[192] | 1 | #!/bin/ksh |
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[2] | 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Sebastien Denvil, Martial Mancip |
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| 5 | # Contact: Martial.Mancip_ipsl.jussieu.fr |
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[4] | 6 | # $Date$ |
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[5] | 7 | # $Author$ |
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| 8 | # $Revision$ |
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[2] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # History: |
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| 12 | # Modification: |
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| 13 | # |
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| 14 | #************************************************************** |
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| 15 | |
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| 16 | #========================================================= |
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| 17 | # The documentation of this file can be automatically generated |
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| 18 | # if you use the prefix #D- for comments to be extracted. |
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| 19 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 20 | #========================================================= |
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| 21 | |
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| 22 | #D-#================================================== |
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| 23 | #D-LibIGCM_sys for Platine |
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| 24 | #D-#================================================== |
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| 25 | #D- |
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| 26 | #D- This ksh library if a layer under some usefull |
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| 27 | #D-environment variables and shell commands. |
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| 28 | #D-All those definitions depend on host particularities. |
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| 29 | #D-It manages a stack mechanism and test validity of operations. |
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| 30 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 31 | |
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| 32 | #==================================================== |
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| 33 | # libIGCM_sys PARAMETERS |
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| 34 | #==================================================== |
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| 35 | |
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| 36 | #==================================================== |
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| 37 | # set DEBUG_sys to true to output calls of function |
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| 38 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 39 | |
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| 40 | #==================================================== |
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| 41 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 42 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 43 | |
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| 44 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 45 | # ------------------------------------------------------------------------------------- |
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| 46 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 47 | # | | Cp/Exe param files | | Chmod | | |
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| 48 | # | | Qsub | | | | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 0 | yes | yes | yes | yes | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 1 | yes | yes | yes | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 2 | yes | yes | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | # | 3 | yes | no | no | no | |
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| 57 | # ------------------------------------------------------------------------------------- |
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| 58 | |
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| 59 | #===================================================== |
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| 60 | # Global Variables : |
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| 61 | #===================================================== |
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| 62 | # Language : "fr" or "en" |
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| 63 | typeset -r MYLANG="fr" |
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| 64 | |
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| 65 | #===================================================== |
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| 66 | # Host and user names |
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[217] | 67 | # $hostname ou hostname |
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[226] | 68 | typeset HOST=${HOST:=$( hostname )} |
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[2] | 69 | # $username ou whoami |
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[226] | 70 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[71] | 71 | # $hostname of the MASTER job |
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[187] | 72 | typeset MASTER=platine |
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[2] | 73 | |
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| 74 | #D- |
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| 75 | #D-#================================================== |
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| 76 | #D-Program used in libIGCM |
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| 77 | #D-#================================================== |
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| 78 | |
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| 79 | # rsync with path |
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[192] | 80 | typeset -r RSYNC=/usr/bin/rsync |
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[2] | 81 | # RSYNC_opt args to rsync |
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[192] | 82 | typeset -r RSYNC_opt="-va" |
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[2] | 83 | # ie storage filesystem |
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[192] | 84 | typeset -r RHOST=platine |
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[2] | 85 | |
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| 86 | #==================================================== |
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[17] | 87 | # Source Ferret |
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| 88 | . /home/cont003/p86ipsl/.atlas_env_platine_ksh |
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| 89 | |
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| 90 | #==================================================== |
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| 91 | # Specific for ocean additionnal diagnostic |
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| 92 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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| 93 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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| 94 | |
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| 95 | #==================================================== |
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[2] | 96 | # Host specific DIRECTORIES |
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| 97 | #==================================================== |
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| 98 | |
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| 99 | #==================================================== |
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| 100 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 101 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 102 | |
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| 103 | #==================================================== |
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| 104 | #- SUBMIT_DIR : submission dir |
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[44] | 105 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${PWD}} |
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[2] | 106 | |
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| 107 | #==================================================== |
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| 108 | #- ARCHIVE |
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| 109 | typeset -r ARCHIVE=${DMFDIR} |
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| 110 | |
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| 111 | #==================================================== |
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[71] | 112 | #- libIGCM_POST |
