Changeset 3969 for CONFIG/UNIFORM/v6/IPSLESM6/GENERAL
- Timestamp:
- 07/11/18 10:32:51 (6 years ago)
- Location:
- CONFIG/UNIFORM/v6/IPSLESM6/GENERAL
- Files:
-
- 1 added
- 21 edited
Legend:
- Unmodified
- Added
- Removed
-
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/DRIVER/lmdz.driver
r3758 r3969 159 159 IGCM_comp_modifyDefFile nonblocker config.def solaire $value 160 160 161 # Read value for eccentricity from file Eccentricity.txt. If file not existing, take DEFAULT value from file. 162 if [ -f Eccentricity.txt ] ; then 163 value=`grep Annee_${year} Eccentricity.txt | awk -F= '{print $2}'` 164 if [ X"${value}" = X ] ; then 165 # The grep returned empty variable, stop execution 166 IGCM_debug_Exit "The file Eccentricity.txt do not contain the current year." 167 IGCM_debug_Verif_Exit 168 fi 169 else 170 value=DEFAULT 171 fi 172 IGCM_comp_modifyDefFile nonblocker config.def R_ecc $value 173 174 # Read value for obliquity from file Obliquity.txt. If file not existing, take DEFAULT value from file. 175 if [ -f Obliquity.txt ] ; then 176 value=`grep Annee_${year} Obliquity.txt | awk -F= '{print $2}'` 177 if [ X"${value}" = X ] ; then 178 # The grep returned empty variable, stop execution 179 IGCM_debug_Exit "The file Obliquity.txt do not contain the current year." 180 IGCM_debug_Verif_Exit 181 fi 182 else 183 value=DEFAULT 184 fi 185 IGCM_comp_modifyDefFile nonblocker config.def R_incl $value 186 187 # Read value for perihelie from file Perihelie.txt. If file not existing, take DEFAULT value from file. 188 if [ -f Perihelie.txt ] ; then 189 value=`grep Annee_${year} Perihelie.txt | awk -F= '{print $2}'` 190 if [ X"${value}" = X ] ; then 191 # The grep returned empty variable, stop execution 192 IGCM_debug_Exit "The file Perihelie.txt do not contain the current year." 193 IGCM_debug_Verif_Exit 194 fi 195 else 196 value=DEFAULT 197 fi 198 IGCM_comp_modifyDefFile nonblocker config.def R_peri $value 161 199 162 200 # Read value for co2_ppm from file CO2.txt. If file not existing, take DEFAULT value from file. … … 349 387 else 350 388 echo "LMDZ is running in forced mode without ocean model, set type_ocean=force in run.def" 351 IGCM_comp_modifyDefFile blocker run.def type_ocean force389 IGCM_comp_modifyDefFile nonblocker run.def type_ocean force 352 390 fi 353 391 … … 401 439 fi 402 440 441 # config.def : Activate online Ozone chemistry coupled model if chemistry_couple=y 442 if [ ! X${lmdz_UserChoices_chemistry_couple} = X ]; then 443 IGCM_comp_modifyDefFile nonblocker config.def chemistry_couple ${lmdz_UserChoices_chemistry_couple} 444 else 445 IGCM_comp_modifyDefFile nonblocker config.def chemistry_couple n 446 fi 447 403 448 # config.def : Activate reading of ozone in climatology if read_climoz=2 404 449 if [ ! X${lmdz_UserChoices_read_climoz} = X ]; then … … 439 484 fi 440 485 486 # physiq.def : Modify parameter tau_gl if it is set in lmdz.card 487 if [ ! X${lmdz_UserChoices_tau_gl} = X ]; then 488 IGCM_comp_modifyDefFile nonblocker physiq.def tau_gl ${lmdz_UserChoices_tau_gl} 489 else 490 # Take default value set in physiq.def 491 IGCM_comp_modifyDefFile nonblocker config.def tau_gl DEFAULT 492 fi 493 494 441 495 # guide.def : Activate nudging if ok_guide=y set in lmdz.card 442 496 if [ ! X${lmdz_UserChoices_ok_guide} = X ] ; then … … 445 499 IGCM_comp_modifyDefFile nonblocker guide.def ok_guide n 446 500 fi 501 447 502 448 503 ## Read ByPass_hgardfou_teta option in lmdz.card --> divide teta* by 2 if [ $ByPass_hgardfou_teta = 1 ] -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/DRIVER/oasis.driver
r3121 r3969 25 25 esac 26 26 done 27 28 # Initialisation required for AddNoise done during one Period 29 Test_AddNoise_First_Only=y 27 30 28 31 IGCM_debug_PopStack "CPL_Initialize" … … 99 102 IGCM_comp_modifyXmlFile force iodef.xml using_oasis NONE true 100 103 104 if [ X"${Test_AddNoise_First_Only}" = X"y" ]; then 105 106 Test_AddNoise_First_Only=n 107 108 # AddNoise if required but only for one Period 109 110 # Read ByPass_addnoise_sst option in oasis.card --> apply addnoise for sst in CPL restart file if [ $ByPass_addnoise_sst = y ] 111 ByPass_addnoise_sst=${oasis_UserChoices_ByPass_addnoise_sst} 112 if [ X"${ByPass_addnoise_sst}" = X"y" ] ; then 113 114 ByPass_PerturbExe=${oasis_UserChoices_ByPass_PerturbExe} 115 ByPass_FileOut=${oasis_UserChoices_ByPass_FileOut} 116 ByPass_PerturbVar=${oasis_UserChoices_ByPass_PerturbVar} 117 ByPass_PerturbAmp=${oasis_UserChoices_ByPass_PerturbAmp} 118 119 IGCM_sys_Chmod 644 ${RUN_DIR}/${ByPass_FileOut}.nc 120 IGCM_debug_Print 1 "${ByPass_PerturbExe} ${RUN_DIR}/${ByPass_FileOut}.nc ${ByPass_PerturbVar} ${ByPass_PerturbAmp}" 121 122 ${ByPass_PerturbExe} ${RUN_DIR}/${ByPass_FileOut}.nc ${ByPass_PerturbVar} ${ByPass_PerturbAmp} 123 if [ $? -ne 0 ] ; then 124 IGCM_debug_Exit "Error with $( basename ${ByPass_PerturbExe} )" 125 IGCM_debug_Verif_Exit 126 fi 127 128 echo 129 IGCM_debug_Print 1 "ByPass_addnoise_sst : applied addnoise for sst in CPL restart file" 130 echo 131 ByPass_addnoise_sst=n 132 # necessary to reset ByPass in next Period during the same Job (PeriodNb<>1) 133 export oasis_UserChoicesByPass_addnoise_sst=n 134 IGCM_card_WriteOption ${SUBMIT_DIR}/COMP/oasis.card UserChoices ByPass_addnoise_sst "${ByPass_addnoise_sst}" 135 fi 136 137 fi 138 101 139 IGCM_debug_PopStack "CPL_Update" 102 140 } -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/DRIVER/opa9.driver
r3758 r3969 69 69 fi 70 70 71 if [[ ${opa9_UserChoices_TimeOrigin} -gt ${InitYear} ]] ; then72 echo73 echo74 IGCM_debug_Exit "TimeOrigin=${opa9_UserChoices_TimeOrigin} is greater than initial year=${InitYear}. IT MUST BE LOWER ! Change this value in opa9.card"75 IGCM_debug_Verif_Exit76 fi77 78 79 71 IGCM_debug_PopStack "OCE_Initialize" 80 72 … … 126 118 OPA_NRSTDT=2 127 119 #echo "OPA RESTART" 128 IGCM_debug_Print 1 'WARNING : dangerous option '120 IGCM_debug_Print 1 'WARNING : dangerous option for NEMO opa9 pisces lim3' 129 121 IGCM_debug_Print 1 'Reproducibility_after_Restart forced ie kt forced to kt red in restart file : ' ${opa9_UserChoices_Reproducibility_after_restart} 122 130 123 elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_OCE_Restart}" = "n" ] ) ; then 131 124 OPA_LRSTAR=.FALSE. … … 166 159 167 160 if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 168 NEMO_KT_FROM_RESTART=$(ncdump -v kt restartopa_0000.nc|grep 'kt ='|awk '{print $3}' ) 161 ##-- choose the right restart file 162 NEMO_RESTART_FILE=restartopa.nc 163 [ -f restartopa_0000.nc ] && NEMO_RESTART_FILE=restartopa_0000.nc 164 ##-- Getting from restart file the last time step of the run at which we want to re-start 165 NEMO_KT_FROM_RESTART=$(ncdump -v kt ${NEMO_RESTART_FILE}|grep 'kt ='|awk '{print $3}' ) 166 167 if ( [ "${CumulPeriod}" -eq 1 ] ) ; then 168 ## Force the date in the restart file to be the last day before the begining of the new run 169 dateendprevious=$( IGCM_date_AddDaysToGregorianDate ${DateBegin} -1 ) 170 IGCM_debug_Print 1 "Previous Date ${dateendprevious}" 171 IGCM_debug_Print 1 "cmd done to modify NEMO restartfile: ncap2 -s ndastp=${dateendprevious} ${NEMO_RESTART_FILE} tmp.nc" 172 if [ -f restartopa_0000.nc ] ; then 173 typeset -Z4 ncpu=0 174 while [ $ncpu -lt ${OCE_PROC_MPI} ] ; do 175 ncap2 -s "ndastp=${dateendprevious}" restartopa_${ncpu}.nc tmp.nc 176 mv tmp.nc restartopa_${ncpu}.nc 177 (( ncpu = ncpu + 1 )) 178 done 179 else 180 ncap2 -s "ndastp=${dateendprevious}" ${NEMO_RESTART_FILE} tmp.nc 181 mv tmp.nc ${NEMO_RESTART_FILE} 182 fi 183 ##-- Getting from restart file the "new" restart date of run at which we want to re-start 184 NEMO_NDASTP_FROM_RESTART=$(ncdump -v ndastp ${NEMO_RESTART_FILE}|grep 'ndastp ='|awk '{print $3}' ) 185 IGCM_debug_Print 1 "NEMO_NDASTP (from Restart) for 1st Period : ${NEMO_NDASTP_FROM_RESTART}" 186 187 fi 188 169 189 (( NEMO_NIT000 = NEMO_KT_FROM_RESTART + 1 )) 170 190 (( NEMO_NITEND = NEMO_KT_FROM_RESTART + OPA_NITEND - OPA_NIT000 + 1 )) … … 208 228 209 229 210 IGCM_comp_modifyXmlFile force context_nemo.xml ref_year NONE ${ opa9_UserChoices_TimeOrigin}230 IGCM_comp_modifyXmlFile force context_nemo.xml ref_year NONE ${InitYear} 211 231 212 232 213 # vargas/titane/MPP and switch from 1 proc to 5 procs. We need to suppres restartopa the second month, if restartopa_0000 exist233 # for MPP and switch to different number of procs for NEMO. We need to suppres restartopa the second period, if restartopa_0000 exist 214 234 # same thing for restart_trc and restart_ice_in 215 235 -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/DRIVER/orchidee.driver
r3687 r3969 59 59 else 60 60 IGCM_comp_modifyDefFile nonblocker orchidee.def VEGET_UPDATE 0Y 61 fi 62 63 # Set LAI_MAP in orchidee.def acording to value set in orchidee.card section UserChoices 64 # If LAI_MAP is not definded in orchidee.card, set default value n 65 # Note: this option is only read by ORCHIDEE if starting without restart files 66 if [ ! X${orchidee_UserChoices_LAI_MAP} = X ] ; then 67 IGCM_comp_modifyDefFile nonblocker orchidee.def LAI_MAP ${orchidee_UserChoices_LAI_MAP} 68 else 69 IGCM_comp_modifyDefFile nonblocker orchidee.def LAI_MAP DEFAULT 70 fi 71 72 # Set DO_WOOD_HARVEST in orchidee.def acording to value set in orchidee.card section UserChoices 73 # If DO_WOOD_HARVEST is not definded in orchidee.card, set default value y 74 if [ ! X${orchidee_UserChoices_DO_WOOD_HARVEST} = X ] ; then 75 IGCM_comp_modifyDefFile nonblocker orchidee.def DO_WOOD_HARVEST ${orchidee_UserChoices_DO_WOOD_HARVEST} 76 else 77 IGCM_comp_modifyDefFile nonblocker orchidee.def DO_WOOD_HARVEST DEFAULT 61 78 fi 62 79 -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/DRIVER/pisces.driver
