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iom.F90 in NEMO/branches/2019/dev_r11265_ASINTER-01_Guillaume_ABL1D/src/OCE/IOM – NEMO

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source: NEMO/branches/2019/dev_r11265_ASINTER-01_Guillaume_ABL1D/src/OCE/IOM/iom.F90 @ 11857

Last change on this file since 11857 was 11857, checked in by gsamson, 4 years ago
dev_r11265_ABL: bulks compatibility with 3D atmospheric forcing (by reading only the first level) (#2131)
Property svn:keywords set to `Id`
File size: 128.3 KB

Rev	Line
[544]	1	MODULE iom
[9019]	2	!!======================================================================
[544]	3	!! * MODULE iom *
	4	!! Input/Output manager : Library to read input files
[9019]	5	!!======================================================================
[3764]	6	!! History : 2.0 ! 2005-12 (J. Belier) Original code
	7	!! 2.0 ! 2006-02 (S. Masson) Adaptation to NEMO
	8	!! 3.0 ! 2007-07 (D. Storkey) Changes to iom_gettime
	9	!! 3.4 ! 2012-12 (R. Bourdalle-Badie and G. Reffray) add C1D case
[6140]	10	!! 3.6 ! 2014-15 DIMG format removed
[7646]	11	!! 3.6 ! 2015-15 (J. Harle) Added procedure to read REAL attributes
[9019]	12	!! 4.0 ! 2017-11 (M. Andrejczuk) Extend IOM interface to write any 3D fields
	13	!!----------------------------------------------------------------------
[544]	14
[9019]	15	!!----------------------------------------------------------------------
[544]	16	!! iom_open : open a file read only
	17	!! iom_close : close a file or all files opened by iom
	18	!! iom_get : read a field (interfaced to several routines)
	19	!! iom_varid : get the id of a variable in a file
	20	!! iom_rstput : write a field in a restart file (interfaced to several routines)
[9019]	21	!!----------------------------------------------------------------------
[544]	22	USE dom_oce ! ocean space and time domain
[3764]	23	USE c1d ! 1D vertical configuration
[3294]	24	USE flo_oce ! floats module declarations
[679]	25	USE lbclnk ! lateal boundary condition / mpp exchanges
[544]	26	USE iom_def ! iom variables definitions
	27	USE iom_nf90 ! NetCDF format with native NetCDF library
[2715]	28	USE in_out_manager ! I/O manager
	29	USE lib_mpp ! MPP library
[1412]	30	#if defined key_iomput
[11304]	31	USE sbc_oce , ONLY : nn_fsbc, ght_abl, ghw_abl, e3t_abl, e3w_abl, jpka, jpkam1
[11586]	32	USE trc_oce , ONLY : nn_dttrc ! !: frequency of step on passive tracers
	33	USE icb_oce , ONLY : nclasses, class_num ! !: iceberg classes
[9570]	34	#if defined key_si3
[9019]	35	USE ice , ONLY : jpl
[4691]	36	#endif
[1725]	37	USE domngb ! ocean space and time domain
	38	USE phycst ! physical constants
	39	USE dianam ! build name of file
[3695]	40	USE xios
[1359]	41	# endif
[4148]	42	USE ioipsl, ONLY : ju2ymds ! for calendar
[4152]	43	USE crs ! Grid coarsening
[10222]	44	#if defined key_top
	45	USE trc, ONLY : profsed
	46	#endif
[9367]	47	USE lib_fortran
	48	USE diurnal_bulk, ONLY : ln_diurnal_only, ln_diurnal
[1359]	49
[544]	50	IMPLICIT NONE
[556]	51	PUBLIC ! must be public to be able to access iom_def through iom
[550]	52
[1457]	53	#if defined key_iomput
[1725]	54	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .TRUE. !: iom_put flag
[1457]	55	#else
	56	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .FALSE. !: iom_put flag
	57	#endif
[7646]	58	PUBLIC iom_init, iom_swap, iom_open, iom_close, iom_setkt, iom_varid, iom_get
[10522]	59	PUBLIC iom_chkatt, iom_getatt, iom_putatt, iom_getszuld, iom_rstput, iom_delay_rst, iom_put
[11413]	60	PUBLIC iom_use, iom_context_finalize, iom_miss_val
[544]	61
[752]	62	PRIVATE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
	63	PRIVATE iom_g0d, iom_g1d, iom_g2d, iom_g3d, iom_get_123d
[3294]	64	PRIVATE iom_p1d, iom_p2d, iom_p3d
[1412]	65	#if defined key_iomput
[4148]	66	PRIVATE iom_set_domain_attr, iom_set_axis_attr, iom_set_field_attr, iom_set_file_attr, iom_get_file_attr, iom_set_grid_attr
[5363]	67	PRIVATE set_grid, set_grid_bounds, set_scalar, set_xmlatt, set_mooring, iom_update_file_name, iom_sdate
[9367]	68	PRIVATE iom_set_rst_context, iom_set_rstw_active, iom_set_rstr_active
[1359]	69	# endif
[9535]	70	PUBLIC iom_set_rstw_var_active, iom_set_rstw_core, iom_set_rst_vars
[752]	71
[544]	72	INTERFACE iom_get
[550]	73	MODULE PROCEDURE iom_g0d, iom_g1d, iom_g2d, iom_g3d
[544]	74	END INTERFACE
[2528]	75	INTERFACE iom_getatt
[10425]	76	MODULE PROCEDURE iom_g0d_iatt, iom_g1d_iatt, iom_g0d_ratt, iom_g1d_ratt, iom_g0d_catt
[2528]	77	END INTERFACE
[7646]	78	INTERFACE iom_putatt
[10425]	79	MODULE PROCEDURE iom_p0d_iatt, iom_p1d_iatt, iom_p0d_ratt, iom_p1d_ratt, iom_p0d_catt
[7646]	80	END INTERFACE
[544]	81	INTERFACE iom_rstput
[550]	82	MODULE PROCEDURE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
[544]	83	END INTERFACE
[9802]	84	INTERFACE iom_put
	85	MODULE PROCEDURE iom_p0d, iom_p1d, iom_p2d, iom_p3d
	86	END INTERFACE iom_put
	87
[544]	88	!!----------------------------------------------------------------------
[9598]	89	!! NEMO/OCE 4.0 , NEMO Consortium (2018)
[1152]	90	!! $Id$
[10068]	91	!! Software governed by the CeCILL license (see ./LICENSE)
[544]	92	!!----------------------------------------------------------------------
	93	CONTAINS
	94
[9903]	95	SUBROUTINE iom_init( cdname, fname, ld_tmppatch )
[1359]	96	!!----------------------------------------------------------------------
	97	!! * ROUTINE *
	98	!!
	99	!! ** Purpose :
	100	!!
	101	!!----------------------------------------------------------------------
[9903]	102	CHARACTER(len=*), INTENT(in) :: cdname
[9367]	103	CHARACTER(len=*), OPTIONAL, INTENT(in) :: fname
[9903]	104	LOGICAL , OPTIONAL, INTENT(in) :: ld_tmppatch
[1412]	105	#if defined key_iomput
[9019]	106	!
[7646]	107	TYPE(xios_duration) :: dtime = xios_duration(0, 0, 0, 0, 0, 0)
	108	TYPE(xios_date) :: start_date
[9367]	109	CHARACTER(len=lc) :: clname
[7646]	110	INTEGER :: ji, jkmin
[9367]	111	LOGICAL :: llrst_context ! is context related to restart
[5415]	112	!
[7646]	113	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zt_bnds, zw_bnds
[11360]	114	REAL(wp), DIMENSION(2,jpkam1) :: za_bnds ! ABL vertical boundaries
[9903]	115	LOGICAL :: ll_tmppatch = .TRUE. !: seb: patch before we remove periodicity
	116	INTEGER :: nldi_save, nlei_save !: and close boundaries in output files
	117	INTEGER :: nldj_save, nlej_save !:
[1359]	118	!!----------------------------------------------------------------------
[9019]	119	!
[9802]	120	! seb: patch before we remove periodicity and close boundaries in output files
[9903]	121	IF( PRESENT(ld_tmppatch) ) THEN ; ll_tmppatch = ld_tmppatch
	122	ELSE ; ll_tmppatch = .TRUE.
	123	ENDIF
	124	IF ( ll_tmppatch ) THEN
[9802]	125	nldi_save = nldi ; nlei_save = nlei
	126	nldj_save = nldj ; nlej_save = nlej
	127	IF( nimpp == 1 ) nldi = 1
	128	IF( nimpp + jpi - 1 == jpiglo ) nlei = jpi
	129	IF( njmpp == 1 ) nldj = 1
	130	IF( njmpp + jpj - 1 == jpjglo ) nlej = jpj
	131	ENDIF
	132	!
[7646]	133	ALLOCATE( zt_bnds(2,jpk), zw_bnds(2,jpk) )
[9019]	134	!
[4152]	135	clname = cdname
	136	IF( TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(cdname)
[9570]	137	CALL xios_context_initialize(TRIM(clname), mpi_comm_oce)
[4152]	138	CALL iom_swap( cdname )
[9367]	139	llrst_context = (TRIM(cdname) == TRIM(crxios_context) .OR. TRIM(cdname) == TRIM(cwxios_context))
[1359]	140
[7646]	141	! Calendar type is now defined in xml file
[1725]	142	SELECT CASE ( nleapy ) ! Choose calendar for IOIPSL
[7646]	143	CASE ( 1) ; CALL xios_define_calendar( TYPE = "Gregorian", time_origin = xios_date(1900,01,01,00,00,00), &
	144	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
	145	CASE ( 0) ; CALL xios_define_calendar( TYPE = "NoLeap" , time_origin = xios_date(1900,01,01,00,00,00), &
	146	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
	147	CASE (30) ; CALL xios_define_calendar( TYPE = "D360" , time_origin = xios_date(1900,01,01,00,00,00), &
	148	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[1725]	149	END SELECT
[1359]	150
	151	! horizontal grid definition
[9367]	152	IF(.NOT.llrst_context) CALL set_scalar
[9019]	153	!
[5407]	154	IF( TRIM(cdname) == TRIM(cxios_context) ) THEN
[9984]	155	CALL set_grid( "T", glamt, gphit, .FALSE., .FALSE. )
	156	CALL set_grid( "U", glamu, gphiu, .FALSE., .FALSE. )
	157	CALL set_grid( "V", glamv, gphiv, .FALSE., .FALSE. )
	158	CALL set_grid( "W", glamt, gphit, .FALSE., .FALSE. )
[5385]	159	CALL set_grid_znl( gphit )
[5415]	160	!
	161	IF( ln_cfmeta ) THEN ! Add additional grid metadata
[5836]	162	CALL iom_set_domain_attr("grid_T", area = e1e2t(nldi:nlei, nldj:nlej))
	163	CALL iom_set_domain_attr("grid_U", area = e1e2u(nldi:nlei, nldj:nlej))
	164	CALL iom_set_domain_attr("grid_V", area = e1e2v(nldi:nlei, nldj:nlej))
	165	CALL iom_set_domain_attr("grid_W", area = e1e2t(nldi:nlei, nldj:nlej))
[5415]	166	CALL set_grid_bounds( "T", glamf, gphif, glamt, gphit )
	167	CALL set_grid_bounds( "U", glamv, gphiv, glamu, gphiu )
	168	CALL set_grid_bounds( "V", glamu, gphiu, glamv, gphiv )
	169	CALL set_grid_bounds( "W", glamf, gphif, glamt, gphit )
	170	ENDIF
[4152]	171	ENDIF
[9019]	172	!
[5407]	173	IF( TRIM(cdname) == TRIM(cxios_context)//"_crs" ) THEN
[4152]	174	CALL dom_grid_crs ! Save the parent grid information & Switch to coarse grid domain
	175	!
[9984]	176	CALL set_grid( "T", glamt_crs, gphit_crs, .FALSE., .FALSE. )
	177	CALL set_grid( "U", glamu_crs, gphiu_crs, .FALSE., .FALSE. )
	178	CALL set_grid( "V", glamv_crs, gphiv_crs, .FALSE., .FALSE. )
	179	CALL set_grid( "W", glamt_crs, gphit_crs, .FALSE., .FALSE. )
[5385]	180	CALL set_grid_znl( gphit_crs )
[4152]	181	!
	182	CALL dom_grid_glo ! Return to parent grid domain
[5415]	183	!
[9367]	184	IF( ln_cfmeta .AND. .NOT. llrst_context) THEN ! Add additional grid metadata
[5415]	185	CALL iom_set_domain_attr("grid_T", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	186	CALL iom_set_domain_attr("grid_U", area = e1u_crs(nldi:nlei, nldj:nlej) * e2u_crs(nldi:nlei, nldj:nlej))
	187	CALL iom_set_domain_attr("grid_V", area = e1v_crs(nldi:nlei, nldj:nlej) * e2v_crs(nldi:nlei, nldj:nlej))
	188	CALL iom_set_domain_attr("grid_W", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	189	CALL set_grid_bounds( "T", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	190	CALL set_grid_bounds( "U", glamv_crs, gphiv_crs, glamu_crs, gphiu_crs )
	191	CALL set_grid_bounds( "V", glamu_crs, gphiu_crs, glamv_crs, gphiv_crs )
	192	CALL set_grid_bounds( "W", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	193	ENDIF
[4152]	194	ENDIF
[9019]	195	!
[1359]	196	! vertical grid definition
[9367]	197	IF(.NOT.llrst_context) THEN
[11275]	198	CALL iom_set_axis_attr( "deptht", paxis = gdept_1d )
	199	CALL iom_set_axis_attr( "depthu", paxis = gdept_1d )
	200	CALL iom_set_axis_attr( "depthv", paxis = gdept_1d )
	201	CALL iom_set_axis_attr( "depthw", paxis = gdepw_1d )
[9367]	202
[11275]	203	! ABL
	204	IF( .NOT. ALLOCATED(ght_abl) ) THEN ! force definition for xml files (xios)
	205	ALLOCATE( ght_abl(jpka), ghw_abl(jpka), e3t_abl(jpka), e3w_abl(jpka) ) ! default allocation needed by iom
	206	ght_abl(:) = -1._wp ; ghw_abl(:) = -1._wp
	207	e3t_abl(:) = -1._wp ; e3w_abl(:) = -1._wp
	208	ENDIF
	209	CALL iom_set_axis_attr( "ght_abl", ght_abl(2:jpka) )
	210	CALL iom_set_axis_attr( "ghw_abl", ghw_abl(2:jpka) )
	211
[9367]	212	! Add vertical grid bounds
	213	jkmin = MIN(2,jpk) ! in case jpk=1 (i.e. sas2D)
	214	zt_bnds(2,: ) = gdept_1d(:)
	215	zt_bnds(1,jkmin:jpk) = gdept_1d(1:jpkm1)
	216	zt_bnds(1,1 ) = gdept_1d(1) - e3w_1d(1)
	217	zw_bnds(1,: ) = gdepw_1d(:)
	218	zw_bnds(2,1:jpkm1 ) = gdepw_1d(jkmin:jpk)
	219	zw_bnds(2,jpk: ) = gdepw_1d(jpk) + e3t_1d(jpk)
[11275]	220	CALL iom_set_axis_attr( "deptht", bounds=zw_bnds )
	221	CALL iom_set_axis_attr( "depthu", bounds=zw_bnds )
	222	CALL iom_set_axis_attr( "depthv", bounds=zw_bnds )
	223	CALL iom_set_axis_attr( "depthw", bounds=zt_bnds )
	224
	225	! ABL
	226	za_bnds(1,:) = ghw_abl(1:jpkam1)
	227	za_bnds(2,:) = ghw_abl(2:jpka )
	228	CALL iom_set_axis_attr( "ght_abl", bounds=za_bnds )
	229	za_bnds(1,:) = ght_abl(2:jpka )
	230	za_bnds(2,:) = ght_abl(2:jpka ) + e3w_abl(2:jpka)
	231	CALL iom_set_axis_attr( "ghw_abl", bounds=za_bnds )
[11586]	232
[9580]	233	CALL iom_set_axis_attr( "nfloat", (/ (REAL(ji,wp), ji=1,jpnfl) /) )
[9570]	234	# if defined key_si3
[9367]	235	CALL iom_set_axis_attr( "ncatice", (/ (REAL(ji,wp), ji=1,jpl) /) )
	236	! SIMIP diagnostics (4 main arctic straits)
	237	CALL iom_set_axis_attr( "nstrait", (/ (REAL(ji,wp), ji=1,4) /) )
[9019]	238	# endif
[10222]	239	#if defined key_top
[10817]	240	IF( ALLOCATED(profsed) ) CALL iom_set_axis_attr( "profsed", paxis = profsed )
[10222]	241	#endif
[9367]	242	CALL iom_set_axis_attr( "icbcla", class_num )
[10817]	243	CALL iom_set_axis_attr( "iax_20C", (/ REAL(20,wp) /) ) ! strange syntaxe and idea...
	244	CALL iom_set_axis_attr( "iax_28C", (/ REAL(28,wp) /) ) ! strange syntaxe and idea...
[9367]	245	ENDIF
	246	!