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| 113 | typeset -r libIGCM_POST=${libIGCM} |
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| 114 | |
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| 115 | #==================================================== |
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[2] | 116 | #- IN |
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| 117 | typeset -r R_IN=${R_IN:=/dmnfs/cont003/p86ipsl/IGCM} |
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| 118 | |
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| 119 | #==================================================== |
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| 120 | #- OUT |
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| 121 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 122 | |
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| 123 | #==================================================== |
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[17] | 124 | #- OUT_SCR (ONLY FOR double copy an scratch) |
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| 125 | typeset -r R_OUT_SCR=${SCRATCHDIR}/IGCM_OUT |
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| 126 | |
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| 127 | #==================================================== |
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[2] | 128 | #- OUT_POST |
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| 129 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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| 130 | |
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| 131 | #==================================================== |
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| 132 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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[17] | 133 | typeset RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}} |
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| 134 | if [ $LSB_QUEUE == post ] ; then |
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[187] | 135 | typeset -r RUN_DIR_PATH=${SCRATCHDIR}/TMPDIR_IGCM/tmp$$ |
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[24] | 136 | if [ ! -d ${RUN_DIR_PATH} ]; then |
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| 137 | \mkdir -p ${RUN_DIR_PATH} |
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| 138 | if [ $? -gt 0 ] ; then |
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| 139 | echo "Error in creation of "${RUN_DIR_PATH} |
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| 140 | fi |
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| 141 | fi |
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[17] | 142 | fi |
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[2] | 143 | |
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| 144 | #==================================================== |
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[156] | 145 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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| 146 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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| 147 | |
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| 148 | #==================================================== |
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[2] | 149 | #- HOST_MPIRUN_COMMAND |
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[24] | 150 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time srun"} |
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[2] | 151 | |
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[61] | 152 | #==================================================== |
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| 153 | #- Max number of arguments passed to nco operator or demigration command |
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| 154 | UNIX_MAX_LIMIT=360 |
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| 155 | |
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[192] | 156 | #D-#================================================== |
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[2] | 157 | #D-function IGCM_sys_RshMaster |
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| 158 | #D-* Purpose: Just a fake command to wrapp |
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| 159 | #D- IGCM_card call in post-treatment |
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[145] | 160 | #D- Ulam do not see brodie filesystem |
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| 161 | #D- Cesium do not see all mercure filesystem |
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[192] | 162 | #D- That's why we need this hack. |
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[2] | 163 | #D-* Examples: |
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| 164 | #D- |
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| 165 | function IGCM_sys_RshMaster { |
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| 166 | #set -vx |
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| 167 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 168 | /bin/ksh <<-EOF |
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| 169 | export libIGCM=${libIGCM} |
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[98] | 170 | export DEBUG_debug=${DEBUG_debug} |
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[2] | 171 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 172 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 173 | ${@} |
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| 174 | EOF |
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| 175 | if [ $? -gt 0 ] ; then |
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| 176 | echo "IGCM_sys_RshMaster : erreur." |
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| 177 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 178 | fi |
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| 179 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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| 180 | } |
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| 181 | |
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| 182 | #D-#================================================== |
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[37] | 183 | #D-function IGCM_sys_RshArchive |
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| 184 | #D-* Purpose: Archive rsh command |
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| 185 | #D-* Examples: |
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| 186 | #D- |
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| 187 | function IGCM_sys_RshArchive { |
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| 188 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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[40] | 189 | /bin/ksh <<-EOF |
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| 190 | ${@} |
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| 191 | EOF |
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[37] | 192 | if [ $? -gt 0 ] ; then |
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| 193 | echo "IGCM_sys_RshArchive : erreur." |
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| 194 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 195 | fi |
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| 196 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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| 197 | } |
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| 198 | |
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| 199 | #D-#================================================== |
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[2] | 200 | #D-function IGCM_sys_RshPost |
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[37] | 201 | #D-* Purpose: Post-process rsh command |
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[2] | 202 | #D-* Examples: |
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| 203 | #D- |
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| 204 | function IGCM_sys_RshPost { |
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| 205 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 206 | if ( $DEBUG_sys ) ; then |
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| 207 | echo "IGCM_sys_RshPost :" $@ |
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| 208 | fi |
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| 209 | /bin/ksh ${@} |
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| 210 | if [ $? -gt 0 ] ; then |
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| 211 | echo "IGCM_sys_RshPost : erreur." |
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| 212 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 213 | fi |
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| 214 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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| 215 | } |
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| 216 | |
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| 217 | #D-#================================================== |
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[153] | 218 | #D-function IGCM_sys_SendMail |
