Context Navigation

Timeline

2019-01-02:

10:38 Changeset [10449] by andmirek: GMED ticket 425 changes for INTEL compiler

2018-12-31:

06:48 New reply on Skilled created by puneet336: [land-proc] ORCA2_LIM setup fails while removing - land only grid cells

2018-12-21:

17:43 Changeset [10448] by nicolasmartin

Add case sensitive check for namelists parameters
We should clearly avoid using uppercase as it can only bring us further issues:

Uppercase does not provide any essential information
Fortran is case insensitive by default and convert all uppercase to lowercase
It generates collateral damage by adding more complexity, for instance when defining correct regular expression to match

17:20 Changeset [10447] by hadjt

Updated DIA/diadct code for the volume transport across cross sections, and bugfix for region mean code
#766: Created /branches/dev/hadjt/r8666_NEMO_CO6_shelfclimate_fabm_noos from /trunk@8666.

16:07 Changeset [10446] by clem

clean the routine icedyn_adv_umx

15:55 Changeset [10445] by nicolasmartin

Update the content of namelists folder with last revision of namelist*_ref
Add also PISCES and TRC specific namelists

15:41 Changeset [10444] by nicolasmartin

Add script to check basic changes in namelist between 2 releases (actually here 3.6 and 4.0)

15:36 Changeset [10443] by nicolasmartin

Improve bash script to check the validity of the references included in the manual wrt to NEMO source code
manuals_checking.sh will report

missing namelists
vanished references (\mdl, \ngn, \nlst, \rou and \np)
namelist parameters not following the current conventions: ^[cdlnr]n_*

15:18 Changeset [10442] by nicolasmartin

Front page edition, cleaning in custom LaTeX commands and add index for single subfile compilation

Use \thanks storing cmd to refer to the ST members list for 2018 in an footnote on the cover page
NEMO and Fortran in small capitals
Removing of unused or underused custom cmds, move local cmds to their respective .tex file
Addition of new ones (\zstar, \ztilde, \sstar, \stilde, \ie, \eg, \fortran, \fninety)
Fonts for indexed items: italic font for files (modules and .nc files), preformat for code (CPP keys, routines names and namelists content)

14:10 Changeset [10441] by frrh

Reinstate ln_trdtrc(2).

12:38 Changeset [10440] by smasson

trunk: get back ORCA2 AGRIF vs ORCA2 NOAGRIF working

12:18 Changeset [10439] by clem

debug zalesak prelimiter in ice advection

11:30 Changeset [10438] by frrh

Remove dangerouus preset values in top ref namelist
.

11:18 Changeset [10437] by smasson

trunk: improve communication_report.txt for delayed global comm

10:49 2019WP edited by clevy

(diff)

10:45 Ticket #2037 (ROBUST-05_clevy_shaconemo_future) closed by clevy

fixed

09:21 Changeset [10436] by smasson

trunk: bugfix in land-processor detection and minor cleanning

2018-12-20:

17:20 2019WP/AGRIF-01_jchanut_small_jpi_jpj created by smasson
17:20 Tag change on 2019WP/AGRIF-01_jchanut_small_jpi_jpj by smasson: Tags WP added
17:19 2019WP/HPC-01_Mike Bell_OpenMP edited by mathiot: (diff)
17:18 Ticket #2199 (AGRIF-01_jchanut_small_jpi_jpj) created by smasson: ==== Summary ||=Action || AGRIF-01_jchanut_small_jpi_jpj || …
17:17 2019WP/HPC-10_Mike_Tiling edited by mathiot: (diff)
17:16 Ticket #2198 (HPC-10_Mike_Tiling) created by mathiot: BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …
17:13 2019WP/HPC-10_Mike_Tiling created by mathiot
17:13 Tag change on 2019WP/HPC-10_Mike_Tiling by mathiot: Tags WP2019 added
17:02 2019WP/HPC-09_Mireck_OpenACC edited by mathiot: (diff)
17:01 Ticket #2197 (HPC-09_Mireck_OpenACC) created by mathiot: BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …
17:01 2019WP/HPC-08_Mirek Andrejczuk_fldread_with_XIOS edited by smasson: (diff)
17:00 2019WP/HPC-07_Epicoco_AGRIF_Load Balancing edited by smasson: (diff)
16:59 2019WP/HPC-09_Mireck_OpenACC edited by mathiot: (diff)
16:59 Tag change on 2019WP/HPC-09_Mireck_OpenACC by mathiot: Tags WP2019 added; WP removed
16:55 2019WP/HPC-09_Mireck_OpenACC created by mathiot
16:55 Tag change on 2019WP/HPC-09_Mireck_OpenACC by mathiot: Tags WP added
16:48 2019WP/HPC-07_Epicoco_AGRIF_Load Balancing created by smasson
16:48 Tag change on 2019WP/HPC-07_Epicoco_AGRIF_Load Balancing by smasson: Tags WP added
16:47 Ticket #2196 (HPC-07_XXX_agrif_HPC_review) created by smasson: ==== Summary ||=Action || NEMO-AGRIF HPC performances …
16:29 2019WP/HPC-08_Mirek Andrejczuk_fldread_with_XIOS created by smasson
16:29 Tag change on 2019WP/HPC-08_Mirek Andrejczuk_fldread_with_XIOS by smasson: Tags HPC, WP2019 added
16:24 Changeset [10435] by acc: Update NOC sette batch file for MOBILIS to use a more modern version of OpenMPI
16:23 Ticket #2195 (HPC-08_XXX_fldread_with_XIOS) created by smasson: ==== Summary ||=Action || Fldread with XIOS …
16:10 2019WP edited by smasson: (diff)
16:04 2019WP/ENHANCE-12_SimonM-Tides edited by smueller: (diff)
15:12 Changeset [10434] by frrh: Remove invalid default settings from namelist_top_ref
14:19 2019WP/ENHANCE-02_Pierre Mathiot_ISF edited by mathiot: (diff)
13:20 2019WP/ENHANCE-12_SimonM-Tides created by smueller
13:20 Tag change on 2019WP/ENHANCE-12_SimonM-Tides by smueller: Tags WP added
13:12 Ticket #2194 (ENHANCE-12_SimonM-Tides) created by smueller: ==== Summary ||=Action || ENHANCE-12_SimonM-Tides …
11:25 Changeset [10433] by smasson: sette: add missing ln_ctl = .true.
10:24 Ticket #1943 (HPC-02(2017WP)_Francesca Development of the NEMO hybrid parallel version ...) closed by francesca: fixed
10:17 Ticket #2193 (CMCC-03_Clementi_Add Wave Diag) created by emanuelaclementi: ==== Abstract In order to improve the actual NEMO-WAVE coupling, CMCC …
09:54 Changeset [10432] by clem: debug namelist ICEDYN
09:50 Changeset [10431] by clem: debug namelists in ICEADV
09:50 Changeset [10430] by smasson: sette: clean ICEDYN in sette_test-cases.sh
09:33 Ticket #2010 (HPC-03_Mocavero_globcomm) closed by francesca: fixed
09:32 Changeset [10429] by smasson: sette: remove jpnij in sette.sh and sette_test-cases.sh
09:14 2019WP/PUBS-03_NDS_CHAPTER created by vancop
09:14 Tag change on 2019WP/PUBS-03_NDS_CHAPTER by vancop: Tags WP added
09:13 2019WP/SI3-09_TEOS10_phase_diagram created by vancop
09:13 Tag change on 2019WP/SI3-09_TEOS10_phase_diagram by vancop: Tags WP added
09:12 Changeset [10428] by smasson: trunk: suppress jpnij from the namelist (already defined by mppsize)
09:12 2019WP/PUBS-05_SI3_documentation created by vancop
09:12 Tag change on 2019WP/PUBS-05_SI3_documentation by vancop: Tags WP added
09:11 2019WP/SI3-07_tsamados_drags created by vancop
09:11 Tag change on 2019WP/SI3-07_tsamados_drags by vancop: Tags WP added
09:02 2019WP/SI3-08_lagrangian_drifters edited by vancop: (diff)
09:01 Ticket #2192 (SI3-09_TEOS10_phase_diagram) created by vancop: Publish the TEOS-10 phase diagram for sea ice ==== Summary ||=Action …
08:59 Ticket #2191 (PUB-03_NDS_CHAPTER) created by vancop: BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …
08:58 Ticket #2190 (SI3-09_TEOS_PHASE_DIAGRAM) created by vancop: Publish the future possible TEOS10_phase diagram. ==== Summary …
08:57 Ticket #2189 (PUB-05_SI3_documentation) created by vancop: SI3 documentation must be continued and reviewed ==== Summary …
08:56 Ticket #2188 (SI3-07_tsamados_drags) created by vancop: 'Implement ice-atmosphere tsamados drags ==== Summary ||=Action …
08:55 2019WP/SI3-08_lagrangian_drifters created by vancop
08:55 Tag change on 2019WP/SI3-08_lagrangian_drifters by vancop: Tags WP added
08:54 2019WP/SI3-05_VP_rheology created by vancop
08:54 Tag change on 2019WP/SI3-05_VP_rheology by vancop: Tags WP added
08:52 Ticket #2187 (SI3-04_lagrangian_drifters) created by vancop: Implement lagrangian drifters in sea ice for immerse ==== Summary …
08:50 Ticket #2186 (SI3-03_VP_rheology) created by vancop: BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …

2018-12-19:

23:06 Changeset [10427] by smasson

sette: add ln_ctl = .true.

23:01 Changeset [10426] by smasson

sette: add ln_ctl = .true.

22:54 Changeset [10425] by smasson

trunk: merge back dev_r10164_HPC09_ESIWACE_PREP_MERGE@10424 into the trunk

22:51 Changeset [10424] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: to allow merge toward the trunk, see #2133

22:39 Changeset [10423] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: switch off optimisation introduced in [10175], see #2133

22:34 Changeset [10422] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: improve mppini messages, see #2133

22:32 Changeset [10421] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: missing commit following [10420], see #2133

21:04 Changeset [10420] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: force STOP when fail to allocate array, see #2133

20:46 Changeset [10419] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: merge with trunk@10418, see #2133

20:43 2018WP/ENHANCE-10_Nicolas-Trusting Sette Cooperation created by nicolasmartin

[wiki:"2019WP/ENHANCE-11_Nicolas-TrustingSetteCooperation@2" …

20:42 2018WP/ENHANCE-11_Nicolas-Repository Cleaning created by nicolasmartin

[wiki:"2019WP/ENHANCE-06_Nicolas-RepositoryCleaning@2" …

19:37 Ticket #2056 (PUBLI-02_nicolas_Project_Bibliography) closed by nicolasmartin

worksforme

18:07 Ticket #2020 (ENHANCE-12_Yevgeny-Icewaves) closed by acc

wontfix

18:04 Ticket #2030 (VALID-06_storkey_global validation of proto-NEMO 4.0 release in ORCA1, ...) closed by mathiot

fixed: Dave have completed 30-year CORE2-forced integrations for ORCA1 and …

18:02 Ticket #2042 (ENHANCE-05_Gurvan-Vertical_Advection) closed by acc

fixed

17:12 2019WP/VALID-04_CEthe_TOP_OFF created by cetlod

17:12 Tag change on 2019WP/VALID-04_CEthe_TOP_OFF by cetlod

Tags WP added

17:10 2019WP/ENHANCE-11_CEthe_Shaconemo_diags created by cetlod

17:10 Tag change on 2019WP/ENHANCE-11_CEthe_Shaconemo_diags by cetlod

Tags WP added

17:06 2019WP/TOP-01_CEthe_PISCES_LBC created by cetlod

17:06 Tag change on 2019WP/TOP-01_CEthe_PISCES_LBC by cetlod

Tags WP added

16:25 Tag change on System Team/Agenda/2018-12-20 by acc

Tags VC added

16:11 2019WP/ENHANCE-05_SimonM-Harmonic_Analysis edited by smueller

(diff)

15:24 Ticket #2185 (VP_rheology) created by vancop

BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …

15:18 Changeset [10418] by clem

cosmetic changes

15:14 Changeset [10417] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: suppress the use of nstop out of ctl_stop, see #2133