[1725]	247	! automatic definitions of some of the xml attributs
[9367]	248	IF( TRIM(cdname) == TRIM(crxios_context) ) THEN
	249	!set names of the fields in restart file IF using XIOS to read data
[9984]	250	CALL iom_set_rst_context(.TRUE.)
[9367]	251	CALL iom_set_rst_vars(rst_rfields)
	252	!set which fields are to be read from restart file
	253	CALL iom_set_rstr_active()
	254	ELSE IF( TRIM(cdname) == TRIM(cwxios_context) ) THEN
	255	!set names of the fields in restart file IF using XIOS to write data
[9984]	256	CALL iom_set_rst_context(.FALSE.)
[9367]	257	CALL iom_set_rst_vars(rst_wfields)
	258	!set which fields are to be written to a restart file
	259	CALL iom_set_rstw_active(fname)
	260	ELSE
	261	CALL set_xmlatt
	262	ENDIF
[9019]	263	!
[1359]	264	! end file definition
[4148]	265	dtime%second = rdt
[9019]	266	CALL xios_set_timestep( dtime )
[4148]	267	CALL xios_close_context_definition()
[9019]	268	CALL xios_update_calendar( 0 )
	269	!
[7646]	270	DEALLOCATE( zt_bnds, zw_bnds )
[9019]	271	!
[9903]	272	IF ( ll_tmppatch ) THEN
[9802]	273	nldi = nldi_save ; nlei = nlei_save
	274	nldj = nldj_save ; nlej = nlej_save
	275	ENDIF
[1359]	276	#endif
[9019]	277	!
[1359]	278	END SUBROUTINE iom_init
	279
[9367]	280	SUBROUTINE iom_set_rstw_var_active(field)
	281	!!---------------------------------------------------------------------
	282	!! * SUBROUTINE iom_set_rstw_var_active *
	283	!!
	284	!! ** Purpose : enable variable in restart file when writing with XIOS
	285	!!---------------------------------------------------------------------
	286	CHARACTER(len = *), INTENT(IN) :: field
	287	INTEGER :: i
	288	LOGICAL :: llis_set
[9535]	289	CHARACTER(LEN=256) :: clinfo ! info character
[1359]	290
[9535]	291	#if defined key_iomput
[9367]	292	llis_set = .FALSE.
	293
	294	DO i = 1, max_rst_fields
	295	IF(TRIM(rst_wfields(i)%vname) == field) THEN
	296	rst_wfields(i)%active = .TRUE.
	297	llis_set = .TRUE.
	298	EXIT
	299	ENDIF
	300	ENDDO
	301	!Warn if variable is not in defined in rst_wfields
	302	IF(.NOT.llis_set) THEN
[10425]	303	WRITE(ctmp1,*) 'iom_set_rstw_var_active: variable ', field ,' is available for writing but not defined'
	304	CALL ctl_stop( 'iom_set_rstw_var_active:', ctmp1 )
[9367]	305	ENDIF
[9535]	306	#else
[9536]	307	clinfo = 'iom_set_rstw_var_active: key_iomput is needed to use XIOS restart read/write functionality'
	308	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	309	#endif
[9367]	310
	311	END SUBROUTINE iom_set_rstw_var_active
	312
	313	SUBROUTINE iom_set_rstr_active()
	314	!!---------------------------------------------------------------------
	315	!! * SUBROUTINE iom_set_rstr_active *
	316	!!
	317	!! ** Purpose : define file name in XIOS context for reading restart file,
	318	!! enable variables present in restart file for reading with XIOS
	319	!!---------------------------------------------------------------------
	320
	321	!sets enabled = .TRUE. for each field in restart file
	322	CHARACTER(len=256) :: rst_file
[9535]	323
	324	#if defined key_iomput
[9367]	325	TYPE(xios_field) :: field_hdl
	326	TYPE(xios_file) :: file_hdl
	327	TYPE(xios_filegroup) :: filegroup_hdl
	328	INTEGER :: i
	329	CHARACTER(lc) :: clpath
	330
	331	clpath = TRIM(cn_ocerst_indir)
	332	IF( clpath(LEN_TRIM(clpath):) /= '/' ) clpath = TRIM(clpath) // '/'
	333	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	334	rst_file = TRIM(clpath)//TRIM(cn_ocerst_in)
	335	ELSE
	336	rst_file = TRIM(clpath)//'1_'//TRIM(cn_ocerst_in)
	337	ENDIF
	338	!set name of the restart file and enable available fields
	339	if(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS) to: ',rst_file
	340	CALL xios_get_handle("file_definition", filegroup_hdl )
	341	CALL xios_add_child(filegroup_hdl, file_hdl, 'rrestart')
	342	CALL xios_set_file_attr( "rrestart", name=trim(rst_file), type="one_file", &
	343	par_access="collective", enabled=.TRUE., mode="read", &
	344	output_freq=xios_timestep)
	345	!define variables for restart context
	346	DO i = 1, max_rst_fields
	347	IF( TRIM(rst_rfields(i)%vname) /= "NO_NAME") THEN
	348	IF( iom_varid( numror, TRIM(rst_rfields(i)%vname), ldstop = .FALSE. ) > 0 ) THEN
	349	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_rfields(i)%vname))
	350	SELECT CASE (TRIM(rst_rfields(i)%grid))
	351	CASE ("grid_N_3D")
	352	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	353	domain_ref="grid_N", axis_ref="nav_lev", operation = "instant")
	354	CASE ("grid_N")
	355	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	356	domain_ref="grid_N", operation = "instant")
	357	CASE ("grid_vector")
	358	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	359	axis_ref="nav_lev", operation = "instant")
	360	CASE ("grid_scalar")
	361	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	362	scalar_ref = "grid_scalar", operation = "instant")
	363	END SELECT
	364	IF(lwp) WRITE(numout,*) 'XIOS read: ', TRIM(rst_rfields(i)%vname), ' enabled in ', TRIM(rst_file)
	365	ENDIF
	366	ENDIF
	367	END DO
[9535]	368	#endif
[9367]	369	END SUBROUTINE iom_set_rstr_active
	370
	371	SUBROUTINE iom_set_rstw_core(cdmdl)
	372	!!---------------------------------------------------------------------
	373	!! * SUBROUTINE iom_set_rstw_core *
	374	!!
	375	!! ** Purpose : set variables which are always in restart file
	376	!!---------------------------------------------------------------------
	377	CHARACTER (len=*), INTENT (IN) :: cdmdl ! model OPA or SAS
[9535]	378	CHARACTER(LEN=256) :: clinfo ! info character
	379	#if defined key_iomput
[9367]	380	IF(cdmdl == "OPA") THEN
	381	!from restart.F90
	382	CALL iom_set_rstw_var_active("rdt")
	383	IF ( .NOT. ln_diurnal_only ) THEN
	384	CALL iom_set_rstw_var_active('ub' )
	385	CALL iom_set_rstw_var_active('vb' )
	386	CALL iom_set_rstw_var_active('tb' )
	387	CALL iom_set_rstw_var_active('sb' )
	388	CALL iom_set_rstw_var_active('sshb')
	389	!
	390	CALL iom_set_rstw_var_active('un' )
	391	CALL iom_set_rstw_var_active('vn' )
	392	CALL iom_set_rstw_var_active('tn' )
	393	CALL iom_set_rstw_var_active('sn' )
	394	CALL iom_set_rstw_var_active('sshn')
	395	CALL iom_set_rstw_var_active('rhop')
	396	! extra variable needed for the ice sheet coupling
	397	IF ( ln_iscpl ) THEN
	398	CALL iom_set_rstw_var_active('tmask')
	399	CALL iom_set_rstw_var_active('umask')
	400	CALL iom_set_rstw_var_active('vmask')
	401	CALL iom_set_rstw_var_active('smask')
	402	CALL iom_set_rstw_var_active('e3t_n')
	403	CALL iom_set_rstw_var_active('e3u_n')
	404	CALL iom_set_rstw_var_active('e3v_n')
	405	CALL iom_set_rstw_var_active('gdepw_n')
	406	END IF
	407	ENDIF
	408	IF(ln_diurnal) CALL iom_set_rstw_var_active('Dsst')
	409	!from trasbc.F90
	410	CALL iom_set_rstw_var_active('sbc_hc_b')
	411	CALL iom_set_rstw_var_active('sbc_sc_b')
	412	ENDIF
[9535]	413	#else
[9536]	414	clinfo = 'iom_set_rstw_core: key_iomput is needed to use XIOS restart read/write functionality'
	415	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	416	#endif
[9367]	417	END SUBROUTINE iom_set_rstw_core
	418
	419	SUBROUTINE iom_set_rst_vars(fields)
	420	!!---------------------------------------------------------------------
[9535]	421	!! * SUBROUTINE iom_set_rst_vars *
[9367]	422	!!
	423	!! ** Purpose : Fill array fields with the information about all
	424	!! possible variables and corresponding grids definition
	425	!! for reading/writing restart with XIOS
	426	!!---------------------------------------------------------------------
	427	TYPE(RST_FIELD), INTENT(INOUT) :: fields(max_rst_fields)
[9535]	428	INTEGER :: i
[9367]	429
	430	i = 0
	431	i = i + 1; fields(i)%vname="rdt"; fields(i)%grid="grid_scalar"
	432	i = i + 1; fields(i)%vname="un"; fields(i)%grid="grid_N_3D"
	433	i = i + 1; fields(i)%vname="ub"; fields(i)%grid="grid_N_3D"
	434	i = i + 1; fields(i)%vname="vn"; fields(i)%grid="grid_N_3D"
	435	i = i + 1; fields(i)%vname="vb"; fields(i)%grid="grid_N_3D"
	436	i = i + 1; fields(i)%vname="tn"; fields(i)%grid="grid_N_3D"
	437	i = i + 1; fields(i)%vname="tb"; fields(i)%grid="grid_N_3D"
	438	i = i + 1; fields(i)%vname="sn"; fields(i)%grid="grid_N_3D"
	439	i = i + 1; fields(i)%vname="sb"; fields(i)%grid="grid_N_3D"
	440	i = i + 1; fields(i)%vname="sshn"; fields(i)%grid="grid_N"
	441	i = i + 1; fields(i)%vname="sshb"; fields(i)%grid="grid_N"
	442	i = i + 1; fields(i)%vname="rhop"; fields(i)%grid="grid_N_3D"
	443	i = i + 1; fields(i)%vname="kt"; fields(i)%grid="grid_scalar"
	444	i = i + 1; fields(i)%vname="ndastp"; fields(i)%grid="grid_scalar"
	445	i = i + 1; fields(i)%vname="adatrj"; fields(i)%grid="grid_scalar"
	446	i = i + 1; fields(i)%vname="utau_b"; fields(i)%grid="grid_N"
	447	i = i + 1; fields(i)%vname="vtau_b"; fields(i)%grid="grid_N"
	448	i = i + 1; fields(i)%vname="qns_b"; fields(i)%grid="grid_N"
	449	i = i + 1; fields(i)%vname="emp_b"; fields(i)%grid="grid_N"
	450	i = i + 1; fields(i)%vname="sfx_b"; fields(i)%grid="grid_N"
	451	i = i + 1; fields(i)%vname="en" ; fields(i)%grid="grid_N_3D"
	452	i = i + 1; fields(i)%vname="avt_k"; fields(i)%grid="grid_N_3D"
	453	i = i + 1; fields(i)%vname="avm_k"; fields(i)%grid="grid_N_3D"
	454	i = i + 1; fields(i)%vname="dissl"; fields(i)%grid="grid_N_3D"
	455	i = i + 1; fields(i)%vname="sbc_hc_b"; fields(i)%grid="grid_N"
	456	i = i + 1; fields(i)%vname="sbc_sc_b"; fields(i)%grid="grid_N"
	457	i = i + 1; fields(i)%vname="qsr_hc_b"; fields(i)%grid="grid_N_3D"
	458	i = i + 1; fields(i)%vname="fraqsr_1lev"; fields(i)%grid="grid_N"
	459	i = i + 1; fields(i)%vname="greenland_icesheet_mass"
	460	fields(i)%grid="grid_scalar"
	461	i = i + 1; fields(i)%vname="greenland_icesheet_timelapsed"
	462	fields(i)%grid="grid_scalar"
	463	i = i + 1; fields(i)%vname="greenland_icesheet_mass_roc"
	464	fields(i)%grid="grid_scalar"
	465	i = i + 1; fields(i)%vname="antarctica_icesheet_mass"
	466	fields(i)%grid="grid_scalar"
	467	i = i + 1; fields(i)%vname="antarctica_icesheet_timelapsed"
	468	fields(i)%grid="grid_scalar"
	469	i = i + 1; fields(i)%vname="antarctica_icesheet_mass_roc"
	470	fields(i)%grid="grid_scalar"
	471	i = i + 1; fields(i)%vname="frc_v"; fields(i)%grid="grid_scalar"
	472	i = i + 1; fields(i)%vname="frc_t"; fields(i)%grid="grid_scalar"
	473	i = i + 1; fields(i)%vname="frc_s"; fields(i)%grid="grid_scalar"
	474	i = i + 1; fields(i)%vname="frc_wn_t"; fields(i)%grid="grid_scalar"
	475	i = i + 1; fields(i)%vname="frc_wn_s"; fields(i)%grid="grid_scalar"
	476	i = i + 1; fields(i)%vname="ssh_ini"; fields(i)%grid="grid_N"
	477	i = i + 1; fields(i)%vname="e3t_ini"; fields(i)%grid="grid_N_3D"
	478	i = i + 1; fields(i)%vname="hc_loc_ini"; fields(i)%grid="grid_N_3D"
	479	i = i + 1; fields(i)%vname="sc_loc_ini"; fields(i)%grid="grid_N_3D"
	480	i = i + 1; fields(i)%vname="ssh_hc_loc_ini"; fields(i)%grid="grid_N"
	481	i = i + 1; fields(i)%vname="ssh_sc_loc_ini"; fields(i)%grid="grid_N"
	482	i = i + 1; fields(i)%vname="tilde_e3t_b"; fields(i)%grid="grid_N"
	483	i = i + 1; fields(i)%vname="tilde_e3t_n"; fields(i)%grid="grid_N"
	484	i = i + 1; fields(i)%vname="hdiv_lf"; fields(i)%grid="grid_N"
	485	i = i + 1; fields(i)%vname="ub2_b"; fields(i)%grid="grid_N"
	486	i = i + 1; fields(i)%vname="vb2_b"; fields(i)%grid="grid_N"
	487	i = i + 1; fields(i)%vname="sshbb_e"; fields(i)%grid="grid_N"
	488	i = i + 1; fields(i)%vname="ubb_e"; fields(i)%grid="grid_N"
	489	i = i + 1; fields(i)%vname="vbb_e"; fields(i)%grid="grid_N"
	490	i = i + 1; fields(i)%vname="sshb_e"; fields(i)%grid="grid_N"
	491	i = i + 1; fields(i)%vname="ub_e"; fields(i)%grid="grid_N"
	492	i = i + 1; fields(i)%vname="vb_e"; fields(i)%grid="grid_N"
	493	i = i + 1; fields(i)%vname="fwf_isf_b"; fields(i)%grid="grid_N"
	494	i = i + 1; fields(i)%vname="isf_sc_b"; fields(i)%grid="grid_N"
	495	i = i + 1; fields(i)%vname="isf_hc_b"; fields(i)%grid="grid_N"
	496	i = i + 1; fields(i)%vname="ssh_ibb"; fields(i)%grid="grid_N"
	497	i = i + 1; fields(i)%vname="rnf_b"; fields(i)%grid="grid_N"
	498	i = i + 1; fields(i)%vname="rnf_hc_b"; fields(i)%grid="grid_N"
	499	i = i + 1; fields(i)%vname="rnf_sc_b"; fields(i)%grid="grid_N"
	500	i = i + 1; fields(i)%vname="nn_fsbc"; fields(i)%grid="grid_scalar"
	501	i = i + 1; fields(i)%vname="ssu_m"; fields(i)%grid="grid_N"
	502	i = i + 1; fields(i)%vname="ssv_m"; fields(i)%grid="grid_N"
	503	i = i + 1; fields(i)%vname="sst_m"; fields(i)%grid="grid_N"
	504	i = i + 1; fields(i)%vname="sss_m"; fields(i)%grid="grid_N"
	505	i = i + 1; fields(i)%vname="ssh_m"; fields(i)%grid="grid_N"
	506	i = i + 1; fields(i)%vname="e3t_m"; fields(i)%grid="grid_N"
	507	i = i + 1; fields(i)%vname="frq_m"; fields(i)%grid="grid_N"
	508	i = i + 1; fields(i)%vname="avmb"; fields(i)%grid="grid_vector"
	509	i = i + 1; fields(i)%vname="avtb"; fields(i)%grid="grid_vector"
	510	i = i + 1; fields(i)%vname="ub2_i_b"; fields(i)%grid="grid_N"
	511	i = i + 1; fields(i)%vname="vb2_i_b"; fields(i)%grid="grid_N"
	512	i = i + 1; fields(i)%vname="ntime"; fields(i)%grid="grid_scalar"
	513	i = i + 1; fields(i)%vname="Dsst"; fields(i)%grid="grid_scalar"
	514	i = i + 1; fields(i)%vname="tmask"; fields(i)%grid="grid_N_3D"
	515	i = i + 1; fields(i)%vname="umask"; fields(i)%grid="grid_N_3D"
	516	i = i + 1; fields(i)%vname="vmask"; fields(i)%grid="grid_N_3D"
	517	i = i + 1; fields(i)%vname="smask"; fields(i)%grid="grid_N_3D"
	518	i = i + 1; fields(i)%vname="gdepw_n"; fields(i)%grid="grid_N_3D"
	519	i = i + 1; fields(i)%vname="e3t_n"; fields(i)%grid="grid_N_3D"
	520	i = i + 1; fields(i)%vname="e3u_n"; fields(i)%grid="grid_N_3D"
	521	i = i + 1; fields(i)%vname="e3v_n"; fields(i)%grid="grid_N_3D"
	522	i = i + 1; fields(i)%vname="surf_ini"; fields(i)%grid="grid_N"
	523	i = i + 1; fields(i)%vname="e3t_b"; fields(i)%grid="grid_N_3D"
	524	i = i + 1; fields(i)%vname="hmxl_n"; fields(i)%grid="grid_N_3D"
	525	i = i + 1; fields(i)%vname="un_bf"; fields(i)%grid="grid_N"
	526	i = i + 1; fields(i)%vname="vn_bf"; fields(i)%grid="grid_N"
	527	i = i + 1; fields(i)%vname="hbl"; fields(i)%grid="grid_N"
	528	i = i + 1; fields(i)%vname="hbli"; fields(i)%grid="grid_N"
	529	i = i + 1; fields(i)%vname="wn"; fields(i)%grid="grid_N_3D"
	530
	531	IF( i-1 > max_rst_fields) THEN
[10425]	532	WRITE(ctmp1,*) 'E R R O R : iom_set_rst_vars SIZE of RST_FIELD array is too small'
	533	CALL ctl_stop( 'iom_set_rst_vars:', ctmp1 )
[9367]	534	ENDIF
	535	END SUBROUTINE iom_set_rst_vars
	536
	537
	538	SUBROUTINE iom_set_rstw_active(cdrst_file)
	539	!!---------------------------------------------------------------------
[9535]	540	!! * SUBROUTINE iom_set_rstw_active *
[9367]	541	!!