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| 219 | #D-* Purpose: Send mail when simulation is over |
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| 220 | #D-* Examples: |
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| 221 | #D- |
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| 222 | function IGCM_sys_SendMail { |
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| 223 | IGCM_debug_PushStack "IGCM_sys_SendMailPost" $@ |
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| 224 | if ( $DEBUG_sys ) ; then |
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[187] | 225 | echo "IGCM_sys_SendMail :" $@ |
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[153] | 226 | fi |
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[187] | 227 | cat << END_MAIL > job_end.mail |
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[153] | 228 | Dear ${LOGIN}, |
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| 229 | |
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| 230 | Simulation ${config_UserChoices_JobName} is finished on supercomputer `hostname`. |
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| 231 | Job started : ${DateBegin} |
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| 232 | Job ended : ${DateEnd} |
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| 233 | Ouput files are available in ${R_SAVE} |
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| 234 | END_MAIL |
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| 235 | |
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| 236 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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[187] | 237 | mailx -s "${config_UserChoices_JobName} completed" ${config_UserChoices_MailName} < job_end.mail |
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[153] | 238 | elif [ -f ~/.forward ] ; then |
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[160] | 239 | mailx -s "${config_UserChoices_JobName} completed" $( cat ~/.forward ) < job_end.mail |
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[153] | 240 | fi |
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| 241 | |
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| 242 | if [ $? -gt 0 ] ; then |
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| 243 | echo "IGCM_sys_SendMail : erreur." |
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| 244 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 245 | fi |
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| 246 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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| 247 | } |
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| 248 | |
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| 249 | #D-#================================================== |
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[2] | 250 | #D-function IGCM_sys_Mkdir |
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| 251 | #D-* Purpose: Master locale mkdir command |
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| 252 | #D-* Examples: |
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| 253 | #D- |
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| 254 | function IGCM_sys_Mkdir { |
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| 255 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 256 | if ( $DEBUG_sys ) ; then |
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| 257 | echo "IGCM_sys_Mkdir :" $@ |
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| 258 | fi |
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| 259 | if [ ! -d ${1} ]; then |
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| 260 | \mkdir -p $1 |
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| 261 | if [ $? -gt 0 ] ; then |
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| 262 | echo "IGCM_sys_Mkdir : erreur." |
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| 263 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 264 | fi |
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| 265 | fi |
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| 266 | # vérification : |
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| 267 | if [ ! -d ${1} ] ; then |
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| 268 | echo "IGCM_sys_Mkdir : erreur." |
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| 269 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 270 | fi |
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| 271 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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| 272 | } |
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| 273 | |
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| 274 | #D-#================================================== |
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| 275 | #D-function IGCM_sys_MkdirArchive |
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| 276 | #D-* Purpose: Mkdir on Archive |
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| 277 | #D-* Examples: |
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| 278 | #D- |
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| 279 | function IGCM_sys_MkdirArchive { |
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| 280 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 281 | if ( $DEBUG_sys ) ; then |
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| 282 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 283 | fi |
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| 284 | #- creation de repertoire sur le serveur fichier |
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| 285 | if [ ! -d ${1} ]; then |
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| 286 | \mkdir -p $1 |
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| 287 | if [ $? -gt 0 ] ; then |
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| 288 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 289 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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| 290 | fi |
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| 291 | fi |
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| 292 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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| 293 | } |
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| 294 | |
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| 295 | #D-#================================================== |
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| 296 | #D-function IGCM_sys_MkdirWork |
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| 297 | #D-* Purpose: Mkdir on Work |
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| 298 | #D-* Examples: |
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| 299 | #D- |
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| 300 | function IGCM_sys_MkdirWork { |
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| 301 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 302 | if ( $DEBUG_sys ) ; then |
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| 303 | echo "IGCM_sys_MkdirWork :" $@ |
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| 304 | fi |
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| 305 | #- creation de repertoire sur le serveur fichier |
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| 306 | if [ ! -d ${1} ]; then |
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| 307 | \mkdir -p $1 |
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| 308 | if [ $? -gt 0 ] ; then |
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| 309 | echo "IGCM_sys_MkdirWork : erreur." |
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| 310 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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| 311 | fi |
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| 312 | fi |
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| 313 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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| 314 | } |
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| 315 | |
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| 316 | #D-#================================================== |
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| 317 | #D-function IGCM_sys_Cd |
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| 318 | #D-* Purpose: master cd command |
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| 319 | #D-* Examples: |
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| 320 | #D- |
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| 321 | function IGCM_sys_Cd { |
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| 322 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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| 323 | if ( $DEBUG_sys ) ; then |
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| 324 | echo "IGCM_sys_Cd :" $@ |
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| 325 | fi |
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| 326 | \cd $1 |
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| 327 | if [ $? -gt 0 ] ; then |
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| 328 | echo "IGCM_sys_Cd : erreur." |
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| 329 | IGCM_debug_Exit "IGCM_sys_Cd" |