r3758 r3969 43 43 44 44 ##-- Restart configuration 45 if ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_MBG_Restart}" = "n" ] ) ; then 45 ##-- Restart configuration 46 if ( [ "${opa9_UserChoices_Reproducibility_after_restart}" = "y" ] ) ; then 47 TOP_LN_RSTR=.TRUE. 48 TOP_NN_RSTR=2 49 IGCM_debug_Print 1 'WARNING : dangerous option for NEMO pisces too' 50 IGCM_debug_Print 1 'Reproducibility_after_Restart forced : ' ${opa9_UserChoices_Reproducibility_after_restart} 51 52 elif ( [ "${CumulPeriod}" -eq 1 ] && [ "${config_MBG_Restart}" = "n" ] ) ; then 46 53 47 54 #echo "NO RESTART FOR TOP" … … 56 63 57 64 # If we start from IPSLCM5* restart files. 58 for file in restart_trc*.nc ; do 65 for file in restart_trc*.nc ; do 66 IGCM_debug_Print 1 "cmd done to modify IPSLCM5* NEMO pisces restartfile: " ncrename -v TRBDSi,TRBGSi -v TRNDSi,TRNGSi -v TRNBSi,TRNDSi -v TRBBSi,TRBDSi ${file} > /dev/null 2>&1 59 67 ncrename -v TRBDSi,TRBGSi -v TRNDSi,TRNGSi -v TRNBSi,TRNDSi -v TRBBSi,TRBDSi ${file} > /dev/null 2>&1 60 done68 done 61 69 62 70 else -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/DRIVER/xios.driver
r2606 r3969 19 19 IGCM_comp_modifyXmlFile force iodef.xml using_server NONE true 20 20 21 # Activate 2nd server level for CMIP6 type experiments (CMIP6 workflow) 22 if [ X"$( echo ${config_UserChoices_ExpType} | grep CMIP6 )" != "X" ] ; then 23 IGCM_comp_modifyXmlFile force iodef.xml using_server2 NONE true 24 fi 25 21 26 if [ -f namcouple ] ; then 22 27 sed -e "s/2 LMDZ oceanx/3 LMDZ oceanx ${config_Executable_IOS[1]}/" namcouple > namcouple.tmp -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/config.def_actuel
r3687 r3969 1 1 ## Cycle diurne ou non 2 cycle_diurne=y 2 iflag_cycle_diurne=1 3 3 ## Soil Model ou non 4 4 soil_model=y … … 15 15 # Parametres "orbitaux/ ere geologique" 16 16 # 17 ### R_ecc = Excentricite 18 R_ecc = 0.01671519 ### R_peri = Equinoxe 20 R_peri = 102.721 ### R_incl = Inclinaison 22 R_incl = 23.44117 ### R_ecc = Excentricite (lue dans Eccentricity.txt) 18 R_ecc = _AUTO_: DEFAULT = 0.016715 19 ### R_peri = Equinoxe (lue dans Perihelie.txt) 20 R_peri = _AUTO_: DEFAULT = 102.7 21 ### R_incl = Inclinaison (lue dans Obliquity.txt) 22 R_incl = _AUTO_: DEFAULT = 23.441 23 23 ### solaire = Constante solaire 24 24 #solaire = _AUTO_ : DEFAULT = 1366.0896 25 25 solaire = _AUTO_ : DEFAULT = 1361.20 26 # solaire est modifie avec les valeurs du fichier SOLARANDVOLCANOES.txt 26 27 ### constante solaire lue dans un fichier par defaut 27 28 ok_suntime_rrtm=y … … 52 53 ### aerosol coupling = online (y) or offline (n) 53 54 aerosol_couple=_AUTO_ 55 ### Ozone chemistry coupling = online (y) or offline (n) 56 chemistry_couple=_AUTO_ 54 57 ### flag_aerosol = type of coupled aerosol, if aerosol offline 55 58 ### 0 => no aerosol, 1 => sulfate only, 2 => bc only, 3 => pom only, 4 => seasalt only, 5 => dust only, 6 => all aerosol -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/config.def_annuel
r3687 r3969 1 1 ## Cycle diurne ou non 2 cycle_diurne=y 2 iflag_cycle_diurne=1 3 3 ## Soil Model ou non 4 4 soil_model=y … … 15 15 # Parametres "orbitaux/ ere geologique" 16 16 # 17 ### R_ecc = Excentricite 18 R_ecc = 0.01671519 ### R_peri = Equinoxe 20 R_peri = 102.721 ### R_incl = Inclinaison 22 R_incl = 23.44117 ### R_ecc = Excentricite (lue dans Eccentricity.txt) 18 R_ecc = _AUTO_: DEFAULT = 0.016715 19 ### R_peri = Equinoxe (lue dans Perihelie.txt) 20 R_peri = _AUTO_: DEFAULT = 102.7 21 ### R_incl = Inclinaison (lue dans Obliquity.txt) 22 R_incl = _AUTO_: DEFAULT = 23.441 23 23 ### solaire = Constante solaire 24 24 # solaire est modifie avec les valeurs du fichier SOLARANDVOLCANOES.txt … … 53 53 ### aerosol coupling = online (y) or offline (n) 54 54 aerosol_couple=_AUTO_ 55 ### Ozone chemistry coupling = online (y) or offline (n) 56 chemistry_couple=_AUTO_ 55 57 ### flag_aerosol = type of coupled aerosol, if aerosol offline 56 58 ### 0 => no aerosol, 1 => sulfate only, 2 => bc only, 3 => pom only, 4 => seasalt only, 5 => dust only, 6 => all aerosol -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/config.def_preind
