Opened 8 weeks ago

Last modified 10 days ago

#2638 assigned Task

AGF-01_Debreu_domcfg

Reported by: smasson Owned by: ldebreu
Priority: low Milestone: 2021 WP
Component: AGRIF Version: trunk
Severity: minor Keywords:
Cc: Branch review:
MP ready?: Task progress:

Description

Workplan action

AGRIF / Configuration domain generation tool refactoring & Agrif friendly

Wikipage: wiki:2021WP/AGF-01_Debreu_domcfg

Commit History (29)

ChangesetAuthorTimeChangeLog
14721jchanut2021-04-16T16:11:55+02:00

#2638, (partially) correct bathymetry transitioning in corners + add lk_north=.false. case

14720jchanut2021-04-16T15:44:59+02:00

#2638, use i refinement factor in place of j to define e1x over child grids

14703jchanut2021-04-13T16:11:35+02:00

#2638, push restrictions in agrif mapping in case of East-West periodic or North Fold lbcs + Disable interp if lk_north=.false.

14702jchanut2021-04-13T16:08:34+02:00

#2638, push restrictions in agrif mapping in case of East-West periodic or North Fold lbcs

14698jchanut2021-04-13T14:11:15+02:00

#2638: initialize agrif ghost cells number (to zero) on root grid (DOMAINcfg)

14688jchanut2021-04-09T19:03:15+02:00

Last round of changes following r14674, r14675 and r14687 (AGRIF new grid positionning), #2638

14687jchanut2021-04-09T17:48:50+02:00

#Changes to accomodate AGRIF new grid positionning implemented at r14674 and r14675, #2638

14684jchanut2021-04-08T16:28:09+02:00

Allow chosing type of input bathymetry in child grids again (wrongly introduced @14630), #2638

14673jchanut2021-04-02T15:06:01+02:00

Update ICE_AGRIF child domain as for VORTEX (position dependent on ghost cell number), #2638

14656jchanut2021-03-30T16:44:41+02:00

Revise VORTEX child grid position by taking into account Parent grid ghosts. No need to change AGRIF_FixedGrids.in file anymore if changing the number of ghostcells, #2638

14655jchanut2021-03-30T16:41:30+02:00

AGRIF: Set ghost cell number to 0 over root grid to properly define analytical grids in zooms, #2638

14641jchanut2021-03-26T11:30:01+01:00

1) Revise boundary checking with AGRIF (unify vertical remaping case or not) 2) Disable parent volume check without vertical remaping until we sort out what to do in the damned overlapping zone. At this stage DOMAINcfg produces meshes in agreement with what NEMO expects, except for cyclic East-West child grids for which a mismatch persists at boundaries. Child grids over North Pole Fold or East-West boundaries are however correct, #2638

14640jchanut2021-03-26T11:04:11+01:00

AGFdomcfg: slight changes in boundary matching location to comply with what is expected in NEMO, #2638

14634jchanut2021-03-24T11:06:04+01:00

AGFdomcfg: temporary removal of lbclnk in procnames: this prevents using the tool in mpp mode, #2638

14633jchanut2021-03-24T11:01:30+01:00

AGFdomcfg: fixes internal flags in the East-West periodic case and in cmems demo, #2638

14630jchanut2021-03-23T16:19:36+01:00

AGFdomcfg: 1) restore use of analytical grids (i.e. case where jphgr_msh>0). That may be useful to set up test cases with AGRIF. 2) Add random topography over a flat bottom if nn_bathy = -1 (in place of a Gaussian bump). This illustrates well where the interface matching and update are done. #2638

14629jchanut2021-03-23T12:06:11+01:00

AGFdomcfg: add missing block in reference namelists, #2638

14628jchanut2021-03-22T16:33:44+01:00

AGFdomcfg: Fixes a couple of tiny compilation problems #2638

14626ldebreu2021-03-21T19:47:16+01:00

AGFdomcfg: Update make_namelist.py (Use of NiGlo0, NjGlo0 instead of jpiglo, jpjglo #2638

14625ldebreu2021-03-21T19:46:12+01:00

AGFdomcfg: Update AGRIF_FixedGrids.in, put an updated version for the AGRIF_DEMO test #2638

14624ldebreu2021-03-21T19:44:51+01:00

AGFdomcfg: Update namelist files (jpiglo, jpjglo are replaced by NiGlo0, NjGlo0 version #2638

14623ldebreu2021-03-21T19:40:22+01:00

AGFdomcfg: 1) Update DOMAINcfg to be compliant with the removal of halo cells 2) Update most of the LBC … subroutines to a recent NEMO 4 version #2638

14622ldebreu2021-03-21T19:36:08+01:00

AGFdomcfg: 1) define some AGRIF variables in real8 2) remove the wrong indices translation in modarrays #2638

14621ldebreu2021-03-21T19:30:00+01:00

AGFdomcfg: allow the conv to understand the IOMSG keyworkd #2638

14620ldebreu2021-03-21T19:27:59+01:00

AGFdomcfg: allow the conv to understand the IOMSG keyworkd #2638

14619ldebreu2021-03-21T19:25:43+01:00

AGFdomcfg:uncomment the call to agrif_set_external_mapping, call agrif_nemo_init even on the root grid #2638

14613smasson2021-03-15T17:05:32+01:00

AGFdomcfg: change svn:externals to use AGRIF/dev_r14608_AGRIF_domcfg, #2638

14612smasson2021-03-15T17:02:18+01:00

AGFdomcfg: create AGRIF dev branch, #2638

14610smasson2021-03-15T16:55:57+01:00

AGFdomcfg: create dev branch, #2638

Change History (30)

comment:1 Changed 8 weeks ago by smasson

In 14610:

AGFdomcfg: create dev branch, #2638

comment:2 Changed 8 weeks ago by smasson

In 14612:

AGFdomcfg: create AGRIF dev branch, #2638

comment:3 Changed 8 weeks ago by smasson

In 14613:

AGFdomcfg: change svn:externals to use AGRIF/dev_r14608_AGRIF_domcfg, #2638

comment:4 Changed 7 weeks ago by ldebreu

In 14619:

AGFdomcfg:uncomment the call to agrif_set_external_mapping, call agrif_nemo_init even on the root grid #2638

comment:5 Changed 7 weeks ago by ldebreu

In 14620:

AGFdomcfg: allow the conv to understand the IOMSG keyworkd #2638

comment:6 Changed 7 weeks ago by ldebreu

In 14621:

AGFdomcfg: allow the conv to understand the IOMSG keyworkd #2638

comment:7 Changed 7 weeks ago by ldebreu

In 14622:

AGFdomcfg: 1) define some AGRIF variables in real8 2) remove the wrong indices translation in modarrays #2638

comment:8 Changed 7 weeks ago by ldebreu

In 14623:

AGFdomcfg: 1) Update DOMAINcfg to be compliant with the removal of halo cells 2) Update most of the LBC … subroutines to a recent NEMO 4 version #2638

comment:9 Changed 7 weeks ago by ldebreu

In 14624:

AGFdomcfg: Update namelist files (jpiglo, jpjglo are replaced by NiGlo0, NjGlo0 version #2638

comment:10 Changed 7 weeks ago by ldebreu

In 14625:

AGFdomcfg: Update AGRIF_FixedGrids.in, put an updated version for the AGRIF_DEMO test #2638

comment:11 Changed 7 weeks ago by ldebreu

In 14626:

AGFdomcfg: Update make_namelist.py (Use of NiGlo0, NjGlo0 instead of jpiglo, jpjglo #2638

comment:12 Changed 7 weeks ago by jchanut

In 14628:

AGFdomcfg: Fixes a couple of tiny compilation problems #2638

comment:13 Changed 7 weeks ago by jchanut

In 14629:

AGFdomcfg: add missing block in reference namelists, #2638

comment:14 Changed 7 weeks ago by jchanut

In 14630:

AGFdomcfg: 1) restore use of analytical grids (i.e. case where jphgr_msh>0). That may be useful to set up test cases with AGRIF. 2) Add random topography over a flat bottom if nn_bathy = -1 (in place of a Gaussian bump). This illustrates well where the interface matching and update are done. #2638

comment:15 Changed 6 weeks ago by jchanut

In 14633:

AGFdomcfg: fixes internal flags in the East-West periodic case and in cmems demo, #2638

comment:16 Changed 6 weeks ago by jchanut

In 14634:

AGFdomcfg: temporary removal of lbclnk in procnames: this prevents using the tool in mpp mode, #2638

comment:17 Changed 6 weeks ago by jchanut

In 14640:

AGFdomcfg: slight changes in boundary matching location to comply with what is expected in NEMO, #2638

comment:18 Changed 6 weeks ago by jchanut

In 14641:

1) Revise boundary checking with AGRIF (unify vertical remaping case or not) 2) Disable parent volume check without vertical remaping until we sort out what to do in the damned overlapping zone. At this stage DOMAINcfg produces meshes in agreement with what NEMO expects, except for cyclic East-West child grids for which a mismatch persists at boundaries. Child grids over North Pole Fold or East-West boundaries are however correct, #2638

comment:19 Changed 6 weeks ago by jchanut

In 14655:

AGRIF: Set ghost cell number to 0 over root grid to properly define analytical grids in zooms, #2638

comment:20 Changed 6 weeks ago by jchanut

In 14656:

Revise VORTEX child grid position by taking into account Parent grid ghosts. No need to change AGRIF_FixedGrids.in file anymore if changing the number of ghostcells, #2638

comment:21 Changed 5 weeks ago by jchanut

In 14673:

Update ICE_AGRIF child domain as for VORTEX (position dependent on ghost cell number), #2638

comment:22 Changed 4 weeks ago by jchanut

In 14684:

Allow chosing type of input bathymetry in child grids again (wrongly introduced @14630), #2638

comment:23 Changed 4 weeks ago by jchanut

In 14687:

#Changes to accomodate AGRIF new grid positionning implemented at r14674 and r14675, #2638

comment:24 Changed 4 weeks ago by jchanut

In 14688:

Last round of changes following r14674, r14675 and r14687 (AGRIF new grid positionning), #2638

comment:25 Changed 4 weeks ago by jchanut

In 14698:

#2638: initialize agrif ghost cells number (to zero) on root grid (DOMAINcfg)

comment:26 Changed 4 weeks ago by jchanut

In 14702:

#2638, push restrictions in agrif mapping in case of East-West periodic or North Fold lbcs

comment:27 Changed 4 weeks ago by jchanut

In 14703:

#2638, push restrictions in agrif mapping in case of East-West periodic or North Fold lbcs + Disable interp if lk_north=.false.

comment:28 Changed 3 weeks ago by jchanut

In 14720:

#2638, use i refinement factor in place of j to define e1x over child grids

comment:29 Changed 3 weeks ago by jchanut

In 14721:

#2638, (partially) correct bathymetry transitioning in corners + add lk_north=.false. case

comment:30 Changed 10 days ago by nemo

  • Owner set to ldebreu
  • Status changed from new to assigned
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