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iom.F90 in NEMO/branches/2020/r12377_ticket2386/src/OCE/IOM – NEMO

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source: NEMO/branches/2020/r12377_ticket2386/src/OCE/IOM/iom.F90 @ 12515

Last change on this file since 12515 was 12515, checked in by andmirek, 4 years ago
Ticket #2386 : changes in code to make XIOS restart read/write working in reference configurations
Property svn:keywords set to `Id`
File size: 130.1 KB

Rev	Line
[544]	1	MODULE iom
[9019]	2	!!======================================================================
[544]	3	!! * MODULE iom *
	4	!! Input/Output manager : Library to read input files
[9019]	5	!!======================================================================
[3764]	6	!! History : 2.0 ! 2005-12 (J. Belier) Original code
	7	!! 2.0 ! 2006-02 (S. Masson) Adaptation to NEMO
	8	!! 3.0 ! 2007-07 (D. Storkey) Changes to iom_gettime
	9	!! 3.4 ! 2012-12 (R. Bourdalle-Badie and G. Reffray) add C1D case
[6140]	10	!! 3.6 ! 2014-15 DIMG format removed
[7646]	11	!! 3.6 ! 2015-15 (J. Harle) Added procedure to read REAL attributes
[9019]	12	!! 4.0 ! 2017-11 (M. Andrejczuk) Extend IOM interface to write any 3D fields
	13	!!----------------------------------------------------------------------
[544]	14
[9019]	15	!!----------------------------------------------------------------------
[544]	16	!! iom_open : open a file read only
	17	!! iom_close : close a file or all files opened by iom
	18	!! iom_get : read a field (interfaced to several routines)
	19	!! iom_varid : get the id of a variable in a file
	20	!! iom_rstput : write a field in a restart file (interfaced to several routines)
[9019]	21	!!----------------------------------------------------------------------
[544]	22	USE dom_oce ! ocean space and time domain
[3764]	23	USE c1d ! 1D vertical configuration
[3294]	24	USE flo_oce ! floats module declarations
[679]	25	USE lbclnk ! lateal boundary condition / mpp exchanges
[544]	26	USE iom_def ! iom variables definitions
	27	USE iom_nf90 ! NetCDF format with native NetCDF library
[2715]	28	USE in_out_manager ! I/O manager
	29	USE lib_mpp ! MPP library
[1412]	30	#if defined key_iomput
[12377]	31	USE sbc_oce , ONLY : nn_fsbc, ght_abl, ghw_abl, e3t_abl, e3w_abl, jpka, jpkam1
[9019]	32	USE icb_oce , ONLY : nclasses, class_num ! !: iceberg classes
[9570]	33	#if defined key_si3
[9019]	34	USE ice , ONLY : jpl
[4691]	35	#endif
[1725]	36	USE domngb ! ocean space and time domain
	37	USE phycst ! physical constants
	38	USE dianam ! build name of file
[3695]	39	USE xios
[1359]	40	# endif
[4148]	41	USE ioipsl, ONLY : ju2ymds ! for calendar
[4152]	42	USE crs ! Grid coarsening
[10222]	43	#if defined key_top
	44	USE trc, ONLY : profsed
	45	#endif
[9367]	46	USE lib_fortran
[12377]	47	USE diu_bulk, ONLY : ln_diurnal_only, ln_diurnal
[1359]	48
[544]	49	IMPLICIT NONE
[556]	50	PUBLIC ! must be public to be able to access iom_def through iom
[550]	51
[1457]	52	#if defined key_iomput
[1725]	53	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .TRUE. !: iom_put flag
[1457]	54	#else
	55	LOGICAL, PUBLIC, PARAMETER :: lk_iomput = .FALSE. !: iom_put flag
	56	#endif
[12377]	57	PUBLIC iom_init, iom_init_closedef, iom_swap, iom_open, iom_close, iom_setkt, iom_varid, iom_get, iom_get_var
[10522]	58	PUBLIC iom_chkatt, iom_getatt, iom_putatt, iom_getszuld, iom_rstput, iom_delay_rst, iom_put
[12377]	59	PUBLIC iom_use, iom_context_finalize, iom_update_file_name, iom_miss_val
[544]	60
[752]	61	PRIVATE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
	62	PRIVATE iom_g0d, iom_g1d, iom_g2d, iom_g3d, iom_get_123d
[12276]	63	PRIVATE iom_p1d, iom_p2d, iom_p3d, iom_p4d
[1412]	64	#if defined key_iomput
[4148]	65	PRIVATE iom_set_domain_attr, iom_set_axis_attr, iom_set_field_attr, iom_set_file_attr, iom_get_file_attr, iom_set_grid_attr
[12377]	66	PRIVATE set_grid, set_grid_bounds, set_scalar, set_xmlatt, set_mooring, iom_sdate
[9367]	67	PRIVATE iom_set_rst_context, iom_set_rstw_active, iom_set_rstr_active
[1359]	68	# endif
[9535]	69	PUBLIC iom_set_rstw_var_active, iom_set_rstw_core, iom_set_rst_vars
[752]	70
[544]	71	INTERFACE iom_get
[550]	72	MODULE PROCEDURE iom_g0d, iom_g1d, iom_g2d, iom_g3d
[544]	73	END INTERFACE
[2528]	74	INTERFACE iom_getatt
[10425]	75	MODULE PROCEDURE iom_g0d_iatt, iom_g1d_iatt, iom_g0d_ratt, iom_g1d_ratt, iom_g0d_catt
[2528]	76	END INTERFACE
[7646]	77	INTERFACE iom_putatt
[10425]	78	MODULE PROCEDURE iom_p0d_iatt, iom_p1d_iatt, iom_p0d_ratt, iom_p1d_ratt, iom_p0d_catt
[7646]	79	END INTERFACE
[544]	80	INTERFACE iom_rstput
[550]	81	MODULE PROCEDURE iom_rp0d, iom_rp1d, iom_rp2d, iom_rp3d
[544]	82	END INTERFACE
[9802]	83	INTERFACE iom_put
[12276]	84	MODULE PROCEDURE iom_p0d, iom_p1d, iom_p2d, iom_p3d, iom_p4d
[9802]	85	END INTERFACE iom_put
	86
[12377]	87	!! * Substitutions
	88	# include "do_loop_substitute.h90"
[544]	89	!!----------------------------------------------------------------------
[9598]	90	!! NEMO/OCE 4.0 , NEMO Consortium (2018)
[1152]	91	!! $Id$
[10068]	92	!! Software governed by the CeCILL license (see ./LICENSE)
[544]	93	!!----------------------------------------------------------------------
	94	CONTAINS
	95
[12377]	96	SUBROUTINE iom_init( cdname, fname, ld_tmppatch, ld_closedef )
[1359]	97	!!----------------------------------------------------------------------
	98	!! * ROUTINE *
	99	!!
	100	!! ** Purpose :
	101	!!
	102	!!----------------------------------------------------------------------
[9903]	103	CHARACTER(len=*), INTENT(in) :: cdname
[9367]	104	CHARACTER(len=*), OPTIONAL, INTENT(in) :: fname
[9903]	105	LOGICAL , OPTIONAL, INTENT(in) :: ld_tmppatch
[12377]	106	LOGICAL , OPTIONAL, INTENT(in) :: ld_closedef
[1412]	107	#if defined key_iomput
[9019]	108	!
[7646]	109	TYPE(xios_duration) :: dtime = xios_duration(0, 0, 0, 0, 0, 0)
	110	TYPE(xios_date) :: start_date
[9367]	111	CHARACTER(len=lc) :: clname
[12276]	112	INTEGER :: irefyear, irefmonth, irefday
[7646]	113	INTEGER :: ji, jkmin
[9367]	114	LOGICAL :: llrst_context ! is context related to restart
[5415]	115	!
[7646]	116	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zt_bnds, zw_bnds
[12377]	117	REAL(wp), DIMENSION(2,jpkam1) :: za_bnds ! ABL vertical boundaries
[9903]	118	LOGICAL :: ll_tmppatch = .TRUE. !: seb: patch before we remove periodicity
	119	INTEGER :: nldi_save, nlei_save !: and close boundaries in output files
	120	INTEGER :: nldj_save, nlej_save !:
[12515]	121	LOGICAL :: ll_closedef
[1359]	122	!!----------------------------------------------------------------------
[9019]	123	!
[9802]	124	! seb: patch before we remove periodicity and close boundaries in output files
[9903]	125	IF( PRESENT(ld_tmppatch) ) THEN ; ll_tmppatch = ld_tmppatch
	126	ELSE ; ll_tmppatch = .TRUE.
	127	ENDIF
	128	IF ( ll_tmppatch ) THEN
[9802]	129	nldi_save = nldi ; nlei_save = nlei
	130	nldj_save = nldj ; nlej_save = nlej
	131	IF( nimpp == 1 ) nldi = 1
	132	IF( nimpp + jpi - 1 == jpiglo ) nlei = jpi
	133	IF( njmpp == 1 ) nldj = 1
	134	IF( njmpp + jpj - 1 == jpjglo ) nlej = jpj
	135	ENDIF
[12515]	136	!
	137	ll_closedef = .TRUE.
[12377]	138	IF ( PRESENT(ld_closedef) ) ll_closedef = ld_closedef
[9802]	139	!
[7646]	140	ALLOCATE( zt_bnds(2,jpk), zw_bnds(2,jpk) )
[9019]	141	!
[4152]	142	clname = cdname
	143	IF( TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(cdname)
[9570]	144	CALL xios_context_initialize(TRIM(clname), mpi_comm_oce)
[4152]	145	CALL iom_swap( cdname )
[9367]	146	llrst_context = (TRIM(cdname) == TRIM(crxios_context) .OR. TRIM(cdname) == TRIM(cwxios_context))
[1359]	147
[7646]	148	! Calendar type is now defined in xml file
[12276]	149	IF (.NOT.(xios_getvar('ref_year' ,irefyear ))) irefyear = 1900
	150	IF (.NOT.(xios_getvar('ref_month',irefmonth))) irefmonth = 01
	151	IF (.NOT.(xios_getvar('ref_day' ,irefday ))) irefday = 01
	152
[1725]	153	SELECT CASE ( nleapy ) ! Choose calendar for IOIPSL
[12276]	154	CASE ( 1) ; CALL xios_define_calendar( TYPE = "Gregorian", time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	155	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[12276]	156	CASE ( 0) ; CALL xios_define_calendar( TYPE = "NoLeap" , time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	157	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[12276]	158	CASE (30) ; CALL xios_define_calendar( TYPE = "D360" , time_origin = xios_date(irefyear,irefmonth,irefday,00,00,00), &
[7646]	159	& start_date = xios_date(nyear,nmonth,nday,0,0,0) )
[1725]	160	END SELECT
[1359]	161
	162	! horizontal grid definition
[9367]	163	IF(.NOT.llrst_context) CALL set_scalar
[9019]	164	!
[5407]	165	IF( TRIM(cdname) == TRIM(cxios_context) ) THEN
[9984]	166	CALL set_grid( "T", glamt, gphit, .FALSE., .FALSE. )
	167	CALL set_grid( "U", glamu, gphiu, .FALSE., .FALSE. )
	168	CALL set_grid( "V", glamv, gphiv, .FALSE., .FALSE. )
	169	CALL set_grid( "W", glamt, gphit, .FALSE., .FALSE. )
[5385]	170	CALL set_grid_znl( gphit )
[5415]	171	!
	172	IF( ln_cfmeta ) THEN ! Add additional grid metadata
[5836]	173	CALL iom_set_domain_attr("grid_T", area = e1e2t(nldi:nlei, nldj:nlej))
	174	CALL iom_set_domain_attr("grid_U", area = e1e2u(nldi:nlei, nldj:nlej))
	175	CALL iom_set_domain_attr("grid_V", area = e1e2v(nldi:nlei, nldj:nlej))
	176	CALL iom_set_domain_attr("grid_W", area = e1e2t(nldi:nlei, nldj:nlej))
[5415]	177	CALL set_grid_bounds( "T", glamf, gphif, glamt, gphit )
	178	CALL set_grid_bounds( "U", glamv, gphiv, glamu, gphiu )
	179	CALL set_grid_bounds( "V", glamu, gphiu, glamv, gphiv )
	180	CALL set_grid_bounds( "W", glamf, gphif, glamt, gphit )
	181	ENDIF
[4152]	182	ENDIF
[9019]	183	!
[5407]	184	IF( TRIM(cdname) == TRIM(cxios_context)//"_crs" ) THEN
[4152]	185	CALL dom_grid_crs ! Save the parent grid information & Switch to coarse grid domain
	186	!
[9984]	187	CALL set_grid( "T", glamt_crs, gphit_crs, .FALSE., .FALSE. )
	188	CALL set_grid( "U", glamu_crs, gphiu_crs, .FALSE., .FALSE. )
	189	CALL set_grid( "V", glamv_crs, gphiv_crs, .FALSE., .FALSE. )
	190	CALL set_grid( "W", glamt_crs, gphit_crs, .FALSE., .FALSE. )
[5385]	191	CALL set_grid_znl( gphit_crs )
[4152]	192	!
	193	CALL dom_grid_glo ! Return to parent grid domain
[5415]	194	!
[9367]	195	IF( ln_cfmeta .AND. .NOT. llrst_context) THEN ! Add additional grid metadata
[5415]	196	CALL iom_set_domain_attr("grid_T", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	197	CALL iom_set_domain_attr("grid_U", area = e1u_crs(nldi:nlei, nldj:nlej) * e2u_crs(nldi:nlei, nldj:nlej))
	198	CALL iom_set_domain_attr("grid_V", area = e1v_crs(nldi:nlei, nldj:nlej) * e2v_crs(nldi:nlei, nldj:nlej))
	199	CALL iom_set_domain_attr("grid_W", area = e1e2t_crs(nldi:nlei, nldj:nlej))
	200	CALL set_grid_bounds( "T", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	201	CALL set_grid_bounds( "U", glamv_crs, gphiv_crs, glamu_crs, gphiu_crs )
	202	CALL set_grid_bounds( "V", glamu_crs, gphiu_crs, glamv_crs, gphiv_crs )
	203	CALL set_grid_bounds( "W", glamf_crs, gphif_crs, glamt_crs, gphit_crs )
	204	ENDIF
[4152]	205	ENDIF
[9019]	206	!
[1359]	207	! vertical grid definition
[9367]	208	IF(.NOT.llrst_context) THEN
[12377]	209	CALL iom_set_axis_attr( "deptht", paxis = gdept_1d )
	210	CALL iom_set_axis_attr( "depthu", paxis = gdept_1d )
	211	CALL iom_set_axis_attr( "depthv", paxis = gdept_1d )
	212	CALL iom_set_axis_attr( "depthw", paxis = gdepw_1d )
[9367]	213
[12377]	214	! ABL
	215	IF( .NOT. ALLOCATED(ght_abl) ) THEN ! force definition for xml files (xios)
	216	ALLOCATE( ght_abl(jpka), ghw_abl(jpka), e3t_abl(jpka), e3w_abl(jpka) ) ! default allocation needed by iom
	217	ght_abl(:) = -1._wp ; ghw_abl(:) = -1._wp
	218	e3t_abl(:) = -1._wp ; e3w_abl(:) = -1._wp
	219	ENDIF
	220	CALL iom_set_axis_attr( "ght_abl", ght_abl(2:jpka) )
	221	CALL iom_set_axis_attr( "ghw_abl", ghw_abl(2:jpka) )
	222
[9367]	223	! Add vertical grid bounds
	224	jkmin = MIN(2,jpk) ! in case jpk=1 (i.e. sas2D)
	225	zt_bnds(2,: ) = gdept_1d(:)
	226	zt_bnds(1,jkmin:jpk) = gdept_1d(1:jpkm1)
	227	zt_bnds(1,1 ) = gdept_1d(1) - e3w_1d(1)
	228	zw_bnds(1,: ) = gdepw_1d(:)
	229	zw_bnds(2,1:jpkm1 ) = gdepw_1d(jkmin:jpk)
	230	zw_bnds(2,jpk: ) = gdepw_1d(jpk) + e3t_1d(jpk)
[12377]	231	CALL iom_set_axis_attr( "deptht", bounds=zw_bnds )
	232	CALL iom_set_axis_attr( "depthu", bounds=zw_bnds )
	233	CALL iom_set_axis_attr( "depthv", bounds=zw_bnds )
	234	CALL iom_set_axis_attr( "depthw", bounds=zt_bnds )
	235
	236	! ABL
	237	za_bnds(1,:) = ghw_abl(1:jpkam1)
	238	za_bnds(2,:) = ghw_abl(2:jpka )
	239	CALL iom_set_axis_attr( "ght_abl", bounds=za_bnds )
	240	za_bnds(1,:) = ght_abl(2:jpka )
	241	za_bnds(2,:) = ght_abl(2:jpka ) + e3w_abl(2:jpka)
	242	CALL iom_set_axis_attr( "ghw_abl", bounds=za_bnds )
	243
[9580]	244	CALL iom_set_axis_attr( "nfloat", (/ (REAL(ji,wp), ji=1,jpnfl) /) )
[9570]	245	# if defined key_si3
[9367]	246	CALL iom_set_axis_attr( "ncatice", (/ (REAL(ji,wp), ji=1,jpl) /) )
	247	! SIMIP diagnostics (4 main arctic straits)
	248	CALL iom_set_axis_attr( "nstrait", (/ (REAL(ji,wp), ji=1,4) /) )
[9019]	249	# endif
[10222]	250	#if defined key_top
[10817]	251	IF( ALLOCATED(profsed) ) CALL iom_set_axis_attr( "profsed", paxis = profsed )
[10222]	252	#endif
[9367]	253	CALL iom_set_axis_attr( "icbcla", class_num )
[10817]	254	CALL iom_set_axis_attr( "iax_20C", (/ REAL(20,wp) /) ) ! strange syntaxe and idea...
[12276]	255	CALL iom_set_axis_attr( "iax_26C", (/ REAL(26,wp) /) ) ! strange syntaxe and idea...
[10817]	256	CALL iom_set_axis_attr( "iax_28C", (/ REAL(28,wp) /) ) ! strange syntaxe and idea...
[12276]	257	CALL iom_set_axis_attr( "basin" , (/ (REAL(ji,wp), ji=1,5) /) )
[9367]	258	ENDIF
	259	!
[1725]	260	! automatic definitions of some of the xml attributs
[9367]	261	IF( TRIM(cdname) == TRIM(crxios_context) ) THEN
	262	!set names of the fields in restart file IF using XIOS to read data
[9984]	263	CALL iom_set_rst_context(.TRUE.)
[9367]	264	CALL iom_set_rst_vars(rst_rfields)
	265	!set which fields are to be read from restart file
	266	CALL iom_set_rstr_active()
	267	ELSE IF( TRIM(cdname) == TRIM(cwxios_context) ) THEN
	268	!set names of the fields in restart file IF using XIOS to write data
[9984]	269	CALL iom_set_rst_context(.FALSE.)
[9367]	270	CALL iom_set_rst_vars(rst_wfields)
	271	!set which fields are to be written to a restart file
	272	CALL iom_set_rstw_active(fname)
	273	ELSE
	274	CALL set_xmlatt
	275	ENDIF
[9019]	276	!