r3687 r3969 1 1 ## Cycle diurne ou non 2 cycle_diurne=y 2 iflag_cycle_diurne=1 3 3 4 4 ## Pas de temps de couplage (s). … … 17 17 # Parametres "orbitaux/ ere geologique" 18 18 # 19 ### R_ecc = Excentricite 20 R_ecc = 0.01671521 ### R_peri = Equinoxe 22 R_peri = 102.723 ### R_incl = Inclinaison 24 R_incl = 23.44125 ### solaire = Constante solaire 19 ### R_ecc = Excentricite (lue dans Eccentricity.txt) 20 R_ecc = _AUTO_: DEFAULT = 0.016715 21 ### R_peri = Equinoxe (lue dans Perihelie.txt) 22 R_peri = _AUTO_: DEFAULT = 102.7 23 ### R_incl = Inclinaison (lue dans Obliquity.txt) 24 R_incl = _AUTO_: DEFAULT = 23.441 25 ### solaire = Constante solaire (lue dans SOLARANDVOLCANOES.txt) 26 26 solaire = _AUTO_: DEFAULT = 1361.20 27 27 ### constante solaire lue dans un fichier par defaut … … 53 53 ### aerosol coupling = online (y) or offline (n) 54 54 aerosol_couple=_AUTO_ 55 ### Ozone chemistry coupling = online (y) or offline (n) 56 chemistry_couple=_AUTO_ 55 57 ### flag_aerosol = type of coupled aerosol, if aerosol offline 56 58 ### 0 => no aerosol, 1 => sulfate only, 2 => bc only, 3 => pom only, 4 => seasalt only, 5 => dust only, 6 => all aerosol -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/file_def_nemo-lim2.xml
r3758 r3969 10 10 --> 11 11 12 <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level=" 0" >12 <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level="4" > 13 13 14 14 <file_group id="1ts_lim" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/file_def_nemo-lim3.xml
r3758 r3969 10 10 --> 11 11 12 <file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1d" min_digits="4" compression_level=" 0" >12 <file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1d" min_digits="4" compression_level="4" > 13 13 14 14 <file_group id="1ts_lim" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/file_def_nemo-opa.xml
r3758 r3969 9 9 --> 10 10 11 <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level=" 0" >11 <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level="4" > 12 12 13 13 <file_group id="1ts_opa" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> … … 396 396 </file> 397 397 398 <file id="file9" name_suffix="_diaptr" description="diaptr variables" > 399 <field field_ref="zomsfglo" name="zomsfglo" grid_ref="grid_ptr_W_3D" level="1" /> 400 <field field_ref="zomsfatl" name="zomsfatl" grid_ref="grid_ptr_W_3D" level="1" /> 401 <field field_ref="zomsfpac" name="zomsfpac" grid_ref="grid_ptr_W_3D" level="1" /> 402 <field field_ref="zomsfind" name="zomsfind" grid_ref="grid_ptr_W_3D" level="1" /> 403 <field field_ref="zomsfipc" name="zomsfipc" grid_ref="grid_ptr_W_3D" level="1" /> 398 <file id="file9" name_suffix="_diaptr_T" description="diaptr variables" > 404 399 <field field_ref="zotemglo" name="zotemglo" grid_ref="grid_ptr_T_3D" level="2" /> 405 400 <field field_ref="zotematl" name="zotematl" grid_ref="grid_ptr_T_3D" level="2" /> … … 422 417 <field field_ref="sopstldf" name="sopstldf" grid_ref="grid_ptr_T_2D" level="2" /> 423 418 </file> 419 420 <file id="file33" name_suffix="_diaptr_W" description="diaptr variables" > 421 <field field_ref="zomsfglo" name="zomsfglo" grid_ref="grid_ptr_W_3D" level="1" /> 422 <field field_ref="zomsfatl" name="zomsfatl" grid_ref="grid_ptr_W_3D" level="1" /> 423 <field field_ref="zomsfpac" name="zomsfpac" grid_ref="grid_ptr_W_3D" level="1" /> 424 <field field_ref="zomsfind" name="zomsfind" grid_ref="grid_ptr_W_3D" level="1" /> 425 <field field_ref="zomsfipc" name="zomsfipc" grid_ref="grid_ptr_W_3D" level="1" /> 426 </file> 427 424 428 425 429 … … 537 541 </file> 538 542 539 <file id="file14" name_suffix="_diaptr " description="diaptr variables" >543 <file id="file14" name_suffix="_diaptr_T" description="diaptr variables" > 540 544 <field field_ref="zotemglo" grid_ref="grid_ptr_T_3D" level="2" /> 541 545 <field field_ref="zosalglo" grid_ref="grid_ptr_T_3D" level="2" /> 542 546 <field field_ref="zosrfglo" grid_ref="grid_ptr_T_3D" level="2" /> 543 <field field_ref="zomsfglo" grid_ref="grid_ptr_W_3D" level="2" />544 547 <field field_ref="zotematl" grid_ref="grid_ptr_T_3D" level="2" /> 545 548 <field field_ref="zosalatl" grid_ref="grid_ptr_T_3D" level="2" /> 546 549 <field field_ref="zosrfatl" grid_ref="grid_ptr_T_3D" level="2" /> 547 <field field_ref="zomsfatl" grid_ref="grid_ptr_W_3D" level="2" />548 550 <field field_ref="zotempac" grid_ref="grid_ptr_T_3D" level="2" /> 549 551 <field field_ref="zosalpac" grid_ref="grid_ptr_T_3D" level="2" /> 550 552 <field field_ref="zosrfpac" grid_ref="grid_ptr_T_3D" level="2" /> 551 552 553 </file> 554 555 <file id="file34" name_suffix="_diaptr_W" description="diaptr variables" > 556 <field field_ref="zomsfglo" grid_ref="grid_ptr_W_3D" level="2" /> 557 <field field_ref="zomsfatl" grid_ref="grid_ptr_W_3D" level="2" /> 558 </file> 559 553 560 554 561 <file id="file32" name_suffix="_trdtra" description="ocean trends variables" > -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/file_def_nemo-pisces.xml
