Changeset 7709 for branches/NERC
- Timestamp:
- 2017-02-21T16:46:07+01:00 (8 years ago)
- Location:
- branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM
- Files:
-
- 3 deleted
- 6 edited
-
CONFIG/SHARED/XIOS2/iodef_medusa_et_al.xml (modified) (9 diffs)
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CONFIG/SHARED/field_def_bgc_CMIP6.xml (deleted)
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CONFIG/SHARED/field_def_bgc_rev-7112.xml (deleted)
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CONFIG/SHARED/field_def_dyn_rev7515.xml (deleted)
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NEMO/OPA_SRC/nemogcm.F90 (modified) (2 diffs)
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NEMO/TOP_SRC/MEDUSA/trcnam_medusa.F90 (modified) (2 diffs)
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NEMO/TOP_SRC/trc.F90 (modified) (1 diff)
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NEMO/TOP_SRC/trcini.F90 (modified) (1 diff)
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NEMO/TOP_SRC/trcstp.F90 (modified) (2 diffs)
Legend:
- Unmodified
- Added
- Removed
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branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM/CONFIG/SHARED/XIOS2/iodef_medusa_et_al.xml
r7516 r7709 1 1 <!-- GO6.0 version of the XIOS namelist --> 2 <!-- XIOS2 version namelist --> 3 2 <!-- XIOS version 2 --> 4 3 <?xml version="1.0"?> 4 5 5 <simulation> 6 6 7 <context id="nemo" 7 <context id="nemo"> 8 8 9 9 <!-- $id$ --> … … 15 15 ============================================================================================================ 16 16 --> 17 <field_definition src="./field_def_bgc.xml"/> 17 18 <field_definition src="./field_def.xml"/> 18 <field_definition src="./field_def_bgc.xml"/>19 19 <!-- 20 20 ============================================================================================================ … … 24 24 ============================================================================================================ 25 25 --> 26 27 <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1 0d" min_digits="4">26 27 <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4"> 28 28 29 29 <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> … … 33 33 <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files --> 34 34 <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files --> 35 <file_group id="6h" output_freq="6h" output_level="10" enabled=".FALSE."> <!-- 6h files --> 36 <file id="file8" name_suffix="_UK_shelf" description="Forcings for the UK shelf seas model" > 37 <field field_ref="toce" name="votemper" grid_ref="grid_T_3D_zoom" operation="instant" standard_name="sea_water_potential_temperature"/> 38 <field field_ref="soce" name="vosaline" grid_ref="grid_T_3D_zoom" operation="instant" standard_name="sea_water_salinity"/> 39 <field field_ref="ssh" name="sossheig" grid_ref="grid_T_2D_zoom" operation="instant" standard_name="sea_surface_height_above_geoid"/> 40 <field field_ref="uoce" name="vozocrtx" grid_ref="grid_U_3D_zoom" operation="instant" standard_name="sea_water_x_velocity"/> 41 <field field_ref="voce" name="vomecrty" grid_ref="grid_V_3D_zoom" operation="instant" standard_name="sea_water_y_velocity"/> 42 <field field_ref="ubar" name="ubar" grid_ref="grid_U_3D_zoom" operation="instant" standard_name="ocean_barotropic_current_along_i-axis"/> 43 <field field_ref="vbar" name="vbar" grid_ref="grid_V_3D_zoom" operation="instant" standard_name="ocean_barotropic_current_along_j-axis"/> 44 </file> 45 </file_group> 35 <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files --> 46 36 47 37 <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files --> 48 38 <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files --> 49 39 50 <file_group id="10d" output_freq="10d" output_level="10" enabled=".TRUE."