	542	!! ** Purpose : define file name in XIOS context for writing restart
	543	!! enable variables present in restart file for writing
	544	!!---------------------------------------------------------------------
	545	!sets enabled = .TRUE. for each field in restart file
	546	CHARACTER(len=*) :: cdrst_file
	547	#if defined key_iomput
	548	TYPE(xios_field) :: field_hdl
	549	TYPE(xios_file) :: file_hdl
	550	TYPE(xios_filegroup) :: filegroup_hdl
	551	INTEGER :: i
	552	CHARACTER(lc) :: clpath
	553
	554	!set name of the restart file and enable available fields
	555	IF(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS write) to: ',cdrst_file
	556	CALL xios_get_handle("file_definition", filegroup_hdl )
	557	CALL xios_add_child(filegroup_hdl, file_hdl, 'wrestart')
	558	IF(nxioso.eq.1) THEN
	559	CALL xios_set_file_attr( "wrestart", type="one_file", enabled=.TRUE.,&
	560	mode="write", output_freq=xios_timestep)
	561	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in one_file mode'
	562	ELSE
	563	CALL xios_set_file_attr( "wrestart", type="multiple_file", enabled=.TRUE.,&
	564	mode="write", output_freq=xios_timestep)
	565	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in multiple_file mode'
	566	ENDIF
	567	CALL xios_set_file_attr( "wrestart", name=trim(cdrst_file))
	568	!define fields for restart context
	569	DO i = 1, max_rst_fields
	570	IF( rst_wfields(i)%active ) THEN
	571	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_wfields(i)%vname))
	572	SELECT CASE (TRIM(rst_wfields(i)%grid))
	573	CASE ("grid_N_3D")
	574	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	575	domain_ref="grid_N", axis_ref="nav_lev", prec = 8, operation = "instant")
	576	CASE ("grid_N")
	577	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	578	domain_ref="grid_N", prec = 8, operation = "instant")
	579	CASE ("grid_vector")
	580	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	581	axis_ref="nav_lev", prec = 8, operation = "instant")
	582	CASE ("grid_scalar")
	583	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	584	scalar_ref = "grid_scalar", prec = 8, operation = "instant")
	585	END SELECT
	586	ENDIF
	587	END DO
	588	#endif
	589	END SUBROUTINE iom_set_rstw_active
	590
[9984]	591	SUBROUTINE iom_set_rst_context(ld_rstr)
[9367]	592	!!---------------------------------------------------------------------
[9535]	593	!! * SUBROUTINE iom_set_rst_context *
[9367]	594	!!
	595	!! ** Purpose : Define domain, axis and grid for restart (read/write)
	596	!! context
	597	!!
	598	!!---------------------------------------------------------------------
[9984]	599	LOGICAL, INTENT(IN) :: ld_rstr
	600	!ld_rstr is true for restart context. There is no need to define grid for
	601	!restart read, because it's read from file
[9367]	602	#if defined key_iomput
	603	TYPE(xios_domaingroup) :: domaingroup_hdl
	604	TYPE(xios_domain) :: domain_hdl
	605	TYPE(xios_axisgroup) :: axisgroup_hdl
	606	TYPE(xios_axis) :: axis_hdl
	607	TYPE(xios_scalar) :: scalar_hdl
	608	TYPE(xios_scalargroup) :: scalargroup_hdl
	609
	610	CALL xios_get_handle("domain_definition",domaingroup_hdl)
	611	CALL xios_add_child(domaingroup_hdl, domain_hdl, "grid_N")
[9984]	612	CALL set_grid("N", glamt, gphit, .TRUE., ld_rstr)
[9367]	613
	614	CALL xios_get_handle("axis_definition",axisgroup_hdl)
	615	CALL xios_add_child(axisgroup_hdl, axis_hdl, "nav_lev")
	616	!AGRIF fails to compile when unit= is in call to xios_set_axis_attr
	617	! CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels", unit="m", positive="down")
	618	CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels in meters", positive="down")
	619	CALL iom_set_axis_attr( "nav_lev", paxis = gdept_1d )
	620
	621	CALL xios_get_handle("scalar_definition", scalargroup_hdl)
	622	CALL xios_add_child(scalargroup_hdl, scalar_hdl, "grid_scalar")
	623	#endif
	624	END SUBROUTINE iom_set_rst_context
	625
[4152]	626	SUBROUTINE iom_swap( cdname )
[1793]	627	!!---------------------------------------------------------------------
	628	!! * SUBROUTINE iom_swap *
	629	!!
	630	!! ** Purpose : swap context between different agrif grid for xmlio_server
	631	!!---------------------------------------------------------------------
[4152]	632	CHARACTER(len=*), INTENT(in) :: cdname
[1793]	633	#if defined key_iomput
[3695]	634	TYPE(xios_context) :: nemo_hdl
[1793]	635
[4152]	636	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	637	CALL xios_get_handle(TRIM(cdname),nemo_hdl)
	638	ELSE
	639	CALL xios_get_handle(TRIM(Agrif_CFixed())//"_"//TRIM(cdname),nemo_hdl)
	640	ENDIF
	641	!
	642	CALL xios_set_current_context(nemo_hdl)
[1793]	643	#endif
[4152]	644	!
[1793]	645	END SUBROUTINE iom_swap
	646
	647
[10425]	648	SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, ldstop, ldiof, kdlev )
[544]	649	!!---------------------------------------------------------------------
	650	!! * SUBROUTINE iom_open *
	651	!!
	652	!! ** Purpose : open an input file (return 0 if not found)
	653	!!---------------------------------------------------------------------
	654	CHARACTER(len=*), INTENT(in ) :: cdname ! File name
	655	INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file
	656	LOGICAL , INTENT(in ), OPTIONAL :: ldwrt ! open in write modeb (default = .FALSE.)
	657	INTEGER , INTENT(in ), OPTIONAL :: kdom ! Type of domain to be written (default = jpdom_local_noovlap)
[679]	658	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if open to read a non-existing file (default = .TRUE.)
[1319]	659	LOGICAL , INTENT(in ), OPTIONAL :: ldiof ! Interp On the Fly, needed for AGRIF (default = .FALSE.)
[9019]	660	INTEGER , INTENT(in ), OPTIONAL :: kdlev ! number of vertical levels
	661	!
[4148]	662	CHARACTER(LEN=256) :: clname ! the name of the file based on cdname [[+clcpu]+clcpu]
	663	CHARACTER(LEN=256) :: cltmpn ! tempory name to store clname (in writting mode)
[6140]	664	CHARACTER(LEN=10) :: clsuffix ! ".nc"
[550]	665	CHARACTER(LEN=15) :: clcpu ! the cpu number (max jpmax_digits digits)
[4148]	666	CHARACTER(LEN=256) :: clinfo ! info character
[544]	667	LOGICAL :: llok ! check the existence
[679]	668	LOGICAL :: llwrt ! local definition of ldwrt
[1200]	669	LOGICAL :: llnoov ! local definition to read overlap
[679]	670	LOGICAL :: llstop ! local definition of ldstop
[1319]	671	LOGICAL :: lliof ! local definition of ldiof
[544]	672	INTEGER :: icnt ! counter for digits in clcpu (max = jpmax_digits)
	673	INTEGER :: iln, ils ! lengths of character
	674	INTEGER :: idom ! type of domain
	675	INTEGER :: istop !
	676	INTEGER, DIMENSION(2,5) :: idompar ! domain parameters:
	677	! local number of points for x,y dimensions
	678	! position of first local point for x,y dimensions
	679	! position of last local point for x,y dimensions
	680	! start halo size for x,y dimensions
	681	! end halo size for x,y dimensions
	682	!---------------------------------------------------------------------
	683	! Initializations and control
	684	! =============
[1341]	685	kiomid = -1
[544]	686	clinfo = ' iom_open ~~~ '
	687	istop = nstop
	688	! if iom_open is called for the first time: initialize iom_file(:)%nfid to 0
	689	! (could be done when defining iom_file in f95 but not in f90)
[1441]	690	IF( Agrif_Root() ) THEN
	691	IF( iom_open_init == 0 ) THEN
	692	iom_file(:)%nfid = 0
	693	iom_open_init = 1
	694	ENDIF
[1409]	695	ENDIF
[544]	696	! do we read or write the file?
	697	IF( PRESENT(ldwrt) ) THEN ; llwrt = ldwrt
	698	ELSE ; llwrt = .FALSE.
	699	ENDIF
[679]	700	! do we call ctl_stop if we try to open a non-existing file in read mode?
	701	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	702	ELSE ; llstop = .TRUE.
	703	ENDIF
[1319]	704	! are we using interpolation on the fly?
	705	IF( PRESENT(ldiof) ) THEN ; lliof = ldiof
	706	ELSE ; lliof = .FALSE.
	707	ENDIF
[1200]	708	! do we read the overlap
	709	! ugly patch SM+JMM+RB to overwrite global definition in some cases
[10016]	710	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
[544]	711	! create the file name by added, if needed, TRIM(Agrif_CFixed()) and TRIM(clsuffix)
	712	! =============
	713	clname = trim(cdname)
[1319]	714	IF ( .NOT. Agrif_Root() .AND. .NOT. lliof ) THEN
[1200]	715	iln = INDEX(clname,'/')
	716	cltmpn = clname(1:iln)
	717	clname = clname(iln+1:LEN_TRIM(clname))
	718	clname=TRIM(cltmpn)//TRIM(Agrif_CFixed())//'_'//TRIM(clname)
	719	ENDIF
[544]	720	! which suffix should we use?
[10425]	721	clsuffix = '.nc'
[544]	722	! Add the suffix if needed
	723	iln = LEN_TRIM(clname)
	724	ils = LEN_TRIM(clsuffix)
[742]	725	IF( iln <= ils .OR. INDEX( TRIM(clname), TRIM(clsuffix), back = .TRUE. ) /= iln - ils + 1 ) &
	726	& clname = TRIM(clname)//TRIM(clsuffix)
[544]	727	cltmpn = clname ! store this name
	728	! try to find if the file to be opened already exist
	729	! =============
	730	INQUIRE( FILE = clname, EXIST = llok )
	731	IF( .NOT.llok ) THEN
	732	! we try to add the cpu number to the name
[6140]	733	WRITE(clcpu,*) narea-1
	734
[544]	735	clcpu = TRIM(ADJUSTL(clcpu))
[679]	736	iln = INDEX(clname,TRIM(clsuffix), back = .TRUE.)
[544]	737	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	738	icnt = 0
	739	INQUIRE( FILE = clname, EXIST = llok )
	740	! we try different formats for the cpu number by adding 0
	741	DO WHILE( .NOT.llok .AND. icnt < jpmax_digits )
	742	clcpu = "0"//trim(clcpu)
	743	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	744	INQUIRE( FILE = clname, EXIST = llok )
	745	icnt = icnt + 1
	746	END DO
[9367]	747	ELSE
	748	lxios_sini = .TRUE.
[544]	749	ENDIF
[679]	750	IF( llwrt ) THEN
	751	! check the domain definition
	752	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	753	! idom = jpdom_local_noovlap ! default definition
[1200]	754	IF( llnoov ) THEN ; idom = jpdom_local_noovlap ! default definition
	755	ELSE ; idom = jpdom_local_full ! default definition
[679]	756	ENDIF
	757	IF( PRESENT(kdom) ) idom = kdom
	758	! create the domain informations
	759	! =============
	760	SELECT CASE (idom)
	761	CASE (jpdom_local_full)
	762	idompar(:,1) = (/ jpi , jpj /)
	763	idompar(:,2) = (/ nimpp , njmpp /)
	764	idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /)
	765	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	766	idompar(:,5) = (/ jpi - nlei , jpj - nlej /)
	767	CASE (jpdom_local_noextra)
	768	idompar(:,1) = (/ nlci , nlcj /)
	769	idompar(:,2) = (/ nimpp , njmpp /)
	770	idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /)
	771	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	772	idompar(:,5) = (/ nlci - nlei , nlcj - nlej /)
	773	CASE (jpdom_local_noovlap)
	774	idompar(:,1) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	775	idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /)
	776	idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /)
	777	idompar(:,4) = (/ 0 , 0 /)
	778	idompar(:,5) = (/ 0 , 0 /)
	779	CASE DEFAULT
	780	CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' )
	781	END SELECT
	782	ENDIF
[6140]	783	! Open the NetCDF file
[544]	784	! =============
	785	! do we have some free file identifier?
	786	IF( MINVAL(iom_file(:)%nfid) /= 0 ) &
[679]	787	& CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' )
	788	! if no file was found...
	789	IF( .NOT. llok ) THEN
	790	IF( .NOT. llwrt ) THEN ! we are in read mode
	791	IF( llstop ) THEN ; CALL ctl_stop( TRIM(clinfo), 'File '//TRIM(cltmpn)//'* not found' )
	792	ELSE ; istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
	793	ENDIF
	794	ELSE ! we are in write mode so we
	795	clname = cltmpn ! get back the file name without the cpu number
	796	ENDIF
[2586]	797	ELSE
	798	IF( llwrt .AND. .NOT. ln_clobber ) THEN ! we stop as we want to write in a new file
	799	CALL ctl_stop( TRIM(clinfo), 'We want to write in a new file but '//TRIM(clname)//' already exists...' )
	800	istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
[4650]	801	ELSEIF( llwrt ) THEN ! the file exists and we are in write mode with permission to
	802	clname = cltmpn ! overwrite so get back the file name without the cpu number
[2586]	803	ENDIF
[679]	804	ENDIF
[544]	805	IF( istop == nstop ) THEN ! no error within this routine
[10425]	806	CALL iom_nf90_open( clname, kiomid, llwrt, llok, idompar, kdlev = kdlev )
[544]	807	ENDIF
	808	!
	809	END SUBROUTINE iom_open
	810
	811
	812	SUBROUTINE iom_close( kiomid )
	813	!!--------------------------------------------------------------------
	814	!! * SUBROUTINE iom_close *
	815	!!
	816	!! ** Purpose : close an input file, or all files opened by iom
	817	!!--------------------------------------------------------------------
[1131]	818	INTEGER, INTENT(inout), OPTIONAL :: kiomid ! iom identifier of the file to be closed
	819	! ! return 0 when file is properly closed
	820	! ! No argument: all files opened by iom are closed
[544]	821
	822	INTEGER :: jf ! dummy loop indices
	823	INTEGER :: i_s, i_e ! temporary integer
	824	CHARACTER(LEN=100) :: clinfo ! info character
	825	!---------------------------------------------------------------------
	826	!
