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2020-09-30:

16:14 Developers/Validation/trunk_light edited by smasson
(diff)
11:57 Changeset [13547] by clem

remove unused argument in a subroutine

10:50 Ticket #2535 (pass sette tests in DEBUG mode...) closed by smasson
fixed: this version pass all sette tests with X64_JEANZAY_DEBUG with option …
10:47 Changeset [13546] by smasson

trunk: supress the use of undefined values, see #2535

09:57 Ticket #2535 (pass sette tests in DEBUG mode...) created by smasson
==== Context pass sette tests in debug mode and suppress use of undefined …
09:46 Changeset [13545] by smasson

arch: update debug arch files

09:41 Ticket #2519 (User defined straight open boundary segments and halo size does not work) closed by smasson
fixed
09:41 Ticket #2519 (User defined straight open boundary segments and halo size does not work) reopened by smasson
09:41 Ticket #2519 (User defined straight open boundary segments and halo size does not work) closed by smasson
fixed
09:03 Changeset [13544] by vancop

now VP rheology compiles

2020-09-29:

17:51 Tag change on System Team/Agenda/2020-10-01 by smasson
Tags VC added
16:14 Changeset [13543] by rlod

Creation of a new branch for Nutrient Source from Antarctic Ice Sheet in TOP

15:36 Changeset [13542] by andmirek

Ticket #2386: additional fixes for trunk changes

14:07 Changeset [13541] by smasson

trunk: better version of bdyini than in [13537], see #2519

12:56 Ticket #2472 (bug in the drags (with ln_wave and ln_Cd_L15)) closed by clem
fixed
12:41 Changeset [13540] by andmirek

Ticket #2386: update to latest trunk

12:40 Changeset [13539] by hadcv

#2365: Use assumed-shape declarations in wrapped functions

12:23 Ticket #2528 (mixed up ctl files with SAS in coupled mode) closed by gsamson
fixed
12:21 Changeset [13538] by gsamson

change control print filenames when using SAS+OASIS and add optional input filename argument in timing_init routine; ticket #2528

12:18 Ticket #2384 (ORCA2_OFF_PISCES sette test) closed by andmirek
wontfix: ORCA2_OFF_PISCES not in sette any more.
12:09 Changeset [13537] by smasson

trunk: bugfix for BDY defined with segments, see #2519

11:30 Ticket #2523 (phasing 4.0 - trunk) closed by smasson
fixed
11:22 Changeset [13536] by vancop

VP rheology, first code version finalised

2020-09-28:

16:32 Changeset [13535] by hadcv

#2365: Delete unused branch

16:32 Changeset [13534] by hadcv

#2365: Delete unused branch

16:31 Changeset [13533] by hadcv

#2365: Delete unused branch

16:14 Ticket #2534 (Extra halo rows in GYRE) created by hadcv
GYRE includes hard-coded halo rows, see …
15:53 Ticket #2533 (avt_evd is undefined when enhanced vertical diffusion is not used) created by hadcv
avt_evd is undefined when ln_zdfevd == .FALSE., causing uninitialised …
15:38 Ticket #2532 (Several bugs in diaptr) created by hadcv
1. timing_stop is not called if l_diaptr == .FALSE. 2. The "zosrf" …
15:29 Changeset [13532] by clem

remove annoying prints coming from bbl

15:15 Ticket #2531 (Incorrect character length declaration in diaobs) created by hadcv
The dummy (cobstypes) and actual (cobstypesprof, cobstypessurf) …
14:59 Ticket #2530 (Missing/duplicate diagnostics in ldf_eiv_dia) created by hadcv
The V component of the heat and salt transports due to EIV are not …
14:45 Changeset [13531] by timgraham

Change to mppstop to prevent the model hanging when an error occurs.

14:38 Ticket #2529 (Incorrect length for IOM "ptr" zoom domain) created by hadcv
When using the "ptr" domain for diaptr output, only the first jpj rows …
11:16 Changeset [13530] by clem

remove duplicated lines

10:34 Changeset [13529] by smasson

arch: add -init=arrays,snan to intel DEBUG options

09:49 Ticket #2528 (mixed up ctl files with SAS in coupled mode) created by gsamson
[…] ==== Context When using SAS with OASIS, both SAS and OCE …

2020-09-25:

18:01 Changeset [13528] by gsamson

add the possibility to store MY_SRC files into subdirectories (for exemple: MY_SRC/ticket#XXXX/*.F90 and MY_SRC/ticket#YYYY/*.F90) by using 'find' instead of 'ls' to search files in MY_SRC