> <!-- 10d files --> 51 40 <file_group id="10d" output_freq="10d" output_level="10" enabled=".TRUE."/> <!-- 10d files --> 41 <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- 1m files --> 42 52 43 <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" > 53 <field_group group_ref="SPIN-UP_T" /> 44 <field field_ref="e3t" name="e3t" standard_name="cell_thickness" /> 45 <field field_ref="toce" name="votemper" operation="average" freq_op="1mo" > @toce_e3t / @e3t </field> 46 <field field_ref="toce" name="votemper2" operation="average" freq_op="1mo" > @toce2_e3t / @e3t </field> 47 <field field_ref="soce" name="vosaline" operation="average" freq_op="1mo" > @soce_e3t / @e3t </field> 48 <field field_ref="soce" name="vosaline2" operation="average" freq_op="1mo" > @soce2_e3t / @e3t </field> 49 <field field_ref="ttrd_totad" name="opottempadvect" operation="average" freq_op="1mo" > @ttrd_totad_e3t * 1026.0 * 3991.86795711963 </field> 50 <field field_ref="ttrd_iso" name="opottemppmdiff" operation="average" freq_op="1mo" > @ttrd_iso_e3t * 1026.0 * 3991.86795711963 </field> 51 <field field_ref="ttrd_zdfp" name="opottempdiff" operation="average" freq_op="1mo" > @ttrd_zdfp_e3t * 1026.0 * 3991.86795711963 </field> 52 <field field_ref="ttrd_evd" name="ttrd_evd" operation="average" freq_op="1mo" > @ttrd_evd_e3t / @e3t </field> 53 <field field_ref="ttrd_qns" name="ttrd_qns" operation="average" freq_op="1mo" > @ttrd_qns_e3t / @e3t_surf </field> 54 <field field_ref="ttrd_qsr" name="rsdoabsorb" operation="average" freq_op="1mo" > @ttrd_qsr_e3t * 1026.0 * 3991.86795711963 </field> 55 <field field_ref="ttrd_bbl" name="ttrd_bbl" operation="average" freq_op="1mo" > @ttrd_bbl_e3t / @e3t </field> 56 <field field_ref="ttrd_tot" name="opottemptend" operation="average" freq_op="1mo" > @ttrd_tot_e3t * 1026.0 * 3991.86795711963 </field> 57 <field field_ref="strd_totad" name="osaltadvect" operation="average" freq_op="1mo" > @strd_totad_e3t * 1026.0 * 0.001 </field> 58 <field field_ref="strd_iso" name="osaltpmdiff" operation="average" freq_op="1mo" > @strd_iso_e3t * 1026.0 * 0.001 </field> 59 <field field_ref="strd_zdfp" name="osaltdiff" operation="average" freq_op="1mo" > @strd_zdfp_e3t * 1026.0 * 0.001 </field> 60 <field field_ref="strd_evd" name="strd_evd" operation="average" freq_op="1mo" > @strd_evd_e3t / @e3t </field> 61 <field field_ref="strd_tot" name="osalttend" operation="average" freq_op="1mo" > @strd_tot_e3t * 1026.0 * 0.001 </field> 62 <field field_ref="strd_bbl" name="strd_bbl" operation="average" freq_op="1mo" > @strd_bbl_e3t / @e3t </field> 63 <field field_ref="ssh" name="sossheig" standard_name="sea_surface_height_above_geoid" /> 64 <field field_ref="ssh2" name="zossq" standard_name="square_of_sea_surface_height_above_geoid" /> 65 <field field_ref="empmr" name="sowaflup" standard_name="water_flux_out_of_sea_ice_and_sea_water" /> 66 <field field_ref="saltflx" name="sosafldo" standard_name="salt_flux_into_sea_water" /> 67 <field field_ref="qt" name="sohefldo" standard_name="surface_downward_heat_flux_in_sea_water" /> 68 <field field_ref="qsr" name="soshfldo" standard_name="downwelling_photosynthetic_radiative_flux_in_sea_water" /> 69 <field