	827	clinfo = ' iom_close ~~~ '
	828	IF( PRESENT(kiomid) ) THEN
	829	i_s = kiomid
	830	i_e = kiomid
	831	ELSE
	832	i_s = 1
	833	i_e = jpmax_files
	834	ENDIF
	835
	836	IF( i_s > 0 ) THEN
	837	DO jf = i_s, i_e
	838	IF( iom_file(jf)%nfid > 0 ) THEN
[10425]	839	CALL iom_nf90_close( jf )
[1131]	840	iom_file(jf)%nfid = 0 ! free the id
	841	IF( PRESENT(kiomid) ) kiomid = 0 ! return 0 as id to specify that the file was closed
[679]	842	IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file(jf)%name)//' ok'
[544]	843	ELSEIF( PRESENT(kiomid) ) THEN
	844	WRITE(ctmp1,*) '--->', kiomid
	845	CALL ctl_stop( TRIM(clinfo)//' Invalid file identifier', ctmp1 )
	846	ENDIF
	847	END DO
	848	ENDIF
	849	!
	850	END SUBROUTINE iom_close
	851
	852
[11223]	853	FUNCTION iom_varid ( kiomid, cdvar, kdimsz, kndims, lduld, ldstop )
[544]	854	!!-----------------------------------------------------------------------
	855	!! * FUNCTION iom_varid *
	856	!!
	857	!! ** Purpose : get the id of a variable in a file (return 0 if not found)
	858	!!-----------------------------------------------------------------------
	859	INTEGER , INTENT(in ) :: kiomid ! file Identifier
	860	CHARACTER(len=*) , INTENT(in ) :: cdvar ! name of the variable
[9540]	861	INTEGER, DIMENSION(:), INTENT( out), OPTIONAL :: kdimsz ! size of each dimension
[11223]	862	INTEGER , INTENT( out), OPTIONAL :: kndims ! number of dimensions
	863	LOGICAL , INTENT( out), OPTIONAL :: lduld ! true if the last dimension is unlimited (time)
[745]	864	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if looking for non-existing variable (default = .TRUE.)
[544]	865	!
	866	INTEGER :: iom_varid, iiv, i_nvd
	867	LOGICAL :: ll_fnd
	868	CHARACTER(LEN=100) :: clinfo ! info character
[745]	869	LOGICAL :: llstop ! local definition of ldstop
[544]	870	!!-----------------------------------------------------------------------
	871	iom_varid = 0 ! default definition
[745]	872	! do we call ctl_stop if we look for non-existing variable?
	873	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	874	ELSE ; llstop = .TRUE.
	875	ENDIF
[544]	876	!
	877	IF( kiomid > 0 ) THEN
[679]	878	clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar)
[544]	879	IF( iom_file(kiomid)%nfid == 0 ) THEN
	880	CALL ctl_stop( trim(clinfo), 'the file is not open' )
	881	ELSE
	882	ll_fnd = .FALSE.
	883	iiv = 0
	884	!
	885	DO WHILE ( .NOT.ll_fnd .AND. iiv < iom_file(kiomid)%nvars )
	886	iiv = iiv + 1
	887	ll_fnd = ( TRIM(cdvar) == TRIM(iom_file(kiomid)%cn_var(iiv)) )
	888	END DO
	889	!
	890	IF( .NOT.ll_fnd ) THEN
	891	iiv = iiv + 1
	892	IF( iiv <= jpmax_vars ) THEN
[11223]	893	iom_varid = iom_nf90_varid( kiomid, cdvar, iiv, kdimsz, kndims, lduld )
[544]	894	ELSE
	895	CALL ctl_stop( trim(clinfo), 'Too many variables in the file '//iom_file(kiomid)%name, &
[10425]	896	& 'increase the parameter jpmax_vars')
[544]	897	ENDIF
[745]	898	IF( llstop .AND. iom_varid == -1 ) CALL ctl_stop( TRIM(clinfo)//' not found' )
[544]	899	ELSE
	900	iom_varid = iiv
	901	IF( PRESENT(kdimsz) ) THEN
	902	i_nvd = iom_file(kiomid)%ndims(iiv)
[9540]	903	IF( i_nvd <= size(kdimsz) ) THEN
	904	kdimsz(1:i_nvd) = iom_file(kiomid)%dimsz(1:i_nvd,iiv)
[544]	905	ELSE
	906	WRITE(ctmp1,*) i_nvd, size(kdimsz)
	907	CALL ctl_stop( trim(clinfo), 'error in kdimsz size'//trim(ctmp1) )
	908	ENDIF
	909	ENDIF
[4205]	910	IF( PRESENT(kndims) ) kndims = iom_file(kiomid)%ndims(iiv)
[11223]	911	IF( PRESENT( lduld) ) lduld = iom_file(kiomid)%luld( iiv)
[544]	912	ENDIF
	913	ENDIF
	914	ENDIF
	915	!
	916	END FUNCTION iom_varid
	917
	918
	919	!!----------------------------------------------------------------------
	920	!! INTERFACE iom_get
	921	!!----------------------------------------------------------------------
[9367]	922	SUBROUTINE iom_g0d( kiomid, cdvar, pvar, ktime, ldxios )
[544]	923	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	924	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	925	REAL(wp) , INTENT( out) :: pvar ! read field
[4245]	926	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
[9367]	927	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use xios to read restart
[544]	928	!
[4245]	929	INTEGER :: idvar ! variable id
	930	INTEGER :: idmspc ! number of spatial dimensions
	931	INTEGER , DIMENSION(1) :: itime ! record number
	932	CHARACTER(LEN=100) :: clinfo ! info character
	933	CHARACTER(LEN=100) :: clname ! file name
	934	CHARACTER(LEN=1) :: cldmspc !
[9367]	935	LOGICAL :: llxios
[544]	936	!
[9367]	937	llxios = .FALSE.
	938	IF( PRESENT(ldxios) ) llxios = ldxios
	939
	940	IF(.NOT.llxios) THEN ! read data using default library
	941	itime = 1
	942	IF( PRESENT(ktime) ) itime = ktime
	943	!
	944	clname = iom_file(kiomid)%name
	945	clinfo = ' iom_g0d, file: '//trim(clname)//', var: '//trim(cdvar)
	946	!
	947	IF( kiomid > 0 ) THEN
	948	idvar = iom_varid( kiomid, cdvar )
	949	IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN
	950	idmspc = iom_file ( kiomid )%ndims( idvar )
	951	IF( iom_file(kiomid)%luld(idvar) ) idmspc = idmspc - 1
	952	WRITE(cldmspc , fmt='(i1)') idmspc
	953	IF( idmspc > 0 ) CALL ctl_stop( TRIM(clinfo), 'When reading to a 0D array, we do not accept data', &
	954	& 'with 1 or more spatial dimensions: '//cldmspc//' were found.' , &
	955	& 'Use ncwa -a to suppress the unnecessary dimensions' )
[10425]	956	CALL iom_nf90_get( kiomid, idvar, pvar, itime )
[9367]	957	ENDIF
[679]	958	ENDIF
[9367]	959	ELSE
[9535]	960	#if defined key_iomput
[9367]	961	IF(lwp) WRITE(numout,*) 'XIOS RST READ (0D): ', trim(cdvar)
	962	CALL iom_swap( TRIM(crxios_context) )
	963	CALL xios_recv_field( trim(cdvar), pvar)
	964	CALL iom_swap( TRIM(cxios_context) )
[9535]	965	#else
[10425]	966	WRITE(ctmp1,*) 'Can not use XIOS in iom_g0d, file: '//trim(clname)//', var:'//trim(cdvar)
	967	CALL ctl_stop( 'iom_g0d', ctmp1 )
[9535]	968	#endif
[679]	969	ENDIF
[550]	970	END SUBROUTINE iom_g0d
[544]	971
[9367]	972	SUBROUTINE iom_g1d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, ldxios )
[544]	973	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	974	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	975	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	976	REAL(wp) , INTENT( out), DIMENSION(:) :: pvar ! read field
	977	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	978	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kstart ! start axis position of the reading
	979	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kcount ! number of points in each axis
[9367]	980	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	981	!
[679]	982	IF( kiomid > 0 ) THEN
	983	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, &
[9367]	984	& ktime=ktime, kstart=kstart, kcount=kcount, &
	985	& ldxios=ldxios )
[679]	986	ENDIF
[550]	987	END SUBROUTINE iom_g1d
[544]	988
[9367]	989	SUBROUTINE iom_g2d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios)
[544]	990	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	991	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	992	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	993	REAL(wp) , INTENT( out), DIMENSION(:,:) :: pvar ! read field
	994	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	995	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kstart ! start axis position of the reading
	996	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kcount ! number of points in each axis
[5118]	997	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	998	! look for and use a file attribute
	999	! called open_ocean_jstart to set the start
	1000	! value for the 2nd dimension (netcdf only)
[9367]	1001	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1002	!
[679]	1003	IF( kiomid > 0 ) THEN
	1004	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, &
[5118]	1005	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1006	& lrowattr=lrowattr, ldxios=ldxios)
[679]	1007	ENDIF
[550]	1008	END SUBROUTINE iom_g2d
[544]	1009
[9367]	1010	SUBROUTINE iom_g3d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios )
[544]	1011	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1012	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1013	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1014	REAL(wp) , INTENT( out), DIMENSION(:,:,:) :: pvar ! read field
	1015	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1016	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kstart ! start axis position of the reading
	1017	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1018	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1019	! look for and use a file attribute
	1020	! called open_ocean_jstart to set the start
	1021	! value for the 2nd dimension (netcdf only)
[9367]	1022	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1023	!
[679]	1024	IF( kiomid > 0 ) THEN
	1025	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, &
[5118]	1026	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1027	& lrowattr=lrowattr, ldxios=ldxios )
[679]	1028	ENDIF
[550]	1029	END SUBROUTINE iom_g3d
[544]	1030	!!----------------------------------------------------------------------
	1031
	1032	SUBROUTINE iom_get_123d( kiomid, kdom , cdvar , &
[679]	1033	& pv_r1d, pv_r2d, pv_r3d, &
[5118]	1034	& ktime , kstart, kcount, &
[9367]	1035	& lrowattr, ldxios )
[544]	1036	!!-----------------------------------------------------------------------
	1037	!! * ROUTINE iom_get_123d *
	1038	!!
	1039	!! ** Purpose : read a 1D/2D/3D variable
	1040	!!
	1041	!! ** Method : read ONE record at each CALL
	1042	!!-----------------------------------------------------------------------
	1043	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1044	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1045	CHARACTER(len=*) , INTENT(in ) :: cdvar ! Name of the variable
	1046	REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case)
	1047	REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case)
	1048	REAL(wp), DIMENSION(:,:,:) , INTENT( out), OPTIONAL :: pv_r3d ! read field (3D case)
	1049	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
	1050	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kstart ! start position of the reading in each axis
	1051	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kcount ! number of points to be read in each axis
[5118]	1052	LOGICAL , INTENT(in ), OPTIONAL :: lrowattr ! logical flag telling iom_get to
[9367]	1053	! look for and use a file attribute
	1054	! called open_ocean_jstart to set the start
	1055	! value for the 2nd dimension (netcdf only)
	1056	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use XIOS to read restart
[544]	1057	!
[9367]	1058	LOGICAL :: llxios ! local definition for XIOS read
[1200]	1059	LOGICAL :: llnoov ! local definition to read overlap
[5118]	1060	LOGICAL :: luse_jattr ! local definition to read open_ocean_jstart file attribute
	1061	INTEGER :: jstartrow ! start point for 2nd dimension optionally set by file attribute
[544]	1062	INTEGER :: jl ! loop on number of dimension
	1063	INTEGER :: idom ! type of domain
	1064	INTEGER :: idvar ! id of the variable
	1065	INTEGER :: inbdim ! number of dimensions of the variable
	1066	INTEGER :: idmspc ! number of spatial dimensions
	1067	INTEGER :: itime ! record number
	1068	INTEGER :: istop ! temporary value of nstop
[679]	1069	INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes
	1070	INTEGER :: ji, jj ! loop counters
[5118]	1071	INTEGER :: irankpv !
[679]	1072	INTEGER :: ind1, ind2 ! substring index
[544]	1073	INTEGER, DIMENSION(jpmax_dims) :: istart ! starting point to read for each axis
	1074	INTEGER, DIMENSION(jpmax_dims) :: icnt ! number of value to read along each axis
	1075	INTEGER, DIMENSION(jpmax_dims) :: idimsz ! size of the dimensions of the variable
[679]	1076	INTEGER, DIMENSION(jpmax_dims) :: ishape ! size of the dimensions of the variable
[544]	1077	REAL(wp) :: zscf, zofs ! sacle_factor and add_offset
	1078	INTEGER :: itmp ! temporary integer
[4148]	1079	CHARACTER(LEN=256) :: clinfo ! info character
	1080	CHARACTER(LEN=256) :: clname ! file name
[679]	1081	CHARACTER(LEN=1) :: clrankpv, cldmspc !
[6140]	1082	LOGICAL :: ll_depth_spec ! T => if kstart, kcount present then only use values for 3rd spatial dimension.
[9019]	1083	INTEGER :: inlev ! number of levels for 3D data
[9367]	1084	REAL(wp) :: gma, gmi
[544]	1085	!---------------------------------------------------------------------
	1086	!
[9019]	1087	inlev = -1
	1088	IF( PRESENT(pv_r3d) ) inlev = SIZE(pv_r3d, 3)
[9367]	1089	!
	1090	llxios = .FALSE.
	1091	if(PRESENT(ldxios)) llxios = ldxios
	1092	idvar = iom_varid( kiomid, cdvar )
[544]	1093	idom = kdom
[9367]	1094	!
	1095	IF(.NOT.llxios) THEN
	1096	clname = iom_file(kiomid)%name ! esier to read
	1097	clinfo = ' iom_get_123d, file: '//trim(clname)//', var: '//trim(cdvar)
	1098	! local definition of the domain ?
	1099	! do we read the overlap
	1100	! ugly patch SM+JMM+RB to overwrite global definition in some cases
	1101	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
	1102	! check kcount and kstart optionals parameters...
	1103	IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) CALL ctl_stop(trim(clinfo), 'kcount present needs kstart present')
	1104	IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) CALL ctl_stop(trim(clinfo), 'kstart present needs kcount present')
	1105	IF( PRESENT(kstart) .AND. idom /= jpdom_unknown .AND. idom /= jpdom_autoglo_xy ) &
	1106	& CALL ctl_stop(trim(clinfo), 'kstart present needs kdom = jpdom_unknown or kdom = jpdom_autoglo_xy')
[544]	1107
[9367]	1108	luse_jattr = .false.
	1109	IF( PRESENT(lrowattr) ) THEN
	1110	IF( lrowattr .AND. idom /= jpdom_data ) CALL ctl_stop(trim(clinfo), 'lrowattr present and true needs kdom = jpdom_data')
	1111	IF( lrowattr .AND. idom == jpdom_data ) luse_jattr = .true.
[6140]	1112	ENDIF
[679]	1113
[9367]	1114	! Search for the variable in the data base (eventually actualize data)
	1115	istop = nstop
[544]	1116	!
[9367]	1117	IF( idvar > 0 ) THEN
	1118	! to write iom_file(kiomid)%dimsz in a shorter way !
	1119	idimsz(:) = iom_file(kiomid)%dimsz(:, idvar)
	1120	inbdim = iom_file(kiomid)%ndims(idvar) ! number of dimensions in the file
	1121	idmspc = inbdim ! number of spatial dimensions in the file
	1122	IF( iom_file(kiomid)%luld(idvar) ) idmspc = inbdim - 1
	1123	IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), 'the file has more than 3 spatial dimensions this case is not coded...')
	1124	!
	1125	! update idom definition...
	1126	! Identify the domain in case of jpdom_auto(glo/dta) definition
	1127	IF( idom == jpdom_autoglo_xy ) THEN
	1128	ll_depth_spec = .TRUE.
	1129	idom = jpdom_autoglo
	1130	ELSE
	1131	ll_depth_spec = .FALSE.
	1132	ENDIF
	1133	IF( idom == jpdom_autoglo .OR. idom == jpdom_autodta ) THEN
	1134	IF( idom == jpdom_autoglo ) THEN ; idom = jpdom_global
	1135	ELSE ; idom = jpdom_data
[544]	1136	ENDIF
[9367]	1137	ind1 = INDEX( clname, '_', back = .TRUE. ) + 1
	1138	ind2 = INDEX( clname, '.', back = .TRUE. ) - 1
	1139	IF( ind2 > ind1 ) THEN ; IF( VERIFY( clname(ind1:ind2), '0123456789' ) == 0 ) idom = jpdom_local ; ENDIF
	1140	ENDIF
	1141	! Identify the domain in case of jpdom_local definition
	1142	IF( idom == jpdom_local ) THEN
	1143	IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN ; idom = jpdom_local_full
	1144	ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN ; idom = jpdom_local_noextra
	1145	ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN ; idom = jpdom_local_noovlap
	1146	ELSE ; CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' )
	1147	ENDIF
	1148	ENDIF
	1149	!
	1150	! check the consistency between input array and data rank in the file
	1151	!
	1152	! initializations
	1153	itime = 1
	1154	IF( PRESENT(ktime) ) itime = ktime
	1155	!
	1156	irankpv = 1 * COUNT( (/PRESENT(pv_r1d)/) ) + 2 * COUNT( (/PRESENT(pv_r2d)/) ) + 3 * COUNT( (/PRESENT(pv_r3d)/) )
	1157	WRITE(clrankpv, fmt='(i1)') irankpv
	1158	WRITE(cldmspc , fmt='(i1)') idmspc
	1159	!
