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correct the advection for ice ponds, make a couple of cosmetic changes and fix the conservation issue for sea ice advection (just a bugged control print)

00:02 Changeset [10414] by nicolasmartin

Comment \label commands on maths environments for unreferenced equations and adapt the unnumbered math container accordingly (mainly switch to shortanded LateX syntax with \[ ... \])
Add a code trick to build subfile with its own bibliography
Fix right path for main LaTeX document in first line of subfiles (\documentclass[...]{subfiles})
Rename abstract_foreword.tex to foreword.tex
Fix some non-ASCII codes inserted here or there in LaTeX (\[0-9]*)
Made a first iteration on the indentation and alignement within math, figure and table environments to improve source code readability

2018-12-18:

18:59 Changeset [10413] by clem

merge dev_r9947_SI3_advection with the trunk. All sette tests passed. There is probably a conservation issue with the new advection scheme that I should solve but the routine icedyn_adv_umx.F90 is going to change anyway in the next couple of weeks. At worst, the old routine can be plugged without harm

18:12 Changeset [10412] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: zpshde: no more lbc_lnk in the loops, see #2133

16:57 Changeset [10411] by clem

make all the sette tests successful

16:04 Changeset [10410] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: mssing commit in test following [10380], see #2133

14:11 2019WP/ENHANCE-01_Romain_massfluxconvection(WP2018) created by clevy

14:11 Tag change on 2019WP/ENHANCE-01_Romain_massfluxconvection(WP2018) by clevy

Tags WP added

14:08 2019WP/AGRIF-01_cbricaud-EWand NorthBC(2017WP) created by clevy

14:08 Tag change on 2019WP/AGRIF-01_cbricaud-EWand NorthBC(2017WP) by clevy

Tags WP added

14:08 Ticket #2183 (AGRIF-01_cbricaud-EWandNorthBC(2017WP)) closed by clevy

invalid

14:06 Ticket #2183 (AGRIF-01_cbricaud-EWandNorthBC(2017WP)) created by clevy

BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …

13:53 Ticket #2147 (VALID-12_CLEVY_CoupledInterface) closed by clevy

fixed

12:53 Changeset [10409] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 6 add print when using non-optimal domain decomposition, see #2133

12:38 2018WP/VALID-12_CLEVY_Coupled Interface edited by frrh

(diff)

12:21 Changeset [10408] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 8 introduce sum3x3 and supress glob_sum in trcrad, see #2133

12:19 Ticket #1668 (Argument var_nodims when calling oasis3-mct_3.0 oasis_def_var routine) closed by smasson

fixed: done in the trunk, see [10404]

12:14 Ticket #2181 (return code of NEMO) closed by smasson

fixed: fixed in dev_r10164_HPC09_ESIWACE_PREP_MERGE, see [10407]

12:12 Changeset [10407] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: send back error code, see #2181

11:25 Changeset [10406] by nicolasmartin

Edition of math environments

Use LaTeX shortanted syntax for unnumbered equations (\[ ... \])
Replace deprecated eqnarray with align environment (reference http://en.wikibooks.org/w/index.php?title=LaTeX/Advanced_Mathematics&#Other_environments)
Remove some space before indices

10:48 Changeset [10405] by nicolasmartin

Add .svnignore for managing globally the skiping files and switch to latexmk to build the documentation from LaTeX

Use .svnignore to update the extensions list and apply it with svn pset -R svn:ignore -F .svnignore latex
Latexmk is a LaTeX package (https://www.ctan.org/pkg/latexmk) which takes care of the compilation process, in particular the update of the cross-references

10:05 Changeset [10404] by smasson

trunk: compatibility with oasis3-mct v4

2018-12-17:

18:06 Changeset [10403] by cmao: Add IMPLICIT NONE statements to branch following changeset 9578 for branch dev_55518_GO6_package_rigorous_compile_fix
17:07 Changeset [10402] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: no more need of lk_mpp for mpp_sum/max/min, see #2133
16:57 Changeset [10401] by cetlod: Remove obsolescence in PISCES
14:13 Changeset [10400] by antsia: the correct option for ln_rstart=F
12:25 Changeset [10399] by clem: improve ice advection (toward an acceptable solution)
09:26 2018WP/VALID-12_CLEVY_Coupled Interface edited by emalod: (diff)

2018-12-14:

17:51 Changeset [10398] by clem: BGC restart should now work in the nesting tool. All of that must of course be tested in realistic simulations. Waiting for the feedbacks…
17:27 Changeset [10397] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 5 introduce mpp_delay_sum, see #2133
16:04 Changeset [10396] by jcastill: Merge branch r6232_sst_landsea_cpl@7466
15:58 Changeset [10395] by jcastill: Merge branch r6232_hadgem3_cplfld@7463
15:34 Changeset [10394] by jcastill: Merged r6232_hadgem3_cplseq@7460 branch
15:25 Changeset [10393] by clem: ocean restart from nesting tool should now work. BGC restart must still be debugged but it is out of my expertise
15:18 Changeset [10392] by jcastill: Merge branch r6232_hadgem3_mct@7457
13:55 Changeset [10391] by dford: Delete branch as changes merged back to community branch.
13:53 Changeset [10390] by dford: Add 25-hour mean and top-middle-bottom diagnostics for all variables available through FABM, and set up indices for specific variables for easier access by OBS/ASM. See internal Met Office NEMO ticket 760.
13:48 Changeset [10389] by dford: Delete branch as changes merged back to community branch.
13:47 Changeset [10388] by dford: Updates for running with FABM-ERSEM. See internal Met Office NEMO ticket 760.
13:42 Changeset [10387] by dford: Delete commented out code.
11:55 Changeset [10386] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: safer use of l_full_nf_update (2 lines north fold exchange), see #2133
11:41 Changeset [10385] by jcastill: Copy of the AMM15_v3_6_STABLE_package_collate@10270, which will merge all the branches needed for coupling (both atmosphere and waves) - some changes are not really needed, but added anyway for consistency with well tested UKEP configurations - some of the changes are already in NEMO4.0

2018-12-12:

20:50 Ticket #2182 (zero values at the boundaties of a nested domain) created by Tj21: ==== Context I use a double nested domain configuration. After the first …
20:06 Changeset [10384] by clem: first step toward a working ocean restart in the nesting tools
19:52 Changeset [10383] by clem: ice restart should work in the nesting tools now. However ocean restart has been broken for some time
04:06 Scientific Advisory Board/Agenda/2019-01-23 edited by epico: (diff)

2018-12-11:

23:06 Changeset [10382] by cetlod: bugfix in p4zsms : initialization of t_oce_co2_flx_cum
21:00 Changeset [10381] by clem: attempt to correct several bugs in the NESTING tools. With this version, domcfg.nc file should be written correctly and the partial steps should be taken into account.
17:23 Ticket #2181 (return code of NEMO) created by mafoipsl: ==== Context To be able to detect error from the shell script launching …
11:30 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
11:02 2018WP/VALID-12_CLEVY_Coupled Interface edited by emalod: (diff)
09:27 Changeset [10380] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: iom cleaning: (1) get rid of jpnf90, jprstlib, jlibalt, iolib and (2) improve iom_getatt and iom_putatt, see #2133

2018-12-10:

15:53 Changeset [10379] by clem: bug fix affecting the lead fraction transfered from the ice model to BGC. This fraction appears not to be limited by 1 (or amax to be more precise) while it should be.
14:18 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
14:09 ATSSTSST_ts5.jpeg attached to 2018WP/VALID-12_CLEVY_Coupled Interface by clevy
14:08 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
13:15 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
13:13 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
12:56 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
12:42 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
12:36 Changeset [10378] by rrenshaw: branch for AMM7 reanalysis v5
08:45 Changeset [10377] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: merge with trunk@10376, see #2133

