieldOut) ; |
---|
158 | static void recvIndex(CEventServer& event) ; |
---|
159 | void recvIndex(int rank, CBufferIn& buffer) ; |
---|
160 | void sendIndex(void) ; |
---|
161 | void sendIndexScalarGrid(); |
---|
162 | |
---|
163 | void computeDomConServer(); |
---|
164 | std::map<int, int> getDomConServerSide(); |
---|
165 | std::map<int, StdSize> getConnectedServerDataSize(); |
---|
166 | std::vector<StdString> getDomainList(); |
---|
167 | std::vector<StdString> getAxisList(); |
---|
168 | std::vector<CDomain*> getDomains(); |
---|
169 | std::vector<CAxis*> getAxis(); |
---|
170 | std::vector<int> getAxisOrder(); |
---|
171 | std::vector<int> getGlobalDimension(); |
---|
172 | |
---|
173 | bool doGridHaveDataToWrite(); |
---|
174 | bool doGridHaveDataDistributed(); |
---|
175 | size_t getWrittenDataSize() const; |
---|
176 | |
---|
177 | const CDistributionServer* getDistributionServer() const; |
---|
178 | |
---|
179 | public: |
---|
180 | |
---|
181 | /// Propriétés privées /// |
---|
182 | bool isChecked; |
---|
183 | bool isDomainAxisChecked; |
---|
184 | bool isIndexSent; |
---|
185 | |
---|
186 | std::deque< CArray<int, 1>* > storeIndex ; |
---|
187 | CArray<int, 1> storeIndex_client ; |
---|
188 | |
---|
189 | map<int, CArray<int, 1>* > storeIndex_toSrv ; |
---|
190 | map<int,int> nbSenders ; |
---|
191 | |
---|
192 | map<int, CArray<size_t, 1>* > outIndexFromClient; |
---|
193 | void checkMask(void) ; |
---|
194 | |
---|
195 | private: |
---|
196 | template<int N> |
---|
197 | void checkGridMask(CArray<bool,N>& gridMask, |
---|
198 | const std::vector<CArray<bool,2>* >& domainMasks, |
---|
199 | const std::vector<CArray<bool,1>* >& axisMasks, |
---|
200 | const CArray<bool,1>& axisDomainOrder); |
---|
201 | void setVirtualDomainGroup(CDomainGroup* newVDomainGroup); |
---|
202 | void setVirtualDomainGroup(); |
---|
203 | void setVirtualAxisGroup(CAxisGroup* newVAxisGroup); |
---|
204 | void setVirtualAxisGroup(); |
---|
205 | |
---|
206 | void setAxisList(const std::vector<CAxis*> axis = std::vector<CAxis*>()); |
---|
207 | void setDomainList(const std::vector<CDomain*> domains = std::vector<CDomain*>()); |
---|
208 | |
---|
209 | void computeGridGlobalDimension(const std::vector<CDomain*>& domains, |
---|
210 | const std::vector<CAxis*>& axis, |
---|
211 | const CArray<bool,1>& axisDomainOrder); |
---|
212 | |
---|
213 | CDomain* addDomain(const std::string& id); |
---|
214 | CAxis* addAxis(const std::string& id); |
---|
215 | |
---|
216 | CAxisGroup* getVirtualAxisGroup() const; |
---|
217 | CDomainGroup* getVirtualDomainGroup() const; |
---|
218 | std::vector<int> globalDim_; |
---|
219 | private: |
---|
220 | CDomainGroup* vDomainGroup_; |
---|
221 | CAxisGroup* vAxisGroup_; |
---|
222 | std::vector<std::string> axisList_, domList_; |
---|
223 | bool isAxisListSet, isDomListSet; |
---|
224 | |
---|
225 | CDistributionClient* clientDistribution_; |
---|
226 | CDistributionServer* serverDistribution_; |
---|
227 | CServerDistributionDescription* serverDistributionDescription_; |
---|
228 | CClientServerMapping* clientServerMap_; |
---|
229 | size_t writtenDataSize_; |
---|
230 | std::map<int,size_t> connectedDataSize_; |
---|
231 | std::vector<int> connectedServerRank_; |
---|
232 | bool isDataDistributed_; |
---|
233 | }; // class CGrid |
---|
234 | |
---|
235 | ///-------------------------------------------------------------- |
---|
236 | |
---|
237 | template <int n> |
---|
238 | void CGrid::inputField(const CArray<double,n>& field, CArray<double,1>& stored) const |
---|
239 | { |
---|
240 | if (this->getDataSize() != field.numElements()) |
---|
241 | ERROR("void CGrid::inputField(const CArray<double,n>& field, CArray<double,1>& stored) const", |
---|
242 | << "[ Awaiting size of the data = " << this->getDataSize() << ", " |
---|
243 | << "Received data size = " << field.numElements() << " ] " |
---|
244 | << "The array of data has not the good size !") |
---|
245 | this->storeField_arr(field.dataFirst(), stored) ; |
---|
246 | } |
---|
247 | |
---|
248 | template <int n> |
---|
