Changeset 12348
- Timestamp:
- 2020-01-28T17:16:19+01:00 (5 years ago)
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- 1 edited
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NEMO/branches/2019/dev_r11708_aumont_PISCES_QUOTA/cfgs/SHARED/namelist_pisces_ref
r11536 r12348 56 56 lthet = 1.0 ! Proportional loss of ligands due to Fe uptake 57 57 ! ! ln_p5z enabled 58 no3rat3 = 0.1 82! N/C ratio in zooplankton59 po4rat3 = 0.0094 58 no3rat3 = 0.151 ! N/C ratio in zooplankton 59 po4rat3 = 0.00943 ! P/C ratio in zooplankton 60 60 / 61 61 !----------------------------------------------------------------------- … … 75 75 xsizern = 3.0 ! Size ratio for nanophytoplankton 76 76 xsizerd = 3.0 ! Size ratio for diatoms 77 xksi1 = 2.E-6 ! half saturation constant for Si uptake77 xksi1 = 4.E-6 ! half saturation constant for Si uptake 78 78 xksi2 = 20E-6 ! half saturation constant for Si/C 79 79 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization … … 87 87 !----------------------------------------------------------------------- 88 88 concnno3 = 3e-6 ! Nitrate half saturation of nanophytoplankton 89 concpno3 = 1e-690 concdno3 = 4E-6 ! Phosphate half saturation for diatoms91 concnnh4 = 1 .5E-6! NH4 half saturation for phyto92 concpnh4 = 4E-793 concdnh4 = 2E-6! NH4 half saturation for diatoms89 concpno3 = 8e-7 90 concdno3 = 5E-6 ! Phosphate half saturation for diatoms 91 concnnh4 = 1E-6 ! NH4 half saturation for phyto 92 concpnh4 = 2.3E-7 93 concdnh4 = 1.7E-6 ! NH4 half saturation for diatoms 94 94 concnpo4 = 3E-6 ! PO4 half saturation for phyto 95 concppo4 = 1.5E-696 concdpo4 = 4E-6 ! PO4 half saturation for diatoms95 concppo4 = 8E-7 96 concdpo4 = 5E-6 ! PO4 half saturation for diatoms 97 97 concnfer = 3E-9 ! Iron half saturation for phyto 98 concpfer = 1.5E-999 concdfer = 4E-9 ! Iron half saturation for diatoms98 concpfer = 8E-10 99 concdfer = 5E-9 ! Iron half saturation for diatoms 100 100 concbfe = 1.E-11 ! Half-saturation for Fe limitation of Bacteria 101 101 concbnh4 = 1.E-7 ! NH4 half saturation for phyto … … 104 104 xsizedia = 1.E-6 ! Minimum size criteria for diatoms 105 105 xsizephy = 1.E-6 ! Minimum size criteria for phyto 106 xsizepic = 1.E-6107 xsizern = 1.0 ! Size ratio for nanophytoplankton108 xsizerp = 1.0106 xsizepic = 5.E-7 ! Minimum size criteria for picophyto 107 xsizern = 3.0 ! Size ratio for nanophytoplankton 108 xsizerp = 2.0 ! Size ratio for picophytoplankton 109 109 xsizerd = 4.0 ! Size ratio for diatoms 110 xksi1 = 2.E-6 ! half saturation constant for Si uptake110 xksi1 = 8.E-6 ! half saturation constant for Si uptake 111 111 xksi2 = 20E-6 ! half saturation constant for Si/C 112 112 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization 113 caco3r = 0. 35! mean rain ratio113 caco3r = 0.5 ! mean rain ratio 114 114 oxymin = 1.E-6 ! Half-saturation constant for anoxia 115 115 / … … 120 120 qfpopt = 7.E-6 ! Optimal Fe quota of picophyto 121 121 qfdopt = 7.E-6 ! Optimal quota of diatoms 122 qnnmin = 0. 29! Minimal N quota for nano123 qnnmax = 1. 39! Maximal N quota for nano124 qpnmin = 0.2 8! Minimal P quota for nano125 qpnmax = 1. 06! Maximal P quota for nano126 qnpmin = 0.42! Minimal N quota for pico127 qnpmax = 1. 39! Maximal N quota for pico128 qppmin = 0. 