field_ref="mldkz5" name="somixhgt" standard_name="ocean_mixed_layer_thickness_defined_by_vertical_tracer_diffusivity" /> 70 <field field_ref="mldr10_1" name="somxl010" standard_name="ocean_mixed_layer_thickness_defined_by_sigma_theta" /> 71 <field field_ref="mldzint_1" name="sokaraml" standard_name="ocean_mixed_layer_thickness" /> 72 <field field_ref="mldzint_2" name="somlddbm" standard_name="ocean_mixed_layer_thickness" /> 73 <field field_ref="ice_cover" name="soicecov" standard_name="sea_ice_area_fraction" /> 74 <field field_ref="wspd" name="sowindsp" standard_name="wind_speed" /> 75 <field field_ref="qhcisf" name="sohflisf" standard_name="ice_shelf_heat_flux" /> 76 <field field_ref="qlatisf" name="soqlatisf" standard_name="ice_shelf_latent_heat_flux" /> 77 <field field_ref="fwfisf" name="sowflisf" standard_name="ice_shelf_melting" /> 78 <field field_ref="berg_total_melt" name="berg_total_melt" standard_name="" /> 79 <field field_ref="berg_total_heat_flux" name="berg_total_heat_flux" standard_name="" /> 80 <field field_ref="runoffs" name="sorunoff" standard_name="water_flux_into_sea_water_from_rivers" /> 81 <field field_ref="hflx_rain_cea" name="hfrainds" standard_name="temperature_flux_due_to_rainfall_expressed_as_heat_flux_into_sea_water"/> 82 <field field_ref="hflx_evap_cea" name="hfevapds" standard_name="temperature_flux_due_to_evaporation_expressed_as_heat_flux_out_of_sea_water"/> 83 <field field_ref="evap_ao_cea" name="evap_ao_cea" standard_name="water_evaporation_flux" /> 84 <field field_ref="rain" name="pr" standard_name="rainfall_flux" /> 85 <field field_ref="snowpre" name="snowpre" standard_name="snowfall_flux" /> 86 <field field_ref="snow_ao_cea" name="snow_ao_cea" standard_name="snowfall_flux_over_ocean" /> 87 <field field_ref="snow_ai_cea" name="snow_ai_cea" standard_name="snowfall_flux_over_sea_ice" /> 54 88 </file> 55 89 56 90 <file id="file2" name_suffix="_grid_U" description="ocean U grid variables" > 57 <field_group group_ref="SPIN-UP_U" /> 91 <field field_ref="e3u" name="e3u" standard_name="cell_thickness" /> 92 <field field_ref="uoce" name="vozocrtx" operation="average" freq_op="1mo" > @uoce_e3u / @e3u </field> 93 <field field_ref="uoce" name="vozocrtx2" operation="average" freq_op="1mo" > @uoce2_e3u / @e3u </field> 94 <field field_ref="ut" name="ut" operation="average" freq_op="1mo" > @ut_e3u / @e3u </field> 95 <field field_ref="us" name="us" operation="average" freq_op="1mo" > @us_e3u / @e3u </field> 96 <field field_ref="utau" name="sozotaux" standard_name="surface_downward_x_stress" /> 58 97 </file> 59 98 60 99 <file id="file3" name_suffix="_grid_V" description="ocean V grid variables" > 61 <field_group group_ref="SPIN-UP_V" /> 62 </file> 63 100 <field field_ref="e3v" name="e3v" standard_name="cell_thickness" /> 101 <field field_ref="voce" name="vomecrty" operation="average" freq_op="1mo" > @voce_e3v / @e3v </field> 102 <field field_ref="voce" name="vomecrty2" operation="average" freq_op="1mo" > @voce2_e3v / @e3v </field> 103 <field field_ref="vt" name="vt" operation="average" freq_op="1mo" > @vt_e3v / @e3v </field> 104 <field field_ref="vs" name="vs" operation="average" freq_op="1mo" > @vs_e3v / @e3v </field> 105 <field field_ref="vtau" name="sometauy" standard_name="surface_downward_y_stress" /> 106 </file> 107 64 108 <file id="file4" name_suffix="_grid_W" description="ocean W grid variables" > 65 <field_group group_ref="SPIN-UP_W" /> 66 </file> 67 68 <file id="file5" name_suffix="_diaptr" description="process diagnostics" > 