[11857]	1160	!!GS: we consider 2D data as 3D data with vertical dim size = 1
	1161	!IF( idmspc < irankpv ) THEN
	1162	! CALL ctl_stop( TRIM(clinfo), 'The file has only '//cldmspc//' spatial dimension', &
	1163	! & 'it is impossible to read a '//clrankpv//'D array from this file...' )
	1164	!ELSEIF( idmspc == irankpv ) THEN
	1165	IF( idmspc == irankpv ) THEN
[9367]	1166	IF( PRESENT(pv_r1d) .AND. idom /= jpdom_unknown ) &
	1167	& CALL ctl_stop( TRIM(clinfo), 'case not coded...You must use jpdom_unknown' )
	1168	ELSEIF( idmspc > irankpv ) THEN
	1169	IF( PRESENT(pv_r2d) .AND. itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN
	1170	CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...' , &
	1171	& 'As the size of the z dimension is 1 and as we try to read the first record, ', &
	1172	& 'we accept this case, even if there is a possible mix-up between z and time dimension' )
	1173	idmspc = idmspc - 1
	1174	ELSE
	1175	CALL ctl_stop( TRIM(clinfo), 'To keep iom lisibility, when reading a '//clrankpv//'D array,' , &
	1176	& 'we do not accept data with '//cldmspc//' spatial dimensions', &
	1177	& 'Use ncwa -a to suppress the unnecessary dimensions' )
	1178	ENDIF
	1179	ENDIF
	1180	!
	1181	! definition of istart and icnt
	1182	!
	1183	icnt (:) = 1
	1184	istart(:) = 1
	1185	istart(idmspc+1) = itime
	1186
	1187	IF( PRESENT(kstart) .AND. .NOT. ll_depth_spec ) THEN
	1188	istart(1:idmspc) = kstart(1:idmspc)
	1189	icnt (1:idmspc) = kcount(1:idmspc)
	1190	ELSE
	1191	IF(idom == jpdom_unknown ) THEN
	1192	icnt(1:idmspc) = idimsz(1:idmspc)
	1193	ELSE
	1194	IF( .NOT. PRESENT(pv_r1d) ) THEN ! not a 1D array
	1195	IF( idom == jpdom_data ) THEN
	1196	jstartrow = 1
	1197	IF( luse_jattr ) THEN
	1198	CALL iom_getatt(kiomid, 'open_ocean_jstart', jstartrow ) ! -999 is returned if the attribute is not found
	1199	jstartrow = MAX(1,jstartrow)
	1200	ENDIF
	1201	istart(1:2) = (/ mig(1), mjg(1) + jstartrow - 1 /) ! icnt(1:2) done below
	1202	ELSEIF( idom == jpdom_global ) THEN ; istart(1:2) = (/ nimpp , njmpp /) ! icnt(1:2) done below
[5118]	1203	ENDIF
[9367]	1204	! we do not read the overlap -> we start to read at nldi, nldj
[679]	1205	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1206	! IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[9367]	1207	IF( llnoov .AND. idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[679]	1208	! we do not read the overlap and the extra-halos -> from nldi to nlei and from nldj to nlej
	1209	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1210	! icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
[9367]	1211	IF( llnoov ) THEN ; icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	1212	ELSE ; icnt(1:2) = (/ nlci , nlcj /)
[544]	1213	ENDIF
[9367]	1214	IF( PRESENT(pv_r3d) ) THEN
	1215	IF( idom == jpdom_data ) THEN ; icnt(3) = inlev
	1216	ELSEIF( ll_depth_spec .AND. PRESENT(kstart) ) THEN ; istart(3) = kstart(3) ; icnt(3) = kcount(3)
	1217	ELSE ; icnt(3) = inlev
	1218	ENDIF
	1219	ENDIF
[544]	1220	ENDIF
	1221	ENDIF
[679]	1222	ENDIF
[544]	1223
[9367]	1224	! check that istart and icnt can be used with this file
	1225	!-
	1226	DO jl = 1, jpmax_dims
	1227	itmp = istart(jl)+icnt(jl)-1
	1228	IF( itmp > idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN
	1229	WRITE( ctmp1, FMT="('(istart(', i1, ') + icnt(', i1, ') - 1) = ', i5)" ) jl, jl, itmp
	1230	WRITE( ctmp2, FMT="(' is larger than idimsz(', i1,') = ', i5)" ) jl, idimsz(jl)
	1231	CALL ctl_stop( trim(clinfo), 'start and count too big regarding to the size of the data, ', ctmp1, ctmp2 )
	1232	ENDIF
	1233	END DO
[544]	1234
[9367]	1235	! check that icnt matches the input array
	1236	!-
	1237	IF( idom == jpdom_unknown ) THEN
	1238	IF( irankpv == 1 ) ishape(1:1) = SHAPE(pv_r1d)
	1239	IF( irankpv == 2 ) ishape(1:2) = SHAPE(pv_r2d)
	1240	IF( irankpv == 3 ) ishape(1:3) = SHAPE(pv_r3d)
	1241	ctmp1 = 'd'
	1242	ELSE
	1243	IF( irankpv == 2 ) THEN
[679]	1244	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1245	! ishape(1:2) = SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1 = 'd(nldi:nlei,nldj:nlej)'
[9367]	1246	IF( llnoov ) THEN ; ishape(1:2)=SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1='d(nldi:nlei,nldj:nlej)'
	1247	ELSE ; ishape(1:2)=SHAPE(pv_r2d(1 :nlci,1 :nlcj )) ; ctmp1='d(1:nlci,1:nlcj)'
	1248	ENDIF
[544]	1249	ENDIF
[9367]	1250	IF( irankpv == 3 ) THEN
[679]	1251	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1252	! ishape(1:3) = SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1 = 'd(nldi:nlei,nldj:nlej,:)'
[9367]	1253	IF( llnoov ) THEN ; ishape(1:3)=SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1='d(nldi:nlei,nldj:nlej,:)'
	1254	ELSE ; ishape(1:3)=SHAPE(pv_r3d(1 :nlci,1 :nlcj,:)) ; ctmp1='d(1:nlci,1:nlcj,:)'
	1255	ENDIF
[544]	1256	ENDIF
[679]	1257	ENDIF
	1258
[9367]	1259	DO jl = 1, irankpv
	1260	WRITE( ctmp2, FMT="(', ', i1,'): ', i5,' /= icnt(', i1,'):', i5)" ) jl, ishape(jl), jl, icnt(jl)
	1261	IF( ishape(jl) /= icnt(jl) ) CALL ctl_stop( TRIM(clinfo), 'size(pv_r'//clrankpv//TRIM(ctmp1)//TRIM(ctmp2) )
	1262	END DO
[679]	1263
[9367]	1264	ENDIF
[544]	1265
[9367]	1266	! read the data
	1267	!-
	1268	IF( idvar > 0 .AND. istop == nstop ) THEN ! no additional errors until this point...
	1269	!
[679]	1270	! find the right index of the array to be read
	1271	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1272	! IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1273	! ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1274	! ENDIF
[9367]	1275	IF( llnoov ) THEN
	1276	IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1277	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1278	ENDIF
	1279	ELSE
	1280	IF( idom /= jpdom_unknown ) THEN ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj
	1281	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1282	ENDIF
[679]	1283	ENDIF
	1284
[10425]	1285	CALL iom_nf90_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, pv_r1d, pv_r2d, pv_r3d )
[679]	1286
[9367]	1287	IF( istop == nstop ) THEN ! no additional errors until this point...
	1288	IF(lwp) WRITE(numout,"(10x,' read ',a,' (rec: ',i6,') in ',a,' ok')") TRIM(cdvar), itime, TRIM(iom_file(kiomid)%name)
	1289
	1290	!--- overlap areas and extra hallows (mpp)
	1291	IF( PRESENT(pv_r2d) .AND. idom /= jpdom_unknown ) THEN
[11192]	1292	CALL lbc_lnk( 'iom', pv_r2d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1293	ELSEIF( PRESENT(pv_r3d) .AND. idom /= jpdom_unknown ) THEN
	1294	! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension
	1295	IF( icnt(3) == inlev ) THEN
[11192]	1296	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1297	ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...)
	1298	DO jj = nlcj+1, jpj ; pv_r3d(1:nlci, jj, :) = pv_r3d(1:nlci, nlej, :) ; END DO
	1299	DO ji = nlci+1, jpi ; pv_r3d(ji , : , :) = pv_r3d(nlei , : , :) ; END DO
	1300	ENDIF
[679]	1301	ENDIF
[9367]	1302	!
	1303	ELSE
	1304	! return if istop == nstop is false
	1305	RETURN
[679]	1306	ENDIF
[9367]	1307	ELSE
	1308	! return if statment idvar > 0 .AND. istop == nstop is false
	1309	RETURN
	1310	ENDIF
	1311	!
	1312	ELSE ! read using XIOS. Only if KEY_IOMPUT is defined
	1313	#if defined key_iomput
	1314	!would be good to be able to check which context is active and swap only if current is not restart
	1315	CALL iom_swap( TRIM(crxios_context) )
	1316	IF( PRESENT(pv_r3d) ) THEN
[9535]	1317	pv_r3d(:, :, :) = 0.
[9367]	1318	if(lwp) write(numout,*) 'XIOS RST READ (3D): ',trim(cdvar)
	1319	CALL xios_recv_field( trim(cdvar), pv_r3d)
	1320	IF(idom /= jpdom_unknown ) then
[11192]	1321	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing)
[679]	1322	ENDIF
[9367]	1323	ELSEIF( PRESENT(pv_r2d) ) THEN
[9535]	1324	pv_r2d(:, :) = 0.
[9367]	1325	if(lwp) write(numout,*) 'XIOS RST READ (2D): ', trim(cdvar)
	1326	CALL xios_recv_field( trim(cdvar), pv_r2d)
	1327	IF(idom /= jpdom_unknown ) THEN
[11192]	1328	CALL lbc_lnk('iom', pv_r2d,'Z',-999., kfillmode = jpfillnothing)
[9367]	1329	ENDIF
	1330	ELSEIF( PRESENT(pv_r1d) ) THEN
[9535]	1331	pv_r1d(:) = 0.
[9367]	1332	if(lwp) write(numout,*) 'XIOS RST READ (1D): ', trim(cdvar)
	1333	CALL xios_recv_field( trim(cdvar), pv_r1d)
[544]	1334	ENDIF
[9367]	1335	CALL iom_swap( TRIM(cxios_context) )
	1336	#else
	1337	istop = istop + 1
	1338	clinfo = 'Can not use XIOS in iom_get_123d, file: '//trim(clname)//', var:'//trim(cdvar)
	1339	#endif
[544]	1340	ENDIF
[9367]	1341	!some final adjustments
	1342	! C1D case : always call lbc_lnk to replicate the central value over the whole 3X3 domain
[10425]	1343	IF( lk_c1d .AND. PRESENT(pv_r2d) ) CALL lbc_lnk( 'iom', pv_r2d,'Z',1. )
	1344	IF( lk_c1d .AND. PRESENT(pv_r3d) ) CALL lbc_lnk( 'iom', pv_r3d,'Z',1. )
[9367]	1345
	1346	!--- Apply scale_factor and offset
	1347	zscf = iom_file(kiomid)%scf(idvar) ! scale factor
	1348	zofs = iom_file(kiomid)%ofs(idvar) ! offset
	1349	IF( PRESENT(pv_r1d) ) THEN
	1350	IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf
	1351	IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs
	1352	ELSEIF( PRESENT(pv_r2d) ) THEN
	1353	IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf
	1354	IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs
	1355	ELSEIF( PRESENT(pv_r3d) ) THEN
	1356	IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf
	1357	IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs
	1358	ENDIF
[544]	1359	!
	1360	END SUBROUTINE iom_get_123d
	1361
	1362
[10522]	1363	FUNCTION iom_getszuld ( kiomid )
	1364	!!-----------------------------------------------------------------------
	1365	!! * FUNCTION iom_getszuld *
[544]	1366	!!
[10522]	1367	!! ** Purpose : get the size of the unlimited dimension in a file
	1368	!! (return -1 if not found)
	1369	!!-----------------------------------------------------------------------
	1370	INTEGER, INTENT(in ) :: kiomid ! file Identifier
[544]	1371	!
[10522]	1372	INTEGER :: iom_getszuld
	1373	!!-----------------------------------------------------------------------
	1374	iom_getszuld = -1
[679]	1375	IF( kiomid > 0 ) THEN
[10523]	1376	IF( iom_file(kiomid)%iduld > 0 ) iom_getszuld = iom_file(kiomid)%lenuld
[544]	1377	ENDIF
[10522]	1378	END FUNCTION iom_getszuld
	1379
[544]	1380
	1381	!!----------------------------------------------------------------------
[10425]	1382	!! INTERFACE iom_chkatt
[2528]	1383	!!----------------------------------------------------------------------
[10425]	1384	SUBROUTINE iom_chkatt( kiomid, cdatt, llok, ksize, cdvar )
[2528]	1385	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1386	CHARACTER(len=*), INTENT(in ) :: cdatt ! Name of the attribute
[10425]	1387	LOGICAL , INTENT( out) :: llok ! Error code
	1388	INTEGER , INTENT( out), OPTIONAL :: ksize ! Size of the attribute array
[7646]	1389	CHARACTER(len=*), INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[2528]	1390	!
	1391	IF( kiomid > 0 ) THEN
[10425]	1392	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_chkatt( kiomid, cdatt, llok, ksize=ksize, cdvar=cdvar )
[2528]	1393	ENDIF
[10425]	1394	!
	1395	END SUBROUTINE iom_chkatt
	1396
	1397	!!----------------------------------------------------------------------
	1398	!! INTERFACE iom_getatt
	1399	!!----------------------------------------------------------------------
	1400	SUBROUTINE iom_g0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1401	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1402	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1403	INTEGER , INTENT( out) :: katt0d ! read field
	1404	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1405	!
	1406	IF( kiomid > 0 ) THEN
	1407	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
	1408	ENDIF
[7646]	1409	END SUBROUTINE iom_g0d_iatt
[2528]	1410
[10425]	1411	SUBROUTINE iom_g1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1412	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1413	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1414	INTEGER, DIMENSION(:) , INTENT( out) :: katt1d ! read field
	1415	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1416	!
	1417	IF( kiomid > 0 ) THEN
[10425]	1418	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1419	ENDIF
[10425]	1420	END SUBROUTINE iom_g1d_iatt
	1421
	1422	SUBROUTINE iom_g0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1423	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1424	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1425	REAL(wp) , INTENT( out) :: patt0d ! read field
	1426	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1427	!
	1428	IF( kiomid > 0 ) THEN
	1429	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1430	ENDIF
[7646]	1431	END SUBROUTINE iom_g0d_ratt
[2528]	1432
[10425]	1433	SUBROUTINE iom_g1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1434	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1435	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1436	REAL(wp), DIMENSION(:), INTENT( out) :: patt1d ! read field
	1437	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1438	!
	1439	IF( kiomid > 0 ) THEN
[10425]	1440	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1441	ENDIF
[10425]	1442	END SUBROUTINE iom_g1d_ratt
	1443
	1444	SUBROUTINE iom_g0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1445	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1446	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1447	CHARACTER(len=*) , INTENT( out) :: cdatt0d ! read field
	1448	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1449	!
	1450	IF( kiomid > 0 ) THEN
	1451	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1452	ENDIF
[7646]	1453	END SUBROUTINE iom_g0d_catt
	1454
[10425]	1455
[2528]	1456	!!----------------------------------------------------------------------
[7646]	1457	!! INTERFACE iom_putatt
	1458	!!----------------------------------------------------------------------
[10425]	1459	SUBROUTINE iom_p0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1460	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1461	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1462	INTEGER , INTENT(in ) :: katt0d ! written field
	1463	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1464	!
	1465	IF( kiomid > 0 ) THEN
[10425]	1466	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
[7646]	1467	ENDIF
	1468	END SUBROUTINE iom_p0d_iatt
	1469
[10425]	1470	SUBROUTINE iom_p1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1471	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1472	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1473	INTEGER, DIMENSION(:) , INTENT(in ) :: katt1d ! written field
	1474	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1475	!
	1476	IF( kiomid > 0 ) THEN
[10425]	1477	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1478	ENDIF
[10425]	1479	END SUBROUTINE iom_p1d_iatt
	1480
	1481	SUBROUTINE iom_p0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1482	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1483	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1484	REAL(wp) , INTENT(in ) :: patt0d ! written field
	1485	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1486	!
	1487	IF( kiomid > 0 ) THEN
	1488	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1489	ENDIF
[7646]	1490	END SUBROUTINE iom_p0d_ratt
	1491
[10425]	1492	SUBROUTINE iom_p1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1493	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1494	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1495	REAL(wp), DIMENSION(:), INTENT(in ) :: patt1d ! written field
	1496	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1497	!
	1498	IF( kiomid > 0 ) THEN
[10425]	1499	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1500	ENDIF
[10425]	1501	END SUBROUTINE iom_p1d_ratt
	1502
	1503	SUBROUTINE iom_p0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1504	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1505	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1506	CHARACTER(len=*) , INTENT(in ) :: cdatt0d ! written field
	1507	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1508	!