r3758 r3969 10 10 --> 11 11 12 <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level=" 0" >12 <file_definition type="one_file" name="@expname@_@freq@" sync_freq="1d" min_digits="4" compression_level="4" > 13 13 14 14 <file_group id="1ts_pis" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> … … 211 211 </file> 212 212 213 <file id="file23" name_suffix="_age" description="Age inert tracer" > 214 <field field_ref="Age" name="Age" operation="average" freq_op="1y" level="1" > @Age_E3T / @e3t </field> 215 </file> 213 <file id="file23" name_suffix="_inerttrc" description="Inert tracer" > 214 <field field_ref="Age" name="Age" operation="average" freq_op="1y" level="1" > @Age_E3T / @e3t </field> 215 <field field_ref="CFC11" name="CFC11" operation="average" freq_op="1y" level="2" > @CFC11_E3T / @e3t </field> 216 <field field_ref="CFC12" name="CFC12" operation="average" freq_op="1y" level="1" > @CFC12_E3T / @e3t </field> 217 <field field_ref="SF6" name="SF6" operation="average" freq_op="1y" level="2" > @SF6_E3T / @e3t </field> 218 <field field_ref="qtr_CFC11" name="qtrCFC11" level="2" /> 219 <field field_ref="qint_CFC11" name="qintCFC11" level="2" /> 220 <field field_ref="qtr_CFC12" name="qtrCFC12" level="1" /> 221 <field field_ref="qint_CFC12" name="qintCFC12" level="1" /> 222 <field field_ref="qtr_SF6" name="qtrSF6" level="2" /> 223 <field field_ref="qint_SF6" name="qintSF6" level="2" /> 224 </file> 225 216 226 217 227 </file_group> -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/iodef.xml
r3758 r3969 15 15 <variable_definition> 16 16 <variable_group id="server"> 17 <variable id="using_server2" type="bool"> true</variable>17 <variable id="using_server2" type="bool">false</variable> 18 18 <variable id="ratio_server2" type="int">50</variable> 19 19 </variable_group> … … 26 26 27 27 <variable_group id="parameters" > 28 <variable id="using_server" type="bool"> true</variable>28 <variable id="using_server" type="bool">false</variable> 29 29 <variable id="info_level" type="int">1</variable> 30 30 <variable id="print_file" type="bool">false</variable> … … 33 33 </variable_group> 34 34 <variable id="activate_non_distributed_transformation" type="bool">true</variable> 35 <variable id="recv_field_timeout" type="double">3000.0</variable> 35 36 </variable_definition> 36 37 -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/namelist_ORCA1_cfg
r3687 r3969 290 290 !----------------------------------------------------------------------- 291 291 / 292 !-----------------------------------------------------------------------293 &namtra_adv_mle ! mixed layer eddy parametrisation (Fox-Kemper param)294 !-----------------------------------------------------------------------295 /296 292 !---------------------------------------------------------------------------------- 297 293 &namtra_ldf ! lateral diffusion scheme for tracers -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/orchidee.def_CWRR
r3687 r3969 80 80 NVM=15 81 81 PFT_TO_MTC=1,2,3,4,5,6,7,8,9,10,11,12,13,10,10 82 NAME__10='temperate C3 grass '83 NAME__14='tropical C3 grass '84 NAME__15='boreal C3 grass '82 PFT_NAME__10='temperate C3 grass ' 83 PFT_NAME__14='tropical C3 grass ' 84 PFT_NAME__15='boreal C3 grass ' 85 85 86 86 # STRESS_GS, STRESS_GM, STRESS_VCMAX : Stress on GS, GM and VCMAX … … 137 137 138 138 # Activate harvest of wood 139 DO_WOOD_HARVEST= y139 DO_WOOD_HARVEST=_AUTO_ : DEFAULT=y 140 140 141 141 # Growth respiration (default values except for PFT=14 and PFT=15) … … 190 190 VEGET_UPDATE = _AUTO_ 191 191 192 # Read lai map (default n) 193 LAI_MAP = _AUTO_ : DEFAULT = n 192 194 193 195 # Parameters related to surface and thermal physical properties -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/orchidee.def_Choi
r3687 r3969 64 64 NVM=15 65 65 PFT_TO_MTC=1,2,3,4,5,6,7,8,9,10,11,12,13,10,10 66 PFT_NAME__10='temperate C3 grass ' 67 PFT_NAME__14='tropical C3 grass ' 68 PFT_NAME__15='boreal C3 grass ' 66 69 67 70 # Set NVM and PFT_TO_MTC as follow to run with PFTmap files containing 13 pfts … … 80 83 VEGET_UPDATE = _AUTO_ 81 84 85 # Read lai map (default n) 86 LAI_MAP = _AUTO_ : DEFAULT = n 82 87 83 88 # Create river description file -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/physiq.def_NPv6.1
r3758 r3969 1 1 # 2 # $Id: physiq.def_NPv6.1 3 668 2018-03-20 14:55:33Z lfairhead$2 # $Id: physiq.def_NPv6.1 3964 2018-07-06 11:44:14Z acosce $ 3 3 # 4 4 -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/ping_LMDZ.xml