[12377]	277	! set time step length
[12511]	278	dtime%second = rn_Dt
[9019]	279	CALL xios_set_timestep( dtime )
	280	!
[12377]	281	! conditional closure of context definition
	282	IF ( ll_closedef ) CALL iom_init_closedef
	283	!
[7646]	284	DEALLOCATE( zt_bnds, zw_bnds )
[9019]	285	!
[9903]	286	IF ( ll_tmppatch ) THEN
[9802]	287	nldi = nldi_save ; nlei = nlei_save
	288	nldj = nldj_save ; nlej = nlej_save
	289	ENDIF
[1359]	290	#endif
[9019]	291	!
[1359]	292	END SUBROUTINE iom_init
	293
[12377]	294	SUBROUTINE iom_init_closedef
	295	!!----------------------------------------------------------------------
	296	!! * SUBROUTINE iom_init_closedef *
	297	!!----------------------------------------------------------------------
	298	!!
	299	!! ** Purpose : Closure of context definition
	300	!!
	301	!!----------------------------------------------------------------------
	302
	303	#if defined key_iomput
	304	CALL xios_close_context_definition()
	305	CALL xios_update_calendar( 0 )
	306	#else
	307	IF( .FALSE. ) WRITE(numout,*) 'iom_init_closedef: should not see this' ! useless statement to avoid compilation warnings
	308	#endif
	309
	310	END SUBROUTINE iom_init_closedef
	311
[9367]	312	SUBROUTINE iom_set_rstw_var_active(field)
	313	!!---------------------------------------------------------------------
	314	!! * SUBROUTINE iom_set_rstw_var_active *
	315	!!
	316	!! ** Purpose : enable variable in restart file when writing with XIOS
	317	!!---------------------------------------------------------------------
	318	CHARACTER(len = *), INTENT(IN) :: field
	319	INTEGER :: i
	320	LOGICAL :: llis_set
[9535]	321	CHARACTER(LEN=256) :: clinfo ! info character
[1359]	322
[9535]	323	#if defined key_iomput
[9367]	324	llis_set = .FALSE.
	325
	326	DO i = 1, max_rst_fields
	327	IF(TRIM(rst_wfields(i)%vname) == field) THEN
	328	rst_wfields(i)%active = .TRUE.
	329	llis_set = .TRUE.
	330	EXIT
	331	ENDIF
	332	ENDDO
	333	!Warn if variable is not in defined in rst_wfields
	334	IF(.NOT.llis_set) THEN
[10425]	335	WRITE(ctmp1,*) 'iom_set_rstw_var_active: variable ', field ,' is available for writing but not defined'
	336	CALL ctl_stop( 'iom_set_rstw_var_active:', ctmp1 )
[9367]	337	ENDIF
[9535]	338	#else
[9536]	339	clinfo = 'iom_set_rstw_var_active: key_iomput is needed to use XIOS restart read/write functionality'
	340	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	341	#endif
[9367]	342
	343	END SUBROUTINE iom_set_rstw_var_active
	344
	345	SUBROUTINE iom_set_rstr_active()
	346	!!---------------------------------------------------------------------
	347	!! * SUBROUTINE iom_set_rstr_active *
	348	!!
	349	!! ** Purpose : define file name in XIOS context for reading restart file,
	350	!! enable variables present in restart file for reading with XIOS
	351	!!---------------------------------------------------------------------
	352
	353	!sets enabled = .TRUE. for each field in restart file
	354	CHARACTER(len=256) :: rst_file
[9535]	355
	356	#if defined key_iomput
[9367]	357	TYPE(xios_field) :: field_hdl
	358	TYPE(xios_file) :: file_hdl
	359	TYPE(xios_filegroup) :: filegroup_hdl
	360	INTEGER :: i
	361	CHARACTER(lc) :: clpath
	362
	363	clpath = TRIM(cn_ocerst_indir)
	364	IF( clpath(LEN_TRIM(clpath):) /= '/' ) clpath = TRIM(clpath) // '/'
	365	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	366	rst_file = TRIM(clpath)//TRIM(cn_ocerst_in)
	367	ELSE
[12515]	368	rst_file = TRIM(clpath)//TRIM(Agrif_CFixed())//'_'//TRIM(cn_ocerst_in)
[9367]	369	ENDIF
	370	!set name of the restart file and enable available fields
[12515]	371	if(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS) to: ', TRIM(rst_file)
[9367]	372	CALL xios_get_handle("file_definition", filegroup_hdl )
	373	CALL xios_add_child(filegroup_hdl, file_hdl, 'rrestart')
	374	CALL xios_set_file_attr( "rrestart", name=trim(rst_file), type="one_file", &
	375	par_access="collective", enabled=.TRUE., mode="read", &
	376	output_freq=xios_timestep)
	377	!define variables for restart context
	378	DO i = 1, max_rst_fields
	379	IF( TRIM(rst_rfields(i)%vname) /= "NO_NAME") THEN
	380	IF( iom_varid( numror, TRIM(rst_rfields(i)%vname), ldstop = .FALSE. ) > 0 ) THEN
	381	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_rfields(i)%vname))
	382	SELECT CASE (TRIM(rst_rfields(i)%grid))
	383	CASE ("grid_N_3D")
	384	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	385	domain_ref="grid_N", axis_ref="nav_lev", operation = "instant")
	386	CASE ("grid_N")
	387	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	388	domain_ref="grid_N", operation = "instant")
	389	CASE ("grid_vector")
	390	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	391	axis_ref="nav_lev", operation = "instant")
	392	CASE ("grid_scalar")
	393	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_rfields(i)%vname), &
	394	scalar_ref = "grid_scalar", operation = "instant")
	395	END SELECT
	396	IF(lwp) WRITE(numout,*) 'XIOS read: ', TRIM(rst_rfields(i)%vname), ' enabled in ', TRIM(rst_file)
	397	ENDIF
	398	ENDIF
	399	END DO
[9535]	400	#endif
[9367]	401	END SUBROUTINE iom_set_rstr_active
	402
	403	SUBROUTINE iom_set_rstw_core(cdmdl)
	404	!!---------------------------------------------------------------------
	405	!! * SUBROUTINE iom_set_rstw_core *
	406	!!
	407	!! ** Purpose : set variables which are always in restart file
	408	!!---------------------------------------------------------------------
	409	CHARACTER (len=*), INTENT (IN) :: cdmdl ! model OPA or SAS
[9535]	410	CHARACTER(LEN=256) :: clinfo ! info character
	411	#if defined key_iomput
[9367]	412	IF(cdmdl == "OPA") THEN
	413	!from restart.F90
[12515]	414	CALL iom_set_rstw_var_active("rdt")
[9367]	415	IF ( .NOT. ln_diurnal_only ) THEN
	416	CALL iom_set_rstw_var_active('ub' )
	417	CALL iom_set_rstw_var_active('vb' )
	418	CALL iom_set_rstw_var_active('tb' )
	419	CALL iom_set_rstw_var_active('sb' )
	420	CALL iom_set_rstw_var_active('sshb')
	421	!
	422	CALL iom_set_rstw_var_active('un' )
	423	CALL iom_set_rstw_var_active('vn' )
	424	CALL iom_set_rstw_var_active('tn' )
	425	CALL iom_set_rstw_var_active('sn' )
	426	CALL iom_set_rstw_var_active('sshn')
	427	CALL iom_set_rstw_var_active('rhop')
	428	ENDIF
	429	IF(ln_diurnal) CALL iom_set_rstw_var_active('Dsst')
	430	!from trasbc.F90
	431	CALL iom_set_rstw_var_active('sbc_hc_b')
	432	CALL iom_set_rstw_var_active('sbc_sc_b')
	433	ENDIF
[9535]	434	#else
[9536]	435	clinfo = 'iom_set_rstw_core: key_iomput is needed to use XIOS restart read/write functionality'
	436	CALL ctl_stop('STOP', TRIM(clinfo))
[9535]	437	#endif
[9367]	438	END SUBROUTINE iom_set_rstw_core
	439
	440	SUBROUTINE iom_set_rst_vars(fields)
	441	!!---------------------------------------------------------------------
[9535]	442	!! * SUBROUTINE iom_set_rst_vars *
[9367]	443	!!
	444	!! ** Purpose : Fill array fields with the information about all
	445	!! possible variables and corresponding grids definition
	446	!! for reading/writing restart with XIOS
	447	!!---------------------------------------------------------------------
	448	TYPE(RST_FIELD), INTENT(INOUT) :: fields(max_rst_fields)
[9535]	449	INTEGER :: i
[9367]	450
	451	i = 0
[12515]	452	i = i + 1; fields(i)%vname="rdt"; fields(i)%grid="grid_scalar"
[9367]	453	i = i + 1; fields(i)%vname="un"; fields(i)%grid="grid_N_3D"
	454	i = i + 1; fields(i)%vname="ub"; fields(i)%grid="grid_N_3D"
	455	i = i + 1; fields(i)%vname="vn"; fields(i)%grid="grid_N_3D"
	456	i = i + 1; fields(i)%vname="vb"; fields(i)%grid="grid_N_3D"
	457	i = i + 1; fields(i)%vname="tn"; fields(i)%grid="grid_N_3D"
	458	i = i + 1; fields(i)%vname="tb"; fields(i)%grid="grid_N_3D"
	459	i = i + 1; fields(i)%vname="sn"; fields(i)%grid="grid_N_3D"
	460	i = i + 1; fields(i)%vname="sb"; fields(i)%grid="grid_N_3D"
	461	i = i + 1; fields(i)%vname="sshn"; fields(i)%grid="grid_N"
	462	i = i + 1; fields(i)%vname="sshb"; fields(i)%grid="grid_N"
	463	i = i + 1; fields(i)%vname="rhop"; fields(i)%grid="grid_N_3D"
	464	i = i + 1; fields(i)%vname="kt"; fields(i)%grid="grid_scalar"
	465	i = i + 1; fields(i)%vname="ndastp"; fields(i)%grid="grid_scalar"
	466	i = i + 1; fields(i)%vname="adatrj"; fields(i)%grid="grid_scalar"
	467	i = i + 1; fields(i)%vname="utau_b"; fields(i)%grid="grid_N"
	468	i = i + 1; fields(i)%vname="vtau_b"; fields(i)%grid="grid_N"
	469	i = i + 1; fields(i)%vname="qns_b"; fields(i)%grid="grid_N"
	470	i = i + 1; fields(i)%vname="emp_b"; fields(i)%grid="grid_N"
	471	i = i + 1; fields(i)%vname="sfx_b"; fields(i)%grid="grid_N"
	472	i = i + 1; fields(i)%vname="en" ; fields(i)%grid="grid_N_3D"
	473	i = i + 1; fields(i)%vname="avt_k"; fields(i)%grid="grid_N_3D"
	474	i = i + 1; fields(i)%vname="avm_k"; fields(i)%grid="grid_N_3D"
	475	i = i + 1; fields(i)%vname="dissl"; fields(i)%grid="grid_N_3D"
	476	i = i + 1; fields(i)%vname="sbc_hc_b"; fields(i)%grid="grid_N"
	477	i = i + 1; fields(i)%vname="sbc_sc_b"; fields(i)%grid="grid_N"
	478	i = i + 1; fields(i)%vname="qsr_hc_b"; fields(i)%grid="grid_N_3D"
	479	i = i + 1; fields(i)%vname="fraqsr_1lev"; fields(i)%grid="grid_N"
	480	i = i + 1; fields(i)%vname="greenland_icesheet_mass"
	481	fields(i)%grid="grid_scalar"
	482	i = i + 1; fields(i)%vname="greenland_icesheet_timelapsed"
	483	fields(i)%grid="grid_scalar"
	484	i = i + 1; fields(i)%vname="greenland_icesheet_mass_roc"
	485	fields(i)%grid="grid_scalar"
	486	i = i + 1; fields(i)%vname="antarctica_icesheet_mass"
	487	fields(i)%grid="grid_scalar"
	488	i = i + 1; fields(i)%vname="antarctica_icesheet_timelapsed"
	489	fields(i)%grid="grid_scalar"
	490	i = i + 1; fields(i)%vname="antarctica_icesheet_mass_roc"
	491	fields(i)%grid="grid_scalar"
	492	i = i + 1; fields(i)%vname="frc_v"; fields(i)%grid="grid_scalar"
	493	i = i + 1; fields(i)%vname="frc_t"; fields(i)%grid="grid_scalar"
	494	i = i + 1; fields(i)%vname="frc_s"; fields(i)%grid="grid_scalar"
	495	i = i + 1; fields(i)%vname="frc_wn_t"; fields(i)%grid="grid_scalar"
	496	i = i + 1; fields(i)%vname="frc_wn_s"; fields(i)%grid="grid_scalar"
	497	i = i + 1; fields(i)%vname="ssh_ini"; fields(i)%grid="grid_N"
	498	i = i + 1; fields(i)%vname="e3t_ini"; fields(i)%grid="grid_N_3D"
	499	i = i + 1; fields(i)%vname="hc_loc_ini"; fields(i)%grid="grid_N_3D"
	500	i = i + 1; fields(i)%vname="sc_loc_ini"; fields(i)%grid="grid_N_3D"
	501	i = i + 1; fields(i)%vname="ssh_hc_loc_ini"; fields(i)%grid="grid_N"
	502	i = i + 1; fields(i)%vname="ssh_sc_loc_ini"; fields(i)%grid="grid_N"
	503	i = i + 1; fields(i)%vname="tilde_e3t_b"; fields(i)%grid="grid_N"
	504	i = i + 1; fields(i)%vname="tilde_e3t_n"; fields(i)%grid="grid_N"
	505	i = i + 1; fields(i)%vname="hdiv_lf"; fields(i)%grid="grid_N"
	506	i = i + 1; fields(i)%vname="ub2_b"; fields(i)%grid="grid_N"
	507	i = i + 1; fields(i)%vname="vb2_b"; fields(i)%grid="grid_N"
	508	i = i + 1; fields(i)%vname="sshbb_e"; fields(i)%grid="grid_N"
	509	i = i + 1; fields(i)%vname="ubb_e"; fields(i)%grid="grid_N"
	510	i = i + 1; fields(i)%vname="vbb_e"; fields(i)%grid="grid_N"
	511	i = i + 1; fields(i)%vname="sshb_e"; fields(i)%grid="grid_N"
	512	i = i + 1; fields(i)%vname="ub_e"; fields(i)%grid="grid_N"
	513	i = i + 1; fields(i)%vname="vb_e"; fields(i)%grid="grid_N"
	514	i = i + 1; fields(i)%vname="fwf_isf_b"; fields(i)%grid="grid_N"
	515	i = i + 1; fields(i)%vname="isf_sc_b"; fields(i)%grid="grid_N"
	516	i = i + 1; fields(i)%vname="isf_hc_b"; fields(i)%grid="grid_N"
	517	i = i + 1; fields(i)%vname="ssh_ibb"; fields(i)%grid="grid_N"
	518	i = i + 1; fields(i)%vname="rnf_b"; fields(i)%grid="grid_N"
	519	i = i + 1; fields(i)%vname="rnf_hc_b"; fields(i)%grid="grid_N"
	520	i = i + 1; fields(i)%vname="rnf_sc_b"; fields(i)%grid="grid_N"
	521	i = i + 1; fields(i)%vname="nn_fsbc"; fields(i)%grid="grid_scalar"
	522	i = i + 1; fields(i)%vname="ssu_m"; fields(i)%grid="grid_N"
	523	i = i + 1; fields(i)%vname="ssv_m"; fields(i)%grid="grid_N"
	524	i = i + 1; fields(i)%vname="sst_m"; fields(i)%grid="grid_N"
	525	i = i + 1; fields(i)%vname="sss_m"; fields(i)%grid="grid_N"
	526	i = i + 1; fields(i)%vname="ssh_m"; fields(i)%grid="grid_N"
	527	i = i + 1; fields(i)%vname="e3t_m"; fields(i)%grid="grid_N"
	528	i = i + 1; fields(i)%vname="frq_m"; fields(i)%grid="grid_N"
	529	i = i + 1; fields(i)%vname="avmb"; fields(i)%grid="grid_vector"
	530	i = i + 1; fields(i)%vname="avtb"; fields(i)%grid="grid_vector"
	531	i = i + 1; fields(i)%vname="ub2_i_b"; fields(i)%grid="grid_N"
	532	i = i + 1; fields(i)%vname="vb2_i_b"; fields(i)%grid="grid_N"
	533	i = i + 1; fields(i)%vname="ntime"; fields(i)%grid="grid_scalar"
	534	i = i + 1; fields(i)%vname="Dsst"; fields(i)%grid="grid_scalar"
	535	i = i + 1; fields(i)%vname="tmask"; fields(i)%grid="grid_N_3D"
	536	i = i + 1; fields(i)%vname="umask"; fields(i)%grid="grid_N_3D"
	537	i = i + 1; fields(i)%vname="vmask"; fields(i)%grid="grid_N_3D"
	538	i = i + 1; fields(i)%vname="smask"; fields(i)%grid="grid_N_3D"
	539	i = i + 1; fields(i)%vname="gdepw_n"; fields(i)%grid="grid_N_3D"
	540	i = i + 1; fields(i)%vname="e3t_n"; fields(i)%grid="grid_N_3D"
	541	i = i + 1; fields(i)%vname="e3u_n"; fields(i)%grid="grid_N_3D"
	542	i = i + 1; fields(i)%vname="e3v_n"; fields(i)%grid="grid_N_3D"
	543	i = i + 1; fields(i)%vname="surf_ini"; fields(i)%grid="grid_N"
	544	i = i + 1; fields(i)%vname="e3t_b"; fields(i)%grid="grid_N_3D"
	545	i = i + 1; fields(i)%vname="hmxl_n"; fields(i)%grid="grid_N_3D"
	546	i = i + 1; fields(i)%vname="un_bf"; fields(i)%grid="grid_N"
	547	i = i + 1; fields(i)%vname="vn_bf"; fields(i)%grid="grid_N"
	548	i = i + 1; fields(i)%vname="hbl"; fields(i)%grid="grid_N"
	549	i = i + 1; fields(i)%vname="hbli"; fields(i)%grid="grid_N"
	550	i = i + 1; fields(i)%vname="wn"; fields(i)%grid="grid_N_3D"
	551
	552	IF( i-1 > max_rst_fields) THEN
[10425]	553	WRITE(ctmp1,*) 'E R R O R : iom_set_rst_vars SIZE of RST_FIELD array is too small'
	554	CALL ctl_stop( 'iom_set_rst_vars:', ctmp1 )
[9367]	555	ENDIF
	556	END SUBROUTINE iom_set_rst_vars
	557
	558
	559	SUBROUTINE iom_set_rstw_active(cdrst_file)
	560	!!---------------------------------------------------------------------
[9535]	561	!! * SUBROUTINE iom_set_rstw_active *
[9367]	562	!!