	1509	IF( kiomid > 0 ) THEN
	1510	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1511	ENDIF
[7646]	1512	END SUBROUTINE iom_p0d_catt
	1513
[10425]	1514
[7646]	1515	!!----------------------------------------------------------------------
[544]	1516	!! INTERFACE iom_rstput
	1517	!!----------------------------------------------------------------------
[9367]	1518	SUBROUTINE iom_rp0d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1519	INTEGER , INTENT(in) :: kt ! ocean time-step
	1520	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1521	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1522	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[556]	1523	REAL(wp) , INTENT(in) :: pvar ! written field
[544]	1524	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1525	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1526	LOGICAL :: llx ! local xios write flag
[544]	1527	INTEGER :: ivid ! variable id
[9367]	1528
	1529	llx = .FALSE.
	1530	IF(PRESENT(ldxios)) llx = ldxios
	1531	IF( llx ) THEN
	1532	#ifdef key_iomput
	1533	IF( kt == kwrite ) THEN
	1534	IF(lwp) write(numout,*) 'RESTART: write (XIOS 0D) ',trim(cdvar)
	1535	CALL xios_send_field(trim(cdvar), pvar)
	1536	ENDIF
	1537	#endif
	1538	ELSE
	1539	IF( kiomid > 0 ) THEN
	1540	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1541	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1542	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar )
[9367]	1543	ENDIF
[679]	1544	ENDIF
	1545	ENDIF
[550]	1546	END SUBROUTINE iom_rp0d
[544]	1547
[9367]	1548	SUBROUTINE iom_rp1d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1549	INTEGER , INTENT(in) :: kt ! ocean time-step
	1550	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1551	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1552	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1553	REAL(wp) , INTENT(in), DIMENSION( :) :: pvar ! written field
[544]	1554	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1555	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1556	LOGICAL :: llx ! local xios write flag
[544]	1557	INTEGER :: ivid ! variable id
[9367]	1558
	1559	llx = .FALSE.
	1560	IF(PRESENT(ldxios)) llx = ldxios
	1561	IF( llx ) THEN
	1562	#ifdef key_iomput
	1563	IF( kt == kwrite ) THEN
	1564	IF(lwp) write(numout,*) 'RESTART: write (XIOS 1D) ',trim(cdvar)
	1565	CALL xios_send_field(trim(cdvar), pvar)
	1566	ENDIF
	1567	#endif
	1568	ELSE
	1569	IF( kiomid > 0 ) THEN
	1570	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1571	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1572	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar )
[9367]	1573	ENDIF
[679]	1574	ENDIF
	1575	ENDIF
[550]	1576	END SUBROUTINE iom_rp1d
[544]	1577
[9367]	1578	SUBROUTINE iom_rp2d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1579	INTEGER , INTENT(in) :: kt ! ocean time-step
	1580	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1581	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1582	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1583	REAL(wp) , INTENT(in), DIMENSION(:, : ) :: pvar ! written field
[544]	1584	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1585	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1586	LOGICAL :: llx
[544]	1587	INTEGER :: ivid ! variable id
[9367]	1588
	1589	llx = .FALSE.
	1590	IF(PRESENT(ldxios)) llx = ldxios
	1591	IF( llx ) THEN
	1592	#ifdef key_iomput
	1593	IF( kt == kwrite ) THEN
	1594	IF(lwp) write(numout,*) 'RESTART: write (XIOS 2D) ',trim(cdvar)
	1595	CALL xios_send_field(trim(cdvar), pvar)
	1596	ENDIF
	1597	#endif
	1598	ELSE
	1599	IF( kiomid > 0 ) THEN
	1600	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1601	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1602	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar )
[9367]	1603	ENDIF
[679]	1604	ENDIF
	1605	ENDIF
[550]	1606	END SUBROUTINE iom_rp2d
[544]	1607
[9367]	1608	SUBROUTINE iom_rp3d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1609	INTEGER , INTENT(in) :: kt ! ocean time-step
	1610	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1611	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1612	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1613	REAL(wp) , INTENT(in), DIMENSION(:,:,:) :: pvar ! written field
[544]	1614	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1615	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1616	LOGICAL :: llx ! local xios write flag
[544]	1617	INTEGER :: ivid ! variable id
[9367]	1618
	1619	llx = .FALSE.
	1620	IF(PRESENT(ldxios)) llx = ldxios
	1621	IF( llx ) THEN
	1622	#ifdef key_iomput
	1623	IF( kt == kwrite ) THEN
	1624	IF(lwp) write(numout,*) 'RESTART: write (XIOS 3D) ',trim(cdvar)
	1625	CALL xios_send_field(trim(cdvar), pvar)
	1626	ENDIF
	1627	#endif
	1628	ELSE
	1629	IF( kiomid > 0 ) THEN
	1630	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1631	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1632	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar )
[9367]	1633	ENDIF
[679]	1634	ENDIF
	1635	ENDIF
[550]	1636	END SUBROUTINE iom_rp3d
[1359]	1637
	1638
[10425]	1639	SUBROUTINE iom_delay_rst( cdaction, cdcpnt, kncid )
	1640	!!---------------------------------------------------------------------
	1641	!! Routine iom_delay_rst: used read/write restart related to mpp_delay
	1642	!!
	1643	!!---------------------------------------------------------------------
	1644	CHARACTER(len=*), INTENT(in ) :: cdaction !
	1645	CHARACTER(len=*), INTENT(in ) :: cdcpnt
	1646	INTEGER , INTENT(in ) :: kncid
	1647	!
	1648	INTEGER :: ji
	1649	INTEGER :: indim
	1650	LOGICAL :: llattexist
	1651	REAL(wp), ALLOCATABLE, DIMENSION(:) :: zreal1d
	1652	!!---------------------------------------------------------------------
	1653	!
	1654	! ===================================
	1655	IF( TRIM(cdaction) == 'READ' ) THEN ! read restart related to mpp_delay !
	1656	! ===================================
	1657	DO ji = 1, nbdelay
	1658	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1659	CALL iom_chkatt( kncid, 'DELAY_'//c_delaylist(ji), llattexist, indim )
	1660	IF( llattexist ) THEN
	1661	ALLOCATE( todelay(ji)%z1d(indim) )
	1662	CALL iom_getatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1663	ndelayid(ji) = 0 ! set to 0 to specify that the value was read in the restart
	1664	ENDIF
	1665	ENDIF
	1666	END DO
	1667	! ====================================
	1668	ELSE ! write restart related to mpp_delay !
	1669	! ====================================
	1670	DO ji = 1, nbdelay ! save only ocean delayed global communication variables
	1671	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1672	IF( ASSOCIATED(todelay(ji)%z1d) ) THEN
	1673	CALL mpp_delay_rcv(ji) ! make sure %z1d is received
	1674	CALL iom_putatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1675	ENDIF
	1676	ENDIF
	1677	END DO
	1678	!
	1679	ENDIF
	1680
	1681	END SUBROUTINE iom_delay_rst
	1682
	1683
	1684
[544]	1685	!!----------------------------------------------------------------------
[1457]	1686	!! INTERFACE iom_put
[1359]	1687	!!----------------------------------------------------------------------
[1738]	1688	SUBROUTINE iom_p0d( cdname, pfield0d )
	1689	CHARACTER(LEN=*), INTENT(in) :: cdname
	1690	REAL(wp) , INTENT(in) :: pfield0d
[11413]	1691	!! REAL(wp) , DIMENSION(jpi,jpj) :: zz ! masson
[1738]	1692	#if defined key_iomput
[11413]	1693	!!clem zz(:,:)=pfield0d
	1694	!!clem CALL xios_send_field(cdname, zz)
	1695	CALL xios_send_field(cdname, (/pfield0d/))
[1738]	1696	#else
	1697	IF( .FALSE. ) WRITE(numout,*) cdname, pfield0d ! useless test to avoid compilation warnings
	1698	#endif
	1699	END SUBROUTINE iom_p0d
	1700
[3294]	1701	SUBROUTINE iom_p1d( cdname, pfield1d )
	1702	CHARACTER(LEN=*) , INTENT(in) :: cdname
	1703	REAL(wp), DIMENSION(:), INTENT(in) :: pfield1d
	1704	#if defined key_iomput
[3695]	1705	CALL xios_send_field( cdname, RESHAPE( (/pfield1d/), (/1,1,SIZE(pfield1d)/) ) )
[3294]	1706	#else
	1707	IF( .FALSE. ) WRITE(numout,*) cdname, pfield1d ! useless test to avoid compilation warnings
	1708	#endif
	1709	END SUBROUTINE iom_p1d
	1710
[1359]	1711	SUBROUTINE iom_p2d( cdname, pfield2d )
	1712	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1713	REAL(wp), DIMENSION(:,:), INTENT(in) :: pfield2d
[1412]	1714	#if defined key_iomput
[3695]	1715	CALL xios_send_field(cdname, pfield2d)
[1520]	1716	#else
	1717	IF( .FALSE. ) WRITE(numout,*) cdname, pfield2d ! useless test to avoid compilation warnings
[1359]	1718	#endif
	1719	END SUBROUTINE iom_p2d
[544]	1720
[1359]	1721	SUBROUTINE iom_p3d( cdname, pfield3d )
	1722	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1723	REAL(wp), DIMENSION(:,:,:), INTENT(in) :: pfield3d
[1412]	1724	#if defined key_iomput
[9019]	1725	CALL xios_send_field( cdname, pfield3d )
[1520]	1726	#else
	1727	IF( .FALSE. ) WRITE(numout,*) cdname, pfield3d ! useless test to avoid compilation warnings
[1359]	1728	#endif
	1729	END SUBROUTINE iom_p3d
[544]	1730
[1412]	1731	#if defined key_iomput
[9019]	1732	!!----------------------------------------------------------------------
[9802]	1733	!! 'key_iomput' XIOS interface
[9019]	1734	!!----------------------------------------------------------------------
[1359]	1735
[9930]	1736	SUBROUTINE iom_set_domain_attr( cdid, ni_glo, nj_glo, ibegin, jbegin, ni, nj, &
[5363]	1737	& data_dim, data_ibegin, data_ni, data_jbegin, data_nj, lonvalue, latvalue, mask, &
[5415]	1738	& nvertex, bounds_lon, bounds_lat, area )
[9019]	1739	!!----------------------------------------------------------------------
	1740	!!----------------------------------------------------------------------
	1741	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1742	INTEGER , OPTIONAL, INTENT(in) :: ni_glo, nj_glo, ibegin, jbegin, ni, nj
	1743	INTEGER , OPTIONAL, INTENT(in) :: data_dim, data_ibegin, data_ni, data_jbegin, data_nj
[9930]	1744	INTEGER , OPTIONAL, INTENT(in) :: nvertex
[9019]	1745	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: lonvalue, latvalue
	1746	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds_lon, bounds_lat, area
	1747	LOGICAL , DIMENSION(:) , OPTIONAL, INTENT(in) :: mask
	1748	!!----------------------------------------------------------------------
	1749	!
	1750	IF( xios_is_valid_domain (cdid) ) THEN
[4148]	1751	CALL xios_set_domain_attr ( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1752	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1753	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1754	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear')
[9367]	1755	ENDIF
[9019]	1756	IF( xios_is_valid_domaingroup(cdid) ) THEN
[4148]	1757	CALL xios_set_domaingroup_attr( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1758	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1759	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1760	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear' )
[3695]	1761	ENDIF
[9019]	1762	!
[4148]	1763	CALL xios_solve_inheritance()
[9019]	1764	!
[3695]	1765	END SUBROUTINE iom_set_domain_attr
	1766
	1767
[9019]	1768	SUBROUTINE iom_set_zoom_domain_attr( cdid, ibegin, jbegin, ni, nj )
	1769	!!----------------------------------------------------------------------
	1770	!!----------------------------------------------------------------------
[9930]	1771	CHARACTER(LEN=*), INTENT(in) :: cdid
	1772	INTEGER , INTENT(in) :: ibegin, jbegin, ni, nj
	1773	!
	1774	TYPE(xios_gridgroup) :: gridgroup_hdl
	1775	TYPE(xios_grid) :: grid_hdl
	1776	TYPE(xios_domain) :: domain_hdl
	1777	TYPE(xios_axis) :: axis_hdl
	1778	CHARACTER(LEN=64) :: cldomrefid ! domain_ref name
	1779	CHARACTER(len=1) :: cl1 ! last character of this name
[9019]	1780	!!----------------------------------------------------------------------
[9930]	1781	!
	1782	IF( xios_is_valid_zoom_domain(cdid) ) THEN
	1783	! define the zoom_domain attributs
	1784	CALL xios_set_zoom_domain_attr( cdid, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj )
	1785	! define a new 2D grid with this new domain
	1786	CALL xios_get_handle("grid_definition", gridgroup_hdl )
	1787	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_2D' ) ! add a new 2D grid to grid_definition
	1788	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1789	! define a new 3D grid with this new domain
	1790	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_3D' ) ! add a new 3D grid to grid_definition
	1791	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1792	! vertical axis
	1793	cl1 = cdid(LEN_TRIM(cdid):) ! last letter of cdid
	1794	cl1 = CHAR(ICHAR(cl1)+32) ! from upper to lower case
	1795	CALL xios_add_child(grid_hdl, axis_hdl, 'depth'//cl1) ! add its axis
	1796	ENDIF
	1797	!
[7646]	1798	END SUBROUTINE iom_set_zoom_domain_attr
	1799
	1800
[5415]	1801	SUBROUTINE iom_set_axis_attr( cdid, paxis, bounds )
[9019]	1802	!!----------------------------------------------------------------------
	1803	!!----------------------------------------------------------------------
[4148]	1804	CHARACTER(LEN=*) , INTENT(in) :: cdid
[5415]	1805	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: paxis
	1806	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds
[9019]	1807	!!----------------------------------------------------------------------
	1808	IF( PRESENT(paxis) ) THEN
	1809	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, n_glo=SIZE(paxis), value=paxis )
	1810	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, n_glo=SIZE(paxis), value=paxis )
[5415]	1811	ENDIF
[9019]	1812	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, bounds=bounds )
	1813	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, bounds=bounds )
[4148]	1814	CALL xios_solve_inheritance()
[3737]	1815	END SUBROUTINE iom_set_axis_attr
	1816
	1817
[4148]	1818	SUBROUTINE iom_set_field_attr( cdid, freq_op, freq_offset )
[9019]	1819	!!----------------------------------------------------------------------
	1820	!!----------------------------------------------------------------------
	1821	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1822	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_op
	1823	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_offset
	1824	!!----------------------------------------------------------------------
	1825	IF( xios_is_valid_field (cdid) ) CALL xios_set_field_attr ( cdid, freq_op=freq_op, freq_offset=freq_offset )
	1826	IF( xios_is_valid_fieldgroup(cdid) ) CALL xios_set_fieldgroup_attr( cdid, freq_op=freq_op, freq_offset=freq_offset )
[4148]	1827	CALL xios_solve_inheritance()
[3695]	1828	END SUBROUTINE iom_set_field_attr
	1829
	1830
[4148]	1831	SUBROUTINE iom_set_file_attr( cdid, name, name_suffix )
[9019]	1832	!!----------------------------------------------------------------------
	1833	!!----------------------------------------------------------------------
[4148]	1834	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3695]	1835	CHARACTER(LEN=*),OPTIONAL , INTENT(in) :: name, name_suffix
[9019]	1836	!!----------------------------------------------------------------------
	1837	IF( xios_is_valid_file (cdid) ) CALL xios_set_file_attr ( cdid, name=name, name_suffix=name_suffix )
	1838	IF( xios_is_valid_filegroup(cdid) ) CALL xios_set_filegroup_attr( cdid, name=name, name_suffix=name_suffix )
[4148]	1839	CALL xios_solve_inheritance()
[3771]	1840	END SUBROUTINE iom_set_file_attr
[3695]	1841
	1842
[4148]	1843	SUBROUTINE iom_get_file_attr( cdid, name, name_suffix, output_freq )
[9019]	1844	!!----------------------------------------------------------------------
	1845	!!----------------------------------------------------------------------
[4148]	1846	CHARACTER(LEN=*) , INTENT(in ) :: cdid
[7646]	1847	CHARACTER(LEN=*),OPTIONAL , INTENT(out) :: name, name_suffix
	1848	TYPE(xios_duration), OPTIONAL , INTENT(out) :: output_freq
[4148]	1849	LOGICAL :: llexist1,llexist2,llexist3
	1850	!---------------------------------------------------------------------
	1851	IF( PRESENT( name ) ) name = '' ! default values
	1852	IF( PRESENT( name_suffix ) ) name_suffix = ''
[7646]	1853	IF( PRESENT( output_freq ) ) output_freq = xios_duration(0,0,0,0,0,0)
[9019]	1854	IF( xios_is_valid_file (cdid) ) THEN
[4148]	1855	CALL xios_solve_inheritance()
	1856	CALL xios_is_defined_file_attr ( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1857	IF(llexist1) CALL xios_get_file_attr ( cdid, name = name )
	1858	IF(llexist2) CALL xios_get_file_attr ( cdid, name_suffix = name_suffix )
	1859	IF(llexist3) CALL xios_get_file_attr ( cdid, output_freq = output_freq )
	1860	ENDIF
[9019]	1861	IF( xios_is_valid_filegroup(cdid) ) THEN
[4148]	1862	CALL xios_solve_inheritance()
	1863	CALL xios_is_defined_filegroup_attr( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1864	IF(llexist1) CALL xios_get_filegroup_attr( cdid, name = name )
	1865	IF(llexist2) CALL xios_get_filegroup_attr( cdid, name_suffix = name_suffix )
	1866	IF(llexist3) CALL xios_get_filegroup_attr( cdid, output_freq = output_freq )
	1867	ENDIF
	1868	END SUBROUTINE iom_get_file_attr
	1869
	1870
	1871	SUBROUTINE iom_set_grid_attr( cdid, mask )
[9019]	1872	!!----------------------------------------------------------------------
	1873	!!----------------------------------------------------------------------
[4148]	1874	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3771]	1875	LOGICAL, DIMENSION(:,:,:), OPTIONAL, INTENT(in) :: mask
[9019]	1876	!!----------------------------------------------------------------------
	1877	IF( xios_is_valid_grid (cdid) ) CALL xios_set_grid_attr ( cdid, mask_3D=mask )
	1878	IF( xios_is_valid_gridgroup(cdid) ) CALL xios_set_gridgroup_attr( cdid, mask_3D=mask )
[4148]	1879	CALL xios_solve_inheritance()
[3771]	1880	END SUBROUTINE iom_set_grid_attr
[3695]	1881
[4152]	1882	SUBROUTINE iom_setkt( kt, cdname )
[9019]	1883	!!----------------------------------------------------------------------
	1884	!!----------------------------------------------------------------------
[4152]	1885	INTEGER , INTENT(in) :: kt
	1886	CHARACTER(LEN=*), INTENT(in) :: cdname
[9019]	1887	!!----------------------------------------------------------------------
[4152]	1888	CALL iom_swap( cdname ) ! swap to cdname context
	1889	CALL xios_update_calendar(kt)
[9019]	1890	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4152]	1891	END SUBROUTINE iom_setkt
[3695]	1892
[4152]	1893	SUBROUTINE iom_context_finalize( cdname )
[9019]	1894	!!----------------------------------------------------------------------
	1895	!!----------------------------------------------------------------------
[4152]	1896	CHARACTER(LEN=*), INTENT(in) :: cdname
[9367]	1897	CHARACTER(LEN=120) :: clname
[9019]	1898	!!----------------------------------------------------------------------
[9367]	1899	clname = cdname
	1900	IF( TRIM(Agrif_CFixed()) .NE. '0' ) clname = TRIM(Agrif_CFixed())//"_"//clname
	1901	IF( xios_is_valid_context(clname) ) THEN
[4990]	1902	CALL iom_swap( cdname ) ! swap to cdname context
	1903	CALL xios_context_finalize() ! finalize the context
[5407]	1904	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4990]	1905	ENDIF
[9367]	1906	!
