1 | #!/bin/bash -f |
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2 | #set -vx |
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3 | # |
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4 | # simple SETTE report generator. |
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5 | # |
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6 | # This version should be run in the SETTE directory. |
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7 | # The machine name will be picked up from the sette.sh script but the location of the |
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8 | # validation directory needs to be set here (currently assumed to reside in the ../CONFIG directory) |
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9 | # |
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10 | ######################################################################################### |
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11 | ######################### Start of function definitions ################################# |
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12 | ## |
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13 | |
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14 | function restfile() { |
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15 | # Rebuild ice restart for SAS CONFIG, and restartability checks. Expects LONG and SHORT run directories. |
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16 | # For Stand Alone Surface configuration ocean is not running, just run ice model; so no outputs ocean files. |
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17 | # Compares LONG rebuild restart ice file with equivalent entry from the SHORT rebuild restart ice file. |
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18 | # |
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19 | vdir=$1 |
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20 | nam=$2 |
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21 | pass=$3 |
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22 | # |
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23 | if [ -d $vdir/$nam ]; then |
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24 | dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l ` |
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25 | dorv=`echo $dorv | sed -e 's:.*/::'` |
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26 | rep1=`ls -1rt $vdir/$nam/$mach/$dorv/ | tail -2l | head -1 ` |
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27 | rep2=`ls -1rt $vdir/$nam/$mach/$dorv/ | tail -1l` |
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28 | cd ${SAS_RESTART_DIR}/LONG |
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29 | #SF add here compilation of rebuild_tools to rebuild restart files, and add comparison of restart files |
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30 | cd ${TOOLS_DIR} |
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31 | ./maketools -n REBUILD_NEMO -m ${mach} > /dev/null 2>&1 |
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32 | cd ${TOOLS_DIR}/REBUILD_NEMO |
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33 | #SF echo "REBUILD LONG restart SAS files, without standard output" |
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34 | ./rebuild_nemo -t 4 ../../CONFIG/SAS_LONG/LONG/SAS_00000100_restart_ice $NPROC > /dev/null 2>&1 |
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35 | #SF echo "REBUILD SHORT restart SAS files, without standard output" |
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36 | ./rebuild_nemo -t 4 ../../CONFIG/SAS_LONG/SHORT/SAS_00000100_restart_ice $NPROC >&- |
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37 | cd ${SAS_RESTART_DIR}/LONG |
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38 | #SF echo "COPY rebuild restart files" |
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39 | cp SAS_00000100_restart_ice.nc $vdir/$nam/$mach/$dorv/LONG/. |
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40 | cp ../SHORT/SAS_00000100_restart_ice.nc $vdir/$nam/$mach/$dorv/SHORT/. |
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41 | |
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42 | f1o=$vdir/$nam/$mach/$dorv/LONG/SAS_00000100_restart_ice.nc |
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43 | f2o=$vdir/$nam/$mach/$dorv/SHORT/SAS_00000100_restart_ice.nc |
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44 | if [ ! -f $f1o ] && [ ! -f $f2o ] ; then |
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45 | printf "%-20s %s\n" $nam " REBUILD SAS restart ice DOES NOT exists; incomplete test"; |
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46 | return; |
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47 | fi |
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48 | # |
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49 | done_oce=0 |
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50 | # |
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51 | if [ -f $f1o ] && [ -f $f2o ]; then |
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52 | cmp -s $f1o $f2o |
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53 | #SF cmp SAS_00000100_restart_ice.nc ../SHORT/SAS_00000100_restart_ice.nc > diff_restart.txt |
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54 | if [ $? == 0 ]; then |
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55 | if [ $pass == 0 ]; then |
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56 | printf "%-20s %s %s\n" $nam " SAS restart files are IDENTICAL : passed : " $dorv |
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57 | fi |
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58 | else |
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59 | printf "%-20s %s %s\n" $nam " SAS restart files are DIFFERENT : FAILED : " $dorv |
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60 | # |
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61 | # Offer view of differences on the second pass |
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62 | # |
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63 | if [ $pass == 1 ]; then |
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64 | echo "BE CAREFUL: NEED cdo to see differences!!!!! " |
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65 | echo "DO which cdo and replace cdo PATH to the cdo command in SETTE_rpt.sh " |
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66 | echo "IF cdo is not available you need to do difference of netcdf file by hand" |
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67 | echo "<return> to view restart_ice.nc differences" |
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68 | read y |
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69 | #SF cdo -diffv $f1o $f2o |
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70 | /smplocal/pub/cdo/1.5.9/bin/cdo -diffv $f1o $f2o |
