Changeset 3567 for TOOLS/CMIP6_FORCING/GHG/extract.sh

Timestamp:

02/07/18 14:22:26 (6 years ago)

Author:

tlurton

Message:

Update Th. Lurton
7 Feb. 2018
Changed input file paths to fetch new versions of the files.
For SOLAR, AER_TROP_EMISSIONS, GHG, NITROGEN and OZONE.

File:

• TOOLS/CMIP6_FORCING/GHG/extract.sh (modified) (10 diffs)

TOOLS/CMIP6_FORCING/GHG/extract.sh

@@ +1 @@
+#--Update Th.Lurton 05/02/2018 for paths to new version
+# ** species-directory take hyphens instead of underscores previously;
+# ** likewise for species names within filenames;
+# ** variable names stay with underscores.
+
 #--v3 of my script to extract global mean and put to IGCM format
 
@@ -11 +16 @@
 
 #--dir for annual mean data
-dirin1='/prodigfs/project/input4MIPs/UoM/GHGConcentrations/CMIP/UoM-CMIP-1-2-0/yr/'
-dirin2='gr1-GMNHSH/v20160902'
+dirin1='/prodigfs/esgf/mirror/input4MIPs/CMIP6/CMIP/UoM/UoM-CMIP-1-2-0/atmos/yr/'
+dirin2='gr1-GMNHSH/v20160830'
+#--dirin2 versioning date is different from previously
 
 dirout='./OUTPUT'
@@ -25 +31 @@
 #--N2O we leave unit to ppb
 GHG='N2O'
-name='nitrous_oxide'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+name='nitrous-oxide'
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
 rm -f tmp.txt ${dirout}/${GHG}_CMIP6_0000_2014.txt
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
 paste years.txt tmp.txt > ${dirout}/${GHG}_CMIP6_0000_2014.txt
@@ -35 +41 @@
 GHG='CH4'
 name='methane'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_CMIP6_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
@@ -43 +49 @@
 #--CO2 here we leave unit in ppm
 GHG='CO2'
-name='carbon_dioxide'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+name='carbon-dioxide'
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_CMIP6_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
@@ -54 +60 @@
 GHG='CFC11eq'
 name='cfc11eq'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
@@ -63 +69 @@
 GHG='CFC12eq'
 name='cfc12eq'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_0000_2014.txt ${dirout}/${GHG}_CMIP6_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
@@ -75 +81 @@
 GHG='CFC11'
 name='cfc11'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
@@ -85 +91 @@
 GHG='CFC12'
 name='cfc12'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt
@@ -94 +100 @@
 GHG='HFC134aeq'
 name='hfc134aeq'
-file='mole_fraction_of_'${name}'_in_air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
-dirin=${dirin1}'mole_fraction_of_'${name}'_in_air/'${dirin2}
+file='mole-fraction-of-'${name}'-in-air_input4MIPs_GHGConcentrations_CMIP_UoM-CMIP-1-2-0_gr1-GMNHSH_0000-2014.nc'
+dirin=${dirin1}'mole-fraction-of-'${name}'-in-air/'${dirin2}
 rm -f tmp.txt ${dirout}/${GHG}_0000_2014.txt ${dirout}/CFC11eq_CMIP6_0000_2014.txt
 cdo outputf,%12.4e,3 -selvar,'mole_fraction_of_'${name}'_in_air' ${dirin}/${file} | awk '{print $1}' > tmp.txt