Changeset 354 for branches/bibliolocean/src/genprehal.sh

Timestamp:

04/08/14 10:27:39 (10 years ago)

Author:

pinsard

Message:

fix thanks to coding rules; typo

File:

• branches/bibliolocean/src/genprehal.sh (modified) (8 diffs)

branches/bibliolocean/src/genprehal.sh

@@ -9 +9 @@
 # ========
 #
-# ``./genprehal.sh``
+# .. code-block:: bash
+#
+#    ./genprehal.sh``
 #
 # DESCRIPTION
@@ -16 +18 @@
 # prehal ++
 #
+# en fait j'ai renoncé à générer un XML parce que l'import massif de HAL
+# me ... (censuré)
+#
+# mais avec la commande suivante, on peut facilement avec
+# http://adsabs.harvard.edu/bib_abs.html, demander une série de code ads
+# qui sont utilisables dans le phase "depot" manuelle de HAL:
+#
+# .. code-block:: bash
+#
+#    grep doi /usr/work/incas/fplod/log//gtbiblio/prehal//missinghalidfull.bib | sed -e "s/doi *= *{//" -e "s/}.*$//"
+#
 # SEE ALSO
 # ========
@@ -26 +39 @@
 # ====
 #
-# make it work : now xml produced by jabref are not ok.
-# see prehal*.layout
-#
-# integrer dans trunk superbib
+# make it work : now xml produced by jabref are not ok and will never be
+#
+# HAL announce some bibtex importation facilities in a new release ...
+# let see what should be done for affiliation issue
 #
 # EVOLUTIONS
@@ -41 +54 @@
 #
 #   * ajout de la production d'un pdf pour pouvoir faire des copier/coller
-#     parce que l'importaion massive trop pénible vue la mauvaise volonte 
-#     de HAL (plus de XSD facilement accessible, doc pas  à jour etc.)
+#     parce que l'importation massive trop pénible vue la mauvaise volonté
+#     de HAL (plus de XSD facilement accessible, doc pas à jour etc.)
 #
 # - fplod 20121108T124317Z cratos.locean-ipsl.upmc.fr (Linux)
 #
-# * creation par externalisation de la fonctionnalité (pas fini) dans genbib
+# * creation par externalisation de la fonctionnalité (pas fini) dans genbib
 #
 #-
@@ -55 +68 @@
 case "${system}" in
     AIX|IRIX64)
-       echo "${command} : ${LINENO} : www : no specific posix checking"
+        echo "${command} : ${LINENO} : www : no specific posix checking"
     ;;
     *)
-       set -o posix
+        set -o posix
     ;;
 esac
@@ -89 +102 @@
 mkdir -p ${tmpdir}
 #
-# usefull artificial header of jabref file to enforce encoding
+# useful artificial header of jabref file to enforce encoding
 jabref_header ${tmpdir}/header_jabref
 #
@@ -138 +151 @@
     #++rm ${fbibmissinghalidfull}.${style}.tex 2> /dev/null
     echo "fin 1re passe latex"
-    # genereation rtf
+    # génération rtf
     jabref_rtf ${PROJECT}/../branches/bibliolocean/src/jabref.preferences.xml \
     ${fbibmissinghalidfull} toto.rtf
@@ -146 +159 @@
     if [ ${nltot} -gt ${nlmax} ]
     then
-       echo "${LINENO} : iii : more than ${nlmax} missing hal_id in ${biblioreffull}"
-       echo "${LINENO} : iii : need to split"
-       dsuffixsplit=$(dirname ${fcitemissinghalidfull})
-       bsuffixsplit=$(basename ${fcitemissinghalidfull} .bib)_s
-       split -l ${nlmax} -a 3 ${fcitemissinghalidfull} ${dsuffixsplit}/${bsuffixsplit}
-       list_fcitemissinghalid=$(find ${dsuffixsplit} -name "${bsuffixsplit}???")
-       list_fbibmissinghalid=""
-       for fcitemissinghalid in ${list_fcitemissinghalid}
-       do
-           # build condition expression 
-           bib2bibcond=$(sed -e "s/^/-c '\$key : \"/" -e "s/$/\"'/" ${fcitemissinghalid} | paste -s -d ' ' )
-           # extract the references
-           fbibmissinghalid=${tmpdir}/$(basename ${fcitemissinghalid}).bib