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71 | done_oce=1 |
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72 | #echo "<return> to continue" |
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73 | #read y |
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74 | fi |
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75 | fi |
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76 | fi |
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77 | # |
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78 | fi |
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79 | } |
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80 | |
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81 | function resttest() { |
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82 | # |
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83 | # Restartability checks. Expects LONG and SHORT run directories |
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84 | # Compares end of LONG stat files with equivalent entries from the SHORT stat files. |
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85 | # |
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86 | vdir=$1 |
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87 | nam=$2 |
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88 | pass=$3 |
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89 | # |
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90 | if [ -d $vdir/$nam ]; then |
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91 | dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l ` |
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92 | dorv=`echo $dorv | sed -e 's:.*/::'` |
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93 | f1o=$vdir/$nam/$mach/$dorv/LONG/ocean.output |
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94 | f1s=$vdir/$nam/$mach/$dorv/LONG/run.stat |
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95 | f1t=$vdir/$nam/$mach/$dorv/LONG/tracer.stat |
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96 | f2o=$vdir/$nam/$mach/$dorv/SHORT/ocean.output |
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97 | f2s=$vdir/$nam/$mach/$dorv/SHORT/run.stat |
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98 | f2t=$vdir/$nam/$mach/$dorv/SHORT/tracer.stat |
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99 | |
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100 | if [ ! -f $f1s ] && [ ! -f $f1t ] ; then |
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101 | printf "%-20s %s\n" $nam " incomplete test"; |
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102 | return; |
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103 | fi |
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104 | if [ ! -f $f2s ] && [ ! -f $f2t ] ; then |
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105 | printf "%-20s %s\n" $nam " incomplete test"; |
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106 | return; |
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107 | fi |
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108 | # |
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109 | done_oce=0 |
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110 | |
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111 | if [ -f $f1s ] && [ -f $f2s ]; then |
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112 | nl=(`wc -l $f2s`) |
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113 | tail -${nl[0]} $f1s > f1.tmp$$ |
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114 | cmp -s f1.tmp$$ $f2s |
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115 | if [ $? == 0 ]; then |
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116 | if [ $pass == 0 ]; then |
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117 | printf "%-20s %s %s\n" $nam " run.stat restartability passed : " $dorv |
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118 | fi |
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119 | else |
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120 | printf "%-20s %s %s\n" $nam " run.stat restartability FAILED : " $dorv |
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121 | # |
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122 | # Offer view of differences on the second pass |
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123 | # |
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124 | if [ $pass == 1 ]; then |
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125 | echo "<return> to view run.stat differences" |
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126 | read y |
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127 | sdiff f1.tmp$$ $f2s |
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128 | echo "<return> to view ocean.output differences" |
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129 | read y |
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130 | sdiff $f1o $f2o | grep "|" |
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131 | done_oce=1 |
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132 | echo "<return> to continue" |
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133 | read y |
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134 | fi |
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135 | fi |
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136 | fi |
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137 | # |
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138 | # Check tracer.stat files (if they exist) |
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139 | # |
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140 | if [ -f $f1t ] && [ -f $f2t ]; then |
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141 | nl=(`wc -l $f2t`) |
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142 | tail -${nl[0]} $f1t > f1.tmp$$ |
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143 | cmp -s f1.tmp$$ $f2t |
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144 | if [ $? == 0 ]; then |
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145 | if [ $pass == 0 ]; then |
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146 | printf "%-20s %s %s\n" $nam " tracer.stat restartability passed : " $dorv |
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147 | fi |
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148 | else |
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149 | printf "%-20s %s %s\n" $nam " tracer.stat restartability FAILED : " $dorv |
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150 | # |
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151 | # Offer view of differences on the second pass |
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152 | # |
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153 | if [ $pass == 1 ]; then |