2018-12-09:

13:25 2019WP/ASINTER-04_Madec_waves edited by gm: (diff)
13:05 2019WP/ASINTER-04_Madec_waves edited by gm: (diff)

2018-12-07:

21:19 Changeset [10376] by aumont: sedimentation of particles in TOP module
17:50 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller: (diff)
17:50 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller: Reverted to version 1. (diff)
17:39 Ticket #2053 (ENHANCE-13_Olivier-Vertical_Sinking) closed by aumont: fixed
17:27 Changeset [10375] by aumont: Create generic routines for vertical sinking of particles
17:08 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by acc: (diff)

2018-12-06:

16:21 New topic on Jobs created by lemarief: [postdoc] Design of an improved time-stepping algorithm for the NEMO ocean model (H2020 IMMERSE)
10:50 Ticket #2180 (sette fails to compile) closed by cetlod: fixed
10:49 Changeset [10374] by cetlod: Bugfix in PISCES : rename zz2ligprod to zzligprod in p4zmicro, see ticket #2180

2018-12-05:

17:12 Ticket #2180 (sette fails to compile) created by andmirek: ==== Context For trunk@10373 some sette tests fail to compile ==== …
10:24 Changeset [10373] by emanuelaclementi: 2179: Update doc chap_SBC including wave interaction
09:50 Ticket #2179 (Update doc chap_SBC including wave interaction) created by emanuelaclementi: ==== Summary Updates on Chapter 7 User Manual to include NEMO-wave …

2018-12-04:

16:33 user/lovato/cfgrst edited by lovato: (diff)
16:19 Changeset [10372] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 8: remove communications in TOP, see #2133
16:11 user/lovato/cfgrst edited by lovato: (diff)
16:02 user/lovato edited by lovato: (diff)
15:58 Changeset [10371] by davestorkey: UKMO/dev_r10037_dynvor_EEUV branch : add option to average only sea points.
15:57 user/lovato edited by lovato: (diff)
15:56 user/lovato/cfgrst edited by lovato: (diff)
15:55 user/lovato/cfgrst edited by lovato: (diff)
15:22 user/lovato/cfgrst edited by lovato: (diff)
15:13 2019WP edited by acc: (diff)
15:12 user/lovato/cfgrst edited by lovato: (diff)
15:09 2019WP edited by acc: (diff)
14:59 user/lovato/cfgrst edited by lovato: (diff)
14:29 Developers/Validation/trunk edited by nemo: (diff)
14:22 Ticket #2178 (Wrong index used in shear calculation?) created by jamesharle: ==== Context Wrong vertical index of e3w_n used calculating zdku and …
14:02 2019WP/ENHANCE-07_JamesH-sigma_under_ISF created by acc
14:02 Tag change on 2019WP/ENHANCE-07_JamesH-sigma_under_ISF by acc: Tags WP added
14:02 Ticket #2177 (Deriving scale factors if ln_isfcav = true) created by jamesharle: ==== Context When employing ln_isfcav = true and generating a …
13:58 Ticket #2176 (ENHANCE-07_JamesH-sigma_under_ISF) created by acc: ==== Summary ||=Action || ${ACTION_NAME} Subject …
13:30 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis created by acc
13:30 Tag change on 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis by acc: Tags WP added
13:28 Ticket #2175 (ENHANCE-05_SimonM-Harmonic_Analysis) created by acc: ==== Summary ||=Action || ENHANCE-05_SimonM-Harmonic_Analysis …
12:39 Developers/Validation/trunk edited by nemo: (diff)
12:01 user/lovato/cfgrst edited by lovato: (diff)
11:37 Changeset [10370] by smasson: trunk: get 03 optimisation working with AGRIF in angle
11:31 user/lovato/cfgrst edited by lovato: (diff)
00:28 user/lovato/cfgrst edited by lovato: (diff)
00:27 user/lovato/cfgrst edited by lovato: (diff)
00:07 user/lovato/cfgrst edited by lovato: (diff)