	563	!! ** Purpose : define file name in XIOS context for writing restart
	564	!! enable variables present in restart file for writing
	565	!!---------------------------------------------------------------------
	566	!sets enabled = .TRUE. for each field in restart file
	567	CHARACTER(len=*) :: cdrst_file
	568	#if defined key_iomput
	569	TYPE(xios_field) :: field_hdl
	570	TYPE(xios_file) :: file_hdl
	571	TYPE(xios_filegroup) :: filegroup_hdl
	572	INTEGER :: i
	573	CHARACTER(lc) :: clpath
	574
	575	!set name of the restart file and enable available fields
	576	IF(lwp) WRITE(numout,*) 'Setting restart filename (for XIOS write) to: ',cdrst_file
	577	CALL xios_get_handle("file_definition", filegroup_hdl )
	578	CALL xios_add_child(filegroup_hdl, file_hdl, 'wrestart')
	579	IF(nxioso.eq.1) THEN
	580	CALL xios_set_file_attr( "wrestart", type="one_file", enabled=.TRUE.,&
	581	mode="write", output_freq=xios_timestep)
	582	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in one_file mode'
	583	ELSE
	584	CALL xios_set_file_attr( "wrestart", type="multiple_file", enabled=.TRUE.,&
	585	mode="write", output_freq=xios_timestep)
	586	if(lwp) write(numout,*) 'OPEN ', trim(cdrst_file), ' in multiple_file mode'
	587	ENDIF
	588	CALL xios_set_file_attr( "wrestart", name=trim(cdrst_file))
	589	!define fields for restart context
	590	DO i = 1, max_rst_fields
	591	IF( rst_wfields(i)%active ) THEN
	592	CALL xios_add_child(file_hdl, field_hdl, TRIM(rst_wfields(i)%vname))
	593	SELECT CASE (TRIM(rst_wfields(i)%grid))
	594	CASE ("grid_N_3D")
	595	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	596	domain_ref="grid_N", axis_ref="nav_lev", prec = 8, operation = "instant")
	597	CASE ("grid_N")
	598	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	599	domain_ref="grid_N", prec = 8, operation = "instant")
	600	CASE ("grid_vector")
	601	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	602	axis_ref="nav_lev", prec = 8, operation = "instant")
	603	CASE ("grid_scalar")
	604	CALL xios_set_attr (field_hdl, enabled = .TRUE., name = TRIM(rst_wfields(i)%vname), &
	605	scalar_ref = "grid_scalar", prec = 8, operation = "instant")
	606	END SELECT
	607	ENDIF
	608	END DO
	609	#endif
	610	END SUBROUTINE iom_set_rstw_active
	611
[9984]	612	SUBROUTINE iom_set_rst_context(ld_rstr)
[9367]	613	!!---------------------------------------------------------------------
[9535]	614	!! * SUBROUTINE iom_set_rst_context *
[9367]	615	!!
	616	!! ** Purpose : Define domain, axis and grid for restart (read/write)
	617	!! context
	618	!!
	619	!!---------------------------------------------------------------------
[9984]	620	LOGICAL, INTENT(IN) :: ld_rstr
	621	!ld_rstr is true for restart context. There is no need to define grid for
	622	!restart read, because it's read from file
[9367]	623	#if defined key_iomput
	624	TYPE(xios_domaingroup) :: domaingroup_hdl
	625	TYPE(xios_domain) :: domain_hdl
	626	TYPE(xios_axisgroup) :: axisgroup_hdl
	627	TYPE(xios_axis) :: axis_hdl
	628	TYPE(xios_scalar) :: scalar_hdl
	629	TYPE(xios_scalargroup) :: scalargroup_hdl
	630
	631	CALL xios_get_handle("domain_definition",domaingroup_hdl)
	632	CALL xios_add_child(domaingroup_hdl, domain_hdl, "grid_N")
[9984]	633	CALL set_grid("N", glamt, gphit, .TRUE., ld_rstr)
[9367]	634
	635	CALL xios_get_handle("axis_definition",axisgroup_hdl)
	636	CALL xios_add_child(axisgroup_hdl, axis_hdl, "nav_lev")
	637	!AGRIF fails to compile when unit= is in call to xios_set_axis_attr
	638	! CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels", unit="m", positive="down")
	639	CALL xios_set_axis_attr( "nav_lev", long_name="Vertical levels in meters", positive="down")
	640	CALL iom_set_axis_attr( "nav_lev", paxis = gdept_1d )
	641
	642	CALL xios_get_handle("scalar_definition", scalargroup_hdl)
	643	CALL xios_add_child(scalargroup_hdl, scalar_hdl, "grid_scalar")
	644	#endif
	645	END SUBROUTINE iom_set_rst_context
	646
[4152]	647	SUBROUTINE iom_swap( cdname )
[1793]	648	!!---------------------------------------------------------------------
	649	!! * SUBROUTINE iom_swap *
	650	!!
	651	!! ** Purpose : swap context between different agrif grid for xmlio_server
	652	!!---------------------------------------------------------------------
[4152]	653	CHARACTER(len=*), INTENT(in) :: cdname
[1793]	654	#if defined key_iomput
[3695]	655	TYPE(xios_context) :: nemo_hdl
[1793]	656
[4152]	657	IF( TRIM(Agrif_CFixed()) == '0' ) THEN
	658	CALL xios_get_handle(TRIM(cdname),nemo_hdl)
	659	ELSE
	660	CALL xios_get_handle(TRIM(Agrif_CFixed())//"_"//TRIM(cdname),nemo_hdl)
	661	ENDIF
	662	!
	663	CALL xios_set_current_context(nemo_hdl)
[1793]	664	#endif
[4152]	665	!
[1793]	666	END SUBROUTINE iom_swap
	667
	668
[10425]	669	SUBROUTINE iom_open( cdname, kiomid, ldwrt, kdom, ldstop, ldiof, kdlev )
[544]	670	!!---------------------------------------------------------------------
	671	!! * SUBROUTINE iom_open *
	672	!!
	673	!! ** Purpose : open an input file (return 0 if not found)
	674	!!---------------------------------------------------------------------
	675	CHARACTER(len=*), INTENT(in ) :: cdname ! File name
	676	INTEGER , INTENT( out) :: kiomid ! iom identifier of the opened file
	677	LOGICAL , INTENT(in ), OPTIONAL :: ldwrt ! open in write modeb (default = .FALSE.)
	678	INTEGER , INTENT(in ), OPTIONAL :: kdom ! Type of domain to be written (default = jpdom_local_noovlap)
[679]	679	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if open to read a non-existing file (default = .TRUE.)
[1319]	680	LOGICAL , INTENT(in ), OPTIONAL :: ldiof ! Interp On the Fly, needed for AGRIF (default = .FALSE.)
[9019]	681	INTEGER , INTENT(in ), OPTIONAL :: kdlev ! number of vertical levels
	682	!
[4148]	683	CHARACTER(LEN=256) :: clname ! the name of the file based on cdname [[+clcpu]+clcpu]
	684	CHARACTER(LEN=256) :: cltmpn ! tempory name to store clname (in writting mode)
[6140]	685	CHARACTER(LEN=10) :: clsuffix ! ".nc"
[550]	686	CHARACTER(LEN=15) :: clcpu ! the cpu number (max jpmax_digits digits)
[4148]	687	CHARACTER(LEN=256) :: clinfo ! info character
[544]	688	LOGICAL :: llok ! check the existence
[679]	689	LOGICAL :: llwrt ! local definition of ldwrt
[1200]	690	LOGICAL :: llnoov ! local definition to read overlap
[679]	691	LOGICAL :: llstop ! local definition of ldstop
[1319]	692	LOGICAL :: lliof ! local definition of ldiof
[544]	693	INTEGER :: icnt ! counter for digits in clcpu (max = jpmax_digits)
	694	INTEGER :: iln, ils ! lengths of character
	695	INTEGER :: idom ! type of domain
	696	INTEGER :: istop !
	697	INTEGER, DIMENSION(2,5) :: idompar ! domain parameters:
	698	! local number of points for x,y dimensions
	699	! position of first local point for x,y dimensions
	700	! position of last local point for x,y dimensions
	701	! start halo size for x,y dimensions
	702	! end halo size for x,y dimensions
	703	!---------------------------------------------------------------------
	704	! Initializations and control
	705	! =============
[1341]	706	kiomid = -1
[544]	707	clinfo = ' iom_open ~~~ '
	708	istop = nstop
	709	! if iom_open is called for the first time: initialize iom_file(:)%nfid to 0
	710	! (could be done when defining iom_file in f95 but not in f90)
[1441]	711	IF( Agrif_Root() ) THEN
	712	IF( iom_open_init == 0 ) THEN
	713	iom_file(:)%nfid = 0
	714	iom_open_init = 1
	715	ENDIF
[1409]	716	ENDIF
[544]	717	! do we read or write the file?
	718	IF( PRESENT(ldwrt) ) THEN ; llwrt = ldwrt
	719	ELSE ; llwrt = .FALSE.
	720	ENDIF
[679]	721	! do we call ctl_stop if we try to open a non-existing file in read mode?
	722	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	723	ELSE ; llstop = .TRUE.
	724	ENDIF
[1319]	725	! are we using interpolation on the fly?
	726	IF( PRESENT(ldiof) ) THEN ; lliof = ldiof
	727	ELSE ; lliof = .FALSE.
	728	ENDIF
[1200]	729	! do we read the overlap
	730	! ugly patch SM+JMM+RB to overwrite global definition in some cases
[10016]	731	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
[544]	732	! create the file name by added, if needed, TRIM(Agrif_CFixed()) and TRIM(clsuffix)
	733	! =============
	734	clname = trim(cdname)
[1319]	735	IF ( .NOT. Agrif_Root() .AND. .NOT. lliof ) THEN
[12377]	736	iln = INDEX(clname,'/')
[1200]	737	cltmpn = clname(1:iln)
	738	clname = clname(iln+1:LEN_TRIM(clname))
	739	clname=TRIM(cltmpn)//TRIM(Agrif_CFixed())//'_'//TRIM(clname)
	740	ENDIF
[544]	741	! which suffix should we use?
[10425]	742	clsuffix = '.nc'
[544]	743	! Add the suffix if needed
	744	iln = LEN_TRIM(clname)
	745	ils = LEN_TRIM(clsuffix)
[742]	746	IF( iln <= ils .OR. INDEX( TRIM(clname), TRIM(clsuffix), back = .TRUE. ) /= iln - ils + 1 ) &
	747	& clname = TRIM(clname)//TRIM(clsuffix)
[544]	748	cltmpn = clname ! store this name
	749	! try to find if the file to be opened already exist
	750	! =============
	751	INQUIRE( FILE = clname, EXIST = llok )
	752	IF( .NOT.llok ) THEN
	753	! we try to add the cpu number to the name
[6140]	754	WRITE(clcpu,*) narea-1
	755
[544]	756	clcpu = TRIM(ADJUSTL(clcpu))
[679]	757	iln = INDEX(clname,TRIM(clsuffix), back = .TRUE.)
[544]	758	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	759	icnt = 0
	760	INQUIRE( FILE = clname, EXIST = llok )
	761	! we try different formats for the cpu number by adding 0
	762	DO WHILE( .NOT.llok .AND. icnt < jpmax_digits )
	763	clcpu = "0"//trim(clcpu)
	764	clname = clname(1:iln-1)//'_'//TRIM(clcpu)//TRIM(clsuffix)
	765	INQUIRE( FILE = clname, EXIST = llok )
	766	icnt = icnt + 1
	767	END DO
[9367]	768	ELSE
	769	lxios_sini = .TRUE.
[544]	770	ENDIF
[679]	771	IF( llwrt ) THEN
	772	! check the domain definition
	773	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	774	! idom = jpdom_local_noovlap ! default definition
[1200]	775	IF( llnoov ) THEN ; idom = jpdom_local_noovlap ! default definition
	776	ELSE ; idom = jpdom_local_full ! default definition
[679]	777	ENDIF
	778	IF( PRESENT(kdom) ) idom = kdom
	779	! create the domain informations
	780	! =============
	781	SELECT CASE (idom)
	782	CASE (jpdom_local_full)
	783	idompar(:,1) = (/ jpi , jpj /)
	784	idompar(:,2) = (/ nimpp , njmpp /)
	785	idompar(:,3) = (/ nimpp + jpi - 1 , njmpp + jpj - 1 /)
	786	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	787	idompar(:,5) = (/ jpi - nlei , jpj - nlej /)
	788	CASE (jpdom_local_noextra)
	789	idompar(:,1) = (/ nlci , nlcj /)
	790	idompar(:,2) = (/ nimpp , njmpp /)
	791	idompar(:,3) = (/ nimpp + nlci - 1, njmpp + nlcj - 1 /)
	792	idompar(:,4) = (/ nldi - 1 , nldj - 1 /)
	793	idompar(:,5) = (/ nlci - nlei , nlcj - nlej /)
	794	CASE (jpdom_local_noovlap)
	795	idompar(:,1) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	796	idompar(:,2) = (/ nimpp + nldi - 1, njmpp + nldj - 1 /)
	797	idompar(:,3) = (/ nimpp + nlei - 1, njmpp + nlej - 1 /)
	798	idompar(:,4) = (/ 0 , 0 /)
	799	idompar(:,5) = (/ 0 , 0 /)
	800	CASE DEFAULT
	801	CALL ctl_stop( TRIM(clinfo), 'wrong value of kdom, only jpdom_local* cases are accepted' )
	802	END SELECT
	803	ENDIF
[6140]	804	! Open the NetCDF file
[544]	805	! =============
	806	! do we have some free file identifier?
	807	IF( MINVAL(iom_file(:)%nfid) /= 0 ) &
[679]	808	& CALL ctl_stop( TRIM(clinfo), 'No more free file identifier', 'increase jpmax_files in iom_def' )
	809	! if no file was found...
	810	IF( .NOT. llok ) THEN
	811	IF( .NOT. llwrt ) THEN ! we are in read mode
	812	IF( llstop ) THEN ; CALL ctl_stop( TRIM(clinfo), 'File '//TRIM(cltmpn)//'* not found' )
	813	ELSE ; istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
	814	ENDIF
	815	ELSE ! we are in write mode so we
	816	clname = cltmpn ! get back the file name without the cpu number
	817	ENDIF
[2586]	818	ELSE
	819	IF( llwrt .AND. .NOT. ln_clobber ) THEN ! we stop as we want to write in a new file
	820	CALL ctl_stop( TRIM(clinfo), 'We want to write in a new file but '//TRIM(clname)//' already exists...' )
	821	istop = nstop + 1 ! make sure that istop /= nstop so we don't open the file
[4650]	822	ELSEIF( llwrt ) THEN ! the file exists and we are in write mode with permission to
	823	clname = cltmpn ! overwrite so get back the file name without the cpu number
[2586]	824	ENDIF
[679]	825	ENDIF
[544]	826	IF( istop == nstop ) THEN ! no error within this routine
[10425]	827	CALL iom_nf90_open( clname, kiomid, llwrt, llok, idompar, kdlev = kdlev )
[544]	828	ENDIF
	829	!
	830	END SUBROUTINE iom_open
	831
	832
	833	SUBROUTINE iom_close( kiomid )
	834	!!--------------------------------------------------------------------
	835	!! * SUBROUTINE iom_close *
	836	!!
	837	!! ** Purpose : close an input file, or all files opened by iom
	838	!!--------------------------------------------------------------------
[1131]	839	INTEGER, INTENT(inout), OPTIONAL :: kiomid ! iom identifier of the file to be closed
	840	! ! return 0 when file is properly closed
	841	! ! No argument: all files opened by iom are closed
[544]	842
	843	INTEGER :: jf ! dummy loop indices
	844	INTEGER :: i_s, i_e ! temporary integer
	845	CHARACTER(LEN=100) :: clinfo ! info character
	846	!---------------------------------------------------------------------
	847	!
[12283]	848	IF( iom_open_init == 0 ) RETURN ! avoid to use iom_file(jf)%nfid that us not yet initialized
	849	!
[544]	850	clinfo = ' iom_close ~~~ '
	851	IF( PRESENT(kiomid) ) THEN
	852	i_s = kiomid
	853	i_e = kiomid
	854	ELSE
	855	i_s = 1
	856	i_e = jpmax_files
	857	ENDIF
	858
	859	IF( i_s > 0 ) THEN
	860	DO jf = i_s, i_e
	861	IF( iom_file(jf)%nfid > 0 ) THEN
[10425]	862	CALL iom_nf90_close( jf )
[1131]	863	iom_file(jf)%nfid = 0 ! free the id
	864	IF( PRESENT(kiomid) ) kiomid = 0 ! return 0 as id to specify that the file was closed
[679]	865	IF(lwp) WRITE(numout,*) TRIM(clinfo)//' close file: '//TRIM(iom_file(jf)%name)//' ok'
[544]	866	ELSEIF( PRESENT(kiomid) ) THEN
	867	WRITE(ctmp1,*) '--->', kiomid
	868	CALL ctl_stop( TRIM(clinfo)//' Invalid file identifier', ctmp1 )
	869	ENDIF
	870	END DO
	871	ENDIF
	872	!
	873	END SUBROUTINE iom_close
	874
	875
[11536]	876	FUNCTION iom_varid ( kiomid, cdvar, kdimsz, kndims, lduld, ldstop )
[544]	877	!!-----------------------------------------------------------------------
	878	!! * FUNCTION iom_varid *
	879	!!
	880	!! ** Purpose : get the id of a variable in a file (return 0 if not found)
	881	!!-----------------------------------------------------------------------
	882	INTEGER , INTENT(in ) :: kiomid ! file Identifier
	883	CHARACTER(len=*) , INTENT(in ) :: cdvar ! name of the variable
[9540]	884	INTEGER, DIMENSION(:), INTENT( out), OPTIONAL :: kdimsz ! size of each dimension
[11536]	885	INTEGER , INTENT( out), OPTIONAL :: kndims ! number of dimensions
	886	LOGICAL , INTENT( out), OPTIONAL :: lduld ! true if the last dimension is unlimited (time)
[745]	887	LOGICAL , INTENT(in ), OPTIONAL :: ldstop ! stop if looking for non-existing variable (default = .TRUE.)
[544]	888	!
	889	INTEGER :: iom_varid, iiv, i_nvd
	890	LOGICAL :: ll_fnd
	891	CHARACTER(LEN=100) :: clinfo ! info character
[745]	892	LOGICAL :: llstop ! local definition of ldstop
[544]	893	!!-----------------------------------------------------------------------
	894	iom_varid = 0 ! default definition
[745]	895	! do we call ctl_stop if we look for non-existing variable?
	896	IF( PRESENT(ldstop) ) THEN ; llstop = ldstop
	897	ELSE ; llstop = .TRUE.
	898	ENDIF
[544]	899	!
	900	IF( kiomid > 0 ) THEN
[679]	901	clinfo = 'iom_varid, file: '//trim(iom_file(kiomid)%name)//', var: '//trim(cdvar)
[544]	902	IF( iom_file(kiomid)%nfid == 0 ) THEN
	903	CALL ctl_stop( trim(clinfo), 'the file is not open' )
	904	ELSE
	905	ll_fnd = .FALSE.
	906	iiv = 0
	907	!