[4152]	1907	END SUBROUTINE iom_context_finalize
	1908
	1909
[9984]	1910	SUBROUTINE set_grid( cdgrd, plon, plat, ldxios, ldrxios )
[1359]	1911	!!----------------------------------------------------------------------
[4148]	1912	!! * ROUTINE set_grid *
[1359]	1913	!!
[1725]	1914	!! ** Purpose : define horizontal grids
[1359]	1915	!!----------------------------------------------------------------------
[3771]	1916	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
[1359]	1917	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plon
	1918	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
[3771]	1919	!
[9019]	1920	INTEGER :: ni, nj
[3771]	1921	REAL(wp), DIMENSION(jpi,jpj,jpk) :: zmask
[9984]	1922	LOGICAL, INTENT(IN) :: ldxios, ldrxios
[9019]	1923	!!----------------------------------------------------------------------
	1924	!
	1925	ni = nlei-nldi+1
	1926	nj = nlej-nldj+1
	1927	!
[7646]	1928	CALL iom_set_domain_attr("grid_"//cdgrd, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[3771]	1929	CALL iom_set_domain_attr("grid_"//cdgrd, data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
[9984]	1930	!don't define lon and lat for restart reading context.
	1931	IF ( .NOT.ldrxios ) &
	1932	CALL iom_set_domain_attr("grid_"//cdgrd, lonvalue = RESHAPE(plon(nldi:nlei, nldj:nlej),(/ ni*nj /)), &
[3771]	1933	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[9019]	1934	!
[9367]	1935	IF ( ln_mskland .AND. (.NOT.ldxios) ) THEN
[3771]	1936	! mask land points, keep values on coast line -> specific mask for U, V and W points
	1937	SELECT CASE ( cdgrd )
	1938	CASE('T') ; zmask(:,:,:) = tmask(:,:,:)
[10425]	1939	CASE('U') ; zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( 'iom', zmask, 'U', 1. )
	1940	CASE('V') ; zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( 'iom', zmask, 'V', 1. )
[3771]	1941	CASE('W') ; zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
	1942	END SELECT
	1943	!
[7646]	1944	CALL iom_set_domain_attr( "grid_"//cdgrd , mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,1),(/ni*nj /)) /= 0. )
[4148]	1945	CALL iom_set_grid_attr ( "grid_"//cdgrd//"_3D", mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,:),(/ni,nj,jpk/)) /= 0. )
[3771]	1946	ENDIF
[9019]	1947	!
[1359]	1948	END SUBROUTINE set_grid
	1949
[1725]	1950
[5415]	1951	SUBROUTINE set_grid_bounds( cdgrd, plon_cnr, plat_cnr, plon_pnt, plat_pnt )
[5363]	1952	!!----------------------------------------------------------------------
	1953	!! * ROUTINE set_grid_bounds *
	1954	!!
	1955	!! ** Purpose : define horizontal grid corners
	1956	!!
	1957	!!----------------------------------------------------------------------
[9019]	1958	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
	1959	REAL(wp), DIMENSION(jpi,jpj) , INTENT(in) :: plon_cnr, plat_cnr ! Lat/lon coord. of a contiguous vertex of cell (i,j)
	1960	REAL(wp), DIMENSION(jpi,jpj), OPTIONAL, INTENT(in) :: plon_pnt, plat_pnt ! Lat/lon coord. of the point of cell (i,j)
[5363]	1961	!
[9019]	1962	INTEGER :: ji, jj, jn, ni, nj
[11275]	1963	INTEGER :: icnr, jcnr ! Offset such that the vertex coordinate (i+icnr,j+jcnr)
	1964	! ! represents the bottom-left corner of cell (i,j)
[11586]	1965	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: z_bnds ! Lat/lon coordinates of the vertices of cell (i,j)
	1966	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_fld ! Working array to determine where to rotate cells
	1967	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_rot ! Lat/lon working array for rotation of cells
[9019]	1968	!!----------------------------------------------------------------------
[5415]	1969	!
[11586]	1970	ALLOCATE( z_bnds(4,jpi,jpj,2), z_fld(jpi,jpj), z_rot(4,2) )
	1971	!
[5415]	1972	! Offset of coordinate representing bottom-left corner
[5363]	1973	SELECT CASE ( TRIM(cdgrd) )
[9019]	1974	CASE ('T', 'W') ; icnr = -1 ; jcnr = -1
	1975	CASE ('U') ; icnr = 0 ; jcnr = -1
	1976	CASE ('V') ; icnr = -1 ; jcnr = 0
[5363]	1977	END SELECT
[9019]	1978	!
	1979	ni = nlei-nldi+1 ! Dimensions of subdomain interior
	1980	nj = nlej-nldj+1
	1981	!
[5363]	1982	z_fld(:,:) = 1._wp
[10425]	1983	CALL lbc_lnk( 'iom', z_fld, cdgrd, -1. ) ! Working array for location of northfold
[9019]	1984	!
[5363]	1985	! Cell vertices that can be defined
	1986	DO jj = 2, jpjm1
	1987	DO ji = 2, jpim1
[5415]	1988	z_bnds(1,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	1989	z_bnds(2,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	1990	z_bnds(3,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	1991	z_bnds(4,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr+1) ! Top-left
	1992	z_bnds(1,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	1993	z_bnds(2,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	1994	z_bnds(3,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	1995	z_bnds(4,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr+1) ! Top-left
[5363]	1996	END DO
	1997	END DO
[9019]	1998	!
[5363]	1999	! Cell vertices on boundries
	2000	DO jn = 1, 4
[11194]	2001	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,1), cdgrd, 1., pfillval=999._wp )
	2002	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,2), cdgrd, 1., pfillval=999._wp )
[5363]	2003	END DO
[9019]	2004	!
[5415]	2005	! Zero-size cells at closed boundaries if cell points provided,
	2006	! otherwise they are closed cells with unrealistic bounds
	2007	IF( PRESENT(plon_pnt) .AND. PRESENT(plat_pnt) ) THEN
	2008	IF( (nbondi == -1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2009	DO jn = 1, 4 ! (West or jpni = 1), closed E-W
	2010	z_bnds(jn,1,:,1) = plat_pnt(1,:) ; z_bnds(jn,1,:,2) = plon_pnt(1,:)
	2011	END DO
	2012	ENDIF
	2013	IF( (nbondi == 1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2014	DO jn = 1, 4 ! (East or jpni = 1), closed E-W
	2015	z_bnds(jn,nlci,:,1) = plat_pnt(nlci,:) ; z_bnds(jn,nlci,:,2) = plon_pnt(nlci,:)
	2016	END DO
	2017	ENDIF
	2018	IF( nbondj == -1 .OR. (nbondj == 2 .AND. jperio /= 2) ) THEN
	2019	DO jn = 1, 4 ! South or (jpnj = 1, not symmetric)
	2020	z_bnds(jn,:,1,1) = plat_pnt(:,1) ; z_bnds(jn,:,1,2) = plon_pnt(:,1)
	2021	END DO
	2022	ENDIF
	2023	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio < 3 ) THEN
	2024	DO jn = 1, 4 ! (North or jpnj = 1), no north fold
	2025	z_bnds(jn,:,nlcj,1) = plat_pnt(:,nlcj) ; z_bnds(jn,:,nlcj,2) = plon_pnt(:,nlcj)
	2026	END DO
	2027	ENDIF
[5363]	2028	ENDIF
[9019]	2029	!
	2030	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio >= 3 ) THEN ! Rotate cells at the north fold
[5363]	2031	DO jj = 1, jpj
	2032	DO ji = 1, jpi
	2033	IF( z_fld(ji,jj) == -1. ) THEN
	2034	z_rot(1,:) = z_bnds(3,ji,jj,:) ; z_rot(2,:) = z_bnds(4,ji,jj,:)
	2035	z_rot(3,:) = z_bnds(1,ji,jj,:) ; z_rot(4,:) = z_bnds(2,ji,jj,:)
	2036	z_bnds(:,ji,jj,:) = z_rot(:,:)
	2037	ENDIF
	2038	END DO
	2039	END DO
[9019]	2040	ELSE IF( nbondj == 2 .AND. jperio == 2 ) THEN ! Invert cells at the symmetric equator
[5363]	2041	DO ji = 1, jpi
	2042	z_rot(1:2,:) = z_bnds(3:4,ji,1,:)
	2043	z_rot(3:4,:) = z_bnds(1:2,ji,1,:)
	2044	z_bnds(:,ji,1,:) = z_rot(:,:)
	2045	END DO
	2046	ENDIF
[9019]	2047	!
[5363]	2048	CALL iom_set_domain_attr("grid_"//cdgrd, bounds_lat = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,1),(/ 4,ni*nj /)), &
[9019]	2049	& bounds_lon = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,2),(/ 4,ni*nj /)), nvertex=4 )
	2050	!
[11586]	2051	DEALLOCATE( z_bnds, z_fld, z_rot )
	2052	!
[5363]	2053	END SUBROUTINE set_grid_bounds
	2054
	2055
[5385]	2056	SUBROUTINE set_grid_znl( plat )
	2057	!!----------------------------------------------------------------------
	2058	!! * ROUTINE set_grid_znl *
	2059	!!
	2060	!! ** Purpose : define grids for zonal mean
	2061	!!
	2062	!!----------------------------------------------------------------------
	2063	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
	2064	!
[9019]	2065	INTEGER :: ni, nj, ix, iy
[5385]	2066	REAL(wp), DIMENSION(:), ALLOCATABLE :: zlon
[9019]	2067	!!----------------------------------------------------------------------
	2068	!
	2069	ni=nlei-nldi+1 ! define zonal mean domain (jpj*jpk)
	2070	nj=nlej-nldj+1
	2071	ALLOCATE( zlon(ni*nj) ) ; zlon(:) = 0._wp
	2072	!
[8573]	2073	CALL dom_ngb( -168.53, 65.03, ix, iy, 'T' ) ! i-line that passes through Bering Strait: Reference latitude (used in plots)
[9019]	2074	! CALL dom_ngb( 180., 90., ix, iy, 'T' ) ! i-line that passes near the North Pole : Reference latitude (used in plots)
[7646]	2075	CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[5385]	2076	CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
	2077	CALL iom_set_domain_attr("gznl", lonvalue = zlon, &
	2078	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[9930]	2079	CALL iom_set_zoom_domain_attr("znl_T", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
	2080	CALL iom_set_zoom_domain_attr("znl_W", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
[5385]	2081	!
	2082	CALL iom_update_file_name('ptr')
	2083	!
	2084	END SUBROUTINE set_grid_znl
	2085
[9019]	2086
[1738]	2087	SUBROUTINE set_scalar
	2088	!!----------------------------------------------------------------------
[4148]	2089	!! * ROUTINE set_scalar *
[1738]	2090	!!
	2091	!! ** Purpose : define fake grids for scalar point
	2092	!!
	2093	!!----------------------------------------------------------------------
[5426]	2094	REAL(wp), DIMENSION(1) :: zz = 1.
[1738]	2095	!!----------------------------------------------------------------------
[9019]	2096	!
[7646]	2097	CALL iom_set_domain_attr('scalarpoint', ni_glo=jpnij, nj_glo=1, ibegin=narea-1, jbegin=0, ni=1, nj=1)
[5426]	2098	CALL iom_set_domain_attr('scalarpoint', data_dim=2, data_ibegin = 1, data_ni = 1, data_jbegin = 1, data_nj = 1)
[9019]	2099	!
	2100	zz = REAL( narea, wp )
[5426]	2101	CALL iom_set_domain_attr('scalarpoint', lonvalue=zz, latvalue=zz)
[9019]	2102	!
[1738]	2103	END SUBROUTINE set_scalar
	2104
	2105
[1725]	2106	SUBROUTINE set_xmlatt
	2107	!!----------------------------------------------------------------------
[4148]	2108	!! * ROUTINE set_xmlatt *
[1725]	2109	!!
	2110	!! ** Purpose : automatic definitions of some of the xml attributs...
	2111	!!
	2112	!!----------------------------------------------------------------------
	2113	CHARACTER(len=1),DIMENSION( 3) :: clgrd ! suffix name
[4148]	2114	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2115	CHARACTER(len=1) :: cl1 ! 1 character
[5003]	2116	CHARACTER(len=2) :: cl2 ! 2 characters
	2117	CHARACTER(len=3) :: cl3 ! 3 characters
[4148]	2118	INTEGER :: ji, jg ! loop counters
[1725]	2119	INTEGER :: ix, iy ! i-,j- index
	2120	REAL(wp) ,DIMENSION(11) :: zlontao ! longitudes of tao moorings
	2121	REAL(wp) ,DIMENSION( 7) :: zlattao ! latitudes of tao moorings
	2122	REAL(wp) ,DIMENSION( 4) :: zlonrama ! longitudes of rama moorings
	2123	REAL(wp) ,DIMENSION(11) :: zlatrama ! latitudes of rama moorings
	2124	REAL(wp) ,DIMENSION( 3) :: zlonpira ! longitudes of pirata moorings
	2125	REAL(wp) ,DIMENSION( 9) :: zlatpira ! latitudes of pirata moorings
[7646]	2126	TYPE(xios_duration) :: f_op, f_of
[1725]	2127	!!----------------------------------------------------------------------
	2128	!
	2129	! frequency of the call of iom_put (attribut: freq_op)
[9019]	2130	f_op%timestep = 1 ; f_of%timestep = 0 ; CALL iom_set_field_attr('field_definition', freq_op=f_op, freq_offset=f_of)
	2131	f_op%timestep = 2 ; f_of%timestep = 0 ; CALL iom_set_field_attr('trendT_even' , freq_op=f_op, freq_offset=f_of)
	2132	f_op%timestep = 2 ; f_of%timestep = -1 ; CALL iom_set_field_attr('trendT_odd' , freq_op=f_op, freq_offset=f_of)
	2133	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC' , freq_op=f_op, freq_offset=f_of)
	2134	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC_scalar' , freq_op=f_op, freq_offset=f_of)
[11275]	2135	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ABL' , freq_op=f_op, freq_offset=f_of)
[9019]	2136	f_op%timestep = nn_dttrc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ptrc_T' , freq_op=f_op, freq_offset=f_of)
	2137	f_op%timestep = nn_dttrc ; f_of%timestep = 0 ; CALL iom_set_field_attr('diad_T' , freq_op=f_op, freq_offset=f_of)
[7646]	2138
[1725]	2139	! output file names (attribut: name)
[4148]	2140	DO ji = 1, 9
	2141	WRITE(cl1,'(i1)') ji
	2142	CALL iom_update_file_name('file'//cl1)
[1725]	2143	END DO
[4148]	2144	DO ji = 1, 99
	2145	WRITE(cl2,'(i2.2)') ji
	2146	CALL iom_update_file_name('file'//cl2)
	2147	END DO
[5003]	2148	DO ji = 1, 999
	2149	WRITE(cl3,'(i3.3)') ji
	2150	CALL iom_update_file_name('file'//cl3)
	2151	END DO
[1725]	2152
	2153	! Zooms...
