Changes between Version 75 and Version 76 of Doc/Running

Timestamp:

10/11/19 15:59:46 (5 years ago)

Author:

acosce

Comment:

--

Doc/Running

@@ -190 +190 @@
 }}}
 
-### The output files ###
+## The output files ##
 
 The output files are stored on file servers. Their name follows a standardized nomenclature: IGCM_OUT/!TagName/[!SpaceName]/[!ExperimentName]/!JobName/ in different subdirectories for each "Output" and "Analyse" component (e.g. ATM/Output,  ATM/Analyse), DEBUG, RESTART, ATLAS and MONITORING.
@@ -210 +210 @@
  * on the Ergon machine at IDRIS 
 
-#### Here is the storage directory structure of the output files produced at TGCC ####
+### Here is the storage directory structure of the output files produced at TGCC ###
 
 [[Image(Resultats-TGCC.jpg, 50%)]]
 
-#### Here is the storage directory structure of the output files produced at IDRIS ####
+### Here is the storage directory structure of the output files produced at IDRIS ###
 
 [[Image(Resultats-IDRIS.jpg, 50%)]]
 
-### Debug/ directory ### 
-A Debug/ directory is created if the simulation crashed. This directory contains text files from each of the model components to help you finding reasons for the crash. See also [wiki:DocGmonitor#Debug the chapter on monitoring and debugging].
-
-### How to continue or restart a simulation? ###
+## Debug/ directory ## 
+A Debug/ directory is created if the simulation crashed. This directory contains text files from each of the model components to help you finding reasons for the crash. See also [wiki:Doc/CheckDebug#Debug the chapter on monitoring and debugging].
+
+## How to continue or restart a simulation? ##
  1. If you want to continue an existing and finished simulation, change the simulation end date in the `config.card` file. Do not change the simulation start date.
  1. In the `run.card` file you must: 
@@ -227 +227 @@
   * specify `PeriodState = OnQueue`
  1. You must change the output file number in your job to make sure that the job doesn't fail by trying to replace an existing `Script_Output` file. By default it is `Script_Output_JobName_.0001` but you can replace it by `Script_Output_JobName_.CumulPeriod` (you will find `CumulPeriod` in `run.card`) 
- 1. If your simulation has stopped in the middle of a month and you want to restart it, you must delete the files created during this month (pack period) in your archives (`$CCCSTOREDIR/IGCM_OUT/etc`...). You can use the scripts [wiki:DocGmonitor#Tipsforidentifyingcomputingenvironmenterrors `modipsl/libIGCM/clean_PeriodLength.job` and `modipsl/libIGCM/clean_latestPackperiod.job`].
+ 1. If your simulation has stopped in the middle of a month and you want to restart it, you must delete the files created during this month (pack period) in your archives (`$CCCSTOREDIR/IGCM_OUT/etc`...). You can use the scripts [wiki:Doc/CheckDebug#Unknownerror `modipsl/libIGCM/clean_PeriodLength.job` and `modipsl/libIGCM/clean_latestPackperiod.job`].
  {{{
 #!sh
- cd $SUBMIT_DIR (ie modipsl/config/LMDZOR_v5/DIADEME)
- cp ../../../libIGCM/clean_PeriodLength.job . ; chmod 755 clean_PeriodLength.job  # Once and for all
+ cd $SUBMIT_DIR (ie modipsl/config/****/ExpDirectory)
+ cp ../../../libIGCM/clean_PeriodLength.job . 
  ./clean_PeriodLength.job   #   Answer to the questions
 
 same for clean_latestPackperiod.job
 
-ccc_msub Job_EXP00 or llsubmit Job_EXP00
+ccc_msub Job_EXP00 or sbatch Job_EXP00
 }}}