Get the code

# my login
me=smasson
# svn path to NEMO trunk
svnpath=svn+ssh://${me}@forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/NEMO/trunk
# get the revision number of the HEAD
cd trunk
rev=$( svn info $svnpath | grep "Last Changed Rev" | sed -e "s/.*: *//" )
cd ..
# directory name given to the local trunk
dirnemo=trunk_test_perf_${rev}
# checkout the trunk into $dirnemo
svn co $svnpath $dirnemo
#
cd $dirnemo
#

Prepare and compile the tests

• step by step method with all the shell instructions
• quicker method with an input tarfile

link the input files files

ORCA2_ICE_v4.x.gz is available

• on Seb cloud: ​here
• on Jean-Zay : /gpfsstore/rech/fqx/reee217/input_nemo_v4.0
• on Irene : /ccc/store/cont005/ra0542/massons/input_nemo_v4.0

Ice_initialization.nc is available

• on Clément cloud: ​here
• on Jean-Zay : /gpfsstore/rech/fqx/reee217/input_nemo_v4.0
• on Irene : /ccc/store/cont005/ra0542/massons/input_nemo_v4.0

# define path to ORCA2_ICE_v4.x directory. For example:
#dirdata=/ccc/scratch/cont005/ra0542/massons/input_nemo_v4.0/ORCA2_ICE_v4.x
#dirdata=/gpfsscratch/rech/fqx/reee217/input_nemo_v4.0/ORCA2_ICE_v4.x
dirdata=...

# add the new Ice_initialization file to this directory
mv Ice_initialization.nc $dirdata

# link the input files
for dd in cfgs/ORCA2_*/EXP00
do
    cd $dd
    ln -sf $dirdata/* .
    cd -
done

Run!

see the 2 examples of jobs: jobaps_irene.sh​ or jobaps_jeanzay.sh​

for dd in cfgs/ORCA2_*/EXP00
do
    cp jobaps.sh $dd/.   # get jobaps.sh from the attached files
    cd $dd
    qs jobaps.sh  # define qs alias is not already done...
    cd -
done

Check the runs did 5840 time steps

for ff in cfgs/ORCA2_*/EXP00/time.step
do
    echo "$ff: $( cat $ff)"
done

Create aps reports

for dd in cfgs/ORCA2_*/EXP00
do
    cd $dd
    yyyymmdd=$( date +%Y%m%d )
    hhmmss=$( date +%H%M%S )
    rptname=aps_result_${yyyymmdd}_${hhmmss}.txt
    module list > $rptname   # add the list of modules in the report
    echo >> $rptname
    aps-report aps_result_${yyyymmdd} >> $rptname
    cd -
done