r3758 r3969 1 <!-- $Id: CMIP6_ping_atmos.xml 3 285 2018-03-19 10:16:35Z fairhead $ -->1 <!-- $Id: CMIP6_ping_atmos.xml 3353 2018-06-28 09:52:05Z fairhead $ --> 2 2 <!-- Ping files generated by dr2xml 0.27 using Data Request 01.00.21 --> 3 3 <!-- lrealms= ['atmos'] --> … … 57 57 <field id="CMIP6_clcalipso2" field_ref="clcalipso2" /> <!-- P1 (%) cloud_area_fraction_in_atmosphere_layer : CALIPSO Cloud Fraction Undetected by CloudSat --> 58 58 <field id="CMIP6_clcalipsoice" field_ref="clcalipsoice" /> <!-- P1 (%) ice_cloud_area_fraction_in_atmosphere_layer : CALIPSO Ice Cloud Fraction --> 59 <field id="CMIP6_clcalipsoliq" field_ref="clcalipso ice" /> <!-- P1 (%) liquid_cloud_area_fraction_in_atmosphere_layer : CALIPSO Liquid Cloud Fraction -->59 <field id="CMIP6_clcalipsoliq" field_ref="clcalipsoliq" /> <!-- P1 (%) liquid_cloud_area_fraction_in_atmosphere_layer : CALIPSO Liquid Cloud Fraction --> 60 60 <field id="CMIP6_cldicemxrat" field_ref="cldicemxrat" /> <!-- P2 (1) cloud_ice_mixing_ratio : Cloud Ice Mixing Ratio --> 61 61 <field id="CMIP6_cldnci" field_ref="dummy_XY" /> <!-- P1 (m-3) number_concentration_of_ice_crystals_in_air_at_ice_cloud_top : Ice Crystal Number Concentration of Cloud Tops --> … … 215 215 <field id="CMIP6_reffsnowc" field_ref="dummy_XYA" /> <!-- P2 (m) effective_radius_of_convective_cloud_snow_particle : This is defined as the in-cloud ratio of the third moment over the second moment of the particle size distribution (obtained by considering only the cloudy portion of the grid cell). --> 216 216 <field id="CMIP6_reffsnows" field_ref="dummy_XYA" /> <!-- P2 (m) effective_radius_of_stratiform_cloud_snow_particle : This is defined as the in-cloud ratio of the third moment over the second moment of the particle size distribution (obtained by considering only the cloudy portion of the grid cell). --> 217 <field id="CMIP6_rld" field_ref="rld" /> <!-- P1 (W m-2) downwelling_longwave_flux_in_air : Downwelling Longwave Radiation -->217 <field id="CMIP6_rld" field_ref="rld"> rld*(-1.) </field> <!-- P1 (W m-2) downwelling_longwave_flux_in_air : Downwelling Longwave Radiation --> 218 218 <field id="CMIP6_rld4co2" field_ref="rld4co2" /> <!-- P1 (W m-2) downwelling_longwave_flux_in_air : Downwelling Longwave Radiation 4XCO2 Atmosphere --> 219 219 <field id="CMIP6_rldcs" field_ref="rldcs" /> <!-- P1 (W m-2) downwelling_longwave_flux_in_air_assuming_clear_sky : Downwelling Clear-Sky Longwave Radiation --> … … 360 360 <field id="CMIP6_ygwdparam" field_ref="west_gwstress" /> <!-- P2 (Pa) atmosphere_northward_stress_due_to_gravity_wave_drag : y_gravity_wave_drag_param --> 361 361 <field id="CMIP6_zfull" field_ref="zfull" /> <!-- P2 (m) height_above_reference_ellipsoid : This is actual height above mean sea level, not geopotential height --> 362 <field id="CMIP6_zg" field_ref="geop "/> <!-- P1 (m) geopotential_height : Geopotential height on the 1000 hPa surface -->362 <field id="CMIP6_zg" field_ref="geoph" /> <!-- P1 (m) geopotential_height : Geopotential height on the 1000 hPa surface --> 363 363 <field id="CMIP6_zhalf" field_ref="zhalf" /> <!-- P2 (m) height_above_reference_ellipsoid : This is actual height above mean sea level, not geopotential height. This is actual height above mean sea level, not geopotential height. Includes both the top of the model atmosphere and surface levels. --> 364 364 <field id="CMIP6_zmla" field_ref="s_pblh" /> <!-- P1 (m) atmosphere_boundary_layer_thickness : Height of Boundary Layer --> -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/ping_nemo.xml
r3758 r3969 53 53 <field id="CMIP6_difvmfdo" field_ref="dummy_XYO" /> <!-- P1 (m2 s-1) ocean_vertical_momentum_diffusivity_due_to_form_drag : unset **** NEMO-RD not relevant for IPSL CM6--> 54 54 <field id="CMIP6_difvmo" field_ref="avm_e3w" expr="@avm_e3w / @e3w" > avm_e3w / e3w </field> <!-- P1 (m2 s-1) ocean_vertical_momentum_diffusivity : unset --> 55 <field id="CMIP6_difvmto" field_ref="av_ tide_e3w" expr="@av_tide_e3w / @e3w" > av_tide_e3w / e3w </field> <!-- P1 (m2 s-1) ocean_vertical_momentum_diffusivity_due_to_tides : unset -->55 <field id="CMIP6_difvmto" field_ref="av_wave_e3w" expr="@av_wave_e3w / @e3w" > av_wave_e3w / e3w </field> <!-- P1 (m2 s-1) ocean_vertical_momentum_diffusivity_due_to_tides : unset --> 56 56 <field id="CMIP6_difvso" field_ref="avs_e3w" expr="@avs_e3w / @e3w" > avs_e3w / e3w </field> <!-- P1 (m2 s-1) ocean_vertical_salt_diffusivity : Vertical/dianeutral diffusivity applied to prognostic salinity field. --> 57 57 <field id="NEMO_difvso_noevd" field_ref="avs_e3w" expr="(@avs_e3w - @avt_evd_e3w) / @e3w" > ( avs_e3w - avt_evd_e3w) / e3w </field> <!-- P3 (m2 s-1) ocean vertical heat diffusivity without evd contribution **** NEMO-RD : extra variable not required by CMIP6 --> 58 58 <field id="CMIP6_difvtrbo" field_ref="dummy_XYO" /> <!