	908	DO WHILE ( .NOT.ll_fnd .AND. iiv < iom_file(kiomid)%nvars )
	909	iiv = iiv + 1
	910	ll_fnd = ( TRIM(cdvar) == TRIM(iom_file(kiomid)%cn_var(iiv)) )
	911	END DO
	912	!
	913	IF( .NOT.ll_fnd ) THEN
	914	iiv = iiv + 1
	915	IF( iiv <= jpmax_vars ) THEN
[11536]	916	iom_varid = iom_nf90_varid( kiomid, cdvar, iiv, kdimsz, kndims, lduld )
[544]	917	ELSE
	918	CALL ctl_stop( trim(clinfo), 'Too many variables in the file '//iom_file(kiomid)%name, &
[10425]	919	& 'increase the parameter jpmax_vars')
[544]	920	ENDIF
[745]	921	IF( llstop .AND. iom_varid == -1 ) CALL ctl_stop( TRIM(clinfo)//' not found' )
[544]	922	ELSE
	923	iom_varid = iiv
	924	IF( PRESENT(kdimsz) ) THEN
	925	i_nvd = iom_file(kiomid)%ndims(iiv)
[9540]	926	IF( i_nvd <= size(kdimsz) ) THEN
	927	kdimsz(1:i_nvd) = iom_file(kiomid)%dimsz(1:i_nvd,iiv)
[544]	928	ELSE
	929	WRITE(ctmp1,*) i_nvd, size(kdimsz)
	930	CALL ctl_stop( trim(clinfo), 'error in kdimsz size'//trim(ctmp1) )
	931	ENDIF
	932	ENDIF
[4205]	933	IF( PRESENT(kndims) ) kndims = iom_file(kiomid)%ndims(iiv)
[11536]	934	IF( PRESENT( lduld) ) lduld = iom_file(kiomid)%luld( iiv)
[544]	935	ENDIF
	936	ENDIF
	937	ENDIF
	938	!
	939	END FUNCTION iom_varid
	940
	941
	942	!!----------------------------------------------------------------------
	943	!! INTERFACE iom_get
	944	!!----------------------------------------------------------------------
[9367]	945	SUBROUTINE iom_g0d( kiomid, cdvar, pvar, ktime, ldxios )
[544]	946	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	947	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	948	REAL(wp) , INTENT( out) :: pvar ! read field
[4245]	949	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
[9367]	950	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use xios to read restart
[544]	951	!
[4245]	952	INTEGER :: idvar ! variable id
	953	INTEGER :: idmspc ! number of spatial dimensions
	954	INTEGER , DIMENSION(1) :: itime ! record number
	955	CHARACTER(LEN=100) :: clinfo ! info character
	956	CHARACTER(LEN=100) :: clname ! file name
	957	CHARACTER(LEN=1) :: cldmspc !
[9367]	958	LOGICAL :: llxios
[544]	959	!
[9367]	960	llxios = .FALSE.
	961	IF( PRESENT(ldxios) ) llxios = ldxios
	962
	963	IF(.NOT.llxios) THEN ! read data using default library
	964	itime = 1
	965	IF( PRESENT(ktime) ) itime = ktime
	966	!
	967	clname = iom_file(kiomid)%name
	968	clinfo = ' iom_g0d, file: '//trim(clname)//', var: '//trim(cdvar)
	969	!
	970	IF( kiomid > 0 ) THEN
	971	idvar = iom_varid( kiomid, cdvar )
	972	IF( iom_file(kiomid)%nfid > 0 .AND. idvar > 0 ) THEN
	973	idmspc = iom_file ( kiomid )%ndims( idvar )
	974	IF( iom_file(kiomid)%luld(idvar) ) idmspc = idmspc - 1
	975	WRITE(cldmspc , fmt='(i1)') idmspc
	976	IF( idmspc > 0 ) CALL ctl_stop( TRIM(clinfo), 'When reading to a 0D array, we do not accept data', &
	977	& 'with 1 or more spatial dimensions: '//cldmspc//' were found.' , &
	978	& 'Use ncwa -a to suppress the unnecessary dimensions' )
[10425]	979	CALL iom_nf90_get( kiomid, idvar, pvar, itime )
[9367]	980	ENDIF
[679]	981	ENDIF
[9367]	982	ELSE
[9535]	983	#if defined key_iomput
[9367]	984	IF(lwp) WRITE(numout,*) 'XIOS RST READ (0D): ', trim(cdvar)
	985	CALL iom_swap( TRIM(crxios_context) )
	986	CALL xios_recv_field( trim(cdvar), pvar)
	987	CALL iom_swap( TRIM(cxios_context) )
[9535]	988	#else
[10425]	989	WRITE(ctmp1,*) 'Can not use XIOS in iom_g0d, file: '//trim(clname)//', var:'//trim(cdvar)
	990	CALL ctl_stop( 'iom_g0d', ctmp1 )
[9535]	991	#endif
[679]	992	ENDIF
[550]	993	END SUBROUTINE iom_g0d
[544]	994
[9367]	995	SUBROUTINE iom_g1d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, ldxios )
[544]	996	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	997	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	998	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	999	REAL(wp) , INTENT( out), DIMENSION(:) :: pvar ! read field
	1000	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1001	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kstart ! start axis position of the reading
	1002	INTEGER , INTENT(in ), DIMENSION(1), OPTIONAL :: kcount ! number of points in each axis
[9367]	1003	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1004	!
[679]	1005	IF( kiomid > 0 ) THEN
	1006	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r1d=pvar, &
[9367]	1007	& ktime=ktime, kstart=kstart, kcount=kcount, &
	1008	& ldxios=ldxios )
[679]	1009	ENDIF
[550]	1010	END SUBROUTINE iom_g1d
[544]	1011
[9367]	1012	SUBROUTINE iom_g2d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios)
[544]	1013	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1014	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1015	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1016	REAL(wp) , INTENT( out), DIMENSION(:,:) :: pvar ! read field
	1017	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1018	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kstart ! start axis position of the reading
	1019	INTEGER , INTENT(in ), DIMENSION(2) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1020	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1021	! look for and use a file attribute
	1022	! called open_ocean_jstart to set the start
	1023	! value for the 2nd dimension (netcdf only)
[9367]	1024	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1025	!
[679]	1026	IF( kiomid > 0 ) THEN
	1027	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r2d=pvar, &
[5118]	1028	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1029	& lrowattr=lrowattr, ldxios=ldxios)
[679]	1030	ENDIF
[550]	1031	END SUBROUTINE iom_g2d
[544]	1032
[9367]	1033	SUBROUTINE iom_g3d( kiomid, kdom, cdvar, pvar, ktime, kstart, kcount, lrowattr, ldxios )
[544]	1034	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1035	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1036	CHARACTER(len=*), INTENT(in ) :: cdvar ! Name of the variable
	1037	REAL(wp) , INTENT( out), DIMENSION(:,:,:) :: pvar ! read field
	1038	INTEGER , INTENT(in ) , OPTIONAL :: ktime ! record number
	1039	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kstart ! start axis position of the reading
	1040	INTEGER , INTENT(in ), DIMENSION(3) , OPTIONAL :: kcount ! number of points in each axis
[5118]	1041	LOGICAL , INTENT(in ) , OPTIONAL :: lrowattr ! logical flag telling iom_get to
	1042	! look for and use a file attribute
	1043	! called open_ocean_jstart to set the start
	1044	! value for the 2nd dimension (netcdf only)
[9367]	1045	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! read data using XIOS
[544]	1046	!
[679]	1047	IF( kiomid > 0 ) THEN
	1048	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_get_123d( kiomid, kdom , cdvar , pv_r3d=pvar, &
[5118]	1049	& ktime=ktime, kstart=kstart, kcount=kcount, &
[9367]	1050	& lrowattr=lrowattr, ldxios=ldxios )
[679]	1051	ENDIF
[550]	1052	END SUBROUTINE iom_g3d
[544]	1053	!!----------------------------------------------------------------------
	1054
	1055	SUBROUTINE iom_get_123d( kiomid, kdom , cdvar , &
[679]	1056	& pv_r1d, pv_r2d, pv_r3d, &
[5118]	1057	& ktime , kstart, kcount, &
[9367]	1058	& lrowattr, ldxios )
[544]	1059	!!-----------------------------------------------------------------------
	1060	!! * ROUTINE iom_get_123d *
	1061	!!
	1062	!! ** Purpose : read a 1D/2D/3D variable
	1063	!!
	1064	!! ** Method : read ONE record at each CALL
	1065	!!-----------------------------------------------------------------------
	1066	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1067	INTEGER , INTENT(in ) :: kdom ! Type of domain to be read
	1068	CHARACTER(len=*) , INTENT(in ) :: cdvar ! Name of the variable
	1069	REAL(wp), DIMENSION(:) , INTENT( out), OPTIONAL :: pv_r1d ! read field (1D case)
	1070	REAL(wp), DIMENSION(:,:) , INTENT( out), OPTIONAL :: pv_r2d ! read field (2D case)
	1071	REAL(wp), DIMENSION(:,:,:) , INTENT( out), OPTIONAL :: pv_r3d ! read field (3D case)
	1072	INTEGER , INTENT(in ), OPTIONAL :: ktime ! record number
	1073	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kstart ! start position of the reading in each axis
	1074	INTEGER , DIMENSION(:) , INTENT(in ), OPTIONAL :: kcount ! number of points to be read in each axis
[5118]	1075	LOGICAL , INTENT(in ), OPTIONAL :: lrowattr ! logical flag telling iom_get to
[9367]	1076	! look for and use a file attribute
	1077	! called open_ocean_jstart to set the start
	1078	! value for the 2nd dimension (netcdf only)
	1079	LOGICAL , INTENT(in ), OPTIONAL :: ldxios ! use XIOS to read restart
[544]	1080	!
[9367]	1081	LOGICAL :: llxios ! local definition for XIOS read
[1200]	1082	LOGICAL :: llnoov ! local definition to read overlap
[5118]	1083	LOGICAL :: luse_jattr ! local definition to read open_ocean_jstart file attribute
	1084	INTEGER :: jstartrow ! start point for 2nd dimension optionally set by file attribute
[544]	1085	INTEGER :: jl ! loop on number of dimension
	1086	INTEGER :: idom ! type of domain
	1087	INTEGER :: idvar ! id of the variable
	1088	INTEGER :: inbdim ! number of dimensions of the variable
	1089	INTEGER :: idmspc ! number of spatial dimensions
	1090	INTEGER :: itime ! record number
	1091	INTEGER :: istop ! temporary value of nstop
[679]	1092	INTEGER :: ix1, ix2, iy1, iy2 ! subdomain indexes
	1093	INTEGER :: ji, jj ! loop counters
[5118]	1094	INTEGER :: irankpv !
[679]	1095	INTEGER :: ind1, ind2 ! substring index
[544]	1096	INTEGER, DIMENSION(jpmax_dims) :: istart ! starting point to read for each axis
	1097	INTEGER, DIMENSION(jpmax_dims) :: icnt ! number of value to read along each axis
	1098	INTEGER, DIMENSION(jpmax_dims) :: idimsz ! size of the dimensions of the variable
[679]	1099	INTEGER, DIMENSION(jpmax_dims) :: ishape ! size of the dimensions of the variable
[544]	1100	REAL(wp) :: zscf, zofs ! sacle_factor and add_offset
	1101	INTEGER :: itmp ! temporary integer
[4148]	1102	CHARACTER(LEN=256) :: clinfo ! info character
	1103	CHARACTER(LEN=256) :: clname ! file name
[679]	1104	CHARACTER(LEN=1) :: clrankpv, cldmspc !
[6140]	1105	LOGICAL :: ll_depth_spec ! T => if kstart, kcount present then only use values for 3rd spatial dimension.
[9019]	1106	INTEGER :: inlev ! number of levels for 3D data
[9367]	1107	REAL(wp) :: gma, gmi
[544]	1108	!---------------------------------------------------------------------
	1109	!
[9019]	1110	inlev = -1
	1111	IF( PRESENT(pv_r3d) ) inlev = SIZE(pv_r3d, 3)
[9367]	1112	!
	1113	llxios = .FALSE.
	1114	if(PRESENT(ldxios)) llxios = ldxios
	1115	idvar = iom_varid( kiomid, cdvar )
[544]	1116	idom = kdom
[9367]	1117	!
	1118	IF(.NOT.llxios) THEN
	1119	clname = iom_file(kiomid)%name ! esier to read
	1120	clinfo = ' iom_get_123d, file: '//trim(clname)//', var: '//trim(cdvar)
	1121	! local definition of the domain ?
	1122	! do we read the overlap
	1123	! ugly patch SM+JMM+RB to overwrite global definition in some cases
	1124	llnoov = (jpni * jpnj ) == jpnij .AND. .NOT. lk_agrif
	1125	! check kcount and kstart optionals parameters...
	1126	IF( PRESENT(kcount) .AND. (.NOT. PRESENT(kstart)) ) CALL ctl_stop(trim(clinfo), 'kcount present needs kstart present')
	1127	IF( PRESENT(kstart) .AND. (.NOT. PRESENT(kcount)) ) CALL ctl_stop(trim(clinfo), 'kstart present needs kcount present')
	1128	IF( PRESENT(kstart) .AND. idom /= jpdom_unknown .AND. idom /= jpdom_autoglo_xy ) &
	1129	& CALL ctl_stop(trim(clinfo), 'kstart present needs kdom = jpdom_unknown or kdom = jpdom_autoglo_xy')
[544]	1130
[9367]	1131	luse_jattr = .false.
	1132	IF( PRESENT(lrowattr) ) THEN
	1133	IF( lrowattr .AND. idom /= jpdom_data ) CALL ctl_stop(trim(clinfo), 'lrowattr present and true needs kdom = jpdom_data')
	1134	IF( lrowattr .AND. idom == jpdom_data ) luse_jattr = .true.
[6140]	1135	ENDIF
[679]	1136
[9367]	1137	! Search for the variable in the data base (eventually actualize data)
	1138	istop = nstop
[544]	1139	!
[9367]	1140	IF( idvar > 0 ) THEN
	1141	! to write iom_file(kiomid)%dimsz in a shorter way !
	1142	idimsz(:) = iom_file(kiomid)%dimsz(:, idvar)
	1143	inbdim = iom_file(kiomid)%ndims(idvar) ! number of dimensions in the file
	1144	idmspc = inbdim ! number of spatial dimensions in the file
	1145	IF( iom_file(kiomid)%luld(idvar) ) idmspc = inbdim - 1
	1146	IF( idmspc > 3 ) CALL ctl_stop(trim(clinfo), 'the file has more than 3 spatial dimensions this case is not coded...')
	1147	!
	1148	! update idom definition...
	1149	! Identify the domain in case of jpdom_auto(glo/dta) definition
	1150	IF( idom == jpdom_autoglo_xy ) THEN
	1151	ll_depth_spec = .TRUE.
	1152	idom = jpdom_autoglo
	1153	ELSE
	1154	ll_depth_spec = .FALSE.
	1155	ENDIF
	1156	IF( idom == jpdom_autoglo .OR. idom == jpdom_autodta ) THEN
	1157	IF( idom == jpdom_autoglo ) THEN ; idom = jpdom_global
	1158	ELSE ; idom = jpdom_data
[544]	1159	ENDIF
[9367]	1160	ind1 = INDEX( clname, '_', back = .TRUE. ) + 1
	1161	ind2 = INDEX( clname, '.', back = .TRUE. ) - 1
	1162	IF( ind2 > ind1 ) THEN ; IF( VERIFY( clname(ind1:ind2), '0123456789' ) == 0 ) idom = jpdom_local ; ENDIF
	1163	ENDIF
	1164	! Identify the domain in case of jpdom_local definition
	1165	IF( idom == jpdom_local ) THEN
	1166	IF( idimsz(1) == jpi .AND. idimsz(2) == jpj ) THEN ; idom = jpdom_local_full
	1167	ELSEIF( idimsz(1) == nlci .AND. idimsz(2) == nlcj ) THEN ; idom = jpdom_local_noextra
	1168	ELSEIF( idimsz(1) == (nlei - nldi + 1) .AND. idimsz(2) == (nlej - nldj + 1) ) THEN ; idom = jpdom_local_noovlap
	1169	ELSE ; CALL ctl_stop( trim(clinfo), 'impossible to identify the local domain' )
	1170	ENDIF
	1171	ENDIF
	1172	!
	1173	! check the consistency between input array and data rank in the file
	1174	!
	1175	! initializations
	1176	itime = 1
	1177	IF( PRESENT(ktime) ) itime = ktime
	1178	!
	1179	irankpv = 1 * COUNT( (/PRESENT(pv_r1d)/) ) + 2 * COUNT( (/PRESENT(pv_r2d)/) ) + 3 * COUNT( (/PRESENT(pv_r3d)/) )
	1180	WRITE(clrankpv, fmt='(i1)') irankpv
	1181	WRITE(cldmspc , fmt='(i1)') idmspc
	1182	!
[12377]	1183	!!GS: we consider 2D data as 3D data with vertical dim size = 1
	1184	!IF( idmspc < irankpv ) THEN
	1185	! CALL ctl_stop( TRIM(clinfo), 'The file has only '//cldmspc//' spatial dimension', &
	1186	! & 'it is impossible to read a '//clrankpv//'D array from this file...' )
	1187	!ELSEIF( idmspc == irankpv ) THEN
	1188	IF( idmspc == irankpv ) THEN
[9367]	1189	IF( PRESENT(pv_r1d) .AND. idom /= jpdom_unknown ) &
	1190	& CALL ctl_stop( TRIM(clinfo), 'case not coded...You must use jpdom_unknown' )
	1191	ELSEIF( idmspc > irankpv ) THEN
	1192	IF( PRESENT(pv_r2d) .AND. itime == 1 .AND. idimsz(3) == 1 .AND. idmspc == 3 ) THEN
	1193	CALL ctl_warn( trim(clinfo), '2D array but 3 spatial dimensions for the data...' , &
	1194	& 'As the size of the z dimension is 1 and as we try to read the first record, ', &
	1195	& 'we accept this case, even if there is a possible mix-up between z and time dimension' )
	1196	idmspc = idmspc - 1
	1197	ELSE
	1198	CALL ctl_stop( TRIM(clinfo), 'To keep iom lisibility, when reading a '//clrankpv//'D array,' , &
	1199	& 'we do not accept data with '//cldmspc//' spatial dimensions', &
	1200	& 'Use ncwa -a to suppress the unnecessary dimensions' )
	1201	ENDIF
	1202	ENDIF
	1203	!
	1204	! definition of istart and icnt
	1205	!