18:00 Changeset [13527] by smasson

trunk: missing parts of [13526] + soem cleaning

15:03 Changeset [13526] by smasson

trunk: minor bugfix to run with strong debugging options

14:45 Changeset [13525] by rlod

updating namelist_top according to nutrient sources from Antarctic Ice Sheet

14:30 Changeset [13524] by rlod

First step of nutrient sources from Antarctic Ice Sheet

13:25 Changeset [13523] by francesca

Create HPC-09 branch - ticket #2367

11:01 Changeset [13522] by vancop

Close to compiling VP

08:56 Developers/Validation/r4.0_light edited by smasson
(diff)

2020-09-24:

21:55 2020WP/HPC-02_Daley_Tiling edited by hadcv
(diff)
21:48 Tiling_progress_summary_240920.pdf attached to 2020WP/HPC-02_Daley_Tiling by hadcv
September 2020 progress summary
20:52 Changeset [13521] by hadcv

Add top level tiling loop

20:51 Changeset [13520] by hadcv

Tiling for timing

20:51 Changeset [13519] by hadcv

Tiling for DIA routines called by TRA modules

20:49 Changeset [13518] by hadcv

Tiling for modules before tra_adv

20:42 Changeset [13517] by hadcv

Tiling for modules after tra_ldf

20:38 Changeset [13516] by hadcv

Tiling for tra_adv

20:32 Changeset [13515] by hadcv

Tiling for tra_ldf

20:29 Changeset [13514] by hadcv

Tiling variables, functions and namelist

20:27 timing_results.pdf attached to 2020WP/HPC-02_Daley_Tiling by hadcv
Tiling performance results (Sept 2020)
20:24 Tiling_code_issues.pdf attached to 2020WP/HPC-02_Daley_Tiling by hadcv
Description of tiling issues
20:06 2020WP/HPC-02_Daley_Tiling edited by hadcv
(diff)
14:33 Developers/Validation/trunk_light edited by smasson
(diff)
14:26 Developers/Validation/r4.0_light edited by smasson
(diff)
14:17 Changeset [13513] by techene

#2527 and #2385 add a symmetric operator for ocean viscosity

13:57 Changeset [13512] by techene

#2385 add the possibility of having F grid files / variables (needed for SWE and maybe useful for having the vorticity at the right point)

13:37 New topic on News created by cetlod
XIOS
10:55 Changeset [13511] by smasson

r4.0-HEAD: avoid unnecessary division by 0 in gls, correspond to [13506]

09:45 Changeset [13510] by smasson

arch: update intel debug options for IRENE and JEANZAY

09:24 Changeset [13509] by smasson

delete temporary sette version: r12931_sette_ticket2366

09:21 Changeset [13508] by smasson

trunk: update svn:externals for sette@13507

09:15 Changeset [13507] by smasson

sette: add missing in ORCA2_ICE_OBS and AGRIF_DEMO_NOAGRIF

09:12 Changeset [13506] by smasson

trunk: avoid unnecessary division by 0 in gls

2020-09-23:

16:12 2020WP/KERNEL-06_techene_better_e3_management edited by techene
(diff)
16:10 Ticket #2527 (Add a symmetric operator for ocean viscosity) created by techene
==== Workplan action In addition to the standard anti-symmetric operator …
11:43 Changeset [13505] by dford

Get kd490 from spectral optical model.

11:41 Changeset [13504] by dford

Update for getting kd490 from spectral optical model.

2020-09-22:

22:12 Changeset [13503] by techene

files copied from dev_r12527_Gurvan_ShallowWater see #2385

22:07 Changeset [13502] by techene

test for SWE developpement integrated into KERNEL-06_2 see #2385

18:43 Changeset [13501] by gsamson

define default value (=0.) for sbc ABL hpgi and hpgj fields when 'not used'

15:36 Changeset [13500] by davestorkey

branches/UKMO/NEMO_4.0.1_momentum_trends : bug fix for vtrd_zdf term.

12:56 Developers/Validation/trunk_light edited by smasson
(diff)

2020-09-21:

20:59 Developers/Validation/trunk_light edited by acc
(diff)
17:24 Changeset [13499] by dford

Update qsr3d diagnostic for spectral case.

15:56 Changeset [13498] by jchanut

#2222 1) Define agrif sponge at f-points 2) Correct bathymetry check with vertical refinement just over needed points

14:45 Ticket #2525 (missing comments in do loops) closed by techene
fixed
14:37 Changeset [13497] by techene

re-introduce comments that have been erased by loops transformation see #2525

12:33 Changeset [13496] by dford

Two-way NEMO-ERSEM coupling via chlorophyll field.