69 <field_group group_ref="SPIN-UP_diaptr" /> 70 </file> 71 109 <field field_ref="woce" name="vovecrtz" standard_name="upward_sea_water_velocity" /> 110 <field field_ref="wt" name="wt" standard_name="" /> 111 <field field_ref="ws" name="ws" standard_name="" /> 112 <field field_ref="avt" name="votkeavt" standard_name="ocean_vertical_heat_diffusivity" /> 113 <field field_ref="avm" name="votkeavm" standard_name="ocean_vertical_momentum_diffusivity" /> 114 <field field_ref="aht2d" name="soleahtw" standard_name="vertical_component_of_ocean_xy_tracer_diffusivity" /> 115 </file> 116 117 <file id="file5" name_suffix="_diaptr" description="processed diagnostics" > 118 <field field_ref="zomsfglo" name="zomsfglo" standard_name="meridional_streamfunction_global" grid_ref="gznl_W_3D" /> 119 <field field_ref="zotemglo" name="zotemglo" standard_name="zonal_mean_temperature_global" grid_ref="gznl_T_3D" /> 120 <field field_ref="zosrfglo" name="zosrfglo" standard_name="zonal_mean_surface_global" grid_ref="gznl_T_3D" /> 121 <field field_ref="zosalglo" name="zosalglo" standard_name="zonal_mean_salinity_global" grid_ref="gznl_T_3D" /> 122 <field field_ref="zomsfatl" name="zomsfatl" standard_name="meridional_streamfunction_atlantic" grid_ref="gznl_W_3D" /> 123 <field field_ref="zotematl" name="zotematl" standard_name="zonal_mean_temperature_atlantic" grid_ref="gznl_T_3D" /> 124 <field field_ref="zosrfatl" name="zosrfatl" standard_name="zonal_mean_surface_atlantic" grid_ref="gznl_T_3D" /> 125 <field field_ref="zosalatl" name="zosalatl" standard_name="zonal_mean_salinity_atlantic" grid_ref="gznl_T_3D" /> 126 <field field_ref="zomsfpac" name="zomsfpac" standard_name="meridional_streamfunction_pacific" grid_ref="gznl_W_3D" /> 127 <field field_ref="zotempac" name="zotempac" standard_name="zonal_mean_temperature_pacific" grid_ref="gznl_T_3D" /> 128 <field field_ref="zosrfpac" name="zosrfpac" standard_name="zonal_mean_surface_pacific" grid_ref="gznl_T_3D" /> 129 <field field_ref="zosalpac" name="zosalpac" standard_name="zonal_mean_salinity_pacific" grid_ref="gznl_T_3D" /> 130 <field field_ref="zomsfind" name="zomsfind" standard_name="meridional_streamfunction_indian" grid_ref="gznl_W_3D" /> 131 <field field_ref="zotemind" name="zotemind" standard_name="zonal_mean_temperature_indian" grid_ref="gznl_T_3D" /> 132 <field field_ref="zosrfind" name="zosrfind" standard_name="zonal_mean_surface_indian" grid_ref="gznl_T_3D" /> 133 <field field_ref="zosalind" name="zosalind" standard_name="zonal_mean_salinity_indian" grid_ref="gznl_T_3D" /> 134 <field field_ref="zomsfipc" name="zomsfipc" standard_name="meridional_streamfunction_indian_pacific" grid_ref="gznl_W_3D" /> 135 <field field_ref="zotemipc" name="zotemipc" standard_name="zonal_mean_temperature_indian_pacific" grid_ref="gznl_T_3D" /> 136 <field field_ref="zosrfipc" name="zosrfipc" standard_name="zonal_mean_surface_indian_pacific" grid_ref="gznl_T_3D" /> 137 <field field_ref="zosalipc" name="zosalipc" standard_name="zonal_mean_salinity_indian_pacific" grid_ref="gznl_T_3D" /> 138 <field field_ref="sophtadv" name="sophtadv" standard_name="advective_heat_transport" grid_ref="gznl_T_2D" /> 139 <field field_ref="sopstadv" name="sopstadv" standard_name="advective_salt_transport" grid_ref="gznl_T_2D" /> 140 <field field_ref="sophtldf" name="sophtldf" standard_name="diffusive_heat_transport" grid_ref="gznl_T_2D" /> 141 <field field_ref="sopstldf" name="sopstldf" standard_name="diffusive_salt_transport" grid_ref="gznl_T_2D" /> 142 <field