	1206	icnt (:) = 1
	1207	istart(:) = 1
	1208	istart(idmspc+1) = itime
	1209
	1210	IF( PRESENT(kstart) .AND. .NOT. ll_depth_spec ) THEN
	1211	istart(1:idmspc) = kstart(1:idmspc)
	1212	icnt (1:idmspc) = kcount(1:idmspc)
	1213	ELSE
	1214	IF(idom == jpdom_unknown ) THEN
	1215	icnt(1:idmspc) = idimsz(1:idmspc)
	1216	ELSE
	1217	IF( .NOT. PRESENT(pv_r1d) ) THEN ! not a 1D array
	1218	IF( idom == jpdom_data ) THEN
	1219	jstartrow = 1
	1220	IF( luse_jattr ) THEN
	1221	CALL iom_getatt(kiomid, 'open_ocean_jstart', jstartrow ) ! -999 is returned if the attribute is not found
	1222	jstartrow = MAX(1,jstartrow)
	1223	ENDIF
	1224	istart(1:2) = (/ mig(1), mjg(1) + jstartrow - 1 /) ! icnt(1:2) done below
	1225	ELSEIF( idom == jpdom_global ) THEN ; istart(1:2) = (/ nimpp , njmpp /) ! icnt(1:2) done below
[5118]	1226	ENDIF
[9367]	1227	! we do not read the overlap -> we start to read at nldi, nldj
[679]	1228	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1229	! IF( idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[9367]	1230	IF( llnoov .AND. idom /= jpdom_local_noovlap ) istart(1:2) = istart(1:2) + (/ nldi - 1, nldj - 1 /)
[679]	1231	! we do not read the overlap and the extra-halos -> from nldi to nlei and from nldj to nlej
	1232	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1233	! icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
[9367]	1234	IF( llnoov ) THEN ; icnt(1:2) = (/ nlei - nldi + 1, nlej - nldj + 1 /)
	1235	ELSE ; icnt(1:2) = (/ nlci , nlcj /)
[544]	1236	ENDIF
[9367]	1237	IF( PRESENT(pv_r3d) ) THEN
	1238	IF( idom == jpdom_data ) THEN ; icnt(3) = inlev
	1239	ELSEIF( ll_depth_spec .AND. PRESENT(kstart) ) THEN ; istart(3) = kstart(3) ; icnt(3) = kcount(3)
	1240	ELSE ; icnt(3) = inlev
	1241	ENDIF
	1242	ENDIF
[544]	1243	ENDIF
	1244	ENDIF
[679]	1245	ENDIF
[544]	1246
[9367]	1247	! check that istart and icnt can be used with this file
	1248	!-
	1249	DO jl = 1, jpmax_dims
	1250	itmp = istart(jl)+icnt(jl)-1
	1251	IF( itmp > idimsz(jl) .AND. idimsz(jl) /= 0 ) THEN
	1252	WRITE( ctmp1, FMT="('(istart(', i1, ') + icnt(', i1, ') - 1) = ', i5)" ) jl, jl, itmp
	1253	WRITE( ctmp2, FMT="(' is larger than idimsz(', i1,') = ', i5)" ) jl, idimsz(jl)
	1254	CALL ctl_stop( trim(clinfo), 'start and count too big regarding to the size of the data, ', ctmp1, ctmp2 )
	1255	ENDIF
	1256	END DO
[544]	1257
[9367]	1258	! check that icnt matches the input array
	1259	!-
	1260	IF( idom == jpdom_unknown ) THEN
	1261	IF( irankpv == 1 ) ishape(1:1) = SHAPE(pv_r1d)
	1262	IF( irankpv == 2 ) ishape(1:2) = SHAPE(pv_r2d)
	1263	IF( irankpv == 3 ) ishape(1:3) = SHAPE(pv_r3d)
	1264	ctmp1 = 'd'
	1265	ELSE
	1266	IF( irankpv == 2 ) THEN
[679]	1267	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1268	! ishape(1:2) = SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1 = 'd(nldi:nlei,nldj:nlej)'
[9367]	1269	IF( llnoov ) THEN ; ishape(1:2)=SHAPE(pv_r2d(nldi:nlei,nldj:nlej )) ; ctmp1='d(nldi:nlei,nldj:nlej)'
	1270	ELSE ; ishape(1:2)=SHAPE(pv_r2d(1 :nlci,1 :nlcj )) ; ctmp1='d(1:nlci,1:nlcj)'
	1271	ENDIF
[544]	1272	ENDIF
[9367]	1273	IF( irankpv == 3 ) THEN
[679]	1274	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1275	! ishape(1:3) = SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1 = 'd(nldi:nlei,nldj:nlej,:)'
[9367]	1276	IF( llnoov ) THEN ; ishape(1:3)=SHAPE(pv_r3d(nldi:nlei,nldj:nlej,:)) ; ctmp1='d(nldi:nlei,nldj:nlej,:)'
	1277	ELSE ; ishape(1:3)=SHAPE(pv_r3d(1 :nlci,1 :nlcj,:)) ; ctmp1='d(1:nlci,1:nlcj,:)'
	1278	ENDIF
[544]	1279	ENDIF
[679]	1280	ENDIF
	1281
[9367]	1282	DO jl = 1, irankpv
	1283	WRITE( ctmp2, FMT="(', ', i1,'): ', i5,' /= icnt(', i1,'):', i5)" ) jl, ishape(jl), jl, icnt(jl)
	1284	IF( ishape(jl) /= icnt(jl) ) CALL ctl_stop( TRIM(clinfo), 'size(pv_r'//clrankpv//TRIM(ctmp1)//TRIM(ctmp2) )
	1285	END DO
[679]	1286
[9367]	1287	ENDIF
[544]	1288
[9367]	1289	! read the data
	1290	!-
	1291	IF( idvar > 0 .AND. istop == nstop ) THEN ! no additional errors until this point...
	1292	!
[679]	1293	! find the right index of the array to be read
	1294	! JMM + SM: ugly patch before getting the new version of lib_mpp)
	1295	! IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1296	! ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1297	! ENDIF
[9367]	1298	IF( llnoov ) THEN
	1299	IF( idom /= jpdom_unknown ) THEN ; ix1 = nldi ; ix2 = nlei ; iy1 = nldj ; iy2 = nlej
	1300	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1301	ENDIF
	1302	ELSE
	1303	IF( idom /= jpdom_unknown ) THEN ; ix1 = 1 ; ix2 = nlci ; iy1 = 1 ; iy2 = nlcj
	1304	ELSE ; ix1 = 1 ; ix2 = icnt(1) ; iy1 = 1 ; iy2 = icnt(2)
	1305	ENDIF
[679]	1306	ENDIF
	1307
[10425]	1308	CALL iom_nf90_get( kiomid, idvar, inbdim, istart, icnt, ix1, ix2, iy1, iy2, pv_r1d, pv_r2d, pv_r3d )
[679]	1309
[9367]	1310	IF( istop == nstop ) THEN ! no additional errors until this point...
	1311	IF(lwp) WRITE(numout,"(10x,' read ',a,' (rec: ',i6,') in ',a,' ok')") TRIM(cdvar), itime, TRIM(iom_file(kiomid)%name)
	1312
	1313	!--- overlap areas and extra hallows (mpp)
	1314	IF( PRESENT(pv_r2d) .AND. idom /= jpdom_unknown ) THEN
[11536]	1315	CALL lbc_lnk( 'iom', pv_r2d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1316	ELSEIF( PRESENT(pv_r3d) .AND. idom /= jpdom_unknown ) THEN
	1317	! this if could be simplified with the new lbc_lnk that works with any size of the 3rd dimension
	1318	IF( icnt(3) == inlev ) THEN
[11536]	1319	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing )
[9367]	1320	ELSE ! put some arbitrary value (a call to lbc_lnk will be done later...)
	1321	DO jj = nlcj+1, jpj ; pv_r3d(1:nlci, jj, :) = pv_r3d(1:nlci, nlej, :) ; END DO
	1322	DO ji = nlci+1, jpi ; pv_r3d(ji , : , :) = pv_r3d(nlei , : , :) ; END DO
	1323	ENDIF
[679]	1324	ENDIF
[9367]	1325	!
	1326	ELSE
	1327	! return if istop == nstop is false
	1328	RETURN
[679]	1329	ENDIF
[9367]	1330	ELSE
	1331	! return if statment idvar > 0 .AND. istop == nstop is false
	1332	RETURN
	1333	ENDIF
	1334	!
	1335	ELSE ! read using XIOS. Only if KEY_IOMPUT is defined
	1336	#if defined key_iomput
	1337	!would be good to be able to check which context is active and swap only if current is not restart
	1338	CALL iom_swap( TRIM(crxios_context) )
	1339	IF( PRESENT(pv_r3d) ) THEN
[9535]	1340	pv_r3d(:, :, :) = 0.
[9367]	1341	if(lwp) write(numout,*) 'XIOS RST READ (3D): ',trim(cdvar)
	1342	CALL xios_recv_field( trim(cdvar), pv_r3d)
	1343	IF(idom /= jpdom_unknown ) then
[11536]	1344	CALL lbc_lnk( 'iom', pv_r3d,'Z', -999., kfillmode = jpfillnothing)
[679]	1345	ENDIF
[9367]	1346	ELSEIF( PRESENT(pv_r2d) ) THEN
[9535]	1347	pv_r2d(:, :) = 0.
[9367]	1348	if(lwp) write(numout,*) 'XIOS RST READ (2D): ', trim(cdvar)
	1349	CALL xios_recv_field( trim(cdvar), pv_r2d)
	1350	IF(idom /= jpdom_unknown ) THEN
[11536]	1351	CALL lbc_lnk('iom', pv_r2d,'Z',-999., kfillmode = jpfillnothing)
[9367]	1352	ENDIF
	1353	ELSEIF( PRESENT(pv_r1d) ) THEN
[9535]	1354	pv_r1d(:) = 0.
[9367]	1355	if(lwp) write(numout,*) 'XIOS RST READ (1D): ', trim(cdvar)
	1356	CALL xios_recv_field( trim(cdvar), pv_r1d)
[544]	1357	ENDIF
[9367]	1358	CALL iom_swap( TRIM(cxios_context) )
	1359	#else
	1360	istop = istop + 1
	1361	clinfo = 'Can not use XIOS in iom_get_123d, file: '//trim(clname)//', var:'//trim(cdvar)
	1362	#endif
[544]	1363	ENDIF
[9367]	1364	!some final adjustments
	1365	! C1D case : always call lbc_lnk to replicate the central value over the whole 3X3 domain
[10425]	1366	IF( lk_c1d .AND. PRESENT(pv_r2d) ) CALL lbc_lnk( 'iom', pv_r2d,'Z',1. )
	1367	IF( lk_c1d .AND. PRESENT(pv_r3d) ) CALL lbc_lnk( 'iom', pv_r3d,'Z',1. )
[9367]	1368
	1369	!--- Apply scale_factor and offset
	1370	zscf = iom_file(kiomid)%scf(idvar) ! scale factor
	1371	zofs = iom_file(kiomid)%ofs(idvar) ! offset
	1372	IF( PRESENT(pv_r1d) ) THEN
	1373	IF( zscf /= 1. ) pv_r1d(:) = pv_r1d(:) * zscf
	1374	IF( zofs /= 0. ) pv_r1d(:) = pv_r1d(:) + zofs
	1375	ELSEIF( PRESENT(pv_r2d) ) THEN
	1376	IF( zscf /= 1.) pv_r2d(:,:) = pv_r2d(:,:) * zscf
	1377	IF( zofs /= 0.) pv_r2d(:,:) = pv_r2d(:,:) + zofs
	1378	ELSEIF( PRESENT(pv_r3d) ) THEN
	1379	IF( zscf /= 1.) pv_r3d(:,:,:) = pv_r3d(:,:,:) * zscf
	1380	IF( zofs /= 0.) pv_r3d(:,:,:) = pv_r3d(:,:,:) + zofs
	1381	ENDIF
[544]	1382	!
	1383	END SUBROUTINE iom_get_123d
	1384
[12276]	1385	SUBROUTINE iom_get_var( cdname, z2d)
	1386	CHARACTER(LEN=*), INTENT(in ) :: cdname
	1387	REAL(wp), DIMENSION(jpi,jpj) :: z2d
	1388	#if defined key_iomput
	1389	IF( xios_field_is_active( cdname, at_current_timestep_arg = .TRUE. ) ) THEN
	1390	z2d(:,:) = 0._wp
	1391	CALL xios_recv_field( cdname, z2d)
	1392	ENDIF
	1393	#else
	1394	IF( .FALSE. ) WRITE(numout,*) cdname, z2d ! useless test to avoid compilation warnings
	1395	#endif
	1396	END SUBROUTINE iom_get_var
[544]	1397
[12276]	1398
[10522]	1399	FUNCTION iom_getszuld ( kiomid )
	1400	!!-----------------------------------------------------------------------
	1401	!! * FUNCTION iom_getszuld *
[544]	1402	!!
[10522]	1403	!! ** Purpose : get the size of the unlimited dimension in a file
	1404	!! (return -1 if not found)
	1405	!!-----------------------------------------------------------------------
	1406	INTEGER, INTENT(in ) :: kiomid ! file Identifier
[544]	1407	!
[10522]	1408	INTEGER :: iom_getszuld
	1409	!!-----------------------------------------------------------------------
	1410	iom_getszuld = -1
[679]	1411	IF( kiomid > 0 ) THEN
[10523]	1412	IF( iom_file(kiomid)%iduld > 0 ) iom_getszuld = iom_file(kiomid)%lenuld
[544]	1413	ENDIF
[10522]	1414	END FUNCTION iom_getszuld
	1415
[544]	1416
	1417	!!----------------------------------------------------------------------
[10425]	1418	!! INTERFACE iom_chkatt
[2528]	1419	!!----------------------------------------------------------------------
[10425]	1420	SUBROUTINE iom_chkatt( kiomid, cdatt, llok, ksize, cdvar )
[2528]	1421	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1422	CHARACTER(len=*), INTENT(in ) :: cdatt ! Name of the attribute
[10425]	1423	LOGICAL , INTENT( out) :: llok ! Error code
	1424	INTEGER , INTENT( out), OPTIONAL :: ksize ! Size of the attribute array
[7646]	1425	CHARACTER(len=*), INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[2528]	1426	!
	1427	IF( kiomid > 0 ) THEN
[10425]	1428	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_chkatt( kiomid, cdatt, llok, ksize=ksize, cdvar=cdvar )
[2528]	1429	ENDIF
[10425]	1430	!
	1431	END SUBROUTINE iom_chkatt
	1432
	1433	!!----------------------------------------------------------------------
	1434	!! INTERFACE iom_getatt
	1435	!!----------------------------------------------------------------------
	1436	SUBROUTINE iom_g0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1437	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1438	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1439	INTEGER , INTENT( out) :: katt0d ! read field
	1440	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1441	!
	1442	IF( kiomid > 0 ) THEN
	1443	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
	1444	ENDIF
[7646]	1445	END SUBROUTINE iom_g0d_iatt
[2528]	1446
[10425]	1447	SUBROUTINE iom_g1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1448	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1449	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1450	INTEGER, DIMENSION(:) , INTENT( out) :: katt1d ! read field
	1451	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1452	!
	1453	IF( kiomid > 0 ) THEN
[10425]	1454	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1455	ENDIF
[10425]	1456	END SUBROUTINE iom_g1d_iatt
	1457
	1458	SUBROUTINE iom_g0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1459	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1460	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1461	REAL(wp) , INTENT( out) :: patt0d ! read field
	1462	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1463	!
	1464	IF( kiomid > 0 ) THEN
	1465	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1466	ENDIF
[7646]	1467	END SUBROUTINE iom_g0d_ratt
[2528]	1468
[10425]	1469	SUBROUTINE iom_g1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1470	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1471	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1472	REAL(wp), DIMENSION(:), INTENT( out) :: patt1d ! read field
	1473	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1474	!
	1475	IF( kiomid > 0 ) THEN
[10425]	1476	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1477	ENDIF
[10425]	1478	END SUBROUTINE iom_g1d_ratt
	1479
	1480	SUBROUTINE iom_g0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1481	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1482	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1483	CHARACTER(len=*) , INTENT( out) :: cdatt0d ! read field
	1484	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1485	!
	1486	IF( kiomid > 0 ) THEN
	1487	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_getatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1488	ENDIF
[7646]	1489	END SUBROUTINE iom_g0d_catt
	1490
[10425]	1491
[2528]	1492	!!----------------------------------------------------------------------
[7646]	1493	!! INTERFACE iom_putatt
	1494	!!----------------------------------------------------------------------
[10425]	1495	SUBROUTINE iom_p0d_iatt( kiomid, cdatt, katt0d, cdvar )
	1496	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1497	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1498	INTEGER , INTENT(in ) :: katt0d ! written field
	1499	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1500	!
	1501	IF( kiomid > 0 ) THEN
[10425]	1502	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt0d = katt0d, cdvar=cdvar )
[7646]	1503	ENDIF
	1504	END SUBROUTINE iom_p0d_iatt
	1505
[10425]	1506	SUBROUTINE iom_p1d_iatt( kiomid, cdatt, katt1d, cdvar )
	1507	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1508	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1509	INTEGER, DIMENSION(:) , INTENT(in ) :: katt1d ! written field
	1510	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1511	!
	1512	IF( kiomid > 0 ) THEN
[10425]	1513	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, katt1d = katt1d, cdvar=cdvar )
[7646]	1514	ENDIF
[10425]	1515	END SUBROUTINE iom_p1d_iatt
	1516
	1517	SUBROUTINE iom_p0d_ratt( kiomid, cdatt, patt0d, cdvar )
	1518	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1519	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1520	REAL(wp) , INTENT(in ) :: patt0d ! written field
	1521	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1522	!
	1523	IF( kiomid > 0 ) THEN
	1524	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt0d = patt0d, cdvar=cdvar )
	1525	ENDIF
[7646]	1526	END SUBROUTINE iom_p0d_ratt
	1527
[10425]	1528	SUBROUTINE iom_p1d_ratt( kiomid, cdatt, patt1d, cdvar )
	1529	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1530	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1531	REAL(wp), DIMENSION(:), INTENT(in ) :: patt1d ! written field
	1532	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
[7646]	1533	!
	1534	IF( kiomid > 0 ) THEN
[10425]	1535	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, patt1d = patt1d, cdvar=cdvar )
[7646]	1536	ENDIF
[10425]	1537	END SUBROUTINE iom_p1d_ratt
	1538
	1539	SUBROUTINE iom_p0d_catt( kiomid, cdatt, cdatt0d, cdvar )
	1540	INTEGER , INTENT(in ) :: kiomid ! Identifier of the file
	1541	CHARACTER(len=*) , INTENT(in ) :: cdatt ! Name of the attribute
	1542	CHARACTER(len=*) , INTENT(in ) :: cdatt0d ! written field
	1543	CHARACTER(len=*) , INTENT(in ), OPTIONAL :: cdvar ! Name of the variable
	1544	!
	1545	IF( kiomid > 0 ) THEN
	1546	IF( iom_file(kiomid)%nfid > 0 ) CALL iom_nf90_putatt( kiomid, cdatt, cdatt0d = cdatt0d, cdvar=cdvar )
	1547	ENDIF
[7646]	1548	END SUBROUTINE iom_p0d_catt
	1549
[10425]	1550
[7646]	1551	!!----------------------------------------------------------------------
[544]	1552	!! INTERFACE iom_rstput
	1553	!!----------------------------------------------------------------------
[9367]	1554	SUBROUTINE iom_rp0d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1555	INTEGER , INTENT(in) :: kt ! ocean time-step
	1556	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1557	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1558	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[556]	1559	REAL(wp) , INTENT(in) :: pvar ! written field
[544]	1560	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1561	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1562	LOGICAL :: llx ! local xios write flag
[544]	1563	INTEGER :: ivid ! variable id
[9367]	1564
	1565	llx = .FALSE.
