1 | #!/bin/bash |
---|
2 | ############################################################# |
---|
3 | # Author : Simona Flavoni for NEMO |
---|
4 | # Contact : sflod@locean-ipsl.upmc.fr |
---|
5 | # |
---|
6 | # sette.sh : principal script of SET TEsts for NEMO (SETTE) |
---|
7 | # ---------------------------------------------------------------------- |
---|
8 | # NEMO/SETTE , NEMO Consortium (2010) |
---|
9 | # Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
---|
10 | # ---------------------------------------------------------------------- |
---|
11 | # |
---|
12 | ############################################################# |
---|
13 | #set -vx |
---|
14 | set -o posix |
---|
15 | #set -u |
---|
16 | #set -e |
---|
17 | #+ |
---|
18 | # |
---|
19 | # =================== |
---|
20 | # sette_beginner.sh |
---|
21 | # =================== |
---|
22 | # |
---|
23 | # ---------------------------------------------- |
---|
24 | # Set of tests for NEMO for beginners |
---|
25 | # ---------------------------------------------- |
---|
26 | # |
---|
27 | # SYNOPSIS |
---|
28 | # ======== |
---|
29 | # |
---|
30 | # :: |
---|
31 | # |
---|
32 | # $ ./sette_beginner.sh |
---|
33 | # |
---|
34 | # DESCRIPTION |
---|
35 | # =========== |
---|
36 | # First simple example of how to use SETTE: create GYRE_SHORT configuration, compile it with 1 proc, and test it for a SHORT test: 5days |
---|
37 | #- |
---|
38 | # |
---|
39 | # Compiler among those in NEMOGCM/ARCH |
---|
40 | COMPILER=PW6_VARGAS |
---|
41 | export BATCH_COMMAND_PAR="llsubmit" |
---|
42 | export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR |
---|
43 | export INTERACT_FLAG="no" |
---|
44 | export MPIRUN_FLAG="yes" |
---|
45 | |
---|
46 | # Directory to run the tests |
---|
47 | SETTE_DIR=$(cd $(dirname "$0"); pwd) |
---|
48 | MAIN_DIR=${SETTE_DIR%/SETTE} |
---|
49 | CONFIG_DIR=${MAIN_DIR}/CONFIG |
---|
50 | TOOLS_DIR=${MAIN_DIR}/TOOLS |
---|
51 | COMPIL_DIR=${TOOLS_DIR}/COMPILE |
---|
52 | |
---|
53 | CMP_NAM=${1:-$COMPILER} |
---|
54 | # Copy job_batch_COMPILER file for specific compiler into job_batch_template |
---|
55 | cd ${SETTE_DIR} |
---|
56 | cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit |
---|
57 | |
---|
58 | # Run for GYRE CONFIG |
---|
59 | # small test to start |
---|
60 | # compile GYRE configuration with gfortran_osx compiler run with 1 proc, by default in cpp_GYRE.fcm file : |
---|
61 | export TEST_NAME="prova_beginner" |
---|
62 | cd ${SETTE_DIR} |
---|
63 | . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_SHORT -r GYRE -j 10 add_key "key_mpp_mpi" |
---|
64 | cd ${SETTE_DIR} |
---|
65 | . param.cfg |
---|
66 | . all_functions.sh |
---|
67 | # creation of execution directory |
---|
68 | . prepare_exe_dir.sh |
---|
69 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
70 | NPROC=4 |
---|
71 | \rm $JOB_FILE |
---|
72 | cd ${EXE_DIR} |
---|
73 | # setting namelist parameters |
---|
74 | # experience name |
---|
75 | set_namelist namelist cn_exp \"GYRE_SHORT\" |
---|
76 | # first time step |
---|
77 | set_namelist namelist nn_it000 1 |
---|
78 | # last time step |
---|
79 | set_namelist namelist nn_itend 120 |
---|
80 | # frequency of creation of a restart file |
---|
81 | set_namelist namelist nn_stock 60 |
---|
82 | |
---|
83 | cd ${SETTE_DIR} |
---|
84 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
85 | # run job, with 1 processor, test named SHORT (= 60 time steps) |
---|
86 | cd ${SETTE_DIR} |
---|
87 | . ./fcm_job.sh 4 ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|