-- P1 (m2 s-1) ocean_vertical_tracer_diffusivity_due_to_background : unset *** NEMO-RD : not relevant for IPSLCM6 --> 59 <field id="CMIP6_difvtrto" field_ref="av_ tide_e3w" expr="@av_tide_e3w / @e3w" > av_tide_e3w / e3w </field> <!-- P1 (m2 s-1) ocean_vertical_tracer_diffusivity_due_to_tides : unset -->59 <field id="CMIP6_difvtrto" field_ref="av_wave_e3w" expr="@av_wave_e3w / @e3w" > av_wave_e3w / e3w </field> <!-- P1 (m2 s-1) ocean_vertical_tracer_diffusivity_due_to_tides : unset --> 60 60 <field id="CMIP6_dispkevfo" field_ref="dispkevfo" /> <!-- P1 (W m-2) ocean_kinetic_energy_dissipation_per_unit_area_due_to_vertical_friction. *** NEMO-RD : provides 2D (vertical integral) while not requested by CMIP6 (Griffies et al. 2016) while CMIP5 requested 3D field --> 61 61 <field id="CMIP6_dispkexyfo" field_ref="dummy_XY0" /> <!-- P3 (W m-2) ocean_kinetic_energy_dissipation_per_unit_area_due_to_xy_friction : Depth integrated impacts on kinetic energy arising from lateral frictional dissipation associated with Laplacian and/or biharmonic viscosity. For CMIP5, this diagnostic was 3d, whereas the CMIP6 depth integrated diagnostic is sufficient for many purposes and reduces archive requirements. --> … … 142 142 <field id="CMIP6_pso" field_ref="dummy_XY" /> <!-- P1 (Pa) sea_water_pressure_at_sea_water_surface : Sea Water Pressure at Sea Water Surface **** NEMO-RD: not relevant for IPSLCM6 --> 143 143 <field id="CMIP6_rlntds" field_ref="dummy_XY" /> <!-- P1 (W m-2) surface_net_downward_longwave_flux : This is defined as "where ice_free_sea over sea" **** NEMO-RD: does not do --> 144 <field id="CMIP6_rsdo" field_ref="qsr3d_e3t " expr="@qsr3d_e3t / @e3t" > qsr3d_e3t / e3t </field><!-- P1 (W m-2) downwelling_shortwave_flux_in_sea_water : Downwelling Shortwave Radiation in Sea Water -->144 <field id="CMIP6_rsdo" field_ref="qsr3d_e3t_SBC" expr="@qsr3d_e3t_SBC / @e3t_SBC" > qsr3d_e3t_SBC / e3t_SBC </field> <!-- P1 (W m-2) downwelling_shortwave_flux_in_sea_water : Downwelling Shortwave Radiation in Sea Water --> 145 145 <field id="CMIP6_rsdoabsorb" field_ref="dummy_XYO" /> <!-- P2 (W m-2) net_rate_of_absorption_of_shortwave_energy_in_ocean_layer : Net Rate of Absorption of Shortwave Energy in Ocean Layer **** NEMO-RD: does not do : easy to compute offline --> 146 146 <field id="CMIP6_rsntds" field_ref="qsr" /> <!-- P1 (W m-2) net_downward_shortwave_flux_at_sea_water_surface : This is the flux into the surface of liquid sea water only. This excludes shortwave flux absorbed by sea ice, but includes any light that passes through the ice and is absorbed by the ocean. --> 147 <field id="CMIP6_sf6" field_ref="dummy_XYO" /><!-- P2 (mol m-3) mole_concentration_of_sulfur_hexafluoride_in_sea_water : Moles Per Unit Mass of SF6 in sea water **** NEMO-RD: does not do -->147 <field id="CMIP6_sf6" field_ref="SF6_E3T" expr="@SF6_E3T / @e3t" > SF6_E3T / e3t </field> <!-- P2 (mol m-3) mole_concentration_of_sulfur_hexafluoride_in_sea_water : Moles Per Unit Mass of SF6 in sea water **** NEMO-RD: does not do --> 148 148 <field id="CMIP6_sfdsi" field_ref="saltflx" > this * $convSpsu </field> <!-- P1 (kg m-2 s-1) downward_sea_ice_basal_salt_flux : This field is physical, and it arises since sea ice has a nonzero salt content, so it exchanges salt with the liquid ocean upon melting and freezing. --> 149 149 <field id="CMIP6_sfriver" field_ref="dummy_XY" /> <!-- P1 (kg m-2 s-1) salt_flux_into_sea_water_from_rivers : This field is physical, and it arises when rivers carry a nonzero salt content. Often this is zero, with rivers assumed to be fresh. NEMO-RD : not relevant for IPSLCM6 --> … … 208 208 <field id="CMIP6_siage" field_ref="iceage" /> <!-- P1 (s) age_of_sea_ice : Age of sea ice --> 209 209 <field id="CMIP6_siareaacrossline" field_ref="transport_siarea_transect" /> <!-- P2 (m2 s-1) siareaacrossline : net (sum of transport in all directions) sea ice area transport through the following four passages, positive into the Arctic Ocean 1. Fram Strait = (11.5W,81.3N to (10.5E,79.6N) 2. Canadian Archipelego = (128.2W,70.6N) to (59.3W,82.1N) 3. Barents opening = (16.8E,76.5N) to (19.2E,70.2N) 4. Bering Strait = (171W,66.2N) to (166W,65N) --> 210 <field id="CMIP6_siarean" field_ref="NH_ icearea" /> <!-- P2 (1e6 km2) sea_ice_area : total area of sea ice in the Northern hemisphere -->211 <field id="CMIP6_siareas" field_ref="SH_ icearea" /> <!-- P2 (1e6 km2) sea_ice_area : total area of sea ice in the Southern hemisphere -->210 <field id="CMIP6_siarean" field_ref="NH_sc_icearea" /> <!-- P2 (1e6 km2) sea_ice_area : total area of sea ice in the Northern hemisphere --> 211 <field id="CMIP6_siareas" field_ref="SH_sc_icearea" /> <!-- P2 (1e6 km2) sea_ice_area : total area of sea ice in the Southern hemisphere --> 212 212 <field id="CMIP6_sicompstren" field_ref="icestr" /> <!