field_ref="sophtadv_atl" name="sophtadv_atl" standard_name="advective_heat_transport_atlantic" grid_ref="gznl_T_2D" /> 143 <field field_ref="sopstadv_atl" name="sopstadv_atl" standard_name="advective_salt_transport_atlantic" grid_ref="gznl_T_2D" /> 144 <field field_ref="sophtldf_atl" name="sophtldf_atl" standard_name="diffusive_heat_transport_atlantic" grid_ref="gznl_T_2D" /> 145 <field field_ref="sopstldf_atl" name="sopstldf_atl" standard_name="diffusive_salt_transport_atlantic" grid_ref="gznl_T_2D" /> 146 <field field_ref="sophtadv_pac" name="sophtadv_pac" standard_name="advective_heat_transport_pacific" grid_ref="gznl_T_2D" /> 147 <field field_ref="sopstadv_pac" name="sopstadv_pac" standard_name="advective_salt_transport_pacific" grid_ref="gznl_T_2D" /> 148 <field field_ref="sophtldf_pac" name="sophtldf_pac" standard_name="diffusive_heat_transport_pacific" grid_ref="gznl_T_2D" /> 149 <field field_ref="sopstldf_pac" name="sopstldf_pac" standard_name="diffusive_salt_transport_pacific" grid_ref="gznl_T_2D" /> 150 <field field_ref="sophtadv_ind" name="sophtadv_ind" standard_name="advective_heat_transport_indian" grid_ref="gznl_T_2D" /> 151 <field field_ref="sopstadv_ind" name="sopstadv_ind" standard_name="advective_salt_transport_indian" grid_ref="gznl_T_2D" /> 152 <field field_ref="sophtldf_ind" name="sophtldf_ind" standard_name="diffusive_heat_transport_indian" grid_ref="gznl_T_2D" /> 153 <field field_ref="sopstldf_ind" name="sopstldf_ind" standard_name="diffusive_salt_transport_indian" grid_ref="gznl_T_2D" /> 154 <field field_ref="sophtadv_ipc" name="sophtadv_ipc" standard_name="advective_heat_transport_indopacific" grid_ref="gznl_T_2D" /> 155 <field field_ref="sopstadv_ipc" name="sopstadv_ipc" standard_name="advective_salt_transport_indopacific" grid_ref="gznl_T_2D" /> 156 <field field_ref="sophtldf_ipc" name="sophtldf_ipc" standard_name="diffusive_heat_transport_indopacific" grid_ref="gznl_T_2D" /> 157 <field field_ref="sopstldf_ipc" name="sopstldf_ipc" standard_name="diffusive_salt_transport_indopacific" grid_ref="gznl_T_2D" /> 158 </file> 159 72 160 <file id="file6" name_suffix="_ptrc_T" description="Medusa sms variables" > 73 161 <field_group group_ref="groupMEDUSA" /> 74 162 <field_group group_ref="groupIDTRA" /> 75 163 <field_group group_ref="groupCFC" /> 164 <field_group group_ref="groupAGE" /> 76 165 </file> 77 166 78 167 <file id="file7" name_suffix="_diad_T" description="Medusa diagnostic variables" > 79 <field_group group_ref="groupMEDUSA_dia" /> 80 <field_group group_ref="groupMEDUSA_3dd" /> 168 <field_group group_ref="groupMEDUSA_dia" /> 169 <field_group group_ref="groupMEDUSA_3dd" /> 81 170 <field_group group_ref="groupMEDUSA_dms" /> 82 171 <field_group group_ref="groupIDTRA_dia" /> 83 172 <field_group group_ref="groupCFC_dia" /> 84 </file> 85 86 </file_group> 87 88 89 <!-- file_group id="1m" output_freq="1mo" split_freq="1mo" output_level="10" enabled=".TRUE." --> <!-- 1mo files --> 90 <file_group id="1m" output_freq="1mo" output_level="10" enabled=".FALSE."> <!