249 | void CGrid::outputField(const CArray<double,1>& stored, CArray<double,n>& field) const |
---|
250 | { |
---|
251 | if (this->getDataSize() != field.numElements()) |
---|
252 | ERROR("void CGrid::outputField(const CArray<double,1>& stored, CArray<double,n>& field) const", |
---|
253 | << "[ Size of the data = " << this->getDataSize() << ", " |
---|
254 | << "Output data size = " << field.numElements() << " ] " |
---|
255 | << "The ouput array does not have not the right size!") |
---|
256 | this->restoreField_arr(stored, field.dataFirst()); |
---|
257 | } |
---|
258 | |
---|
259 | template<int N> |
---|
260 | void CGrid::checkGridMask(CArray<bool,N>& gridMask, |
---|
261 | const std::vector<CArray<bool,2>* >& domainMasks, |
---|
262 | const std::vector<CArray<bool,1>* >& axisMasks, |
---|
263 | const CArray<bool,1>& axisDomainOrder) |
---|
264 | { |
---|
265 | int idx = 0; |
---|
266 | int numElement = axisDomainOrder.numElements(); |
---|
267 | int dim = domainMasks.size()*2 + axisMasks.size(); |
---|
268 | |
---|
269 | std::vector<int> idxLoop(dim,0), indexMap(numElement), eachDimSize(dim); |
---|
270 | std::vector<int> currentIndex(dim); |
---|
271 | int idxDomain = 0, idxAxis = 0; |
---|
272 | for (int i = 0; i < numElement; ++i) |
---|
273 | { |
---|
274 | indexMap[i] = idx; |
---|
275 | if (true == axisDomainOrder(i)) { |
---|
276 | eachDimSize[indexMap[i]] = domainMasks[idxDomain]->extent(0); |
---|
277 | eachDimSize[indexMap[i]+1] = domainMasks[idxDomain]->extent(1); |
---|
278 | idx += 2; ++idxDomain; |
---|
279 | } |
---|
280 | else { |
---|
281 | eachDimSize[indexMap[i]] = axisMasks[idxAxis]->numElements(); |
---|
282 | ++idx; ++idxAxis; |
---|
283 | } |
---|
284 | } |
---|
285 | |
---|
286 | if (!gridMask.isEmpty()) |
---|
287 | { |
---|
288 | for (int i = 0; i < dim; ++i) |
---|
289 | { |
---|
290 | if (gridMask.extent(i) != eachDimSize[i]) |
---|
291 | ERROR("CGrid::checkMask(void)", |
---|
292 | <<"The mask has one dimension whose size is different from the one of the local grid"<<endl |
---|
293 | <<"Local size is "<< i << " " << eachDimSize[i]<<endl |
---|
294 | <<"Mask dimension size is "<<gridMask.extent(i)); |
---|
295 | } |
---|
296 | } |
---|
297 | else { |
---|
298 | CArrayBoolTraits<CArray<bool,N> >::resizeArray(gridMask,eachDimSize); |
---|
299 | gridMask = true; |
---|
300 | } |
---|
301 | |
---|
302 | int ssize = gridMask.numElements(); |
---|
303 | idx = 0; |
---|
304 | while (idx < ssize) |
---|
305 | { |
---|
306 | for (int i = 0; i < dim-1; ++i) |
---|
307 | { |
---|
308 | if (idxLoop[i] == eachDimSize[i]) |
---|
309 | { |
---|
310 | idxLoop[i] = 0; |
---|
311 | ++idxLoop[i+1]; |
---|
312 | } |
---|
313 | } |
---|
314 | |
---|
315 | // Find out outer index |
---|
316 | idxDomain = idxAxis = 0; |
---|
317 | bool maskValue = true; |
---|
318 | for (int i = 0; i < numElement; ++i) |
---|
319 | { |
---|
320 | if (axisDomainOrder(i)) |
---|
321 | { |
---|
322 | maskValue = maskValue && (*domainMasks[idxDomain])(idxLoop[indexMap[i]], |
---|
323 | idxLoop[indexMap[i]+1]); |
---|
324 | ++idxDomain; |
---|
325 | } |
---|
326 | else |
---|
327 | { |
---|
328 | maskValue = maskValue && (*axisMasks[idxAxis])(idxLoop[indexMap[i]]); |
---|
329 | ++idxAxis; |
---|
330 | } |
---|
331 | } |
---|
332 | |
---|
333 | int maskIndex = idxLoop[0]; |
---|
334 | int mulDim = 1; |
---|
335 | for (int k = 1; k < dim; ++k) |
---|
336 | { |
---|
337 | mulDim *= eachDimSize[k-1]; |
---|
338 | maskIndex += idxLoop[k]*mulDim; |
---|
339 | } |
---|
340 | *(gridMask.dataFirst()+maskIndex) = maskValue; |
---|
341 | |
---|
342 | ++idxLoop[0]; |
---|
343 | ++idx; |
---|
344 | } |
---|
345 | |
---|
346 | } |
---|
347 | |
---|
348 | ///-------------------------------------------------------------- |
---|
349 | |
---|
350 | // Declare/Define CGridGroup and CGridDefinition |
---|
351 | DECLARE_GROUP(CGrid); |
---|
352 | |
---|
353 | ///-------------------------------------------------------------- |
---|
354 | |
---|
355 | } // namespace xios |
---|
356 | |
---|
357 | #endif // __XIOS_CGrid__ |
---|