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154 | echo "<return> to view tracer.stat differences" |
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155 | read y |
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156 | sdiff f1.tmp$$ $f2t |
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157 | # |
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158 | # Only offer ocean.output view if it has not been viewed previously |
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159 | # |
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160 | if [ $done_oce == 0 ]; then |
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161 | echo "<return> to view ocean.output differences" |
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162 | read y |
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163 | sdiff $f1o $f2o | grep "|" |
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164 | fi |
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165 | echo "<return> to continue" |
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166 | read y |
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167 | fi |
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168 | fi |
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169 | fi |
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170 | rm f1.tmp$$ |
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171 | fi |
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172 | } |
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173 | |
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174 | function reprotest(){ |
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175 | # |
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176 | # Reproducibility checks. Expects REPRO_N_M and REPRO_I_J run directories |
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177 | # Compares end of stat files from each |
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178 | # |
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179 | vdir=$1 |
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180 | nam=$2 |
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181 | pass=$3 |
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182 | # |
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183 | if [ -d $vdir/$nam ]; then |
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184 | dorv=`ls -1rt $vdir/$nam/$mach/ | tail -1l ` |
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185 | dorv=`echo $dorv | sed -e 's:.*/::'` |
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186 | rep1=`ls -1rt $vdir/$nam/$mach/$dorv/ | tail -2l | head -1 ` |
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187 | rep2=`ls -1rt $vdir/$nam/$mach/$dorv/ | tail -1l` |
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188 | f1o=$vdir/$nam/$mach/$dorv/$rep1/ocean.output |
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189 | f1s=$vdir/$nam/$mach/$dorv/$rep1/run.stat |
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190 | f1t=$vdir/$nam/$mach/$dorv/$rep1/tracer.stat |
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191 | f2o=$vdir/$nam/$mach/$dorv/$rep2/ocean.output |
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192 | f2s=$vdir/$nam/$mach/$dorv/$rep2/run.stat |
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193 | f2t=$vdir/$nam/$mach/$dorv/$rep2/tracer.stat |
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194 | |
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195 | if [ ! -f $f1s ] && [ ! -f $f1t ] ; then |
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196 | printf "%-20s %s\n" $nam " incomplete test"; |
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197 | return; |
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198 | fi |
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199 | if [ ! -f $f2s ] && [ ! -f $f2t ] ; then |
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200 | printf "%-20s %s\n" $nam " incomplete test"; |
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201 | return; |
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202 | fi |
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203 | # |
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204 | done_oce=0 |
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205 | |
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206 | if [ -f $f1s ] && [ -f $f2s ] ; then |
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207 | cmp -s $f1s $f2s |
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208 | if [ $? == 0 ]; then |
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209 | if [ $pass == 0 ]; then |
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210 | printf "%-20s %s %s\n" $nam " run.stat reproducibility passed : " $dorv |
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211 | fi |
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212 | else |
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213 | printf "%-20s %s %s\n" $nam " run.stat reproducibility FAILED : " $dorv |
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214 | # |
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215 | # Offer view of differences on the second pass |
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216 | # |
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217 | if [ $pass == 1 ]; then |
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218 | echo "<return> to view run.stat differences" |
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219 | read y |
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220 | sdiff f1.tmp$$ $f2s |
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221 | echo "<return> to view ocean.output differences" |
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222 | read y |
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223 | sdiff $f1o $f2o | grep "|" |
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224 | done_oce=1 |
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225 | echo "<return> to continue" |
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226 | read y |
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227 | fi |
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228 | fi |
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229 | fi |
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230 | # |
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231 | # Check tracer.stat files (if they exist) |
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232 | # |
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233 | if [ -f $f1t ] && [ -f $f2t ] ; then |
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234 | cmp -s $f1t $f2t |
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235 | if [ $? == 0 ]; then |
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236 | if [ $pass == 0 ]; then printf "%-20s %s %s\n" $nam " tracer.stat reproducibility passed : " $dorv |