	1566	IF(PRESENT(ldxios)) llx = ldxios
	1567	IF( llx ) THEN
	1568	#ifdef key_iomput
	1569	IF( kt == kwrite ) THEN
	1570	IF(lwp) write(numout,*) 'RESTART: write (XIOS 0D) ',trim(cdvar)
	1571	CALL xios_send_field(trim(cdvar), pvar)
	1572	ENDIF
	1573	#endif
	1574	ELSE
	1575	IF( kiomid > 0 ) THEN
	1576	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1577	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1578	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r0d = pvar )
[9367]	1579	ENDIF
[679]	1580	ENDIF
	1581	ENDIF
[550]	1582	END SUBROUTINE iom_rp0d
[544]	1583
[9367]	1584	SUBROUTINE iom_rp1d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1585	INTEGER , INTENT(in) :: kt ! ocean time-step
	1586	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1587	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1588	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1589	REAL(wp) , INTENT(in), DIMENSION( :) :: pvar ! written field
[544]	1590	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1591	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1592	LOGICAL :: llx ! local xios write flag
[544]	1593	INTEGER :: ivid ! variable id
[9367]	1594
	1595	llx = .FALSE.
	1596	IF(PRESENT(ldxios)) llx = ldxios
	1597	IF( llx ) THEN
	1598	#ifdef key_iomput
	1599	IF( kt == kwrite ) THEN
	1600	IF(lwp) write(numout,*) 'RESTART: write (XIOS 1D) ',trim(cdvar)
	1601	CALL xios_send_field(trim(cdvar), pvar)
	1602	ENDIF
	1603	#endif
	1604	ELSE
	1605	IF( kiomid > 0 ) THEN
	1606	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1607	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1608	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r1d = pvar )
[9367]	1609	ENDIF
[679]	1610	ENDIF
	1611	ENDIF
[550]	1612	END SUBROUTINE iom_rp1d
[544]	1613
[9367]	1614	SUBROUTINE iom_rp2d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1615	INTEGER , INTENT(in) :: kt ! ocean time-step
	1616	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1617	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1618	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1619	REAL(wp) , INTENT(in), DIMENSION(:, : ) :: pvar ! written field
[544]	1620	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1621	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1622	LOGICAL :: llx
[544]	1623	INTEGER :: ivid ! variable id
[9367]	1624
	1625	llx = .FALSE.
	1626	IF(PRESENT(ldxios)) llx = ldxios
	1627	IF( llx ) THEN
	1628	#ifdef key_iomput
	1629	IF( kt == kwrite ) THEN
	1630	IF(lwp) write(numout,*) 'RESTART: write (XIOS 2D) ',trim(cdvar)
	1631	CALL xios_send_field(trim(cdvar), pvar)
	1632	ENDIF
	1633	#endif
	1634	ELSE
	1635	IF( kiomid > 0 ) THEN
	1636	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1637	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1638	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r2d = pvar )
[9367]	1639	ENDIF
[679]	1640	ENDIF
	1641	ENDIF
[550]	1642	END SUBROUTINE iom_rp2d
[544]	1643
[9367]	1644	SUBROUTINE iom_rp3d( kt, kwrite, kiomid, cdvar, pvar, ktype, ldxios )
[544]	1645	INTEGER , INTENT(in) :: kt ! ocean time-step
	1646	INTEGER , INTENT(in) :: kwrite ! writing time-step
	1647	INTEGER , INTENT(in) :: kiomid ! Identifier of the file
	1648	CHARACTER(len=*), INTENT(in) :: cdvar ! time axis name
[2715]	1649	REAL(wp) , INTENT(in), DIMENSION(:,:,:) :: pvar ! written field
[544]	1650	INTEGER , INTENT(in), OPTIONAL :: ktype ! variable external type
[9367]	1651	LOGICAL, OPTIONAL :: ldxios ! xios write flag
	1652	LOGICAL :: llx ! local xios write flag
[544]	1653	INTEGER :: ivid ! variable id
[9367]	1654
	1655	llx = .FALSE.
	1656	IF(PRESENT(ldxios)) llx = ldxios
	1657	IF( llx ) THEN
	1658	#ifdef key_iomput
	1659	IF( kt == kwrite ) THEN
	1660	IF(lwp) write(numout,*) 'RESTART: write (XIOS 3D) ',trim(cdvar)
	1661	CALL xios_send_field(trim(cdvar), pvar)
	1662	ENDIF
	1663	#endif
	1664	ELSE
	1665	IF( kiomid > 0 ) THEN
	1666	IF( iom_file(kiomid)%nfid > 0 ) THEN
	1667	ivid = iom_varid( kiomid, cdvar, ldstop = .FALSE. )
[10425]	1668	CALL iom_nf90_rstput( kt, kwrite, kiomid, cdvar, ivid, ktype, pv_r3d = pvar )
[9367]	1669	ENDIF
[679]	1670	ENDIF
	1671	ENDIF
[550]	1672	END SUBROUTINE iom_rp3d
[1359]	1673
	1674
[10425]	1675	SUBROUTINE iom_delay_rst( cdaction, cdcpnt, kncid )
	1676	!!---------------------------------------------------------------------
	1677	!! Routine iom_delay_rst: used read/write restart related to mpp_delay
	1678	!!
	1679	!!---------------------------------------------------------------------
	1680	CHARACTER(len=*), INTENT(in ) :: cdaction !
	1681	CHARACTER(len=*), INTENT(in ) :: cdcpnt
	1682	INTEGER , INTENT(in ) :: kncid
	1683	!
	1684	INTEGER :: ji
	1685	INTEGER :: indim
	1686	LOGICAL :: llattexist
	1687	REAL(wp), ALLOCATABLE, DIMENSION(:) :: zreal1d
	1688	!!---------------------------------------------------------------------
	1689	!
	1690	! ===================================
	1691	IF( TRIM(cdaction) == 'READ' ) THEN ! read restart related to mpp_delay !
	1692	! ===================================
	1693	DO ji = 1, nbdelay
	1694	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1695	CALL iom_chkatt( kncid, 'DELAY_'//c_delaylist(ji), llattexist, indim )
	1696	IF( llattexist ) THEN
	1697	ALLOCATE( todelay(ji)%z1d(indim) )
	1698	CALL iom_getatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1699	ndelayid(ji) = 0 ! set to 0 to specify that the value was read in the restart
	1700	ENDIF
	1701	ENDIF
	1702	END DO
	1703	! ====================================
	1704	ELSE ! write restart related to mpp_delay !
	1705	! ====================================
	1706	DO ji = 1, nbdelay ! save only ocean delayed global communication variables
	1707	IF ( c_delaycpnt(ji) == cdcpnt ) THEN
	1708	IF( ASSOCIATED(todelay(ji)%z1d) ) THEN
	1709	CALL mpp_delay_rcv(ji) ! make sure %z1d is received
	1710	CALL iom_putatt( kncid, 'DELAY_'//c_delaylist(ji), todelay(ji)%z1d(:) )
	1711	ENDIF
	1712	ENDIF
	1713	END DO
	1714	!
	1715	ENDIF
	1716
	1717	END SUBROUTINE iom_delay_rst
	1718
	1719
	1720
[544]	1721	!!----------------------------------------------------------------------
[1457]	1722	!! INTERFACE iom_put
[1359]	1723	!!----------------------------------------------------------------------
[1738]	1724	SUBROUTINE iom_p0d( cdname, pfield0d )
	1725	CHARACTER(LEN=*), INTENT(in) :: cdname
	1726	REAL(wp) , INTENT(in) :: pfield0d
[11536]	1727	!! REAL(wp) , DIMENSION(jpi,jpj) :: zz ! masson
[1738]	1728	#if defined key_iomput
[11536]	1729	!!clem zz(:,:)=pfield0d
	1730	!!clem CALL xios_send_field(cdname, zz)
	1731	CALL xios_send_field(cdname, (/pfield0d/))
[1738]	1732	#else
	1733	IF( .FALSE. ) WRITE(numout,*) cdname, pfield0d ! useless test to avoid compilation warnings
	1734	#endif
	1735	END SUBROUTINE iom_p0d
	1736
[3294]	1737	SUBROUTINE iom_p1d( cdname, pfield1d )
	1738	CHARACTER(LEN=*) , INTENT(in) :: cdname
	1739	REAL(wp), DIMENSION(:), INTENT(in) :: pfield1d
	1740	#if defined key_iomput
[3695]	1741	CALL xios_send_field( cdname, RESHAPE( (/pfield1d/), (/1,1,SIZE(pfield1d)/) ) )
[3294]	1742	#else
	1743	IF( .FALSE. ) WRITE(numout,*) cdname, pfield1d ! useless test to avoid compilation warnings
	1744	#endif
	1745	END SUBROUTINE iom_p1d
	1746
[1359]	1747	SUBROUTINE iom_p2d( cdname, pfield2d )
	1748	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1749	REAL(wp), DIMENSION(:,:), INTENT(in) :: pfield2d
[1412]	1750	#if defined key_iomput
[3695]	1751	CALL xios_send_field(cdname, pfield2d)
[1520]	1752	#else
	1753	IF( .FALSE. ) WRITE(numout,*) cdname, pfield2d ! useless test to avoid compilation warnings
[1359]	1754	#endif
	1755	END SUBROUTINE iom_p2d
[544]	1756
[1359]	1757	SUBROUTINE iom_p3d( cdname, pfield3d )
	1758	CHARACTER(LEN=*) , INTENT(in) :: cdname
[2715]	1759	REAL(wp), DIMENSION(:,:,:), INTENT(in) :: pfield3d
[1412]	1760	#if defined key_iomput
[9019]	1761	CALL xios_send_field( cdname, pfield3d )
[1520]	1762	#else
	1763	IF( .FALSE. ) WRITE(numout,*) cdname, pfield3d ! useless test to avoid compilation warnings
[1359]	1764	#endif
	1765	END SUBROUTINE iom_p3d
[544]	1766
[12276]	1767	SUBROUTINE iom_p4d( cdname, pfield4d )
[12377]	1768	CHARACTER(LEN=*) , INTENT(in) :: cdname
[12276]	1769	REAL(wp), DIMENSION(:,:,:,:), INTENT(in) :: pfield4d
[1412]	1770	#if defined key_iomput
[12276]	1771	CALL xios_send_field(cdname, pfield4d)
	1772	#else
	1773	IF( .FALSE. ) WRITE(numout,*) cdname, pfield4d ! useless test to avoid compilation warnings
	1774	#endif
	1775	END SUBROUTINE iom_p4d
	1776
	1777
	1778	#if defined key_iomput
[9019]	1779	!!----------------------------------------------------------------------
[9802]	1780	!! 'key_iomput' XIOS interface
[9019]	1781	!!----------------------------------------------------------------------
[1359]	1782
[9930]	1783	SUBROUTINE iom_set_domain_attr( cdid, ni_glo, nj_glo, ibegin, jbegin, ni, nj, &
[5363]	1784	& data_dim, data_ibegin, data_ni, data_jbegin, data_nj, lonvalue, latvalue, mask, &
[5415]	1785	& nvertex, bounds_lon, bounds_lat, area )
[9019]	1786	!!----------------------------------------------------------------------
	1787	!!----------------------------------------------------------------------
	1788	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1789	INTEGER , OPTIONAL, INTENT(in) :: ni_glo, nj_glo, ibegin, jbegin, ni, nj
	1790	INTEGER , OPTIONAL, INTENT(in) :: data_dim, data_ibegin, data_ni, data_jbegin, data_nj
[9930]	1791	INTEGER , OPTIONAL, INTENT(in) :: nvertex
[9019]	1792	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: lonvalue, latvalue
	1793	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds_lon, bounds_lat, area
	1794	LOGICAL , DIMENSION(:) , OPTIONAL, INTENT(in) :: mask
	1795	!!----------------------------------------------------------------------
	1796	!
	1797	IF( xios_is_valid_domain (cdid) ) THEN
[4148]	1798	CALL xios_set_domain_attr ( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1799	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1800	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1801	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear')
[9367]	1802	ENDIF
[9019]	1803	IF( xios_is_valid_domaingroup(cdid) ) THEN
[4148]	1804	CALL xios_set_domaingroup_attr( cdid, ni_glo=ni_glo, nj_glo=nj_glo, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj, &
	1805	& data_dim=data_dim, data_ibegin=data_ibegin, data_ni=data_ni, data_jbegin=data_jbegin, data_nj=data_nj , &
[7646]	1806	& lonvalue_1D=lonvalue, latvalue_1D=latvalue, mask_1D=mask, nvertex=nvertex, bounds_lon_1D=bounds_lon, &
	1807	& bounds_lat_1D=bounds_lat, area=area, type='curvilinear' )
[3695]	1808	ENDIF
[9019]	1809	!
[4148]	1810	CALL xios_solve_inheritance()
[9019]	1811	!
[3695]	1812	END SUBROUTINE iom_set_domain_attr
	1813
	1814
[9019]	1815	SUBROUTINE iom_set_zoom_domain_attr( cdid, ibegin, jbegin, ni, nj )
	1816	!!----------------------------------------------------------------------
	1817	!!----------------------------------------------------------------------
[9930]	1818	CHARACTER(LEN=*), INTENT(in) :: cdid
	1819	INTEGER , INTENT(in) :: ibegin, jbegin, ni, nj
	1820	!
	1821	TYPE(xios_gridgroup) :: gridgroup_hdl
	1822	TYPE(xios_grid) :: grid_hdl
	1823	TYPE(xios_domain) :: domain_hdl
	1824	TYPE(xios_axis) :: axis_hdl
	1825	CHARACTER(LEN=64) :: cldomrefid ! domain_ref name
	1826	CHARACTER(len=1) :: cl1 ! last character of this name
[9019]	1827	!!----------------------------------------------------------------------
[9930]	1828	!
	1829	IF( xios_is_valid_zoom_domain(cdid) ) THEN
	1830	! define the zoom_domain attributs
	1831	CALL xios_set_zoom_domain_attr( cdid, ibegin=ibegin, jbegin=jbegin, ni=ni, nj=nj )
	1832	! define a new 2D grid with this new domain
	1833	CALL xios_get_handle("grid_definition", gridgroup_hdl )
	1834	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_2D' ) ! add a new 2D grid to grid_definition
	1835	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1836	! define a new 3D grid with this new domain
	1837	CALL xios_add_child(gridgroup_hdl, grid_hdl, TRIM(cdid)//'_3D' ) ! add a new 3D grid to grid_definition
	1838	CALL xios_add_child(grid_hdl, domain_hdl, TRIM(cdid) ) ! add its domain
	1839	! vertical axis
	1840	cl1 = cdid(LEN_TRIM(cdid):) ! last letter of cdid
	1841	cl1 = CHAR(ICHAR(cl1)+32) ! from upper to lower case
	1842	CALL xios_add_child(grid_hdl, axis_hdl, 'depth'//cl1) ! add its axis
	1843	ENDIF
	1844	!
[7646]	1845	END SUBROUTINE iom_set_zoom_domain_attr
	1846
	1847
[5415]	1848	SUBROUTINE iom_set_axis_attr( cdid, paxis, bounds )
[9019]	1849	!!----------------------------------------------------------------------
	1850	!!----------------------------------------------------------------------
[4148]	1851	CHARACTER(LEN=*) , INTENT(in) :: cdid
[5415]	1852	REAL(wp), DIMENSION(:) , OPTIONAL, INTENT(in) :: paxis
	1853	REAL(wp), DIMENSION(:,:), OPTIONAL, INTENT(in) :: bounds
[9019]	1854	!!----------------------------------------------------------------------
	1855	IF( PRESENT(paxis) ) THEN
	1856	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, n_glo=SIZE(paxis), value=paxis )
	1857	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, n_glo=SIZE(paxis), value=paxis )
[5415]	1858	ENDIF
[9019]	1859	IF( xios_is_valid_axis (cdid) ) CALL xios_set_axis_attr ( cdid, bounds=bounds )
	1860	IF( xios_is_valid_axisgroup(cdid) ) CALL xios_set_axisgroup_attr( cdid, bounds=bounds )
[4148]	1861	CALL xios_solve_inheritance()
[3737]	1862	END SUBROUTINE iom_set_axis_attr
	1863
	1864
[4148]	1865	SUBROUTINE iom_set_field_attr( cdid, freq_op, freq_offset )
[9019]	1866	!!----------------------------------------------------------------------
	1867	!!----------------------------------------------------------------------
	1868	CHARACTER(LEN=*) , INTENT(in) :: cdid
	1869	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_op
	1870	TYPE(xios_duration), OPTIONAL, INTENT(in) :: freq_offset
	1871	!!----------------------------------------------------------------------
	1872	IF( xios_is_valid_field (cdid) ) CALL xios_set_field_attr ( cdid, freq_op=freq_op, freq_offset=freq_offset )
	1873	IF( xios_is_valid_fieldgroup(cdid) ) CALL xios_set_fieldgroup_attr( cdid, freq_op=freq_op, freq_offset=freq_offset )
[4148]	1874	CALL xios_solve_inheritance()
[3695]	1875	END SUBROUTINE iom_set_field_attr
	1876
	1877
[4148]	1878	SUBROUTINE iom_set_file_attr( cdid, name, name_suffix )
[9019]	1879	!!----------------------------------------------------------------------
	1880	!!----------------------------------------------------------------------
[4148]	1881	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3695]	1882	CHARACTER(LEN=*),OPTIONAL , INTENT(in) :: name, name_suffix
[9019]	1883	!!----------------------------------------------------------------------
	1884	IF( xios_is_valid_file (cdid) ) CALL xios_set_file_attr ( cdid, name=name, name_suffix=name_suffix )
	1885	IF( xios_is_valid_filegroup(cdid) ) CALL xios_set_filegroup_attr( cdid, name=name, name_suffix=name_suffix )
[4148]	1886	CALL xios_solve_inheritance()
[3771]	1887	END SUBROUTINE iom_set_file_attr
[3695]	1888
	1889
[4148]	1890	SUBROUTINE iom_get_file_attr( cdid, name, name_suffix, output_freq )
[9019]	1891	!!----------------------------------------------------------------------
	1892	!!----------------------------------------------------------------------
[4148]	1893	CHARACTER(LEN=*) , INTENT(in ) :: cdid
[7646]	1894	CHARACTER(LEN=*),OPTIONAL , INTENT(out) :: name, name_suffix
	1895	TYPE(xios_duration), OPTIONAL , INTENT(out) :: output_freq
[4148]	1896	LOGICAL :: llexist1,llexist2,llexist3
	1897	!---------------------------------------------------------------------
	1898	IF( PRESENT( name ) ) name = '' ! default values
	1899	IF( PRESENT( name_suffix ) ) name_suffix = ''
[7646]	1900	IF( PRESENT( output_freq ) ) output_freq = xios_duration(0,0,0,0,0,0)
[9019]	1901	IF( xios_is_valid_file (cdid) ) THEN
[4148]	1902	CALL xios_solve_inheritance()
	1903	CALL xios_is_defined_file_attr ( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1904	IF(llexist1) CALL xios_get_file_attr ( cdid, name = name )
	1905	IF(llexist2) CALL xios_get_file_attr ( cdid, name_suffix = name_suffix )
	1906	IF(llexist3) CALL xios_get_file_attr ( cdid, output_freq = output_freq )
	1907	ENDIF
[9019]	1908	IF( xios_is_valid_filegroup(cdid) ) THEN
[4148]	1909	CALL xios_solve_inheritance()
	1910	CALL xios_is_defined_filegroup_attr( cdid, name = llexist1, name_suffix = llexist2, output_freq = llexist3)
	1911	IF(llexist1) CALL xios_get_filegroup_attr( cdid, name = name )
	1912	IF(llexist2) CALL xios_get_filegroup_attr( cdid, name_suffix = name_suffix )
	1913	IF(llexist3) CALL xios_get_filegroup_attr( cdid, output_freq = output_freq )
	1914	ENDIF
	1915	END SUBROUTINE iom_get_file_attr
	1916
	1917
	1918	SUBROUTINE iom_set_grid_attr( cdid, mask )
[9019]	1919	!!----------------------------------------------------------------------
	1920	!!----------------------------------------------------------------------
[4148]	1921	CHARACTER(LEN=*) , INTENT(in) :: cdid
[3771]	1922	LOGICAL, DIMENSION(:,:,:), OPTIONAL, INTENT(in) :: mask
[9019]	1923	!!----------------------------------------------------------------------
	1924	IF( xios_is_valid_grid (cdid) ) CALL xios_set_grid_attr ( cdid, mask_3D=mask )
	1925	IF( xios_is_valid_gridgroup(cdid) ) CALL xios_set_gridgroup_attr( cdid, mask_3D=mask )
[4148]	1926	CALL xios_solve_inheritance()
[3771]	1927	END SUBROUTINE iom_set_grid_attr
[3695]	1928
[4152]	1929	SUBROUTINE iom_setkt( kt, cdname )
[9019]	1930	!!----------------------------------------------------------------------
	1931	!!----------------------------------------------------------------------
[4152]	1932	INTEGER , INTENT(in) :: kt
	1933	CHARACTER(LEN=*), INTENT(in) :: cdname
[9019]	1934	!!----------------------------------------------------------------------
[4152]	1935	CALL iom_swap( cdname ) ! swap to cdname context
	1936	CALL xios_update_calendar(kt)
[9019]	1937	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4152]	1938	END SUBROUTINE iom_setkt
[3695]	1939
[4152]	1940	SUBROUTINE iom_context_finalize( cdname )
[9019]	1941	!!----------------------------------------------------------------------
	1942	!!----------------------------------------------------------------------
[4152]	1943	CHARACTER(LEN=*), INTENT(in) :: cdname
[9367]	1944	CHARACTER(LEN=120) :: clname
[9019]	1945	!!----------------------------------------------------------------------
[9367]	1946	clname = cdname
	1947	IF( TRIM(Agrif_CFixed()) .NE. '0' ) clname = TRIM(Agrif_CFixed())//"_"//clname
	1948	IF( xios_is_valid_context(clname) ) THEN
[4990]	1949	CALL iom_swap( cdname ) ! swap to cdname context
	1950	CALL xios_context_finalize() ! finalize the context
[5407]	1951	IF( cdname /= TRIM(cxios_context) ) CALL iom_swap( TRIM(cxios_context) ) ! return back to nemo context
[4990]	1952	ENDIF
[9367]	1953	!