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| 330 | fi |
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| 331 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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| 332 | } |
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| 333 | |
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| 334 | #D-#================================================== |
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| 335 | #D-function IGCM_sys_Chmod |
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| 336 | #D-* Purpose: Chmod |
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| 337 | #D-* Examples: |
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| 338 | #D- |
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| 339 | function IGCM_sys_Chmod { |
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| 340 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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| 341 | if ( $DEBUG_sys ) ; then |
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| 342 | echo "IGCM_sys_Chmod :" $@ |
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| 343 | fi |
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| 344 | if [ $DRYRUN -le 1 ]; then |
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| 345 | \chmod $@ |
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| 346 | if [ $? -gt 0 ] ; then |
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| 347 | echo "IGCM_sys_Chmod : erreur." |
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| 348 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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| 349 | fi |
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| 350 | else |
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[36] | 351 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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[2] | 352 | fi |
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| 353 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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| 354 | } |
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| 355 | |
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| 356 | #D-#================================================== |
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| 357 | #D-function IGCM_sys_FileSize |
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| 358 | #D-* Purpose: Filesize |
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| 359 | #D-* Examples: |
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| 360 | #D- |
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| 361 | function IGCM_sys_FileSize { |
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| 362 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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| 363 | |
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| 364 | typeset sizeF |
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| 365 | set +A sizeF -- $( ls -la ${1} ) |
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| 366 | if [ $? -gt 0 ] ; then |
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| 367 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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| 368 | fi |
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| 369 | eval ${2}=${sizeF[4]} |
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| 370 | |
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| 371 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
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| 372 | } |
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| 373 | |
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| 374 | #D-#================================================== |
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| 375 | #D-function IGCM_sys_TestDir |
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| 376 | #D-* Purpose: Test Directory that must exists |
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| 377 | #D-* Examples: |
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| 378 | #D- |
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| 379 | function IGCM_sys_TestDir { |
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| 380 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
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| 381 | if ( $DEBUG_sys ) ; then |
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| 382 | echo "IGCM_sys_TestDir :" $@ |
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| 383 | fi |
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[67] | 384 | typeset ExistFlag |
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| 385 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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[2] | 386 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
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[67] | 387 | |
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| 388 | return ${ExistFlag} |
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[2] | 389 | } |
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| 390 | |
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| 391 | #D-#================================================== |
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| 392 | #D-function IGCM_sys_TestDirArchive |
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| 393 | #D-* Purpose: Test Directory that must exists on Archive |
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| 394 | #D-* Examples: |
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| 395 | #D- |
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| 396 | function IGCM_sys_TestDirArchive { |
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| 397 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
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| 398 | if ( $DEBUG_sys ) ; then |
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| 399 | echo "IGCM_sys_TestDirArchive :" $@ |
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| 400 | fi |
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[67] | 401 | typeset ExistFlag |
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| 402 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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[2] | 403 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
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[67] | 404 | |
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| 405 | return ${ExistFlag} |
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[2] | 406 | } |
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| 407 | |
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| 408 | #D-#================================================== |
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| 409 | #D-function IGCM_sys_TestFileArchive |
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| 410 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
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| 411 | #D-* Examples: |
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| 412 | #D- |
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| 413 | function IGCM_sys_TestFileArchive { |
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| 414 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
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[67] | 415 | typeset ExistFlag |
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| 416 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
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| 417 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
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| 418 | |
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| 419 | return ${ExistFlag} |
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| 420 | } |
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| 421 | |
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| 422 | #D-#================================================== |
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| 423 | #D-function IGCM_sys_CountFileArchive |
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| 424 | #D-* Purpose: Count files on Archive filesystem |
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| 425 | #D-* Examples: |
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| 426 | #D- |
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| 427 | function IGCM_sys_CountFileArchive { |
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| 428 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
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| 429 | ls ${@} 2>/dev/null | wc -l |
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| 430 | if [ $? -gt 0 ] ; then |
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| 431 | echo "IGCM_sys_CountFileArchive : erreur." |
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[2] | 432 | fi |
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[67] | 433 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
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[2] | 434 | } |
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| 435 | |
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| 436 | #D-#================================================== |