-- 1mo files --> 91 92 <file id="file9" name_suffix="_grid_T" description="ocean T grid variables" > 93 <field_group group_ref="SPIN-UP_T" /> 94 </file> 95 96 <file id="file10" name_suffix="_grid_U" description="ocean U grid variables" > 97 <field_group group_ref="SPIN-UP_U" /> 98 </file> 99 100 <file id="file11" name_suffix="_grid_V" description="ocean V grid variables" > 101 <field_group group_ref="SPIN-UP_V" /> 102 </file> 103 104 <file id="file12" name_suffix="_grid_W" description="ocean W grid variables" > 105 <field_group group_ref="SPIN-UP_W" /> 106 </file> 107 108 <file id="file13" name_suffix="_grid_W" description="ocean W grid variables" > 109 <field_group group_ref="SPIN-UP_diaptr" /> 110 </file> 111 112 <file id="file14" name_suffix="_ptrc_T" description="Medusa sms variables" > 113 <field_group group_ref="groupMEDUSA" /> 114 <field_group group_ref="groupIDTRA" /> 115 <field_group group_ref="groupCFC" /> 116 </file> 117 118 <file id="file15" name_suffix="_diad_T" description="Medusa diagnostic variables" > 119 <field_group group_ref="groupMEDUSA_dia" /> 120 <field_group group_ref="groupMEDUSA_3dd" /> 121 <field_group group_ref="groupMEDUSA_dms" /> 122 <field_group group_ref="groupIDTRA_dia" /> 123 <field_group group_ref="groupCFC_dia" /> 173 <field_group group_ref="groupMEDUSA_cmip6" /> 124 174 </file> 125 175 … … 143 193 ============================================================================================================ 144 194 --> 145 195 146 196 <axis_definition> 147 197 <axis id="deptht" standard_name="depth" long_name="Vertical T levels" unit="m" positive="down" /> … … 151 201 <axis id="nfloat" long_name="Float number" unit="-" /> 152 202 <axis id="icbcla" long_name="Iceberg class" unit="-" /> 203 <axis id="ncatice" long_name="Ice category" unit="1" /> 204 <axis id="iax_20C" long_name="20 degC isotherm" unit="degC" /> 205 <axis id="iax_28C" long_name="28 degC isotherm" unit="degC" /> 206 <axis id="deptht_surface" axis_ref="deptht" > 207 <zoom_axis begin=" 1 " n=" 1 " /> 208 </axis> 209 153 210 </axis_definition> 154 211 155 212 <domain_definition src="./domain_def.xml"/> 156 213 157 158 <grid_definition> 214 <grid_definition> 159 215 <!-- --> 160 216 <grid id="grid_T_2D" > … … 200 256 <!-- --> 201 257 <grid id="grid_1point" > 202 <domain domain_ref="1point"/>258 <domain id="1point"/> 203 259 </grid> 204 260 <!-- --> … … 209 265 <!-- --> 210 266 <grid id="grid_EqT" > 211 <domain domain_ref="EqT" />267 <domain id="EqT" /> 212 268 </grid> 213 269 <!-- --> 214 270 <grid id="gznl_T_2D"> 215 <domain domain_ref="ptr" />271 <domain id="ptr" /> 216 272 </grid> 217 273 <!-- --> 218 274 <grid id="gznl_T_3D"> 219 <domain domain_ref="ptr" />275 <domain id="ptr" /> 220 276 <axis id="deptht" /> 221 277 </grid> 222 278 <!-- --> 223 279 <grid id="gznl_W_2D"> 224 <domain domain_ref="ptr" />280 <domain id="ptr" /> 225 281 </grid> 226 282 <!-- --> 227 283 <grid id="gznl_W_3D"> 228 <domain domain_ref="ptr" />284 <domain id="ptr" /> 229 285 <axis id="depthw" /> 230 286 </grid> 231 </grid_definition> 287 <!-- --> 288 <grid id="grid_T_surface_extract"> 289 <domain domain_ref="grid_T" /> 290 <axis axis_ref="deptht_surface" /> 291 </grid> 292 293 </grid_definition> 294 </context> 295 232 296 233 297 <context id="xios"> … … 235 299 <variable_definition> 236 300 237 <!-- 238 We must have buffer_size > jpi*jpj*jpk*8 (with jpi and jpj the subdomain size) 239 --> 240 <variable id="info_level" type="int">0</variable> 241 <variable id="using_server" type="bool">true</variable> 242 <variable id="using_oasis" type="bool">true</variable> 243 <variable id="oasis_codes_id" type="string" >toyoce</variable> 301 <variable id="info_level" type="int">0</variable> 302 <variable id="using_server" type="bool">false</variable> 303 <variable id="using_oasis" type="bool">true</variable> 304 <variable id="oasis_codes_id" type="string" >toyoce</variable> 244 305 245 306 </variable_definition> -
branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90
