1 | %% ============================================================================== |
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2 | %% NEMO Reference Manual |
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3 | %% ============================================================================== |
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4 | |
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5 | |
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6 | %% Run ./PDF_creation.sh to generate the manual with latexmk |
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7 | |
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8 | |
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9 | %% Preamble |
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10 | %% ============================================================================== |
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11 | |
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12 | %% Document layout |
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13 | \documentclass{book} |
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14 | |
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15 | %% Custom style (.sty) |
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16 | \usepackage{../main/NEMO_manual} |
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17 | |
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18 | %% Include references and index for single subfile compilation |
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19 | \newcommand{\biblio}{\bibliography{../main/NEMO_manual}} |
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20 | \newcommand{\pindex}{\printindex} |
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21 | |
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22 | \makeindex |
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23 | |
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24 | %% End of common preamble between main and sub-files |
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25 | \begin{document} |
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26 | |
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27 | %% Override custom cmds for full manual compilation |
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28 | \renewcommand{\biblio}{} |
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29 | \renewcommand{\pindex}{} |
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30 | |
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31 | |
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32 | %% Frontmatter |
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33 | %% ============================================================================== |
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34 | |
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35 | %% Frontpage |
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36 | \title{ |
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37 | \includegraphics[height=0.05\textheight]{CMCC}\hfill |
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38 | \includegraphics[height=0.05\textheight]{CNRS}\hfill |
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39 | \includegraphics[height=0.05\textheight]{MOI} \hfill |
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40 | \includegraphics[height=0.05\textheight]{UKMO}\hfill |
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41 | \includegraphics[height=0.05\textheight]{NERC} \\ |
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42 | \includegraphics[ width=0.8\textwidth ]{NEMO_grey} \\ |
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43 | {\Huge NEMO ocean engine} \\ |
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44 | } |
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45 | \author{ |
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46 | \Large Gurvan Madec and NEMO System Team |
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47 | \thanks{ |
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48 | Yevgeny Aksenov, Mirek Andrejczuk, Mike Bell, Romain Bourdalle-Badie, Cl\'{e}ment Bricaud, |
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49 | J\'{e}r\^{o}me Chanut, Stefania Ciliberti, Emanuela Clementi, Andrew Coward, Damiano Delrosso, |
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50 | Massimiliano Drudi, Christian Eth\'{e}, Simona Flavoni, Doroteaciro Iovino, Claire L\'{e}vy, Tomas Lovato, |
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51 | Nicolas Martin, S\'{e}bastien Masson, Pierre Mathiot, Gelsomina Mattia, Francesca Mele, Silvia Mocavero, |
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52 | George Nurser, Enda O'Dea, Julien Paul, Cl\'{e}ment Rousset, Dave Storkey, Martin Vancoppenolle |
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53 | } \\ |
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54 | \\ |
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55 | \textit{Issue 27, Notes du P\^{o}le de mod\'{e}lisation} \\ |
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56 | \textit{Institut Pierre-Simon Laplace (IPSL)} \\ |
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57 | \textit{ISSN 1288-1619} |
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58 | } |
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59 | \date{Version 4.0 -- January 2019} |
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60 | %\date{\today} |
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61 | |
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62 | \maketitle |
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63 | \frontmatter |
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64 | |
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65 | |
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66 | %% ToC i.e. Table of Contents |
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67 | \dominitoc |
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68 | \tableofcontents |
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69 | |
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70 | |
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71 | %% Mainmatter |
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72 | %% ============================================================================== |
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73 | |
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74 | \mainmatter |
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75 | |
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76 | %% Foreword |
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77 | \subfile{../subfiles/foreword} |
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78 | |
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79 | %% Introduction |
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80 | \subfile{../subfiles/introduction} |
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81 | |
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82 | %% Chapters |
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83 | \subfile{../subfiles/chap_model_basics} |
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84 | \subfile{../subfiles/chap_time_domain} % Time discretisation (time stepping strategy) |
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85 | \subfile{../subfiles/chap_DOM} % Space discretisation |
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86 | \subfile{../subfiles/chap_TRA} % Tracer advection/diffusion equation |
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87 | \subfile{../subfiles/chap_DYN} % Dynamics : momentum equation |
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88 | \subfile{../subfiles/chap_SBC} % Surface Boundary Conditions |
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89 | \subfile{../subfiles/chap_LBC} % Lateral Boundary Conditions |
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90 | \subfile{../subfiles/chap_LDF} % Lateral diffusion |
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91 | \subfile{../subfiles/chap_ZDF} % Vertical diffusion |
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92 | \subfile{../subfiles/chap_DIA} % Outputs and Diagnostics |
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93 | \subfile{../subfiles/chap_OBS} % Observation operator |
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94 | \subfile{../subfiles/chap_ASM} % Assimilation increments |
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95 | \subfile{../subfiles/chap_STO} % Stochastic param. |
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96 | \subfile{../subfiles/chap_misc} % Miscellaneous topics |
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97 | \subfile{../subfiles/chap_CONFIG} % Predefined configurations |
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98 | |
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99 | %% Appendix |
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100 | \appendix |
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101 | \subfile{../subfiles/annex_A} % Generalised vertical coordinate |
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102 | \subfile{../subfiles/annex_B} % Diffusive operator |
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103 | \subfile{../subfiles/annex_C} % Discrete invariants of the eqs. |
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104 | \subfile{../subfiles/annex_iso} % Isoneutral diffusion using triads |
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105 | \subfile{../subfiles/annex_D} % Coding rules |
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106 | |
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107 | %% Not included |
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108 | %\subfile{../subfiles/chap_conservation} % |
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109 | %\subfile{../subfiles/annex_E} % Notes on some on going staff |
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110 | |
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111 | |
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112 | %% Backmatter |
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113 | %% ============================================================================== |
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114 | |
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115 | \backmatter |
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116 | |
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117 | %% Bibliography |
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118 | \cleardoublepage |
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119 | \phantomsection |
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120 | \addcontentsline{toc}{chapter}{Bibliography} |
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121 | \bibliography{../main/NEMO_manual} |
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122 | |
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123 | |
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124 | %% Index |
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125 | \cleardoublepage |
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126 | \phantomsection |
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127 | \addcontentsline{toc}{chapter}{Index} |
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128 | \printindex |
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129 | |
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130 | |
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131 | \end{document} |
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