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| 437 | #D-function IGCM_sys_Tree |
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| 438 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
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| 439 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
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| 440 | #D- |
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| 441 | function IGCM_sys_Tree { |
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| 442 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
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| 443 | if ( $DEBUG_sys ) ; then |
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| 444 | echo "IGCM_sys_Tree :" $@ |
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| 445 | fi |
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| 446 | |
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[17] | 447 | \tree -f $@ |
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[2] | 448 | |
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| 449 | IGCM_debug_PopStack "IGCM_sys_Tree" |
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| 450 | } |
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| 451 | |
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| 452 | #D-#================================================== |
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| 453 | #D-function IGCM_sys_Tar |
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| 454 | #D-* Purpose: master un-tar command |
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| 455 | #D-* Examples: |
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| 456 | #D- |
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| 457 | function IGCM_sys_Tar { |
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| 458 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
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| 459 | if ( $DEBUG_sys ) ; then |
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| 460 | echo "IGCM_sys_Tar :" $@ |
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| 461 | fi |
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[17] | 462 | \tar cvf $@ |
---|
[2] | 463 | if [ $? -gt 0 ] ; then |
---|
| 464 | echo "IGCM_sys_Tar : erreur." |
---|
| 465 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 466 | fi |
---|
[17] | 467 | \tar tvf $1 |
---|
| 468 | |
---|
[2] | 469 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
| 470 | } |
---|
| 471 | |
---|
| 472 | #D-#================================================== |
---|
| 473 | #D-function IGCM_sys_UnTar |
---|
| 474 | #D-* Purpose: master un-tar command |
---|
| 475 | #D-* Examples: |
---|
| 476 | #D- |
---|
| 477 | function IGCM_sys_UnTar { |
---|
| 478 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 479 | if ( $DEBUG_sys ) ; then |
---|
| 480 | echo "IGCM_sys_UnTar :" $@ |
---|
| 481 | fi |
---|
| 482 | \tar xvf $1 |
---|
| 483 | if [ $? -gt 0 ] ; then |
---|
| 484 | echo "IGCM_sys_UnTar : erreur." |
---|
| 485 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 486 | fi |
---|
| 487 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
| 488 | } |
---|
| 489 | |
---|
| 490 | #D-#================================================== |
---|
| 491 | #D-function IGCM_sys_Qsub |
---|
| 492 | #D-* Purpose: Qsub new job |
---|
| 493 | #D-* Examples: |
---|
| 494 | #D- |
---|
| 495 | function IGCM_sys_Qsub { |
---|
| 496 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
| 497 | if ( $DEBUG_sys ) ; then |
---|
| 498 | echo "IGCM_sys_Qsub :" $@ |
---|
| 499 | fi |
---|
| 500 | bsub -o ${Script_Output} -J ${config_UserChoices_JobName}.${CumulPeriod} < $1 |
---|
| 501 | if [ $? -gt 0 ] ; then |
---|
| 502 | echo "IGCM_sys_Qsub : erreur " $@ |
---|
| 503 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 504 | fi |
---|
| 505 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
| 506 | } |
---|
| 507 | |
---|
| 508 | #D-#================================================== |
---|
| 509 | #D-function IGCM_sys_QsubPost |
---|
| 510 | #D-* Purpose: Qsub new job on scalaire |
---|
| 511 | #D-* Examples: |
---|
| 512 | #D- |
---|
| 513 | function IGCM_sys_QsubPost { |
---|
| 514 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 515 | if ( $DEBUG_sys ) ; then |
---|
| 516 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 517 | fi |
---|
| 518 | bsub -o ${POST_DIR}/$1.${PeriodDateEnd}.out < ${libIGCM_POST}/$1.job |
---|
| 519 | if [ $? -gt 0 ] ; then |
---|
| 520 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 521 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 522 | fi |
---|
| 523 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
| 524 | } |
---|
| 525 | |
---|
| 526 | #D-************************* |
---|
| 527 | #D- File transfer functions |
---|
| 528 | #D-************************* |
---|
| 529 | #D- |
---|
| 530 | |
---|
| 531 | #D-#================================================== |
---|
| 532 | #D-function IGCM_sys_Rsync_out |
---|
| 533 | #D-* Purpose: treat return val of rsync |
---|
| 534 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 535 | #D- Error values and explanations can depend on your system version. |
---|
| 536 | function IGCM_sys_Rsync_out { |
---|
| 537 | RET=$1 |
---|
| 538 | if [ ! $RET ] ; then |
---|
| 539 | echo "rsync error !" |
---|
| 540 | fi |
---|
| 541 | |
---|
| 542 | if [ $MYLANG = "fr" ]; then |
---|
| 543 | case $RET in |
---|
| 544 | 0) return ;; |
---|
| 545 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 546 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 547 | return;; |
---|
| 548 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 549 | echo "Incompatibilité de protocole." |
---|
| 550 | return;; |
---|
| 551 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 552 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 553 | echo "répertoires" |
---|
| 554 | return;; |
---|
| 555 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 556 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 557 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 558 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 559 | echo "pas par le serveur a été spécifiée." |
---|
| 560 | return;; |
---|
| 561 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 562 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 563 | return;; |
---|
| 564 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 565 | echo "Erreur d'entrée sortie fichier" |
---|
| 566 | return;; |
---|
| 567 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 568 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 569 | return;; |
---|
| 570 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 571 | echo "Erreur avec les diagnostics du programme" |
---|
| 572 | return;; |
---|
| 573 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 574 | echo "Erreur dans le code IPC" |
---|
| 575 | return;; |
---|
| 576 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 577 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 578 | return;; |
---|
| 579 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 580 | echo "Une erreur retournée par waitpid()" |
---|
| 581 | return;; |
---|
| 582 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 583 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 584 | return;; |
---|
| 585 | 23) echo "" |
---|
| 586 | echo "Erreur fichier inexistant" |
---|
| 587 | return;; |
---|
| 588 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 589 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 590 | return;; |
---|
| 591 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
| 592 | return;; |
---|
| 593 | esac |
---|
| 594 | elif [ $MYLANG = "en" ] ; then |
---|
| 595 | case $RET in |
---|
| 596 | 0) return;; |
---|
| 597 | 1) echo "rsync error : Syntax or usage error " |
---|
| 598 | return;; |
---|
| 599 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 600 | return;; |
---|
| 601 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 602 | return;; |
---|
| 603 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 604 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 605 | echo "them; or an option was specified that is supported by the client and" |
---|
| 606 | echo "not by the server." |
---|
| 607 | return;; |
---|
| 608 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 609 | return;; |
---|
| 610 | 10) echo "rsync error : Error in socket I/O " |
---|
| 611 | return;; |
---|
| 612 | 11) echo "rsync error : Error in file I/O " |
---|
| 613 | return;; |
---|
| 614 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 615 | return;; |
---|
| 616 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 617 | return;; |
---|
| 618 | 14) echo "rsync error : Error in IPC code " |
---|
| 619 | return;; |
---|
| 620 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 621 | return;; |
---|
| 622 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 623 | return;; |
---|
| 624 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 625 | return;; |
---|
| 626 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 627 | return;; |
---|
| 628 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 629 | return;; |
---|
| 630 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 631 | return;; |
---|
| 632 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
| 633 | return;; |
---|
| 634 | esac |
---|