14:29 Ticket #2184 (VP_rheology) created by vancop

VP rheology fo immerse ==== Summary ||=Action || …

12:45 Changeset [10416] by aumont

Remove LFe from standard PISCES code

12:41 2019WP/AGRIF-02_CMEMS_improve_global created by clevy

12:41 Tag change on 2019WP/AGRIF-02_CMEMS_improve_global by clevy

Tags WP added

12:37 2019WP/SI3-04_crousset_evaluation_UM5vsPRATHER created by clevy

12:37 Tag change on 2019WP/SI3-04_crousset_evaluation_UM5vsPRATHER by clevy

Tags WP added

12:35 2019WP/SI3-03_crousset_validation_landfast created by clevy

12:35 Tag change on 2019WP/SI3-03_crousset_validation_landfast by clevy

Tags WP added

12:33 2019WP/SI3-02_crousset_validation_rheology created by clevy

12:33 Tag change on 2019WP/SI3-02_crousset_validation_rheology by clevy

Tags WP added

12:28 Changeset [10415] by clem

correct the advection for ice ponds, make a couple of cosmetic changes and fix the conservation issue for sea ice advection (just a bugged control print)

00:02 Changeset [10414] by nicolasmartin

Comment \label commands on maths environments for unreferenced equations and adapt the unnumbered math container accordingly (mainly switch to shortanded LateX syntax with \[ ... \])
Add a code trick to build subfile with its own bibliography
Fix right path for main LaTeX document in first line of subfiles (\documentclass[...]{subfiles})
Rename abstract_foreword.tex to foreword.tex
Fix some non-ASCII codes inserted here or there in LaTeX (\[0-9]*)
Made a first iteration on the indentation and alignement within math, figure and table environments to improve source code readability

2018-12-18:

18:59 Changeset [10413] by clem

merge dev_r9947_SI3_advection with the trunk. All sette tests passed. There is probably a conservation issue with the new advection scheme that I should solve but the routine icedyn_adv_umx.F90 is going to change anyway in the next couple of weeks. At worst, the old routine can be plugged without harm

18:12 Changeset [10412] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: zpshde: no more lbc_lnk in the loops, see #2133

16:57 Changeset [10411] by clem

make all the sette tests successful

16:04 Changeset [10410] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: mssing commit in test following [10380], see #2133

14:11 2019WP/ENHANCE-01_Romain_massfluxconvection(WP2018) created by clevy

14:11 Tag change on 2019WP/ENHANCE-01_Romain_massfluxconvection(WP2018) by clevy

Tags WP added

14:08 2019WP/AGRIF-01_cbricaud-EWand NorthBC(2017WP) created by clevy

14:08 Tag change on 2019WP/AGRIF-01_cbricaud-EWand NorthBC(2017WP) by clevy

Tags WP added

14:08 Ticket #2183 (AGRIF-01_cbricaud-EWandNorthBC(2017WP)) closed by clevy

invalid

14:06 Ticket #2183 (AGRIF-01_cbricaud-EWandNorthBC(2017WP)) created by clevy

BE CAREFUL !!! Due to dynamic behaviour of this ticket creation page, it …

13:53 Ticket #2147 (VALID-12_CLEVY_CoupledInterface) closed by clevy

fixed

12:53 Changeset [10409] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 6 add print when using non-optimal domain decomposition, see #2133

12:38 2018WP/VALID-12_CLEVY_Coupled Interface edited by frrh

(diff)

12:21 Changeset [10408] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 8 introduce sum3x3 and supress glob_sum in trcrad, see #2133

12:19 Ticket #1668 (Argument var_nodims when calling oasis3-mct_3.0 oasis_def_var routine) closed by smasson

fixed: done in the trunk, see [10404]

12:14 Ticket #2181 (return code of NEMO) closed by smasson

fixed: fixed in dev_r10164_HPC09_ESIWACE_PREP_MERGE, see [10407]

12:12 Changeset [10407] by smasson

dev_r10164_HPC09_ESIWACE_PREP_MERGE: send back error code, see #2181

11:25 Changeset [10406] by nicolasmartin

Edition of math environments

Use LaTeX shortanted syntax for unnumbered equations (\[ ... \])
Replace deprecated eqnarray with align environment (reference http://en.wikibooks.org/w/index.php?title=LaTeX/Advanced_Mathematics&#Other_environments)
Remove some space before indices