25! Minimal P quota for pico129 qppmax = 0.7! Maximal P quota for pico130 qndmin = 0. 25! Minimal N quota for diatoms131 qndmax = 1. 39! Maximal N quota for diatoms132 qpdmin = 0.2 9! Minimal P quota for diatoms133 qpdmax = 1. 32! Maximal P quota for diatoms134 qfnmax = 40E-6 ! Maximal Fe quota for nano135 qfpmax = 40E-6 ! Maximal Fe quota for pico136 qfdmax = 40E-6 ! Maximal Fe quota for diatoms122 qnnmin = 0.61 ! Minimal N quota for nano 123 qnnmax = 1.25 ! Maximal N quota for nano 124 qpnmin = 0.24 ! Minimal P quota for nano 125 qpnmax = 1.35 ! Maximal P quota for nano 126 qnpmin = 1.04 ! Minimal N quota for pico 127 qnpmax = 1.525 ! Maximal N quota for pico 128 qppmin = 0.19 ! Minimal P quota for pico 129 qppmax = 1.15 ! Maximal P quota for pico 130 qndmin = 0.53 ! Minimal N quota for diatoms 131 qndmax = 1.25 ! Maximal N quota for diatoms 132 qpdmin = 0.24 ! Minimal P quota for diatoms 133 qpdmax = 1.525 ! Maximal P quota for diatoms 134 qfnmax = 80E-6 ! Maximal Fe quota for nano 135 qfpmax = 80E-6 ! Maximal Fe quota for pico 136 qfdmax = 80E-6 ! Maximal Fe quota for diatoms 137 137 / 138 138 !----------------------------------------------------------------------- … … 160 160 fecnm = 40E-6 ! Maximum Fe/C in nanophytoplankton 161 161 fecdm = 40E-6 ! Maximum Fe/C in diatoms 162 grosip = 0.1 59! mean Si/C ratio162 grosip = 0.13 ! mean Si/C ratio 163 163 / 164 164 !----------------------------------------------------------------------- 165 165 &namp5zprod ! parameters for phytoplankton growth for PISCES quota- ln_p5z 166 166 !----------------------------------------------------------------------- 167 pislopen = 3. ! P-I slope168 pislopep = 3. ! P-I slope for picophytoplankton169 pisloped = 3. ! P-I slope for diatoms167 pislopen = 4. ! P-I slope of nanophytoplankton 168 pislopep = 4. ! P-I slope for picophytoplankton 169 pisloped = 4. ! P-I slope for diatoms 170 170 excretn = 0.05 ! excretion ratio of phytoplankton 171 171 excretp = 0.05 ! excretion ratio of picophytoplankton … … 173 173 xadap = 0. ! Adaptation factor to low light 174 174 bresp = 0.02 ! Basal respiration rate 175 thetannm = 0. 25! Maximum Chl/N in nanophytoplankton176 thetanpm = 0. 25! Maximum Chl/N in picophytoplankton177 thetandm = 0. 3! Maximum Chl/N in diatoms175 thetannm = 0.3 ! Maximum Chl/N in nanophytoplankton 176 thetanpm = 0.3 ! Maximum Chl/N in picophytoplankton 177 thetandm = 0.4 ! Maximum Chl/N in diatoms 178 178 chlcmin = 0.004 ! Minimum Chl/c in phytoplankton 179 grosip = 0.1 31! mean Si/C ratio179 grosip = 0.11 ! mean Si/C ratio 180 180 / 181 181 !----------------------------------------------------------------------- … … 194 194 wchlp = 0.01 ! quadratic mortality of picophytoplankton 195 195 wchld = 0.01 ! maximum quadratic mortality of diatoms 196 wchldm = 0.0 2! maximum quadratic mortality of diatoms196 wchldm = 0.03 ! maximum quadratic mortality of diatoms 197 197 mpratn = 0.01 ! nanophytoplankton mortality rate 198 198 mpratp = 0.01 ! picophytoplankton mortality rate 199 mprat 2= 0.01 ! Diatoms mortality rate199 mpratd = 0.01 ! Diatoms mortality rate 200 200 / 201 201 !----------------------------------------------------------------------- … … 226 226 !----------------------------------------------------------------------- 227 227 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 228 grazrat2 = 0. 