Changeset 502 for configs/testing/bash/X64_CURIE.sh

Timestamp:

12/08/16 11:06:35 (7 years ago)

Author:

dubos

Message:

configs/testing : towards first working version

File:

• configs/testing/bash/X64_CURIE.sh (modified) (4 diffs)

configs/testing/bash/X64_CURIE.sh

@@ -1 +1 @@
 #!/bin/bash
+
+# This script provides site-specific functions
+# called by the site-independent scripts
+# create_runs.sh and submit.sh
+
+# NB : we must the queue 'normal' because there seems to be a limit
+# on the number of jobs that can be submitted to queue 'test'
 
 #----------------------------- split_XXX ----------------------------
@@ -11 +18 @@
 function split_mpi_80() {
     setvar nbp 81 nsplit_i 4 nsplit_j 2
+}
+
+#----------------- job submission ------------------
+
+function submit_job_X64_CURIE() # $1=script $* = SLURM OPTIONS
+{
+    TMP=$(mktemp)
+    ccc_msub $1 > $TMP
+    cat $TMP 1>&2
+    cat $TMP | awk '{print $NF }'
+    rm -f $TMP
 }
 
@@ -45 +63 @@
 #MSUB -T 600
 ## Quality of Service required (long [3 days], normal [1 day], test [30 min])
-#MSUB -Q test
+#MSUB -Q normal
 
 export OMP_NUM_THREADS=1
@@ -77 +95 @@
 EOF
 }
+
+#------------------------------ post-processing job -----------------------------
+
+function job_post_X64_CURIE() # LIST
+{
+    DEPLIST=afterany
+    for ID in $* ; do
+        DEPLIST="$DEPLIST:$ID"
+    done
+    cat <<EOF
+#!/bin/bash
+## Request name
+#MSUB -r testing
+#MSUB -q standard 
+#MSUB -A gen7548
+#MSUB -E "--dependency=$DEPLIST"
+## Number of tasks (=MPI processes) to use
+#MSUB -n 1
+## Elapsed time limit in seconds
+#MSUB -T 600
+## Quality of Service required (long [3 days], normal [1 day], test [30 min])
+#MSUB -Q normal
+
+export OMP_NUM_THREADS=1
+# this script is submitted from $ROOT/logs
+cd \${BRIDGE_MSUB_PWD}/..
+
+module purge
+module load licsrv/intel
+module load c/intel/14.0.3.174
+module load c++/intel/14.0.3.174
+module load fortran/intel/14.0.3.174
+module load mkl/14.0.3.174
+module load idb/14.0.3.174
+module load intel/14.0.3.174
+module load mpi/bullxmpi/1.2.8.4
+module load netcdf/4.3.3.1_hdf5_parallel
+module load python
+
+bash/post.sh
+EOF
+}