| 635 | else |
---|
| 636 | echo "unknown language $MYLANG." |
---|
| 637 | return |
---|
| 638 | fi |
---|
| 639 | } |
---|
| 640 | |
---|
| 641 | #D-#================================================== |
---|
| 642 | #D-function IGCM_sys_Cp |
---|
| 643 | #D-* Purpose: generic cp |
---|
| 644 | #D-* Examples: |
---|
| 645 | #D- |
---|
| 646 | function IGCM_sys_Cp { |
---|
| 647 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 648 | if ( $DEBUG_sys ) ; then |
---|
| 649 | echo "IGCM_sys_Cp :" $@ |
---|
| 650 | fi |
---|
| 651 | |
---|
| 652 | typeset RET |
---|
| 653 | |
---|
| 654 | echo cp $@ > out_rsync 2>&1 |
---|
| 655 | \cp $@ >> out_rsync 2>&1 |
---|
| 656 | RET=$? |
---|
| 657 | |
---|
| 658 | if [ ${RET} -gt 0 ] ; then |
---|
| 659 | echo "IGCM_sys_Cp : error." |
---|
| 660 | cat out_rsync |
---|
| 661 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 662 | fi |
---|
| 663 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
| 664 | } |
---|
| 665 | |
---|
| 666 | #D-#================================================== |
---|
| 667 | #D-function IGCM_sys_Rm |
---|
| 668 | #D-* Purpose: generic rm |
---|
| 669 | #D-* Examples: |
---|
| 670 | #D- |
---|
| 671 | function IGCM_sys_Rm { |
---|
| 672 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 673 | if ( $DEBUG_sys ) ; then |
---|
[192] | 674 | echo "IGCM_sys_Rm :" $@ |
---|
[92] | 675 | fi |
---|
| 676 | |
---|
| 677 | typeset RET |
---|
| 678 | |
---|
| 679 | echo rm $@ > out_rsync 2>&1 |
---|
| 680 | \rm $@ >> out_rsync 2>&1 |
---|
| 681 | RET=$? |
---|
| 682 | |
---|
| 683 | if [ ${RET} -gt 0 ] ; then |
---|
[2] | 684 | echo "IGCM_sys_Rm : error." |
---|
| 685 | cat out_rsync |
---|
| 686 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 687 | fi |
---|
| 688 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
| 689 | } |
---|
| 690 | |
---|
| 691 | #D-#================================================== |
---|
[203] | 692 | #D-function IGCM_sys_RmRunDir |
---|
| 693 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 694 | #D- scheduler will do the job) |
---|
| 695 | #D-* Examples: |
---|
| 696 | #D- |
---|
| 697 | function IGCM_sys_RmRunDir { |
---|
| 698 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 699 | if ( $DEBUG_sys ) ; then |
---|
| 700 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 701 | echo "Dummy call, let the scheduler do that." |
---|
| 702 | fi |
---|
| 703 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
| 704 | } |
---|
| 705 | |
---|
| 706 | #D-#================================================== |
---|
[2] | 707 | #D-function IGCM_sys_Mv |
---|
| 708 | #D-* Purpose: generic move |
---|
| 709 | #D-* Examples: |
---|
| 710 | #D- |
---|
| 711 | function IGCM_sys_Mv { |
---|
| 712 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 713 | if ( $DEBUG_sys ) ; then |
---|
| 714 | echo "IGCM_sys_Mv :" $@ |
---|
| 715 | fi |
---|
| 716 | |
---|
[173] | 717 | if [ $DRYRUN = 0 ]; then |
---|
[2] | 718 | |
---|
[173] | 719 | typeset RET |
---|
| 720 | |
---|
| 721 | echo mv $@ > out_rsync 2>&1 |
---|
| 722 | \mv $@ >> out_rsync 2>&1 |
---|
| 723 | RET=$? |
---|
| 724 | |
---|
| 725 | if [ ${RET} -gt 0 ] ; then |
---|
| 726 | echo "IGCM_sys_Mv : error in mv." |
---|
| 727 | cat out_rsync |
---|
| 728 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
| 729 | fi |
---|
| 730 | else |
---|
| 731 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[2] | 732 | fi |
---|
| 733 | |
---|
| 734 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
| 735 | } |
---|
| 736 | |
---|
| 737 | #D-#================================================== |
---|
[17] | 738 | #D-function IGCM_sys_Put_Dir |
---|
| 739 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 740 | #D-* Examples: |
---|
| 741 | #D- |
---|
| 742 | function IGCM_sys_Put_Dir { |
---|
| 743 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 744 | if ( $DEBUG_sys ) ; then |
---|
| 745 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 746 | fi |
---|
| 747 | if [ $DRYRUN = 0 ]; then |
---|
| 748 | if [ ! -d ${1} ] ; then |
---|
| 749 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 750 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 751 | return |
---|
| 752 | fi |
---|
[2] | 753 | |
---|
[17] | 754 | typeset RET |
---|
| 755 | |
---|
| 756 | # Only if we use rsync |
---|
| 757 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 758 | # |
---|
| 759 | #USUAL WAY |
---|
| 760 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 761 | RET=$? |
---|
| 762 | |
---|
| 763 | if [ ${RET} -gt 0 ] ; then |
---|
| 764 | echo "IGCM_sys_Put_Dir : error." |
---|
| 765 | cat out_rsync |
---|
| 766 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
| 767 | fi |
---|
| 768 | else |
---|
[36] | 769 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[17] | 770 | fi |
---|
| 771 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 772 | } |
---|
| 773 | |
---|
[2] | 774 | #D-#================================================== |
---|
[17] | 775 | #D-function IGCM_sys_Get_Dir |
---|
| 776 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
| 777 | #D-* Examples: |
---|
| 778 | #D- |
---|
| 779 | function IGCM_sys_Get_Dir { |
---|
| 780 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 781 | if ( $DEBUG_sys ) ; then |
---|
| 782 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 783 | fi |
---|
| 784 | if [ $DRYRUN = 0 ]; then |
---|
[192] | 785 | # if [ ! -d ${1} ] ; then |
---|
| 786 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 787 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 788 | # return |
---|
| 789 | # fi |
---|
[17] | 790 | |
---|
| 791 | typeset RET |
---|
| 792 | |
---|
| 793 | # Only if we use rsync |
---|
| 794 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 795 | # |
---|
| 796 | #USUAL WAY |
---|
| 797 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 798 | RET=$? |
---|
| 799 | |
---|
| 800 | if [ ${RET} -gt 0 ] ; then |
---|
| 801 | echo "IGCM_sys_Get_Dir : error." |
---|
| 802 | cat out_rsync |
---|
| 803 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
| 804 | fi |
---|
| 805 | else |
---|
[36] | 806 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[17] | 807 | fi |
---|
| 808 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 809 | } |
---|
| 810 | |
---|
| 811 | #D-#================================================== |
---|
| 812 | #D-function IGCM_sys_Get_Master |
---|
| 813 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 814 | #D-* Examples: |
---|
| 815 | #D- |
---|
| 816 | function IGCM_sys_Get_Master { |
---|
| 817 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 818 | if ( $DEBUG_sys ) ; then |
---|
| 819 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 820 | fi |
---|
| 821 | if [ $DRYRUN = 0 ]; then |
---|
| 822 | if [ ! -d ${1} ] ; then |
---|
| 823 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
| 824 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 825 | return |
---|
| 826 | fi |
---|
| 827 | |
---|
| 828 | typeset RET |
---|
[39] | 829 | sleep 60 |
---|
[17] | 830 | |
---|
| 831 | #USUAL WAY |
---|
| 832 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 833 | RET=$? |
---|
| 834 | |
---|
| 835 | if [ ${RET} -gt 0 ] ; then |
---|
| 836 | echo "IGCM_sys_Get_Master : error." |
---|
| 837 | cat out_rsync |
---|
| 838 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
| 839 | fi |
---|
| 840 | else |
---|
[36] | 841 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[17] | 842 | fi |
---|
| 843 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 844 | } |
---|
| 845 | |
---|
| 846 | #D-#================================================== |
---|
[192] | 847 | #D-function IGCM_sys_Put_Rest |
---|
| 848 | #D-* Purpose: Put computied restarts on $(ARCHIVE). |
---|
| 849 | #D- File and target directory must exist. |
---|
| 850 | #D-* Examples: |
---|
| 851 | #D- |
---|
| 852 | function IGCM_sys_Put_Rest { |
---|
| 853 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 854 | if ( $DEBUG_sys ) ; then |
---|
| 855 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 856 | fi |
---|
| 857 | if [ $DRYRUN = 0 ]; then |
---|
| 858 | if [ ! -f ${1} ] ; then |
---|
| 859 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 860 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
| 861 | fi |
---|
| 862 | |
---|
| 863 | typeset RET |
---|
| 864 | # |
---|
| 865 | if [ X${JobType} = XRUN ] ; then |
---|
| 866 | IGCM_sys_Chmod 444 ${1} |
---|
| 867 | fi |
---|
| 868 | # |
---|
| 869 | IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 870 | # |
---|
| 871 | # USUAL WAY |
---|
| 872 | putfer $1 $2 > out_rsync 2>&1 |
---|
| 873 | RET=$? |
---|
| 874 | |
---|
| 875 | # #RSYNC WITH NETWORK RSH CALL |
---|
| 876 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
| 877 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
| 878 | |
---|
| 879 | # #RSYNC WITH NFS USE |
---|
| 880 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 881 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
| 882 | |
---|
| 883 | # RET=$? |
---|
| 884 | # IGCM_sys_Rsync_out $RET |
---|
| 885 | |
---|
| 886 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 887 | # (( RET=RET+$? )) |
---|
| 888 | |
---|
| 889 | if [ ${RET} -gt 0 ] ; then |
---|
| 890 | echo "IGCM_sys_Put_Rest : error." |
---|
| 891 | cat out_rsync |
---|
| 892 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
| 893 | fi |
---|
| 894 | else |
---|