85 ! maximal mesozoo grazing rate228 grazrat2 = 0.75 ! maximal mesozoo grazing rate 229 229 bmetexc2 = .true. ! Metabolic use of excess carbon 230 230 resrat2 = 0.005 ! exsudation rate of mesozooplankton 231 mzrat2 = 0.0 2! mesozooplankton mortality rate231 mzrat2 = 0.03 ! mesozooplankton mortality rate 232 232 xpref2d = 1. ! zoo preference for phyto 233 xpref2 p = 1. ! zoo preference for POC233 xpref2n = 0.3 ! zoo preference for nano 234 234 xpref2z = 1. ! zoo preference for zoo 235 xpref2m = 0. 2! meso preference for zoo235 xpref2m = 0.1 ! meso preference for zoo 236 236 xpref2c = 0.3 ! zoo preference for poc 237 237 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton … … 243 243 xkgraz2 = 20.E-6 ! half sturation constant for meso grazing 244 244 epsher2 = 0.5 ! Efficicency of Mesozoo growth 245 epsher2min = 0. 2! Minimum efficiency of mesozoo growth245 epsher2min = 0.5 ! Minimum efficiency of mesozoo growth 246 246 ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM 247 247 srespir2 = 0.2 ! Active respiration … … 275 275 !----------------------------------------------------------------------- 276 276 part = 0.5 ! part of calcite not dissolved in microzoo gutsa 277 grazrat = 2.75! maximal zoo grazing rate277 grazrat = 3.0 ! maximal zoo grazing rate 278 278 bmetexc = .true. ! Metabolic use of excess carbon 279 279 resrat = 0.03 ! exsudation rate of zooplankton 280 mzrat = 0.00 5! zooplankton mortality rate280 mzrat = 0.004 ! zooplankton mortality rate 281 281 xprefc = 0.1 ! Microzoo preference for POM 282 xprefn = 1. 283 xprefp = 1. 6! Microzoo preference for picophyto284 xprefd = 1.0! Microzoo preference for Diatoms285 xprefz = 0. 3! Microzoo preference for microzooplankton282 xprefn = 1.0 ! Microzoo preference for Nanophyto 283 xprefp = 1.0 ! Microzoo preference for picophyto 284 xprefd = 0.8 ! Microzoo preference for Diatoms 285 xprefz = 0.1 ! Microzoo preference for microzooplankton 286 286 xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton 287 287 xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton … … 292 292 xkgraz = 20.E-6 ! half sturation constant for grazing 293 293 epsher = 0.5 ! Efficiency of microzoo growth 294 epshermin = 0. 2! Minimum efficiency of microzoo growth294 epshermin = 0.5 ! Minimum efficiency of microzoo growth 295 295 ssigma = 0.5 ! Fraction excreted as semi-labile DOM 296 296 srespir = 0.2 ! Active respiration … … 320 320 ! ! ln_p5z 321 321 xremikc = 0.25 ! remineralization rate of DOC 322 xremikn = 0.3 5! remineralization rate of DON322 xremikn = 0.3 ! remineralization rate of DON 323 323 xremikp = 0.4 ! remineralization rate of DOP 324 ! feratb = 20E-6 ! Bacterial Fe/C ratio324 ! feratb = 40E-6 ! Bacterial Fe/C ratio 325 325 ! xkferb = 3E-10 ! Half-saturation constant for bact. Fe/C 326 326 / … … 332 332 rshape = 1.0 ! Shape of the gamma function 333 333 ! ! ln_p5z 334 xremipc = 0.02 335 xremipn = 0.0 25! remineralisation rate of PON336 xremipp = 0.03 334 xremipc = 0.028 ! remineralisation rate of POC 335 xremipn = 0.03 ! remineralisation rate of PON 336 xremipp = 0.035 ! remineralisation rate of POP 337 337 / 338 338 !-----------------------------------------------------------------------
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