-- P2 (N m-1) compressive_strength_of_sea_ice : Computed strength of the ice pack, defined as the energy (J m-2) dissipated per unit area removed from the ice pack under compression, and assumed proportional to the change in potential energy caused by ridging. For Hibler-type models, this is P (= P*hexp(-C(1-A))) --> 213 213 <field id="CMIP6_siconc" field_ref="iceconc_pct" /> <!-- P1 (%) sea_ice_area_fraction : Area fraction of grid cell covered by sea ice --> … … 229 229 <field id="CMIP6_sidragbot" field_ref="dummy_XY" /> <!-- P3 (1.0) sidragbot : Oceanic drag coefficient that is used to calculate the oceanic momentum drag on sea ice --> 230 230 <field id="CMIP6_sidragtop" field_ref="dummy_XY" /> <!-- P3 (1.0) surface_drag_coefficient_for_momentum_in_air : Atmospheric drag coefficient that is used to calculate the atmospheric momentum drag on sea ice --> 231 <field id="CMIP6_siextentn" field_ref="NH_ iceextt" /> <!-- P2 (1e6 km2) sea_ice_extent : Total area of all Northern-Hemisphere grid cells that are covered by at least 15 % areal fraction of sea ice -->232 <field id="CMIP6_siextents" field_ref="SH_ iceextt" /> <!-- P2 (1e6 km2) sea_ice_extent : Total area of all Southern-Hemisphere grid cells that are covered by at least 15 % areal fraction of sea ice -->231 <field id="CMIP6_siextentn" field_ref="NH_sc_iceextt" /> <!-- P2 (1e6 km2) sea_ice_extent : Total area of all Northern-Hemisphere grid cells that are covered by at least 15 % areal fraction of sea ice --> 232 <field id="CMIP6_siextents" field_ref="SH_sc_iceextt" /> <!-- P2 (1e6 km2) sea_ice_extent : Total area of all Southern-Hemisphere grid cells that are covered by at least 15 % areal fraction of sea ice --> 233 233 <field id="CMIP6_sifb" field_ref="icefb" /> <!-- P2 (m) sea_ice_freeboard : Mean height of sea-ice surface (=snow-ice interface when snow covered) above sea level --> 234 234 <field id="CMIP6_siflcondbot" field_ref="hfxconbo" /> <!-- P2 (W m-2) siflcondbot : the net heat conduction flux at the ice base --> … … 286 286 <field id="CMIP6_siv" field_ref="vice_mv" /> <!-- P1 (m s-1) sea_ice_y_velocity : The y-velocity of ice on native model grid --> 287 287 <field id="CMIP6_sivol" field_ref="icevolu" /> <!-- P1 (m) sea_ice_thickness : Total volume of sea ice divided by grid-cell area (this used to be called ice thickness in CMIP5) --> 288 <field id="CMIP6_sivoln" field_ref="NH_ icevolu" /> <!-- P2 (1e3 km3) sea_ice_volume : total volume of sea ice in the Northern hemisphere -->289 <field id="CMIP6_sivols" field_ref="SH_ icevolu" /> <!-- P2 (1e3 km3) sea_ice_volume : total volume of sea ice in the Southern hemisphere -->288 <field id="CMIP6_sivoln" field_ref="NH_sc_icevolu" /> <!-- P2 (1e3 km3) sea_ice_volume : total volume of sea ice in the Northern hemisphere --> 289 <field id="CMIP6_sivols" field_ref="SH_sc_icevolu" /> <!-- P2 (1e3 km3) sea_ice_volume : total volume of sea ice in the Southern hemisphere --> 290 290 <field id="CMIP6_sndmassdyn" field_ref="dmsdyn" /> <!-- P2 (kg m-2 s-1) sndmassdyn : the rate of change of snow mass through advection with sea ice divided by grid-cell area --> 291 291 <field id="CMIP6_sndmassmelt" field_ref="dmsmel" /> <!-- P1 (kg m-2 s-1) surface_snow_melt_flux : the rate of change of snow mass through melt divided by grid-cell area --> … … 403 403 <field id="CMIP6_intpbp" field_ref="dummy_XY" /> <!-- P3 (mol m-2 s-1) tendency_of_ocean_mole_content_of_phosphorus_due_to_biological_production : Vertically integrated biogenic phosphorus production --> 404 404 <field id="CMIP6_intpbsi" field_ref="INTPBSI" /> <!-- P1 (mol m-2 s-1) tendency_of_ocean_mole_content_of_silicon_due_to_biological_production : Vertically integrated biogenic silica production --> 405 <field id="CMIP6_intpcalcite" field_ref=" INTPCAL" /> <!-- P1 (mol m-2 s-1) tendency_of_ocean_mole_content_of_calcite_expressed_as_carbon_due_to_biological_production : Vertically integrated calcite production -->405 <field id="CMIP6_intpcalcite" field_ref="dummy_XY" /> <!-- P1 (mol m-2 s-1) tendency_of_ocean_mole_content_of_calcite_expressed_as_carbon_due_to_biological_production : Vertically integrated calcite production --> 406 406 <field id="CMIP6_intpn2" field_ref="INTNFIX" /> <!-- P1 (mol m-2 s-1) tendency_of_ocean_mole_content_of_elemental_nitrogen_due_to_fixation : Vertically integrated nitrogen fixation --> 407 407 <field id="CMIP6_intpoc" field_ref="dummy_XY" /> <!-- P2 (kg m-2) intpoc : Vertically integrated POC --> -
CONFIG/UNIFORM/v6/IPSLESM6/GENERAL/PARAM/run.def
r3758 r3969 57 57 iflag_phytrac=_AUTO_: DEFAULT = 0 58 58 59
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