[4152]	1954	END SUBROUTINE iom_context_finalize
	1955
	1956
[9984]	1957	SUBROUTINE set_grid( cdgrd, plon, plat, ldxios, ldrxios )
[1359]	1958	!!----------------------------------------------------------------------
[4148]	1959	!! * ROUTINE set_grid *
[1359]	1960	!!
[1725]	1961	!! ** Purpose : define horizontal grids
[1359]	1962	!!----------------------------------------------------------------------
[3771]	1963	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
[1359]	1964	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plon
	1965	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
[3771]	1966	!
[9019]	1967	INTEGER :: ni, nj
[3771]	1968	REAL(wp), DIMENSION(jpi,jpj,jpk) :: zmask
[9984]	1969	LOGICAL, INTENT(IN) :: ldxios, ldrxios
[9019]	1970	!!----------------------------------------------------------------------
	1971	!
	1972	ni = nlei-nldi+1
	1973	nj = nlej-nldj+1
	1974	!
[7646]	1975	CALL iom_set_domain_attr("grid_"//cdgrd, ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[3771]	1976	CALL iom_set_domain_attr("grid_"//cdgrd, data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
[9984]	1977	!don't define lon and lat for restart reading context.
	1978	IF ( .NOT.ldrxios ) &
	1979	CALL iom_set_domain_attr("grid_"//cdgrd, lonvalue = RESHAPE(plon(nldi:nlei, nldj:nlej),(/ ni*nj /)), &
[3771]	1980	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[9019]	1981	!
[9367]	1982	IF ( ln_mskland .AND. (.NOT.ldxios) ) THEN
[3771]	1983	! mask land points, keep values on coast line -> specific mask for U, V and W points
	1984	SELECT CASE ( cdgrd )
	1985	CASE('T') ; zmask(:,:,:) = tmask(:,:,:)
[10425]	1986	CASE('U') ; zmask(2:jpim1,:,:) = tmask(2:jpim1,:,:) + tmask(3:jpi,:,:) ; CALL lbc_lnk( 'iom', zmask, 'U', 1. )
	1987	CASE('V') ; zmask(:,2:jpjm1,:) = tmask(:,2:jpjm1,:) + tmask(:,3:jpj,:) ; CALL lbc_lnk( 'iom', zmask, 'V', 1. )
[3771]	1988	CASE('W') ; zmask(:,:,2:jpk ) = tmask(:,:,1:jpkm1) + tmask(:,:,2:jpk) ; zmask(:,:,1) = tmask(:,:,1)
	1989	END SELECT
	1990	!
[7646]	1991	CALL iom_set_domain_attr( "grid_"//cdgrd , mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,1),(/ni*nj /)) /= 0. )
[4148]	1992	CALL iom_set_grid_attr ( "grid_"//cdgrd//"_3D", mask = RESHAPE(zmask(nldi:nlei,nldj:nlej,:),(/ni,nj,jpk/)) /= 0. )
[3771]	1993	ENDIF
[9019]	1994	!
[1359]	1995	END SUBROUTINE set_grid
	1996
[1725]	1997
[5415]	1998	SUBROUTINE set_grid_bounds( cdgrd, plon_cnr, plat_cnr, plon_pnt, plat_pnt )
[5363]	1999	!!----------------------------------------------------------------------
	2000	!! * ROUTINE set_grid_bounds *
	2001	!!
	2002	!! ** Purpose : define horizontal grid corners
	2003	!!
	2004	!!----------------------------------------------------------------------
[9019]	2005	CHARACTER(LEN=1) , INTENT(in) :: cdgrd
	2006	REAL(wp), DIMENSION(jpi,jpj) , INTENT(in) :: plon_cnr, plat_cnr ! Lat/lon coord. of a contiguous vertex of cell (i,j)
	2007	REAL(wp), DIMENSION(jpi,jpj), OPTIONAL, INTENT(in) :: plon_pnt, plat_pnt ! Lat/lon coord. of the point of cell (i,j)
[5363]	2008	!
[9019]	2009	INTEGER :: ji, jj, jn, ni, nj
[12377]	2010	INTEGER :: icnr, jcnr ! Offset such that the vertex coordinate (i+icnr,j+jcnr)
	2011	! ! represents the bottom-left corner of cell (i,j)
[9019]	2012	REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: z_bnds ! Lat/lon coordinates of the vertices of cell (i,j)
	2013	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_fld ! Working array to determine where to rotate cells
	2014	REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: z_rot ! Lat/lon working array for rotation of cells
	2015	!!----------------------------------------------------------------------
[5415]	2016	!
[9019]	2017	ALLOCATE( z_bnds(4,jpi,jpj,2), z_fld(jpi,jpj), z_rot(4,2) )
[5363]	2018	!
[5415]	2019	! Offset of coordinate representing bottom-left corner
[5363]	2020	SELECT CASE ( TRIM(cdgrd) )
[9019]	2021	CASE ('T', 'W') ; icnr = -1 ; jcnr = -1
	2022	CASE ('U') ; icnr = 0 ; jcnr = -1
	2023	CASE ('V') ; icnr = -1 ; jcnr = 0
[5363]	2024	END SELECT
[9019]	2025	!
	2026	ni = nlei-nldi+1 ! Dimensions of subdomain interior
	2027	nj = nlej-nldj+1
	2028	!
[5363]	2029	z_fld(:,:) = 1._wp
[10425]	2030	CALL lbc_lnk( 'iom', z_fld, cdgrd, -1. ) ! Working array for location of northfold
[9019]	2031	!
[5363]	2032	! Cell vertices that can be defined
	2033	DO jj = 2, jpjm1
	2034	DO ji = 2, jpim1
[5415]	2035	z_bnds(1,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	2036	z_bnds(2,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	2037	z_bnds(3,ji,jj,1) = plat_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	2038	z_bnds(4,ji,jj,1) = plat_cnr(ji+icnr, jj+jcnr+1) ! Top-left
	2039	z_bnds(1,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr ) ! Bottom-left
	2040	z_bnds(2,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr ) ! Bottom-right
	2041	z_bnds(3,ji,jj,2) = plon_cnr(ji+icnr+1,jj+jcnr+1) ! Top-right
	2042	z_bnds(4,ji,jj,2) = plon_cnr(ji+icnr, jj+jcnr+1) ! Top-left
[5363]	2043	END DO
	2044	END DO
[9019]	2045	!
[5363]	2046	! Cell vertices on boundries
	2047	DO jn = 1, 4
[11536]	2048	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,1), cdgrd, 1., pfillval=999._wp )
	2049	CALL lbc_lnk( 'iom', z_bnds(jn,:,:,2), cdgrd, 1., pfillval=999._wp )
[5363]	2050	END DO
[9019]	2051	!
[5415]	2052	! Zero-size cells at closed boundaries if cell points provided,
	2053	! otherwise they are closed cells with unrealistic bounds
	2054	IF( PRESENT(plon_pnt) .AND. PRESENT(plat_pnt) ) THEN
	2055	IF( (nbondi == -1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2056	DO jn = 1, 4 ! (West or jpni = 1), closed E-W
	2057	z_bnds(jn,1,:,1) = plat_pnt(1,:) ; z_bnds(jn,1,:,2) = plon_pnt(1,:)
	2058	END DO
	2059	ENDIF
	2060	IF( (nbondi == 1 .OR. nbondi == 2) .AND. .NOT. (jperio == 1 .OR. jperio == 4 .OR. jperio == 6) ) THEN
	2061	DO jn = 1, 4 ! (East or jpni = 1), closed E-W
	2062	z_bnds(jn,nlci,:,1) = plat_pnt(nlci,:) ; z_bnds(jn,nlci,:,2) = plon_pnt(nlci,:)
	2063	END DO
	2064	ENDIF
	2065	IF( nbondj == -1 .OR. (nbondj == 2 .AND. jperio /= 2) ) THEN
	2066	DO jn = 1, 4 ! South or (jpnj = 1, not symmetric)
	2067	z_bnds(jn,:,1,1) = plat_pnt(:,1) ; z_bnds(jn,:,1,2) = plon_pnt(:,1)
	2068	END DO
	2069	ENDIF
	2070	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio < 3 ) THEN
	2071	DO jn = 1, 4 ! (North or jpnj = 1), no north fold
	2072	z_bnds(jn,:,nlcj,1) = plat_pnt(:,nlcj) ; z_bnds(jn,:,nlcj,2) = plon_pnt(:,nlcj)
	2073	END DO
	2074	ENDIF
[5363]	2075	ENDIF
[9019]	2076	!
	2077	IF( (nbondj == 1 .OR. nbondj == 2) .AND. jperio >= 3 ) THEN ! Rotate cells at the north fold
[5363]	2078	DO jj = 1, jpj
	2079	DO ji = 1, jpi
	2080	IF( z_fld(ji,jj) == -1. ) THEN
	2081	z_rot(1,:) = z_bnds(3,ji,jj,:) ; z_rot(2,:) = z_bnds(4,ji,jj,:)
	2082	z_rot(3,:) = z_bnds(1,ji,jj,:) ; z_rot(4,:) = z_bnds(2,ji,jj,:)
	2083	z_bnds(:,ji,jj,:) = z_rot(:,:)
	2084	ENDIF
	2085	END DO
	2086	END DO
[9019]	2087	ELSE IF( nbondj == 2 .AND. jperio == 2 ) THEN ! Invert cells at the symmetric equator
[5363]	2088	DO ji = 1, jpi
	2089	z_rot(1:2,:) = z_bnds(3:4,ji,1,:)
	2090	z_rot(3:4,:) = z_bnds(1:2,ji,1,:)
	2091	z_bnds(:,ji,1,:) = z_rot(:,:)
	2092	END DO
	2093	ENDIF
[9019]	2094	!
[5363]	2095	CALL iom_set_domain_attr("grid_"//cdgrd, bounds_lat = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,1),(/ 4,ni*nj /)), &
[9019]	2096	& bounds_lon = RESHAPE(z_bnds(:,nldi:nlei,nldj:nlej,2),(/ 4,ni*nj /)), nvertex=4 )
	2097	!
[5415]	2098	DEALLOCATE( z_bnds, z_fld, z_rot )
[9019]	2099	!
[5363]	2100	END SUBROUTINE set_grid_bounds
	2101
	2102
[5385]	2103	SUBROUTINE set_grid_znl( plat )
	2104	!!----------------------------------------------------------------------
	2105	!! * ROUTINE set_grid_znl *
	2106	!!
	2107	!! ** Purpose : define grids for zonal mean
	2108	!!
	2109	!!----------------------------------------------------------------------
	2110	REAL(wp), DIMENSION(jpi,jpj), INTENT(in) :: plat
	2111	!
[9019]	2112	INTEGER :: ni, nj, ix, iy
[5385]	2113	REAL(wp), DIMENSION(:), ALLOCATABLE :: zlon
[9019]	2114	!!----------------------------------------------------------------------
	2115	!
	2116	ni=nlei-nldi+1 ! define zonal mean domain (jpj*jpk)
	2117	nj=nlej-nldj+1
	2118	ALLOCATE( zlon(ni*nj) ) ; zlon(:) = 0._wp
	2119	!
[12276]	2120	! CALL dom_ngb( -168.53, 65.03, ix, iy, 'T' ) ! i-line that passes through Bering Strait: Reference latitude (used in plots)
	2121	CALL dom_ngb( 180., 90., ix, iy, 'T' ) ! i-line that passes near the North Pole : Reference latitude (used in plots)
[7646]	2122	CALL iom_set_domain_attr("gznl", ni_glo=jpiglo, nj_glo=jpjglo, ibegin=nimpp+nldi-2, jbegin=njmpp+nldj-2, ni=ni, nj=nj)
[5385]	2123	CALL iom_set_domain_attr("gznl", data_dim=2, data_ibegin = 1-nldi, data_ni = jpi, data_jbegin = 1-nldj, data_nj = jpj)
	2124	CALL iom_set_domain_attr("gznl", lonvalue = zlon, &
	2125	& latvalue = RESHAPE(plat(nldi:nlei, nldj:nlej),(/ ni*nj /)))
[12276]	2126	CALL iom_set_zoom_domain_attr("ptr", ibegin=ix-1, jbegin=0, ni=1, nj=jpjglo)
[5385]	2127	!
	2128	CALL iom_update_file_name('ptr')
	2129	!
	2130	END SUBROUTINE set_grid_znl
	2131
[9019]	2132
[1738]	2133	SUBROUTINE set_scalar
	2134	!!----------------------------------------------------------------------
[4148]	2135	!! * ROUTINE set_scalar *
[1738]	2136	!!
	2137	!! ** Purpose : define fake grids for scalar point
	2138	!!
	2139	!!----------------------------------------------------------------------
[5426]	2140	REAL(wp), DIMENSION(1) :: zz = 1.
[1738]	2141	!!----------------------------------------------------------------------
[9019]	2142	!
[7646]	2143	CALL iom_set_domain_attr('scalarpoint', ni_glo=jpnij, nj_glo=1, ibegin=narea-1, jbegin=0, ni=1, nj=1)
[5426]	2144	CALL iom_set_domain_attr('scalarpoint', data_dim=2, data_ibegin = 1, data_ni = 1, data_jbegin = 1, data_nj = 1)
[9019]	2145	!
	2146	zz = REAL( narea, wp )
[5426]	2147	CALL iom_set_domain_attr('scalarpoint', lonvalue=zz, latvalue=zz)
[9019]	2148	!
[1738]	2149	END SUBROUTINE set_scalar
	2150
	2151
[1725]	2152	SUBROUTINE set_xmlatt
	2153	!!----------------------------------------------------------------------
[4148]	2154	!! * ROUTINE set_xmlatt *
[1725]	2155	!!
	2156	!! ** Purpose : automatic definitions of some of the xml attributs...
	2157	!!
	2158	!!----------------------------------------------------------------------
	2159	CHARACTER(len=1),DIMENSION( 3) :: clgrd ! suffix name
[4148]	2160	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2161	CHARACTER(len=1) :: cl1 ! 1 character
[5003]	2162	CHARACTER(len=2) :: cl2 ! 2 characters
	2163	CHARACTER(len=3) :: cl3 ! 3 characters
[4148]	2164	INTEGER :: ji, jg ! loop counters
[1725]	2165	INTEGER :: ix, iy ! i-,j- index
	2166	REAL(wp) ,DIMENSION(11) :: zlontao ! longitudes of tao moorings
	2167	REAL(wp) ,DIMENSION( 7) :: zlattao ! latitudes of tao moorings
	2168	REAL(wp) ,DIMENSION( 4) :: zlonrama ! longitudes of rama moorings
	2169	REAL(wp) ,DIMENSION(11) :: zlatrama ! latitudes of rama moorings
	2170	REAL(wp) ,DIMENSION( 3) :: zlonpira ! longitudes of pirata moorings
	2171	REAL(wp) ,DIMENSION( 9) :: zlatpira ! latitudes of pirata moorings
[7646]	2172	TYPE(xios_duration) :: f_op, f_of
[1725]	2173	!!----------------------------------------------------------------------
	2174	!