-           bib2bibcmd=$(echo "bib2bib ${bib2bibcond} -ob ${fbibmissinghalid} ${fbibmissinghalidfull}")
-           eval ${bib2bibcmd}
-           list_fbibmissinghalid="${list_fbibmissinghalid} ${fbibmissinghalid}"
-       done
+        echo "${LINENO} : iii : more than ${nlmax} missing hal_id in ${biblioreffull}"
+        echo "${LINENO} : iii : need to split"
+        dsuffixsplit=$(dirname ${fcitemissinghalidfull})
+        bsuffixsplit=$(basename ${fcitemissinghalidfull} .bib)_s
+        split -l ${nlmax} -a 3 ${fcitemissinghalidfull} ${dsuffixsplit}/${bsuffixsplit}
+        list_fcitemissinghalid=$(find ${dsuffixsplit} -name "${bsuffixsplit}???")
+        list_fbibmissinghalid=""
+        for fcitemissinghalid in ${list_fcitemissinghalid}
+        do
+            # build condition expression
+            bib2bibcond=$(sed -e "s/^/-c '\$key : \"/" -e "s/$/\"'/" ${fcitemissinghalid} | paste -s -d ' ' )
+            # extract the references
+            fbibmissinghalid=${tmpdir}/$(basename ${fcitemissinghalid}).bib
+            bib2bibcmd=$(echo "bib2bib ${bib2bibcond} -ob ${fbibmissinghalid} ${fbibmissinghalidfull}")
+            eval ${bib2bibcmd}
+            list_fbibmissinghalid="${list_fbibmissinghalid} ${fbibmissinghalid}"
+        done
     else
-       echo "${LINENO} : iii : less or just ${nlmax} missing hal_id in ${biblioref}"
-       echo "${LINENO} : iii : no need to split"
-       fbibmissinghalid=${tmpdir}/missinghalid.bib
-       list_fbibmissinghalid=${fbibmissinghalid}
-       cp ${fbibmissinghalidfull} ${fbibmissinghalid}
+        echo "${LINENO} : iii : less or just ${nlmax} missing hal_id in ${biblioref}"
+        echo "${LINENO} : iii : no need to split"
+        fbibmissinghalid=${tmpdir}/missinghalid.bib
+        list_fbibmissinghalid=${fbibmissinghalid}
+        cp ${fbibmissinghalidfull} ${fbibmissinghalid}
     fi
     for fbibmissinghalid in ${list_fbibmissinghalid}
     do
-       fbibjmissinghalid=${tmpdir}/$(basename ${fbibmissinghalid} .bib)_jabref.bib
-       more ${tmpdir}/header_jabref
-       read a
-       wc ${fbibmissinghalid}
-       cat ${tmpdir}/header_jabref ${fbibmissinghalid} > ${fbibjmissinghalid}
-       diff ${fbibmissinghalid} ${fbibjmissinghalid}
-       read a
-       #
-       # generation one XML file style prehal
-       fxmlmissinghalid=${tmpdir}/$(basename ${fbibmissinghalid}).xml
-       rm ${fxmlmissinghalid} 2> /dev/null
-       java -jar ${JABREF_DIR}/JabRef-${JABREF_VERSION}.jar -n true \
-          -p ${PROJECT}/../branches/bibliolocean/src/jabref.preferences.xml \
-          --output ${fxmlmissinghalid},prehal \
-          ${fbibjmissinghalid}
-       read a
+        fbibjmissinghalid=${tmpdir}/$(basename ${fbibmissinghalid} .bib)_jabref.bib
+        more ${tmpdir}/header_jabref
+        read a
+        wc ${fbibmissinghalid}
+        cat ${tmpdir}/header_jabref ${fbibmissinghalid} > ${fbibjmissinghalid}
+        diff ${fbibmissinghalid} ${fbibjmissinghalid}
+        read a
+        #
+        # generation one XML file style prehal
+        fxmlmissinghalid=${tmpdir}/$(basename ${fbibmissinghalid}).xml
+        rm ${fxmlmissinghalid} 2> /dev/null
+        java -jar ${JABREF_DIR}/JabRef-${JABREF_VERSION}.jar -n true \
+        -p ${PROJECT}/../branches/bibliolocean/src/jabref.preferences.xml \
+        --output ${fxmlmissinghalid},prehal \
+        ${fbibjmissinghalid}
+        read a
     done
 else