| 895 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 896 | fi |
---|
| 897 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
| 898 | } |
---|
| 899 | |
---|
| 900 | #D-#================================================== |
---|
[2] | 901 | #D-function IGCM_sys_Put_Out |
---|
| 902 | #D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly |
---|
| 903 | #D-* Examples: |
---|
| 904 | #D- |
---|
| 905 | function IGCM_sys_Put_Out { |
---|
| 906 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 907 | if ( $DEBUG_sys ) ; then |
---|
| 908 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 909 | fi |
---|
| 910 | if [ $DRYRUN = 0 ]; then |
---|
| 911 | if [ ! -f ${1} ] ; then |
---|
| 912 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 913 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 914 | return 1 |
---|
| 915 | fi |
---|
| 916 | # |
---|
| 917 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 918 | # |
---|
| 919 | typeset RET |
---|
[17] | 920 | # |
---|
[128] | 921 | if [ X${JobType} = XRUN ] ; then |
---|
[226] | 922 | if [ X${3} = X ] ; then |
---|
| 923 | IGCM_sys_Chmod 444 ${1} |
---|
| 924 | fi |
---|
[128] | 925 | fi |
---|
[2] | 926 | # |
---|
| 927 | # USUAL WAY |
---|
| 928 | putfer $1 $2 > out_rsync 2>&1 |
---|
| 929 | RET=$? |
---|
| 930 | |
---|
| 931 | # #RSYNC WITH NETWORK RSH CALL |
---|
[192] | 932 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
| 933 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
[2] | 934 | |
---|
| 935 | # #RSYNC WITH NFS USE |
---|
[192] | 936 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 937 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[2] | 938 | |
---|
| 939 | # RET=$? |
---|
| 940 | # IGCM_sys_Rsync_out $RET |
---|
| 941 | |
---|
| 942 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 943 | # (( RET=RET+$? )) |
---|
| 944 | |
---|
| 945 | if [ ${RET} -gt 0 ] ; then |
---|
| 946 | echo "IGCM_sys_Put_Out : error." |
---|
| 947 | cat out_rsync |
---|
| 948 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
| 949 | fi |
---|
| 950 | else |
---|
[36] | 951 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[2] | 952 | fi |
---|
| 953 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 954 | return 0 |
---|
| 955 | } |
---|
| 956 | |
---|
| 957 | #D-#================================================== |
---|
| 958 | #D-function IGCM_sys_Get |
---|
| 959 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 960 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 961 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 962 | function IGCM_sys_Get { |
---|
| 963 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
| 964 | |
---|
| 965 | typeset DEST RET dm_liste ifile target file_work |
---|
| 966 | |
---|
| 967 | if ( $DEBUG_sys ) ; then |
---|
| 968 | echo "IGCM_sys_Get :" $@ |
---|
| 969 | fi |
---|
| 970 | if [ $DRYRUN -le 2 ]; then |
---|
| 971 | if [ X${1} = X'/l' ] ; then |
---|
| 972 | # test if the first file is present in the old computation : |
---|
| 973 | eval set +A dm_liste \${${2}} |
---|
| 974 | else |
---|
| 975 | eval set +A dm_liste ${1} |
---|
| 976 | fi |
---|
| 977 | eval DEST=\${${#}} |
---|
| 978 | |
---|
| 979 | #===================================================== |
---|
| 980 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 981 | #===================================================== |
---|
| 982 | |
---|
| 983 | # Is it an R_OUT file (not R_IN) ? |
---|
| 984 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 985 | #if [ $? -eq 0 ] ; then |
---|
| 986 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
[17] | 987 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_OUT_SCR}|g" ) |
---|
[2] | 988 | # if [ -f ${file_work[0]} ] ; then |
---|
| 989 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
| 990 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 991 | # return |
---|
| 992 | # fi |
---|
| 993 | #fi |
---|
| 994 | |
---|
| 995 | # test if the (first) file is present in the old computation : |
---|
| 996 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
| 997 | RET=$? |
---|
| 998 | if [ ${RET} -gt 0 ] ; then |
---|
| 999 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 1000 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
[145] | 1001 | #IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1002 | #return |
---|
[2] | 1003 | fi |
---|
| 1004 | |
---|
[222] | 1005 | # dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1006 | # RET=$? |
---|
| 1007 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1008 | # echo "IGCM_sys_Get : demigration error." |
---|
| 1009 | # cat out_rsync |
---|
| 1010 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1011 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1012 | # return |
---|
| 1013 | # fi |
---|
[2] | 1014 | |
---|
| 1015 | #USUAL WAY |
---|
[17] | 1016 | (( RET=0 )) |
---|
[2] | 1017 | if [ X${1} = X'/l' ] ; then |
---|
| 1018 | (( RET=0 )) |
---|
| 1019 | for target in ${dm_liste[*]} ; do |
---|
| 1020 | local_file=$( basename ${target} ) |
---|
| 1021 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1022 | (( RET = RET + $? )) |
---|
| 1023 | done |
---|
| 1024 | else |
---|
| 1025 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1026 | RET=$? |
---|
| 1027 | fi |
---|
| 1028 | |
---|
| 1029 | # #RSYNC WITH NETWORK RSH CALL |
---|
[192] | 1030 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1031 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[2] | 1032 | |
---|
| 1033 | # #RSYNC WITH NFS USE |
---|
[192] | 1034 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1035 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[2] | 1036 | |
---|
| 1037 | # RET=$? |
---|
| 1038 | # IGCM_sys_Rsync_out $RET |
---|
| 1039 | |
---|
| 1040 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1041 | # (( RET=RET+$? )) |
---|
| 1042 | |
---|
| 1043 | if [ ${RET} -gt 0 ] ; then |
---|
| 1044 | echo "IGCM_sys_Get : copy error." |
---|
| 1045 | cat out_rsync |
---|
| 1046 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1047 | fi |
---|
| 1048 | else |
---|
[36] | 1049 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[2] | 1050 | fi |
---|
| 1051 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1052 | } |
---|
| 1053 | |
---|
| 1054 | #D-#================================================== |
---|
| 1055 | #D-function IGCM_sys_Put_Dods |
---|
| 1056 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1057 | #D-* Examples: |
---|
| 1058 | #D- |
---|
| 1059 | function IGCM_sys_Put_Dods { |
---|
| 1060 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 1061 | if ( $DEBUG_sys ) ; then |
---|
| 1062 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 1063 | fi |
---|
| 1064 | if [ $DRYRUN = 0 ]; then |
---|
[17] | 1065 | if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1066 | echo "WARNING : IGCM_sys_Put_Dods ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
[2] | 1067 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1068 | return |
---|
| 1069 | fi |
---|
| 1070 | |
---|
| 1071 | typeset RET |
---|
| 1072 | # |
---|
[17] | 1073 | cd ${R_SAVE} |
---|
[263] | 1074 | dods_rm public/${LOGIN}/${R_DODS}/${1} > /dev/null 2>&1 |
---|
| 1075 | dods_cp ${1} public/${LOGIN}/${R_DODS} > /dev/null 2>&1 |
---|
[17] | 1076 | RET=0 |
---|
[2] | 1077 | |
---|
| 1078 | if [ ${RET} -gt 0 ] ; then |
---|
| 1079 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1080 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
| 1081 | fi |
---|
| 1082 | else |
---|
[36] | 1083 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
[2] | 1084 | fi |
---|
| 1085 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1086 | } |
---|
| 1087 | |
---|
| 1088 | ############################################################## A FINIR !! |
---|
| 1089 | |
---|
| 1090 | #D-#================================================== |
---|
| 1091 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1092 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1093 | #D-* Examples: |
---|
| 1094 | #D- |
---|
| 1095 | function IGCM_sys_GetDate_FichWork { |
---|
| 1096 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1097 | if ( $DEBUG_sys ) ; then |
---|
| 1098 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1099 | fi |
---|
| 1100 | # donne la date filesys d'un fichier sur la machine work |
---|
| 1101 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
| 1102 | } |
---|
| 1103 | |
---|
| 1104 | #D-#================================================== |
---|
| 1105 | #D-function IGCM_sys_GetDate_FichArchive |
---|
[17] | 1106 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
[2] | 1107 | #D-* Examples: |
---|
| 1108 | #D- |
---|
| 1109 | function IGCM_sys_GetDate_FichArchive { |
---|
| 1110 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1111 | if ( $DEBUG_sys ) ; then |
---|
| 1112 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1113 | fi |
---|
| 1114 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1115 | } |
---|
| 1116 | |
---|
| 1117 | ############################################################## |
---|
| 1118 | # NCO OPERATOR |
---|
| 1119 | |
---|
| 1120 | function IGCM_sys_ncap { |
---|
| 1121 | IGCM_debug_PushStack "IGCM_sys_ncap" -- $@ |
---|
| 1122 | if ( $DEBUG_sys ) ; then |
---|
| 1123 | echo "IGCM_sys_ncap :" $@ |
---|
| 1124 | fi |
---|
| 1125 | /applications/nco/bin/ncap $@ |
---|
| 1126 | if [ $? -gt 0 ] ; then |
---|