r7516 r7709 74 74 #if defined key_top 75 75 USE trcini ! passive tracer initialisation 76 USE trc, ONLY: numstr ! tracer stats unit number 76 77 #endif 77 78 USE lib_mpp ! distributed memory computing … … 596 597 IF( numdct_heat /= -1 ) CLOSE( numdct_heat ) ! heat transports 597 598 IF( numdct_salt /= -1 ) CLOSE( numdct_salt ) ! salt transports 599 IF( numstr /= -1 ) CLOSE( numstr ) ! tracer statistics 598 600 599 601 ! -
branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM/NEMO/TOP_SRC/MEDUSA/trcnam_medusa.F90
r7331 r7709 239 239 !! 240 240 jliebig = 0 241 jq10 = 0. 241 242 xnln = 0. 242 243 xnld = 0. … … 343 344 jdms = 0 344 345 jdms_input = 0 345 jdms_ input = 3346 jdms_model = 0 346 347 347 348 !REWIND(numnatm) -
branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM/NEMO/TOP_SRC/trc.F90
r7703 r7709 26 26 INTEGER, PUBLIC :: numnat_cfg = -1 !: logical unit for the reference passive tracer namelist_top_cfg 27 27 INTEGER, PUBLIC :: numont = -1 !: logical unit for the reference passive tracer namelist output output.namelist.top 28 INTEGER, PUBLIC :: numstr !: logical unit for tracer statistics28 INTEGER, PUBLIC :: numstr = -1 !: logical unit for tracer statistics 29 29 INTEGER, PUBLIC :: numrtr !: logical unit for trc restart (read ) 30 30 INTEGER, PUBLIC :: numrtw !: logical unit for trc restart ( write ) -
branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM/NEMO/TOP_SRC/trcini.F90
r6715 r7709 123 123 # endif 124 124 125 IF( l wp) THEN125 IF( ln_ctl ) THEN 126 126 ! 127 CALL ctl_opn( numstr, 'tracer.stat', 'REPLACE', 'FORMATTED', 'SEQUENTIAL', -1, numout, lwp , narea ) 127 IF (narea == 1) THEN 128 ! The tracer.stat file only contains global tracer sum values, if 129 ! it contains anything at all. Hence it only needs to be opened 130 ! and written to on the master PE, not on all PEs. 131 CALL ctl_opn( numstr, 'tracer.stat', 'REPLACE','FORMATTED', & 132 'SEQUENTIAL', -1, numout, lwp , narea ) 133 ENDIF 128 134 ! 129 135 ENDIF -
branches/NERC/dev_r5518_NOC_MEDUSA_Stable/NEMOGCM/NEMO/TOP_SRC/trcstp.F90
r6234 r7709 55 55 !! Update the passive tracers 56 56 !!------------------------------------------------------------------- 57 58 USE dom_oce, ONLY: narea 59 57 60 INTEGER, INTENT( in ) :: kt ! ocean time-step index 58 61 INTEGER :: jk, jn ! dummy loop indices … … 129 132 ENDIF 130 133 ! 131 ztrai = 0._wp ! content of all tracers 132 DO jn = 1, jptra 133 ztrai = ztrai + glob_sum( trn(:,:,:,jn) * cvol(:,:,:) ) 134 END DO 135 IF( lwp ) WRITE(numstr,9300) kt, ztrai / areatot 136 9300 FORMAT(i10,e18.10) 134 IF (ln_ctl) THEN 135 ! The following code is very expensive since it involves multiple 136 ! reproducible global sums over all tracer fields and is potentially 137 ! called on every timestep. The results it produces are purely for 138 ! informational purposes and do not affect model evolution. 139 ! Hence we restrict its use by protecting it with the ln_ctl RTL 140 ! which should normally only be used under debugging conditions 141 ! and not in operational runs. We also need to restrict output 142 ! to the master PE since there's no point duplicating the same results 143 ! on all processors. 144 ztrai = 0._wp ! content of all tracers 145 DO jn = 1, jptra 146 ztrai = ztrai + glob_sum( trn(:,:,:,jn) * cvol(:,:,:) ) 147 END DO 148 IF( lwp ) WRITE(numstr,9300) kt, ztrai / areatot 149 9300 FORMAT(i10,e18.10) 150 ENDIF 137 151 ! 138 152 IF( nn_timing == 1 ) CALL timing_stop('trc_stp')
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