10:26 Changeset [13495] by clem

trunk: avoid one unecessary calculation, almost cosmetics

10:26 Changeset [13494] by clem

4.0-HEAD: avoid one unecessary calculation, almost cosmetics

09:00 Changeset [13493] by vancop

Some progress on VP rheology but still does not compile

2020-09-18:

17:27 Changeset [13492] by smasson

r4.0-HEAD: avoid to use undefined values in GLS. pass all sette etsts in debug mode

15:54 Ticket #2526 (bestpartition in mppini no more working) closed by smasson
fixed
15:11 Developers/Validation/trunk_light edited by smasson
(diff)
09:04 Changeset [13491] by smasson

trunk: minor bugfix in sbcflx following 13485

08:48 Changeset [13490] by smasson

trunk: fix bestpartition in mppini, see #2526

08:31 NEMO_Developers_Committee_slides_MJB_Sep_2020.pdf attached to Developers Committee/Agenda/2020-09-14 by mikebell
Mike's slides on SAC and NDS
08:28 NEMO_DevComm_Minutes_20200914.pdf attached to Developers Committee/Agenda/2020-09-14 by mikebell
Minutes of NDC meeting 14 Sep 2020

2020-09-17:

19:13 Changeset [13489] by dford

Merge in previous branch.

19:11 Changeset [13488] by dford

New branch for updates for FABM v1 and two-way coupling.

19:09 Changeset [13487] by dford

Merge in previous branch.

19:02 Changeset [13486] by dford

New branch for updates for FABM v1.

15:23 Ticket #2526 (bestpartition in mppini no more working) created by smasson
==== Context Since [13286] and [13291] bestpartition is no more finding …
14:59 Ticket #2237 (no/partial/strong slip condition is actually free slip in one-point ...) closed by clem
fixed: fixed also in the trunk from r13472
14:58 Ticket #2435 (Initialisation top/bottom 'en' value in zdftke) closed by clem
fixed: fixed in both trunk (from r13472) and r4.0-HEAD
14:49 Ticket #2476 (Missing mixing length parameterization under sea-ice) closed by clem
fixed
14:49 Ticket #2522 (sbcflx defects) closed by clem
fixed: fixed at r13484 (4.0) and r13485 (trunk). Namelist has not changed, so …
14:45 Changeset [13485] by clem

trunk: fix ticket #2522

14:45 Changeset [13484] by clem

4.0-HEAD: fix ticket #2522

10:24 Changeset [13483] by smasson

trunk: avoid to use undefined values in sbcdcy when nn_hls > 1, following [13460]

2020-09-16:

22:14 Developers/Validation/trunk_light edited by smasson
(diff)
21:38 Developers/Validation/trunk_light edited by smasson
(diff)
21:23 Developers/Validation/trunk_light edited by smasson
(diff)
21:17 Developers/Validation/r4.0_light edited by smasson
(diff)
21:09 Changeset [13482] by smasson

trunk: fix WED025 nameliste_ice_cfg

19:14 Changeset [13481] by clem

r4.0-HEAD: backward compatibility following commit r13477 from the trunk

19:03 Changeset [13480] by clem

fix compilation issue in BENCH

18:56 Changeset [13479] by clem

4.0-HEAD: update agrif routines so that it takes into account the pond lids (forgotten initially)

18:37 Changeset [13478] by dancopsey

Undo last change.

17:26 Ticket #2525 (missing comments in do loops) created by smasson
==== Context comments following DO loops on ji, jj, or jk have been lost …
17:15 Changeset [13477] by smasson

trunk: fix the use of ln_drgice_imp

15:54 Changeset [13476] by smasson

trunk: replace last occurences of rau0 by rho0

15:40 Changeset [13475] by smasson

r4_trunk: supress temporary_r4_trunk

15:36 Changeset [13474] by smasson

trunk: update namelist ref, see #2523

15:07 Changeset [13473] by smasson

trunk: add missing link in CANAL, see #2523

15:05 Changeset [13472] by smasson

trunk: commit changes from r4.0-HEAD from 13284 to 13449, see #2523

12:46 Ticket #2524 (sao_read not compiling) created by smasson
==== Context sao_read not compiling ==== Analysis sao_read is using tsn …
11:40 Changeset [13471] by smasson

r4_trunk: update iceistate.F90 for easy merge…, see #2523

2020-09-15:

12:56 Changeset [13470] by smasson

r4_trunk: second change of DO loops for routines to be merged, see #2523

12:49 Changeset [13469] by smasson

r4_trunk: first change of DO loops for routines to be merged, see #2523

11:48 Changeset [13468] by laurent

Python2.7 to Python3!