2018-12-03:

23:52 user/lovato/cfgrst edited by lovato: (diff)
23:28 user/lovato/cfgrst edited by lovato: (diff)
22:55 user/lovato/cfgrst edited by lovato: (diff)
22:10 user/lovato/cfgrst edited by lovato: (diff)
18:38 user/lovato/cfgrst edited by lovato: (diff)
18:15 user/lovato/cfgrst created by lovato
18:13 user/lovato created by lovato
15:28 Changeset [10369] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: missing modifications in test/*/MY_SRC/domvvl.F90, see #2133
12:45 Changeset [10368] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: merge with trunk@10365, see #2133
12:35 Changeset [10367] by cetlod: bugfix : frees space previously allocated in PISCES
12:26 Changeset [10366] by dford: Remove visibility, as now available through FABM, and switch from deprecated get_bulk to get_interior.
11:31 Ticket #2174 (Update iceload calculation in dyn_hpg_init) created by jamesharle: ==== Context In dyn_hpg_init the iceload calculation uses gdept_1d. For …
10:25 New topic on Beginner created by trackstand: [inputs] AMM12 files moved?

2018-12-01:

12:33 Changeset [10365] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: merge with dev_r9866_HPC_03_globcom, see #2133

2018-11-30:

18:42 Changeset [10364] by acc: Introduce Adaptive-Implicit vertical advection option to the trunk. This is code merged from branches/2018/dev_r9956_ENHANCE05_ZAD_AIMP (see ticket #2042). The structure for the option is complete but is currently only successful with the flux-limited advection scheme (ln_traadv_mus). The use of this scheme with flux corrected advection schemes is not recommended until improvements to the nonoscillatory algorithm have been completed (work in progress elsewhere). The scheme is activated via a new namelist switch (ln_zad_Aimp) and is off by default.
16:39 Changeset [10363] by aumont: Various bug fixes and improvements
16:38 Changeset [10362] by aumont: Various bug fixes and improvements
15:49 Working Groups/HPC/Mins_MP_2018_11_23 edited by mcastril: (diff)
15:37 Working Groups/HPC edited by mcastril: (diff)
15:36 Working Groups/HPC/Mins_MP_2018_11_23 edited by mcastril: (diff)
15:33 Working Groups/HPC edited by mcastril: (diff)
15:31 Working Groups/HPC/Mins_MP_2018_11_23 created by mcastril
15:31 Tag change on Working Groups/HPC/Mins_MP_2018_11_23 by mcastril: Tags VC added
13:01 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
12:48 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
12:27 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: s (diff)
12:13 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
11:56 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
09:34 Ticket #2163 (depth[tuvw]_bounds initialised to wrong values in iom_init) closed by davestorkey: fixed: Bug fix doesn't change SETTE results and sanity checked by Daley Calvert. …
09:33 Changeset [10361] by davestorkey: Bug fix for depth_bounds initialisation in iom_init. Ticket #2163.
08:31 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
08:26 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
08:25 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)

2018-11-29:

18:15 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
18:11 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
18:08 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
18:07 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
18:06 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
17:18 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
12:33 2019WP edited by mathiot: (diff)
12:00 Ticket #1928 (Missing bits of code in triads) reopened by mathiot: In your fix about zdzrho_raw, you changed 2 things: - The undefined …
10:41 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
10:20 2019WP edited by diovino: (diff)
10:19 2019WP edited by diovino: (diff)

2018-11-26:

21:18 Page Templates/ST_Meeting edited by nemo: (diff)

2018-11-25:

22:47 Changeset [10360] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: key_nosignedzero not related to configurations but to the arch files, see #2133
22:33 Changeset [10359] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 4c: introduce a better version of the non-blocking mpp_max, see #2133
15:24 Changeset [10358] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 5b: by default, suppress global communication in stpctl, see #2133