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237 | fi |
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238 | else |
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239 | printf "%-20s %s %s\n" $nam " tracer.stat reproducibility FAILED : " $dorv |
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240 | # |
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241 | # Offer view of differences on the second pass |
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242 | # |
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243 | if [ $pass == 1 ]; then |
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244 | echo "<return> to view tracer.stat differences" |
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245 | read y |
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246 | sdiff $f1t $f2t |
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247 | # |
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248 | # Only offer ocean.output view if it has not been viewed previously |
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249 | # |
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250 | if [ $done_oce == 0 ]; then |
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251 | echo "<return> to view ocean.output differences" |
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252 | read y |
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253 | sdiff $f1o $f2o | grep "|" |
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254 | fi |
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255 | echo "<return> to continue" |
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256 | read y |
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257 | fi |
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258 | fi |
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259 | fi |
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260 | fi |
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261 | } |
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262 | ########################### END of function definitions ################################# |
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263 | ## ## |
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264 | ## Main script ## |
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265 | ## ## |
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266 | ######################################################################################### |
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267 | # |
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268 | mach=`grep "COMPILER=" ./sette.sh | sed -e 's/COMPILER=//'` |
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269 | NEMO_VALID=`grep "NEMO_VALIDATION_DIR=" ./param.cfg | sed -e 's/NEMO_VALIDATION_DIR=//'` |
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270 | # Directory to run the tests |
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271 | SETTE_DIR=$(cd $(dirname "$0"); pwd) |
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272 | MAIN_DIR=$(dirname $SETTE_DIR) |
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273 | CONFIG_DIR0=${MAIN_DIR}/CONFIG |
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274 | TOOLS_DIR=${MAIN_DIR}/TOOLS |
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275 | COMPIL_DIR=${TOOLS_DIR}/COMPILE |
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276 | NPROC=32 |
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277 | |
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278 | SAS_RESTART_DIR=${CONFIG_DIR0}/SAS_LONG |
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279 | # |
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280 | if [ ! -d $NEMO_VALID ]; then |
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281 | echo "$NEMO_VALID validation directory not found" |
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282 | exit |
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283 | fi |
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284 | # |
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285 | |
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286 | # The script also needs the date or revision tag. Currently this is taken from the latest sub-directory found in each directory |
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287 | # |
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288 | for pass in 0 1 |
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289 | do |
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290 | # |
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291 | if [ $pass == 1 ]; then echo "---------------2nd pass------------------";fi |
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292 | # |
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293 | |
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294 | # Rebuild and restartability test for SAS |
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295 | # |
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296 | for restart_file in WSAS_LONG |
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297 | do |
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298 | # restfile $SAS_RESTART_DIR LONG $pass |
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299 | restfile $NEMO_VALID $restart_file $pass |
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300 | done |
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301 | # |
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302 | # Restartability test |
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303 | # |
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304 | for restart_test in WGYREPIS_LONG WORCA2SI3PIS_LONG WORCA2OFFPIS_LONG WAMM12_LONG WISOMIP_LONG WORCA2AGUL_LONG |
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305 | do |
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306 | resttest $NEMO_VALID $restart_test $pass |
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307 | done |
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308 | # |
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309 | # Reproducibility tests |
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310 | # |
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311 | for repro_test in WGYREPIS_32 WORCA2SI3PIS_32 WORCA2OFFPIS_32 WAMM12_32 WISOMIP_32 WORCA2_SI3_OBS WORCA2AGUL_1_2 WORCA2AGUL_16 WORCA2AGUL_2_2_NAG |
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312 | do |
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313 | reprotest $NEMO_VALID $repro_test $pass |
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314 | done |
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315 | # |
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316 | done |
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317 | exit |
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