1 | #!/bin/bash |
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2 | #! |
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3 | #BSUB -q long |
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4 | #BSUB -n TOTAL_NPROCS |
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5 | #BSUB -J MPI_config |
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6 | #BSUB -o stdout.%J |
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7 | #BSUB -e stderr.%J |
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8 | |
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9 | |
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10 | |
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11 | ############################################################### |
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12 | # Test specific settings. Do not hand edit these lines; the fcm_job.sh script will set these |
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13 | # (via sed operating on this template job file). |
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14 | # |
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15 | OCEANCORES=NPROCS |
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16 | XIOS_NUMPROCS=NXIOPROCS |
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17 | export SETTE_DIR=DEF_SETTE_DIR |
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18 | |
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19 | ############################################################### |
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20 | # |
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21 | # set up mpp computing environment |
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22 | # |
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23 | # Local settings for machine IBM (EKMAN at INGV) |
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24 | # |
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25 | |
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26 | MPIPROGINF=detail |
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27 | export MPIPROGINF |
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28 | export LSF_PJL_TYPE="intelmpi" |
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29 | export MP_PGMMODEL=mpmd |
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30 | export MP_SHARED_MEMORY=yes |
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31 | export MPIRUN="mpirun -n $OCEANCORES" |
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32 | export MPIRUN_MPMD="mpirun -np $OCEANCORES ./opa : -np $XIOS_NUMPROCS /home/delrosso/XIOS_1.0/xios-1.0/bin/xios_server.exe" |
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33 | |
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34 | # |
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35 | # load sette functions (only post_test_tidyup needed) |
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36 | # |
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37 | . ${SETTE_DIR}/all_functions.sh |
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38 | |
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39 | |
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40 | # Don't remove neither change the following line |
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41 | # BODY |
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42 | |
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43 | # |
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44 | # These variables are needed by post_test_tidyup function in all_functions.sh |
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45 | # |
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46 | export EXE_DIR=DEF_EXE_DIR |
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47 | export INPUT_DIR=DEF_INPUT_DIR |
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48 | export CONFIG_DIR=DEF_CONFIG_DIR |
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49 | export NEMO_VALIDATION_DIR=DEF_NEMO_VALIDATION |
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50 | export NEW_CONF=DEF_NEW_CONF |
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51 | export CMP_NAM=DEF_CMP_NAM |
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52 | export TEST_NAME=DEF_TEST_NAME |
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53 | # |
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54 | # end of set up |
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55 | |
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56 | |
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57 | ############################################################### |
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58 | # |
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59 | # change to the working directory |
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60 | # |
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61 | cd ${EXE_DIR} |
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62 | |
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63 | # |
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64 | echo Running on host `hostname` |
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65 | echo Time is `date` |
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66 | echo Directory is `pwd` |
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67 | # |
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68 | # Run the parallel MPI executable |
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69 | # |
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70 | # echo "Running time ${MPIRUN} " $OCEANCORES " ./opa" |
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71 | # |
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72 | |
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73 | if [ MPI_FLAG == "yes" ]; then |
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74 | if [ $XIOS_NUMPROCS -eq 0 ]; then |
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75 | time ${MPIRUN} ./opa |
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76 | else |
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77 | time ${MPIRUN_MPMD} |
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78 | fi |
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79 | else |
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80 | time ./opa |
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81 | fi |
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82 | # |
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83 | post_test_tidyup |
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84 | |
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85 | # END_BODY |
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86 | # Don't remove neither change the previous line |
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87 | |
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88 | exit |
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