10:48 Changeset [10405] by nicolasmartin

Add .svnignore for managing globally the skiping files and switch to latexmk to build the documentation from LaTeX

Use .svnignore to update the extensions list and apply it with svn pset -R svn:ignore -F .svnignore latex
Latexmk is a LaTeX package (https://www.ctan.org/pkg/latexmk) which takes care of the compilation process, in particular the update of the cross-references

10:05 Changeset [10404] by smasson

trunk: compatibility with oasis3-mct v4

2018-12-17:

18:06 Changeset [10403] by cmao: Add IMPLICIT NONE statements to branch following changeset 9578 for branch dev_55518_GO6_package_rigorous_compile_fix
17:07 Changeset [10402] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: no more need of lk_mpp for mpp_sum/max/min, see #2133
16:57 Changeset [10401] by cetlod: Remove obsolescence in PISCES
14:13 Changeset [10400] by antsia: the correct option for ln_rstart=F
12:25 Changeset [10399] by clem: improve ice advection (toward an acceptable solution)
09:26 2018WP/VALID-12_CLEVY_Coupled Interface edited by emalod: (diff)

2018-12-14:

17:51 Changeset [10398] by clem: BGC restart should now work in the nesting tool. All of that must of course be tested in realistic simulations. Waiting for the feedbacks…
17:27 Changeset [10397] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: action 5 introduce mpp_delay_sum, see #2133
16:04 Changeset [10396] by jcastill: Merge branch r6232_sst_landsea_cpl@7466
15:58 Changeset [10395] by jcastill: Merge branch r6232_hadgem3_cplfld@7463
15:34 Changeset [10394] by jcastill: Merged r6232_hadgem3_cplseq@7460 branch
15:25 Changeset [10393] by clem: ocean restart from nesting tool should now work. BGC restart must still be debugged but it is out of my expertise
15:18 Changeset [10392] by jcastill: Merge branch r6232_hadgem3_mct@7457
13:55 Changeset [10391] by dford: Delete branch as changes merged back to community branch.
13:53 Changeset [10390] by dford: Add 25-hour mean and top-middle-bottom diagnostics for all variables available through FABM, and set up indices for specific variables for easier access by OBS/ASM. See internal Met Office NEMO ticket 760.
13:48 Changeset [10389] by dford: Delete branch as changes merged back to community branch.
13:47 Changeset [10388] by dford: Updates for running with FABM-ERSEM. See internal Met Office NEMO ticket 760.
13:42 Changeset [10387] by dford: Delete commented out code.
11:55 Changeset [10386] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: safer use of l_full_nf_update (2 lines north fold exchange), see #2133
11:41 Changeset [10385] by jcastill: Copy of the AMM15_v3_6_STABLE_package_collate@10270, which will merge all the branches needed for coupling (both atmosphere and waves) - some changes are not really needed, but added anyway for consistency with well tested UKEP configurations - some of the changes are already in NEMO4.0

2018-12-12:

20:50 Ticket #2182 (zero values at the boundaties of a nested domain) created by Tj21: ==== Context I use a double nested domain configuration. After the first …
20:06 Changeset [10384] by clem: first step toward a working ocean restart in the nesting tools
19:52 Changeset [10383] by clem: ice restart should work in the nesting tools now. However ocean restart has been broken for some time
04:06 Scientific Advisory Board/Agenda/2019-01-23 edited by epico: (diff)

2018-12-11:

23:06 Changeset [10382] by cetlod: bugfix in p4zsms : initialization of t_oce_co2_flx_cum
21:00 Changeset [10381] by clem: attempt to correct several bugs in the NESTING tools. With this version, domcfg.nc file should be written correctly and the partial steps should be taken into account.
17:23 Ticket #2181 (return code of NEMO) created by mafoipsl: ==== Context To be able to detect error from the shell script launching …
11:30 2018WP/VALID-12_CLEVY_Coupled Interface edited by clevy: (diff)
11:02 2018WP/VALID-12_CLEVY_Coupled Interface edited by emalod: (diff)
09:27 Changeset [10380] by smasson: dev_r10164_HPC09_ESIWACE_PREP_MERGE: iom cleaning: (1) get rid of jpnf90, jprstlib, jlibalt, iolib and (2) improve iom_getatt and iom_putatt, see #2133