09:28 Changeset [13467] by smasson

r4_trunk: merge r4 13331:13348 13412,13444,13445,13449 see #2523

09:27 Changeset [13466] by smasson

r4_trunk: merge r4 13280:13310, see #2523

09:02 Changeset [13465] by smasson

r4_trunk: create temporary merging branch, see #2523

08:55 Changeset [13464] by smasson

remove unnecessary 2020 brabche

2020-09-14:

17:40 Changeset [13463] by andmirek

Ticket #2195:update to trunk 13461

17:38 Ticket #2195 (HPC-08_XXX_fldread_with_XIOS) reopened by andmirek
Reopen this ticket
16:59 Changeset [13462] by dford

Tidy up.

16:45 Developers/Validation/trunk_light edited by smasson
(diff)
16:41 Developers/Validation/trunk_light edited by smasson
(diff)
16:26 Developers/Validation/trunk_light edited by smasson
(diff)
15:06 NEMO_2020WP_Summary_Met_Office_1.pdf attached to Developers Committee/Agenda/2020-09-14 by ayoung
15:04 NEMO_2020WP_Summary_Met_Office_1.pptx attached to Developers Committee/Agenda/2020-09-14 by ayoung
14:53 NEMO code managment.pdf attached to Developers Committee/Agenda/2020-09-14 by smasson
14:53 NEMO_DevCom2020_CMCC.pdf attached to Developers Committee/Agenda/2020-09-14 by diovino
14:51 2020_nemo_cnrs_work.pdf attached to Developers Committee/Agenda/2020-09-14 by smasson
14:20 NEMO DEVCOM14sept2020_C.LEVY_V3.pdf attached to Developers Committee/Agenda/2020-09-14 by clevy
13:56 MOI_2020WP_devco.pdf attached to Developers Committee/Agenda/2020-09-14 by jchanut
MOI 2020 WP progress
12:24 NEMO_Developers_Committee_slides_Sep_2020.pdf attached to Developers Committee by mikebell
NDC Agenda & slides Sep 2020
10:29 Developers/Validation/trunk_light edited by smasson
(diff)
10:19 Developers/Validation/trunk_light edited by smasson
(diff)
10:17 Developers/Validation/trunk_light edited by smasson
(diff)
09:19 Changeset [13461] by smasson

trunk: merge r4.0-HEAD 13263:13278 into the trunk, see #2523

09:16 Changeset [13460] by smasson

trunk: avoid to use undefined values in sbcblk when nn_hls > 1

09:14 Ticket #2523 (phasing 4.0 - trunk) created by smasson
==== Context merge r4.0-HEAD developments in the trunk if not already …

2020-09-11:

14:45 Developers/Validation/trunk_light edited by smasson
(diff)
14:31 Developers/Validation/trunk_light edited by smasson
(diff)
12:55 Changeset [13459] by dford

Fix for getting SWR.

12:26 Developers/Validation/r4.0_light edited by smasson
(diff)
12:24 Developers/Validation/trunk_light edited by smasson
(diff)
12:09 Developers/Validation/trunk_light edited by smasson
(diff)
11:40 Developers/Validation/trunk_light edited by smasson
(diff)
11:30 Ticket #2521 (potentially test undefined values in stpctl and other places...) closed by smasson
fixed: - This bugfix fixes sette errors with ORCA2_SAS_ICE and ICE_AGRIF when …
11:22 Changeset [13458] by smasson

trunk: mpp_min(max)loc testing only inner domain, see #2521

11:10 New topic on Skilled created by kirodh
NEMO v4 DOMAINcfg tool
10:58 Developers/Validation/trunk_light edited by smasson
(diff)
10:45 Developers/Validation/r4.0_light edited by smasson
(diff)
09:56 Developers/Validation/trunk_light edited by smasson
(diff)
09:48 Developers/Validation/r4.0_light edited by smasson
(diff)

2020-09-10:

18:29 Ticket #2520 (Invalid Memory Access in tra_adv_cen) closed by francesca
fixed
17:48 Changeset [13457] by francesca

fix ticket #2520 in trunk

17:42 Changeset [13456] by francesca

fix ticket #2520 in r4.0-HEAD

17:29 Developers/Validation/r4.0_light edited by smasson
(diff)
15:41 Changeset [13455] by jpalmier

update MEDUSA externals revision number

12:32 Developers Committee edited by nemo
(diff)
12:26 Developers Committee/Agenda/2020-09-14 edited by clevy
(diff)
12:25 Developers Committee/Agenda/2020-09-14 created by clevy
11:56 Ticket #2522 (sbcflx defects) created by clem
==== Context The flux formulation (sbcflx) has several defects: 1) The …
08:41 Developers/Validation/r4.0_light edited by smasson
(diff)
08:40 Developers/Validation/r4.0_light edited by smasson
(diff)

2020-09-09:

18:01 Ticket #2521 (potentially test undefined values in stpctl and other places...) created by smasson
==== Context At least when nn_hls > 1 and in some configurations …
09:20 Developers/Validation/r4.0_light edited by smasson
(diff)
08:48 Developers/Validation/trunk_light edited by smasson
(diff)

2020-09-08:

16:40 Developers/Validation/trunk_light edited by smasson
(diff)
15:50 Changeset [13454] by dancopsey

Merge in Catherine Guiavarch's change to implement implicit ice drag to improve stability. Her changes were implemented in:

https://code.metoffice.gov.uk/trac/roses-u/changeset?reponame=&new=161415%40b%2Fv%2F1%2F1%2F4&old=161163%40b%2Fv%2F1%2F1%2F4

13:02 2020WP/KERNEL-03_Storkey_Coward_RK3_stage2 edited by acc
(diff)
12:53 Developers/Validation/trunk_light edited by smasson
(diff)
12:46 Ticket #2520 (Invalid Memory Access in tra_adv_cen) created by francesca
[…] ==== Context There is a memory access error in traadv_cen.F90 …
12:38 Changeset [13453] by dford

Move more DA calls due to FABM changes.

11:54 2020WP/KERNEL-02_Coward_Do Loop Macros_part1 edited by acc
(diff)

2020-09-07:

18:52 Changeset [13452] by dford

Fix for compiling with ifort.

18:50 Changeset [13451] by dford

Modifications to accommodate interaction between NEMO-FABM coupler only saving diagnostics requested in iodef.xml, and the assimilation and 25h/tmb diagnostic code.

16:40 Ticket #2519 (User defined straight open boundary segments and halo size does not work) created by jchanut
==== Context User defined straight open boundary segments (nambdy_seg …
12:01 Changeset [13450] by vancop

create branch

08:48 Tag change on System Team/Agenda/2020-09-10 by smasson
Tags VC added

2020-09-03:

16:44 Ticket #2518 (uninitialised mean sst and sss variables when using SAS and simplified ice ...) closed by gsamson
fixed
16:40 Changeset [13449] by gsamson

add sst_m & sss_m init in ice_rst_read when using SAS + simplified ice restart; ticket #2518

2020-09-02:

18:11 Changeset [13448] by jpalmier

update MEDUSA external — put med_diag back — faster than iomuse

18:09 Changeset [13447] by jpalmier

update MEDUSA source code putting med_diag back — Faster than iomuse

17:26 Ticket #2518 (uninitialised mean sst and sss variables when using SAS and simplified ice ...) created by gsamson
[…] ==== Context & Analysis In the particular case where SAS is used …
10:27 Changeset [13446] by cguiavarch

Create a NEMO 4.0.2 branch with Jerome Chanut implicit sea ice drag

2020-09-01:

18:25 Ticket #2517 (Activation of option to use ice restart file for initial ice conditions ...) closed by acc
fixed: In 13445: […]
18:25 Changeset [13445] by acc

r4.0-HEAD. Simple fix to enable the nn_iceini_file=2 option to work as intended. This fixes #2517

18:22 Ticket #2517 (Activation of option to use ice restart file for initial ice conditions ...) created by acc
==== Context The ice initialisation options includes a nn_iceini_file = 2 …

2020-08-31:

11:01 Ticket #2514 (unallocated ICE variable (a_i_last_couple) when using SAS+OASIS) closed by gsamson
fixed
10:58 Changeset [13444] by gsamson

move 'a_i_last_couple' variable declaration and allocation from ice.F90 to sbccpl.F90; delete cice specific declaration from sbc_ice.F90 and inialize 'info' variable to 'OASIS_idle' in sbc_cpl_snd routine (sbccpl.F90); see ticket #2514

10:52 Ticket #2419 (ASINTER-06_gsamson_ABL_improvement) closed by gsamson
fixed
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