	2154	clgrd = (/ 'T', 'U', 'W' /)
	2155	DO jg = 1, SIZE(clgrd) ! grid type
	2156	cl1 = clgrd(jg)
	2157	! Equatorial section (attributs: jbegin, ni, name_suffix)
	2158	CALL dom_ngb( 0., 0., ix, iy, cl1 )
[9930]	2159	CALL iom_set_zoom_domain_attr('Eq'//cl1, ibegin=0, jbegin=iy-1, ni=jpiglo, nj=1 )
[4148]	2160	CALL iom_get_file_attr ('Eq'//cl1, name_suffix = clsuff )
	2161	CALL iom_set_file_attr ('Eq'//cl1, name_suffix = TRIM(clsuff)//'_Eq')
	2162	CALL iom_update_file_name('Eq'//cl1)
[1725]	2163	END DO
	2164	! TAO moorings (attributs: ibegin, jbegin, name_suffix)
	2165	zlontao = (/ 137.0, 147.0, 156.0, 165.0, -180.0, -170.0, -155.0, -140.0, -125.0, -110.0, -95.0 /)
	2166	zlattao = (/ -8.0, -5.0, -2.0, 0.0, 2.0, 5.0, 8.0 /)
	2167	CALL set_mooring( zlontao, zlattao )
	2168	! RAMA moorings (attributs: ibegin, jbegin, name_suffix)
	2169	zlonrama = (/ 55.0, 67.0, 80.5, 90.0 /)
	2170	zlatrama = (/ -16.0, -12.0, -8.0, -4.0, -1.5, 0.0, 1.5, 4.0, 8.0, 12.0, 15.0 /)
	2171	CALL set_mooring( zlonrama, zlatrama )
	2172	! PIRATA moorings (attributs: ibegin, jbegin, name_suffix)
	2173	zlonpira = (/ -38.0, -23.0, -10.0 /)
	2174	zlatpira = (/ -19.0, -14.0, -8.0, 0.0, 4.0, 8.0, 12.0, 15.0, 20.0 /)
	2175	CALL set_mooring( zlonpira, zlatpira )
[9019]	2176	!
[1725]	2177	END SUBROUTINE set_xmlatt
	2178
	2179
[9019]	2180	SUBROUTINE set_mooring( plon, plat )
[1725]	2181	!!----------------------------------------------------------------------
[4148]	2182	!! * ROUTINE set_mooring *
[1725]	2183	!!
	2184	!! ** Purpose : automatic definitions of moorings xml attributs...
	2185	!!
	2186	!!----------------------------------------------------------------------
[9019]	2187	REAL(wp), DIMENSION(:), INTENT(in) :: plon, plat ! longitudes/latitudes oft the mooring
[1725]	2188	!
	2189	!!$ CHARACTER(len=1),DIMENSION(4) :: clgrd = (/ 'T', 'U', 'V', 'W' /) ! suffix name
	2190	CHARACTER(len=1),DIMENSION(1) :: clgrd = (/ 'T' /) ! suffix name
[4148]	2191	CHARACTER(len=256) :: clname ! file name
	2192	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2193	CHARACTER(len=1) :: cl1 ! 1 character
	2194	CHARACTER(len=6) :: clon,clat ! name of longitude, latitude
	2195	INTEGER :: ji, jj, jg ! loop counters
	2196	INTEGER :: ix, iy ! i-,j- index
	2197	REAL(wp) :: zlon, zlat
	2198	!!----------------------------------------------------------------------
	2199	DO jg = 1, SIZE(clgrd)
	2200	cl1 = clgrd(jg)
	2201	DO ji = 1, SIZE(plon)
	2202	DO jj = 1, SIZE(plat)
	2203	zlon = plon(ji)
	2204	zlat = plat(jj)
	2205	! modifications for RAMA moorings
	2206	IF( zlon == 67. .AND. zlat == 15. ) zlon = 65.
	2207	IF( zlon == 90. .AND. zlat <= -4. ) zlon = 95.
	2208	IF( zlon == 95. .AND. zlat == -4. ) zlat = -5.
	2209	! modifications for PIRATA moorings
	2210	IF( zlon == -38. .AND. zlat == -19. ) zlon = -34.
	2211	IF( zlon == -38. .AND. zlat == -14. ) zlon = -32.
	2212	IF( zlon == -38. .AND. zlat == -8. ) zlon = -30.
	2213	IF( zlon == -38. .AND. zlat == 0. ) zlon = -35.
	2214	IF( zlon == -23. .AND. zlat == 20. ) zlat = 21.
	2215	IF( zlon == -10. .AND. zlat == -14. ) zlat = -10.
	2216	IF( zlon == -10. .AND. zlat == -8. ) zlat = -6.
	2217	IF( zlon == -10. .AND. zlat == 4. ) THEN ; zlon = 0. ; zlat = 0. ; ENDIF
	2218	CALL dom_ngb( zlon, zlat, ix, iy, cl1 )
	2219	IF( zlon >= 0. ) THEN
	2220	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT( zlon), 'e'
	2221	ELSE ; WRITE(clon, '(f5.1,a)') zlon , 'e'
	2222	ENDIF
	2223	ELSE
	2224	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT(-zlon), 'w'
	2225	ELSE ; WRITE(clon, '(f5.1,a)') -zlon , 'w'
	2226	ENDIF
	2227	ENDIF
	2228	IF( zlat >= 0. ) THEN
	2229	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT( zlat), 'n'
	2230	ELSE ; WRITE(clat, '(f4.1,a)') zlat , 'n'
	2231	ENDIF
	2232	ELSE
	2233	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT(-zlat), 's'
	2234	ELSE ; WRITE(clat, '(f4.1,a)') -zlat , 's'
	2235	ENDIF
	2236	ENDIF
	2237	clname = TRIM(ADJUSTL(clat))//TRIM(ADJUSTL(clon))
[9930]	2238	CALL iom_set_zoom_domain_attr(TRIM(clname)//cl1, ibegin= ix-1, jbegin= iy-1, ni=1, nj=1)
[7646]	2239
[4148]	2240	CALL iom_get_file_attr (TRIM(clname)//cl1, name_suffix = clsuff )
	2241	CALL iom_set_file_attr (TRIM(clname)//cl1, name_suffix = TRIM(clsuff)//'_'//TRIM(clname))
	2242	CALL iom_update_file_name(TRIM(clname)//cl1)
[1725]	2243	END DO
	2244	END DO
	2245	END DO
	2246
	2247	END SUBROUTINE set_mooring
	2248
[4148]	2249
	2250	SUBROUTINE iom_update_file_name( cdid )
	2251	!!----------------------------------------------------------------------
	2252	!! * ROUTINE iom_update_file_name *
	2253	!!
	2254	!! ** Purpose :
	2255	!!
	2256	!!----------------------------------------------------------------------
	2257	CHARACTER(LEN=*) , INTENT(in) :: cdid
	2258	!
	2259	CHARACTER(LEN=256) :: clname
	2260	CHARACTER(LEN=20) :: clfreq
	2261	CHARACTER(LEN=20) :: cldate
	2262	INTEGER :: idx
	2263	INTEGER :: jn
	2264	INTEGER :: itrlen
	2265	INTEGER :: iyear, imonth, iday, isec
	2266	REAL(wp) :: zsec
	2267	LOGICAL :: llexist
[7646]	2268	TYPE(xios_duration) :: output_freq
[4148]	2269	!!----------------------------------------------------------------------
[9019]	2270	!
	2271	DO jn = 1, 2
	2272	!
[7646]	2273	output_freq = xios_duration(0,0,0,0,0,0)
	2274	IF( jn == 1 ) CALL iom_get_file_attr( cdid, name = clname, output_freq = output_freq )
[4148]	2275	IF( jn == 2 ) CALL iom_get_file_attr( cdid, name_suffix = clname )
[9019]	2276	!
[4148]	2277	IF ( TRIM(clname) /= '' ) THEN
[9019]	2278	!
[4148]	2279	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2280	DO WHILE ( idx /= 0 )
	2281	clname = clname(1:idx-1)//TRIM(cexper)//clname(idx+9:LEN_TRIM(clname))
	2282	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2283	END DO
[9019]	2284	!
[4148]	2285	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
	2286	DO WHILE ( idx /= 0 )
[7646]	2287	IF ( output_freq%timestep /= 0) THEN
	2288	WRITE(clfreq,'(I18,A2)')INT(output_freq%timestep),'ts'
	2289	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7764]	2290	ELSE IF ( output_freq%second /= 0 ) THEN
	2291	WRITE(clfreq,'(I19,A1)')INT(output_freq%second),'s'
	2292	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2293	ELSE IF ( output_freq%minute /= 0 ) THEN
[7768]	2294	WRITE(clfreq,'(I18,A2)')INT(output_freq%minute),'mi'
[7764]	2295	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7646]	2296	ELSE IF ( output_freq%hour /= 0 ) THEN
	2297	WRITE(clfreq,'(I19,A1)')INT(output_freq%hour),'h'
	2298	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2299	ELSE IF ( output_freq%day /= 0 ) THEN
	2300	WRITE(clfreq,'(I19,A1)')INT(output_freq%day),'d'
	2301	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2302	ELSE IF ( output_freq%month /= 0 ) THEN
	2303	WRITE(clfreq,'(I19,A1)')INT(output_freq%month),'m'
	2304	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2305	ELSE IF ( output_freq%year /= 0 ) THEN
	2306	WRITE(clfreq,'(I19,A1)')INT(output_freq%year),'y'
	2307	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2308	ELSE
[4148]	2309	CALL ctl_stop('error in the name of file id '//TRIM(cdid), &
	2310	& ' attribute output_freq is undefined -> cannot replace @freq@ in '//TRIM(clname) )
[7646]	2311	ENDIF
	2312	clname = clname(1:idx-1)//TRIM(ADJUSTL(clfreq))//clname(idx+6:LEN_TRIM(clname))
	2313	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
[4148]	2314	END DO
[9019]	2315	!
[4148]	2316	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2317	DO WHILE ( idx /= 0 )
[6140]	2318	cldate = iom_sdate( fjulday - rdt / rday )
[4148]	2319	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+11:LEN_TRIM(clname))
	2320	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2321	END DO
[9019]	2322	!
[4148]	2323	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2324	DO WHILE ( idx /= 0 )
[6140]	2325	cldate = iom_sdate( fjulday - rdt / rday, ldfull = .TRUE. )
[4148]	2326	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+15:LEN_TRIM(clname))
	2327	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2328	END DO
[9019]	2329	!
[4148]	2330	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2331	DO WHILE ( idx /= 0 )
[6140]	2332	cldate = iom_sdate( fjulday + rdt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE. )
[4148]	2333	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+9:LEN_TRIM(clname))
	2334	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2335	END DO
[9019]	2336	!
[4148]	2337	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2338	DO WHILE ( idx /= 0 )
[6140]	2339	cldate = iom_sdate( fjulday + rdt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE., ldfull = .TRUE. )
[4148]	2340	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+13:LEN_TRIM(clname))
	2341	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2342	END DO
[9019]	2343	!
[5656]	2344	IF( jn == 1 .AND. TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(clname)
[4148]	2345	IF( jn == 1 ) CALL iom_set_file_attr( cdid, name = clname )
	2346	IF( jn == 2 ) CALL iom_set_file_attr( cdid, name_suffix = clname )
[9019]	2347	!
[4148]	2348	ENDIF
[9019]	2349	!
[4148]	2350	END DO
[9019]	2351	!
[4148]	2352	END SUBROUTINE iom_update_file_name
	2353
	2354
	2355	FUNCTION iom_sdate( pjday, ld24, ldfull )
	2356	!!----------------------------------------------------------------------
	2357	!! * ROUTINE iom_sdate *
	2358	!!
	2359	!! ** Purpose : send back the date corresponding to the given julian day
	2360	!!----------------------------------------------------------------------
[9019]	2361	REAL(wp), INTENT(in ) :: pjday ! julian day
	2362	LOGICAL , INTENT(in ), OPTIONAL :: ld24 ! true to force 24:00 instead of 00:00
	2363	LOGICAL , INTENT(in ), OPTIONAL :: ldfull ! true to get the compleate date: yyyymmdd_hh:mm:ss
[4148]	2364	!
	2365	CHARACTER(LEN=20) :: iom_sdate
	2366	CHARACTER(LEN=50) :: clfmt ! format used to write the date
	2367	INTEGER :: iyear, imonth, iday, ihour, iminute, isec
	2368	REAL(wp) :: zsec
	2369	LOGICAL :: ll24, llfull
[9019]	2370	!!----------------------------------------------------------------------
[4148]	2371	!
	2372	IF( PRESENT(ld24) ) THEN ; ll24 = ld24
	2373	ELSE ; ll24 = .FALSE.
	2374	ENDIF
[9019]	2375	!
[4148]	2376	IF( PRESENT(ldfull) ) THEN ; llfull = ldfull
	2377	ELSE ; llfull = .FALSE.
	2378	ENDIF
[9019]	2379	!
[4148]	2380	CALL ju2ymds( pjday, iyear, imonth, iday, zsec )
	2381	isec = NINT(zsec)
[9019]	2382	!
[4148]	2383	IF ( ll24 .AND. isec == 0 ) THEN ! 00:00 of the next day -> move to 24:00 of the current day
	2384	CALL ju2ymds( pjday - 1., iyear, imonth, iday, zsec )
	2385	isec = 86400
	2386	ENDIF
[9019]	2387	!
[4148]	2388	IF( iyear < 10000 ) THEN ; clfmt = "i4.4,2i2.2" ! format used to write the date
	2389	ELSE ; WRITE(clfmt, "('i',i1,',2i2.2')") INT(LOG10(REAL(iyear,wp))) + 1
	2390	ENDIF
[9019]	2391	!
[5656]	2392	!$AGRIF_DO_NOT_TREAT
[9019]	2393	! needed in the conv
[4148]	2394	IF( llfull ) THEN
	2395	clfmt = TRIM(clfmt)//",'_',i2.2,':',i2.2,':',i2.2"
	2396	ihour = isec / 3600
	2397	isec = MOD(isec, 3600)
	2398	iminute = isec / 60
	2399	isec = MOD(isec, 60)
	2400	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday, ihour, iminute, isec ! date of the end of run
	2401	ELSE
	2402	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday ! date of the end of run
	2403	ENDIF
[5656]	2404	!$AGRIF_END_DO_NOT_TREAT
[9019]	2405	!
[4148]	2406	END FUNCTION iom_sdate
	2407
[1359]	2408	#else
[9019]	2409	!!----------------------------------------------------------------------
	2410	!! NOT 'key_iomput' a few dummy routines
	2411	!!----------------------------------------------------------------------
[4152]	2412	SUBROUTINE iom_setkt( kt, cdname )
	2413	INTEGER , INTENT(in):: kt
	2414	CHARACTER(LEN=*), INTENT(in) :: cdname
	2415	IF( .FALSE. ) WRITE(numout,*) kt, cdname ! useless test to avoid compilation warnings
[1359]	2416	END SUBROUTINE iom_setkt
	2417
[4152]	2418	SUBROUTINE iom_context_finalize( cdname )
	2419	CHARACTER(LEN=*), INTENT(in) :: cdname
	2420	IF( .FALSE. ) WRITE(numout,*) cdname ! useless test to avoid compilation warnings
	2421	END SUBROUTINE iom_context_finalize
	2422
[1359]	2423	#endif
[4689]	2424
	2425	LOGICAL FUNCTION iom_use( cdname )
	2426	CHARACTER(LEN=*), INTENT(in) :: cdname
	2427	#if defined key_iomput
	2428	iom_use = xios_field_is_active( cdname )
	2429	#else
	2430	iom_use = .FALSE.
	2431	#endif
	2432	END FUNCTION iom_use
[11413]	2433
	2434	SUBROUTINE iom_miss_val( cdname, pmiss_val )
	2435	CHARACTER(LEN=*), INTENT(in ) :: cdname
	2436	REAL(wp) , INTENT(out) :: pmiss_val
	2437	#if defined key_iomput
	2438	! get missing value
	2439	CALL xios_get_field_attr( cdname, default_value = pmiss_val )
	2440	#else
	2441	IF( .FALSE. ) WRITE(numout,*) cdname, pmiss_val ! useless test to avoid compilation warnings
	2442	#endif
	2443	END SUBROUTINE iom_miss_val
	2444
[544]	2445	!!======================================================================
	2446	END MODULE iom

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