	2175	! frequency of the call of iom_put (attribut: freq_op)
[9019]	2176	f_op%timestep = 1 ; f_of%timestep = 0 ; CALL iom_set_field_attr('field_definition', freq_op=f_op, freq_offset=f_of)
	2177	f_op%timestep = 2 ; f_of%timestep = 0 ; CALL iom_set_field_attr('trendT_even' , freq_op=f_op, freq_offset=f_of)
	2178	f_op%timestep = 2 ; f_of%timestep = -1 ; CALL iom_set_field_attr('trendT_odd' , freq_op=f_op, freq_offset=f_of)
	2179	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC' , freq_op=f_op, freq_offset=f_of)
	2180	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('SBC_scalar' , freq_op=f_op, freq_offset=f_of)
[12377]	2181	f_op%timestep = nn_fsbc ; f_of%timestep = 0 ; CALL iom_set_field_attr('ABL' , freq_op=f_op, freq_offset=f_of)
[7646]	2182
[1725]	2183	! output file names (attribut: name)
[4148]	2184	DO ji = 1, 9
	2185	WRITE(cl1,'(i1)') ji
	2186	CALL iom_update_file_name('file'//cl1)
[1725]	2187	END DO
[4148]	2188	DO ji = 1, 99
	2189	WRITE(cl2,'(i2.2)') ji
	2190	CALL iom_update_file_name('file'//cl2)
	2191	END DO
[5003]	2192	DO ji = 1, 999
	2193	WRITE(cl3,'(i3.3)') ji
	2194	CALL iom_update_file_name('file'//cl3)
	2195	END DO
[1725]	2196
	2197	! Zooms...
	2198	clgrd = (/ 'T', 'U', 'W' /)
	2199	DO jg = 1, SIZE(clgrd) ! grid type
	2200	cl1 = clgrd(jg)
	2201	! Equatorial section (attributs: jbegin, ni, name_suffix)
	2202	CALL dom_ngb( 0., 0., ix, iy, cl1 )
[9930]	2203	CALL iom_set_zoom_domain_attr('Eq'//cl1, ibegin=0, jbegin=iy-1, ni=jpiglo, nj=1 )
[4148]	2204	CALL iom_get_file_attr ('Eq'//cl1, name_suffix = clsuff )
	2205	CALL iom_set_file_attr ('Eq'//cl1, name_suffix = TRIM(clsuff)//'_Eq')
	2206	CALL iom_update_file_name('Eq'//cl1)
[1725]	2207	END DO
	2208	! TAO moorings (attributs: ibegin, jbegin, name_suffix)
	2209	zlontao = (/ 137.0, 147.0, 156.0, 165.0, -180.0, -170.0, -155.0, -140.0, -125.0, -110.0, -95.0 /)
	2210	zlattao = (/ -8.0, -5.0, -2.0, 0.0, 2.0, 5.0, 8.0 /)
	2211	CALL set_mooring( zlontao, zlattao )
	2212	! RAMA moorings (attributs: ibegin, jbegin, name_suffix)
	2213	zlonrama = (/ 55.0, 67.0, 80.5, 90.0 /)
	2214	zlatrama = (/ -16.0, -12.0, -8.0, -4.0, -1.5, 0.0, 1.5, 4.0, 8.0, 12.0, 15.0 /)
	2215	CALL set_mooring( zlonrama, zlatrama )
	2216	! PIRATA moorings (attributs: ibegin, jbegin, name_suffix)
	2217	zlonpira = (/ -38.0, -23.0, -10.0 /)
	2218	zlatpira = (/ -19.0, -14.0, -8.0, 0.0, 4.0, 8.0, 12.0, 15.0, 20.0 /)
	2219	CALL set_mooring( zlonpira, zlatpira )
[9019]	2220	!
[1725]	2221	END SUBROUTINE set_xmlatt
	2222
	2223
[9019]	2224	SUBROUTINE set_mooring( plon, plat )
[1725]	2225	!!----------------------------------------------------------------------
[4148]	2226	!! * ROUTINE set_mooring *
[1725]	2227	!!
	2228	!! ** Purpose : automatic definitions of moorings xml attributs...
	2229	!!
	2230	!!----------------------------------------------------------------------
[9019]	2231	REAL(wp), DIMENSION(:), INTENT(in) :: plon, plat ! longitudes/latitudes oft the mooring
[1725]	2232	!
	2233	!!$ CHARACTER(len=1),DIMENSION(4) :: clgrd = (/ 'T', 'U', 'V', 'W' /) ! suffix name
	2234	CHARACTER(len=1),DIMENSION(1) :: clgrd = (/ 'T' /) ! suffix name
[4148]	2235	CHARACTER(len=256) :: clname ! file name
	2236	CHARACTER(len=256) :: clsuff ! suffix name
[1725]	2237	CHARACTER(len=1) :: cl1 ! 1 character
	2238	CHARACTER(len=6) :: clon,clat ! name of longitude, latitude
	2239	INTEGER :: ji, jj, jg ! loop counters
	2240	INTEGER :: ix, iy ! i-,j- index
	2241	REAL(wp) :: zlon, zlat
	2242	!!----------------------------------------------------------------------
	2243	DO jg = 1, SIZE(clgrd)
	2244	cl1 = clgrd(jg)
	2245	DO ji = 1, SIZE(plon)
	2246	DO jj = 1, SIZE(plat)
	2247	zlon = plon(ji)
	2248	zlat = plat(jj)
	2249	! modifications for RAMA moorings
	2250	IF( zlon == 67. .AND. zlat == 15. ) zlon = 65.
	2251	IF( zlon == 90. .AND. zlat <= -4. ) zlon = 95.
	2252	IF( zlon == 95. .AND. zlat == -4. ) zlat = -5.
	2253	! modifications for PIRATA moorings
	2254	IF( zlon == -38. .AND. zlat == -19. ) zlon = -34.
	2255	IF( zlon == -38. .AND. zlat == -14. ) zlon = -32.
	2256	IF( zlon == -38. .AND. zlat == -8. ) zlon = -30.
	2257	IF( zlon == -38. .AND. zlat == 0. ) zlon = -35.
	2258	IF( zlon == -23. .AND. zlat == 20. ) zlat = 21.
	2259	IF( zlon == -10. .AND. zlat == -14. ) zlat = -10.
	2260	IF( zlon == -10. .AND. zlat == -8. ) zlat = -6.
	2261	IF( zlon == -10. .AND. zlat == 4. ) THEN ; zlon = 0. ; zlat = 0. ; ENDIF
	2262	CALL dom_ngb( zlon, zlat, ix, iy, cl1 )
	2263	IF( zlon >= 0. ) THEN
	2264	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT( zlon), 'e'
	2265	ELSE ; WRITE(clon, '(f5.1,a)') zlon , 'e'
	2266	ENDIF
	2267	ELSE
	2268	IF( zlon == REAL(NINT(zlon), wp) ) THEN ; WRITE(clon, '(i3, a)') NINT(-zlon), 'w'
	2269	ELSE ; WRITE(clon, '(f5.1,a)') -zlon , 'w'
	2270	ENDIF
	2271	ENDIF
	2272	IF( zlat >= 0. ) THEN
	2273	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT( zlat), 'n'
	2274	ELSE ; WRITE(clat, '(f4.1,a)') zlat , 'n'
	2275	ENDIF
	2276	ELSE
	2277	IF( zlat == REAL(NINT(zlat), wp) ) THEN ; WRITE(clat, '(i2, a)') NINT(-zlat), 's'
	2278	ELSE ; WRITE(clat, '(f4.1,a)') -zlat , 's'
	2279	ENDIF
	2280	ENDIF
	2281	clname = TRIM(ADJUSTL(clat))//TRIM(ADJUSTL(clon))
[9930]	2282	CALL iom_set_zoom_domain_attr(TRIM(clname)//cl1, ibegin= ix-1, jbegin= iy-1, ni=1, nj=1)
[7646]	2283
[4148]	2284	CALL iom_get_file_attr (TRIM(clname)//cl1, name_suffix = clsuff )
	2285	CALL iom_set_file_attr (TRIM(clname)//cl1, name_suffix = TRIM(clsuff)//'_'//TRIM(clname))
	2286	CALL iom_update_file_name(TRIM(clname)//cl1)
[1725]	2287	END DO
	2288	END DO
	2289	END DO
	2290
	2291	END SUBROUTINE set_mooring
	2292
[4148]	2293
	2294	SUBROUTINE iom_update_file_name( cdid )
	2295	!!----------------------------------------------------------------------
	2296	!! * ROUTINE iom_update_file_name *
	2297	!!
	2298	!! ** Purpose :
	2299	!!
	2300	!!----------------------------------------------------------------------
	2301	CHARACTER(LEN=*) , INTENT(in) :: cdid
	2302	!
	2303	CHARACTER(LEN=256) :: clname
	2304	CHARACTER(LEN=20) :: clfreq
	2305	CHARACTER(LEN=20) :: cldate
	2306	INTEGER :: idx
	2307	INTEGER :: jn
	2308	INTEGER :: itrlen
	2309	INTEGER :: iyear, imonth, iday, isec
	2310	REAL(wp) :: zsec
	2311	LOGICAL :: llexist
[7646]	2312	TYPE(xios_duration) :: output_freq
[4148]	2313	!!----------------------------------------------------------------------
[9019]	2314	!
	2315	DO jn = 1, 2
	2316	!
[7646]	2317	output_freq = xios_duration(0,0,0,0,0,0)
	2318	IF( jn == 1 ) CALL iom_get_file_attr( cdid, name = clname, output_freq = output_freq )
[4148]	2319	IF( jn == 2 ) CALL iom_get_file_attr( cdid, name_suffix = clname )
[9019]	2320	!
[4148]	2321	IF ( TRIM(clname) /= '' ) THEN
[9019]	2322	!
[4148]	2323	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2324	DO WHILE ( idx /= 0 )
	2325	clname = clname(1:idx-1)//TRIM(cexper)//clname(idx+9:LEN_TRIM(clname))
	2326	idx = INDEX(clname,'@expname@') + INDEX(clname,'@EXPNAME@')
	2327	END DO
[9019]	2328	!
[4148]	2329	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
	2330	DO WHILE ( idx /= 0 )
[7646]	2331	IF ( output_freq%timestep /= 0) THEN
	2332	WRITE(clfreq,'(I18,A2)')INT(output_freq%timestep),'ts'
	2333	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7764]	2334	ELSE IF ( output_freq%second /= 0 ) THEN
	2335	WRITE(clfreq,'(I19,A1)')INT(output_freq%second),'s'
	2336	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2337	ELSE IF ( output_freq%minute /= 0 ) THEN
[7768]	2338	WRITE(clfreq,'(I18,A2)')INT(output_freq%minute),'mi'
[7764]	2339	itrlen = LEN_TRIM(ADJUSTL(clfreq))
[7646]	2340	ELSE IF ( output_freq%hour /= 0 ) THEN
	2341	WRITE(clfreq,'(I19,A1)')INT(output_freq%hour),'h'
	2342	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2343	ELSE IF ( output_freq%day /= 0 ) THEN
	2344	WRITE(clfreq,'(I19,A1)')INT(output_freq%day),'d'
	2345	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2346	ELSE IF ( output_freq%month /= 0 ) THEN
	2347	WRITE(clfreq,'(I19,A1)')INT(output_freq%month),'m'
	2348	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2349	ELSE IF ( output_freq%year /= 0 ) THEN
	2350	WRITE(clfreq,'(I19,A1)')INT(output_freq%year),'y'
	2351	itrlen = LEN_TRIM(ADJUSTL(clfreq))
	2352	ELSE
[4148]	2353	CALL ctl_stop('error in the name of file id '//TRIM(cdid), &
	2354	& ' attribute output_freq is undefined -> cannot replace @freq@ in '//TRIM(clname) )
[7646]	2355	ENDIF
	2356	clname = clname(1:idx-1)//TRIM(ADJUSTL(clfreq))//clname(idx+6:LEN_TRIM(clname))
	2357	idx = INDEX(clname,'@freq@') + INDEX(clname,'@FREQ@')
[4148]	2358	END DO
[9019]	2359	!
[4148]	2360	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2361	DO WHILE ( idx /= 0 )
[12511]	2362	cldate = iom_sdate( fjulday - rn_Dt / rday )
[4148]	2363	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+11:LEN_TRIM(clname))
	2364	idx = INDEX(clname,'@startdate@') + INDEX(clname,'@STARTDATE@')
	2365	END DO
[9019]	2366	!
[4148]	2367	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2368	DO WHILE ( idx /= 0 )
[12511]	2369	cldate = iom_sdate( fjulday - rn_Dt / rday, ldfull = .TRUE. )
[4148]	2370	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+15:LEN_TRIM(clname))
	2371	idx = INDEX(clname,'@startdatefull@') + INDEX(clname,'@STARTDATEFULL@')
	2372	END DO
[9019]	2373	!
[4148]	2374	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2375	DO WHILE ( idx /= 0 )
[12511]	2376	cldate = iom_sdate( fjulday + rn_Dt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE. )
[4148]	2377	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+9:LEN_TRIM(clname))
	2378	idx = INDEX(clname,'@enddate@') + INDEX(clname,'@ENDDATE@')
	2379	END DO
[9019]	2380	!
[4148]	2381	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2382	DO WHILE ( idx /= 0 )
[12511]	2383	cldate = iom_sdate( fjulday + rn_Dt / rday * REAL( nitend - nit000, wp ), ld24 = .TRUE., ldfull = .TRUE. )
[4148]	2384	clname = clname(1:idx-1)//TRIM(cldate)//clname(idx+13:LEN_TRIM(clname))
	2385	idx = INDEX(clname,'@enddatefull@') + INDEX(clname,'@ENDDATEFULL@')
	2386	END DO
[9019]	2387	!
[12377]	2388	IF( jn == 1 .AND. TRIM(Agrif_CFixed()) /= '0' ) clname = TRIM(Agrif_CFixed())//"_"//TRIM(clname)
[4148]	2389	IF( jn == 1 ) CALL iom_set_file_attr( cdid, name = clname )
	2390	IF( jn == 2 ) CALL iom_set_file_attr( cdid, name_suffix = clname )
[9019]	2391	!
[4148]	2392	ENDIF
[9019]	2393	!
[4148]	2394	END DO
[9019]	2395	!
[4148]	2396	END SUBROUTINE iom_update_file_name
	2397
	2398
	2399	FUNCTION iom_sdate( pjday, ld24, ldfull )
	2400	!!----------------------------------------------------------------------
	2401	!! * ROUTINE iom_sdate *
	2402	!!
	2403	!! ** Purpose : send back the date corresponding to the given julian day
	2404	!!----------------------------------------------------------------------
[9019]	2405	REAL(wp), INTENT(in ) :: pjday ! julian day
	2406	LOGICAL , INTENT(in ), OPTIONAL :: ld24 ! true to force 24:00 instead of 00:00
	2407	LOGICAL , INTENT(in ), OPTIONAL :: ldfull ! true to get the compleate date: yyyymmdd_hh:mm:ss
[4148]	2408	!
	2409	CHARACTER(LEN=20) :: iom_sdate
	2410	CHARACTER(LEN=50) :: clfmt ! format used to write the date
	2411	INTEGER :: iyear, imonth, iday, ihour, iminute, isec
	2412	REAL(wp) :: zsec
	2413	LOGICAL :: ll24, llfull
[9019]	2414	!!----------------------------------------------------------------------
[4148]	2415	!
	2416	IF( PRESENT(ld24) ) THEN ; ll24 = ld24
	2417	ELSE ; ll24 = .FALSE.
	2418	ENDIF
[9019]	2419	!
[4148]	2420	IF( PRESENT(ldfull) ) THEN ; llfull = ldfull
	2421	ELSE ; llfull = .FALSE.
	2422	ENDIF
[9019]	2423	!
[4148]	2424	CALL ju2ymds( pjday, iyear, imonth, iday, zsec )
	2425	isec = NINT(zsec)
[9019]	2426	!
[4148]	2427	IF ( ll24 .AND. isec == 0 ) THEN ! 00:00 of the next day -> move to 24:00 of the current day
	2428	CALL ju2ymds( pjday - 1., iyear, imonth, iday, zsec )
	2429	isec = 86400
	2430	ENDIF
[9019]	2431	!
[4148]	2432	IF( iyear < 10000 ) THEN ; clfmt = "i4.4,2i2.2" ! format used to write the date
	2433	ELSE ; WRITE(clfmt, "('i',i1,',2i2.2')") INT(LOG10(REAL(iyear,wp))) + 1
	2434	ENDIF
[9019]	2435	!
[5656]	2436	!$AGRIF_DO_NOT_TREAT
[9019]	2437	! needed in the conv
[4148]	2438	IF( llfull ) THEN
	2439	clfmt = TRIM(clfmt)//",'_',i2.2,':',i2.2,':',i2.2"
	2440	ihour = isec / 3600
	2441	isec = MOD(isec, 3600)
	2442	iminute = isec / 60
	2443	isec = MOD(isec, 60)
	2444	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday, ihour, iminute, isec ! date of the end of run
	2445	ELSE
	2446	WRITE(iom_sdate, '('//TRIM(clfmt)//')') iyear, imonth, iday ! date of the end of run
	2447	ENDIF
[5656]	2448	!$AGRIF_END_DO_NOT_TREAT
[9019]	2449	!
[4148]	2450	END FUNCTION iom_sdate
	2451
[1359]	2452	#else
[9019]	2453	!!----------------------------------------------------------------------
	2454	!! NOT 'key_iomput' a few dummy routines
	2455	!!----------------------------------------------------------------------
[4152]	2456	SUBROUTINE iom_setkt( kt, cdname )
	2457	INTEGER , INTENT(in):: kt
	2458	CHARACTER(LEN=*), INTENT(in) :: cdname
	2459	IF( .FALSE. ) WRITE(numout,*) kt, cdname ! useless test to avoid compilation warnings
[1359]	2460	END SUBROUTINE iom_setkt
	2461
[4152]	2462	SUBROUTINE iom_context_finalize( cdname )
	2463	CHARACTER(LEN=*), INTENT(in) :: cdname
	2464	IF( .FALSE. ) WRITE(numout,*) cdname ! useless test to avoid compilation warnings
	2465	END SUBROUTINE iom_context_finalize
	2466
[12377]	2467	SUBROUTINE iom_update_file_name( cdid )
	2468	CHARACTER(LEN=*), INTENT(in) :: cdid
	2469	IF( .FALSE. ) WRITE(numout,*) cdid ! useless test to avoid compilation warnings
	2470	END SUBROUTINE iom_update_file_name
	2471
[1359]	2472	#endif
[4689]	2473
	2474	LOGICAL FUNCTION iom_use( cdname )
	2475	CHARACTER(LEN=*), INTENT(in) :: cdname
	2476	#if defined key_iomput
	2477	iom_use = xios_field_is_active( cdname )
	2478	#else
	2479	iom_use = .FALSE.
	2480	#endif
	2481	END FUNCTION iom_use
[11536]	2482
	2483	SUBROUTINE iom_miss_val( cdname, pmiss_val )
	2484	CHARACTER(LEN=*), INTENT(in ) :: cdname
	2485	REAL(wp) , INTENT(out) :: pmiss_val
	2486	#if defined key_iomput
	2487	! get missing value
	2488	CALL xios_get_field_attr( cdname, default_value = pmiss_val )
	2489	#else
	2490	IF( .FALSE. ) WRITE(numout,*) cdname, pmiss_val ! useless test to avoid compilation warnings
[12377]	2491	IF( .FALSE. ) pmiss_val = 0._wp ! useless assignment to avoid compilation warnings
[11536]	2492	#endif
	2493	END SUBROUTINE iom_miss_val
	2494
[544]	2495	!!======================================================================
	2496	END MODULE iom

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