| 1127 | echo "IGCM_sys_ncap : erreur ${@}." |
---|
| 1128 | # IGCM_debug_Exit "ncap" |
---|
| 1129 | fi |
---|
| 1130 | |
---|
| 1131 | IGCM_debug_PopStack "IGCM_sys_ncap" |
---|
| 1132 | } |
---|
| 1133 | |
---|
| 1134 | ncatted=/applications/nco/bin/ncatted |
---|
| 1135 | # Problem with ksh and string passed in this function to ncatted ! |
---|
| 1136 | # function IGCM_sys_ncatted { |
---|
| 1137 | # IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 1138 | # if ( $DEBUG_sys ) ; then |
---|
| 1139 | # echo "IGCM_sys_ncatted :" $@ |
---|
| 1140 | # fi |
---|
| 1141 | # /usr/local/bin/ncatted $@ |
---|
| 1142 | # if [ $? -gt 0 ] ; then |
---|
| 1143 | # echo "IGCM_sys_ncatted : erreur ${@}." |
---|
| 1144 | # IGCM_debug_Exit "ncatted" |
---|
| 1145 | # fi |
---|
| 1146 | |
---|
| 1147 | # IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
| 1148 | # } |
---|
| 1149 | |
---|
| 1150 | function IGCM_sys_ncbo { |
---|
| 1151 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 1152 | if ( $DEBUG_sys ) ; then |
---|
| 1153 | echo "IGCM_sys_ncbo :" $@ |
---|
| 1154 | fi |
---|
| 1155 | /applications/nco/bin/ncbo $@ |
---|
| 1156 | if [ $? -gt 0 ] ; then |
---|
| 1157 | echo "IGCM_sys_ncbo : erreur ${@}." |
---|
| 1158 | # IGCM_debug_Exit "ncbo" |
---|
| 1159 | fi |
---|
| 1160 | |
---|
| 1161 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
| 1162 | } |
---|
| 1163 | |
---|
| 1164 | function IGCM_sys_ncdiff { |
---|
| 1165 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 1166 | if ( $DEBUG_sys ) ; then |
---|
| 1167 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 1168 | fi |
---|
| 1169 | /applications/nco/bin/ncdiff $@ |
---|
| 1170 | if [ $? -gt 0 ] ; then |
---|
| 1171 | echo "IGCM_sys_ncdiff : erreur ${@}." |
---|
| 1172 | # IGCM_debug_Exit "ncdiff" |
---|
| 1173 | fi |
---|
| 1174 | |
---|
| 1175 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
| 1176 | } |
---|
| 1177 | |
---|
| 1178 | function IGCM_sys_ncea { |
---|
| 1179 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 1180 | if ( $DEBUG_sys ) ; then |
---|
| 1181 | echo "IGCM_sys_ncea :" $@ |
---|
| 1182 | fi |
---|
| 1183 | /applications/nco/bin/ncea $@ |
---|
| 1184 | if [ $? -gt 0 ] ; then |
---|
| 1185 | echo "IGCM_sys_ncea : erreur ${@}." |
---|
| 1186 | # IGCM_debug_Exit "ncea" |
---|
| 1187 | fi |
---|
| 1188 | |
---|
| 1189 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
| 1190 | } |
---|
| 1191 | |
---|
| 1192 | function IGCM_sys_ncecat { |
---|
| 1193 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 1194 | if ( $DEBUG_sys ) ; then |
---|
| 1195 | echo "IGCM_sys_ncecat :" $@ |
---|
| 1196 | fi |
---|
| 1197 | /applications/nco/bin/ncecat $@ |
---|
| 1198 | if [ $? -gt 0 ] ; then |
---|
| 1199 | echo "IGCM_sys_ncecat : erreur ${@}." |
---|
| 1200 | # IGCM_debug_Exit "ncecat" |
---|
| 1201 | fi |
---|
| 1202 | |
---|
| 1203 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
| 1204 | } |
---|
| 1205 | |
---|
| 1206 | function IGCM_sys_ncflint { |
---|
| 1207 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 1208 | if ( $DEBUG_sys ) ; then |
---|
| 1209 | echo "IGCM_sys_ncflint :" $@ |
---|
| 1210 | fi |
---|
| 1211 | /usr/local/bin/ncflint $@ |
---|
| 1212 | if [ $? -gt 0 ] ; then |
---|
| 1213 | echo "IGCM_sys_ncflint : erreur ${@}." |
---|
| 1214 | # IGCM_debug_Exit "ncflint" |
---|
| 1215 | fi |
---|
| 1216 | |
---|
| 1217 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
| 1218 | } |
---|
| 1219 | |
---|
| 1220 | function IGCM_sys_ncks { |
---|
| 1221 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 1222 | if ( $DEBUG_sys ) ; then |
---|
| 1223 | echo "IGCM_sys_ncks :" $@ |
---|
| 1224 | fi |
---|
| 1225 | /applications/nco/bin/ncks $@ |
---|
| 1226 | if [ $? -gt 0 ] ; then |
---|
| 1227 | echo "IGCM_sys_ncks : erreur ${@}." |
---|
| 1228 | # IGCM_debug_Exit "ncks" |
---|
| 1229 | fi |
---|
| 1230 | |
---|
| 1231 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
| 1232 | } |
---|
| 1233 | |
---|
| 1234 | function IGCM_sys_ncpdq { |
---|
| 1235 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 1236 | if ( $DEBUG_sys ) ; then |
---|
| 1237 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 1238 | fi |
---|
| 1239 | /applications/nco/bin/ncpdq $@ |
---|
| 1240 | if [ $? -gt 0 ] ; then |
---|
| 1241 | echo "IGCM_sys_ncpdq : erreur ${@}." |
---|
| 1242 | # IGCM_debug_Exit "ncpdq" |
---|
| 1243 | fi |
---|
| 1244 | |
---|
| 1245 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
| 1246 | } |
---|
| 1247 | |
---|
| 1248 | function IGCM_sys_ncra { |
---|
| 1249 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 1250 | if ( $DEBUG_sys ) ; then |
---|
| 1251 | echo "IGCM_sys_ncra :" $@ |
---|
| 1252 | fi |
---|
[17] | 1253 | /applications/nco/bin/ncra $@ |
---|
[2] | 1254 | if [ $? -gt 0 ] ; then |
---|
| 1255 | echo "IGCM_sys_ncra : erreur ${@}." |
---|
| 1256 | # IGCM_debug_Exit "ncra" |
---|
| 1257 | fi |
---|
| 1258 | |
---|
| 1259 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
| 1260 | } |
---|
| 1261 | |
---|
| 1262 | function IGCM_sys_ncrcat { |
---|
| 1263 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 1264 | if ( $DEBUG_sys ) ; then |
---|
| 1265 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 1266 | fi |
---|
| 1267 | /applications/nco/bin/ncrcat $@ |
---|
| 1268 | if [ $? -gt 0 ] ; then |
---|
| 1269 | echo "IGCM_sys_ncrcat : erreur ${@}." |
---|
| 1270 | # IGCM_debug_Exit "ncrcat" |
---|
| 1271 | fi |
---|
| 1272 | |
---|
| 1273 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
| 1274 | } |
---|
| 1275 | |
---|
| 1276 | function IGCM_sys_ncrename { |
---|
| 1277 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 1278 | if ( $DEBUG_sys ) ; then |
---|
| 1279 | echo "IGCM_sys_ncrename :" $@ |
---|
| 1280 | fi |
---|
| 1281 | /applications/nco/bin/ncrename $@ |
---|
| 1282 | if [ $? -gt 0 ] ; then |
---|
| 1283 | echo "IGCM_sys_ncrename : erreur ${@}." |
---|
| 1284 | # IGCM_debug_Exit "ncrename" |
---|
| 1285 | fi |
---|
| 1286 | |
---|
| 1287 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
| 1288 | } |
---|
| 1289 | |
---|
| 1290 | function IGCM_sys_ncwa { |
---|
| 1291 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 1292 | if ( $DEBUG_sys ) ; then |
---|
| 1293 | echo "IGCM_sys_ncwa :" $@ |
---|
| 1294 | fi |
---|
| 1295 | /applications/nco/bin/ncwa $@ |
---|
| 1296 | if [ $? -gt 0 ] ; then |
---|
| 1297 | echo "IGCM_sys_ncwa : erreur ${@}." |
---|
| 1298 | # IGCM_debug_Exit "ncwa" |
---|
| 1299 | fi |
---|
| 1300 | |
---|
| 1301 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
| 1302 | } |
---|
| 1303 | |
---|
| 1304 | ############################################################## |
---|
| 1305 | # REBUILD OPERATOR |
---|
| 1306 | |
---|
| 1307 | function IGCM_sys_rebuild { |
---|
| 1308 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1309 | if ( $DEBUG_sys ) ; then |
---|
| 1310 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1311 | fi |
---|
[24] | 1312 | /home/cont003/p86ipsl/IA64/bin/rebuild -f -o $@ |
---|
[2] | 1313 | if [ $? -gt 0 ] ; then |
---|
| 1314 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1315 | IGCM_debug_Exit "rebuild" |
---|
| 1316 | fi |
---|
| 1317 | |
---|
| 1318 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
| 1319 | } |
---|
| 1320 | |
---|
| 1321 | ############################################################ |
---|
| 1322 | # Activate Running Environnment Variables |
---|
| 1323 | |
---|
| 1324 | function IGCM_sys_activ_variables { |
---|
| 1325 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1326 | if ( $DEBUG_sys ) ; then |
---|
| 1327 | echo "IGCM_sys_activ_variables" |
---|
| 1328 | fi |
---|
| 1329 | ulimit -s 2097152 |
---|
| 1330 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
| 1331 | } |
---|
| 1332 | |
---|
| 1333 | ############################################################ |
---|
| 1334 | # Desactivate Running Environnment Variables |
---|
| 1335 | |
---|
| 1336 | function IGCM_sys_desactiv_variables { |
---|
| 1337 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1338 | if ( $DEBUG_sys ) ; then |
---|
| 1339 | echo "IGCM_sys_desactiv_variables" |
---|
| 1340 | fi |
---|
| 1341 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
| 1342 | } |
---|
| 1343 | |
---|
| 1344 | ############################################################ |
---|
| 1345 | # Build run file |
---|
| 1346 | |
---|
| 1347 | function IGCM_sys_build_run_file { |
---|
| 1348 | IGCM_debug_PushStack "IGCM_sys_build_run_file" $@ |
---|
| 1349 | if ( $DEBUG_sys ) ; then |
---|
| 1350 | echo "IGCM_sys_build_run_file " $@ |
---|
| 1351 | fi |
---|
[190] | 1352 | NUM_PROC_OCE=1 |
---|
| 1353 | (( NUM_PROC_ATM = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE - 1)) |
---|
| 1354 | (( nb_tot_m1 = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE )) |
---|
[2] | 1355 | if [ $1 = MPI1 ]; then |
---|
| 1356 | cat <<EOF > run_file |
---|
| 1357 | #!/bin/bash |
---|
| 1358 | if [ \$SLURM_PROCID -eq 0 ] |
---|
| 1359 | then ./oasis ; |
---|
| 1360 | elif ( [ \$SLURM_PROCID -ge 1 ] && [ \$SLURM_PROCID -lt ${nb_tot_m1} ] ) |
---|
| 1361 | then ./lmdz.x ; |
---|
| 1362 | else ./opa.xx ; |
---|
| 1363 | fi |
---|
| 1364 | EOF |
---|
| 1365 | config_UserChoices_JobRunOptions='"-n ${BATCH_NUM_PROC_TOT}"' |
---|
| 1366 | IGCM_sys_Chmod u+x run_file |
---|
| 1367 | fi |
---|
| 1368 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
| 1369 | |
---|
| 1370 | } |
---|