| 1 | <?xml version="1.0"?> |
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| 2 | <simulation> |
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| 3 | |
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| 4 | <context id="nemo" time_origin="1900-01-01 00:00:00" > |
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| 5 | |
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| 6 | <!-- $id$ --> |
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| 7 | |
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| 8 | <!-- |
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| 9 | ============================================================================================================ |
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| 10 | = definition of all existing variables = |
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| 11 | = DO NOT CHANGE = |
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| 12 | ============================================================================================================ |
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| 13 | --> |
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| 14 | <field_definition src="./field_def.xml"/> |
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| 15 | <!-- |
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| 16 | ============================================================================================================ |
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| 17 | = output files definition = |
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| 18 | = Define your own files = |
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| 19 | = put the variables you want... = |
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| 20 | ============================================================================================================ |
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| 21 | --> |
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| 22 | |
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| 23 | <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4"> |
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| 24 | |
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| 25 | <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> |
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| 26 | <file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files --> |
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| 27 | <file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files --> |
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| 28 | <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files --> |
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| 29 | <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files --> |
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| 30 | <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files --> |
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| 31 | |
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| 32 | <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."> <!-- 1d files --> |
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| 33 | <file id="file1" name_suffix="_bioscalar" description="pisces sms variables" > |
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| 34 | <field field_ref="tdenit" name="tdenit" unit="TgN/yr" operation="instant" > tdenit * 14. * 86400. * 365. / 1e12 </field> |
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| 35 | <field field_ref="tnfix" name="tnfix" unit="TgN/yr" operation="instant" > tnfix * 14. * 86400. * 365. / 1e12 </field> |
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| 36 | <field field_ref="tcflx" name="tcflx" unit="PgC/yr" operation="instant" > tcflx * -1. * 12. * 86400. * 365. / 1e15 </field> |
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| 37 | <field field_ref="tcflxcum" name="tcflxcum" unit="PgC" operation="instant" > tcflxcum * -1. * 12. / 1e15 </field> |
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| 38 | <field field_ref="tcexp" name="tcexp" unit="PgC/yr" operation="instant" > tcexp * 12. * 86400. * 365. / 1e15 </field> |
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| 39 | <field field_ref="tintpp" name="tintpp" unit="PgC/yr" operation="instant" > tintpp * 12. * 86400. * 365. / 1e15 </field> |
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| 40 | <field field_ref="pno3tot" name="pno3tot" unit="umolN" > pno3tot * 16. / 122. * 1e6 </field> |
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| 41 | <field field_ref="ppo4tot" name="ppo4tot" unit="umolP" > ppo4tot * 1. / 122. * 1e6 </field> |
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| 42 | <field field_ref="psiltot" name="psiltot" unit="umolC" > psiltot * 1e6 </field> |
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| 43 | <field field_ref="palktot" name="palktot" unit="umolC" > palktot * 1e6 </field> |
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| 44 | <field field_ref="pfertot" name="pfertot" unit="nmolFe" > pfertot * 1e9 </field> |
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| 45 | </file> |
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| 46 | </file_group> |
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| 47 | |
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| 48 | <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files --> |
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| 49 | <file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."/> <!-- 5d files --> |
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| 50 | |
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| 51 | <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files --> |
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| 52 | |
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| 53 | <file id="file2" name_suffix="_ptrc_T" description="pisces sms variables" > |
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| 54 | <field field_ref="DIC" /> |
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| 55 | <field field_ref="Alkalini" /> |
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| 56 | <field field_ref="O2" /> |
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| 57 | <field field_ref="PO4" /> |
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| 58 | <field field_ref="Si" /> |
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| 59 | <field field_ref="Fer" /> |
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| 60 | <field field_ref="NCHL" /> |
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| 61 | <field field_ref="DCHL" /> |
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| 62 | <field field_ref="NO3" /> |
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| 63 | <field field_ref="DIC_13" /> |
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| 64 | <field field_ref="NO3_15" /> |
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| 65 | </file> |
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| 66 | |
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| 67 | <file id="file3" name_suffix="_diad_T" description="additional pisces diagnostics" > |
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| 68 | <field field_ref="Cflx" /> |
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| 69 | <field field_ref="Dpco2" /> |
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| 70 | <field field_ref="C13flx" /> |
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| 71 | </file> |
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| 72 | |
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| 73 | </file_group> |
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| 74 | <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files --> |
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| 75 | <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files --> |
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| 76 | <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files --> |
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| 77 | <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files --> |
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| 78 | |
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| 79 | <file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."> <!-- real yearly files --> |
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| 80 | |
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| 81 | <file id="file4" name_suffix="_ptrc_T" description="pisces sms variables" > |
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| 82 | <field field_ref="DIC" /> |
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| 83 | <field field_ref="Alkalini" /> |
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| 84 | <field field_ref="O2" /> |
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| 85 | <field field_ref="CaCO3" /> |
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| 86 | <field field_ref="PO4" /> |
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| 87 | <field field_ref="POC" /> |
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| 88 | <field field_ref="Si" /> |
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| 89 | <field field_ref="PHY" /> |
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| 90 | <field field_ref="ZOO" /> |
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| 91 | <field field_ref="DOC" /> |
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| 92 | <field field_ref="PHY2" /> |
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| 93 | <field field_ref="ZOO2" /> |
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| 94 | <field field_ref="DSi" /> |
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| 95 | <field field_ref="Fer" /> |
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| 96 | <field field_ref="BFe" /> |
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| 97 | <field field_ref="GOC" /> |
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| 98 | <field field_ref="SFe" /> |
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| 99 | <field field_ref="DFe" /> |
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| 100 | <field field_ref="GSi" /> |
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| 101 | <field field_ref="NFe" /> |
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| 102 | <field field_ref="NCHL" /> |
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| 103 | <field field_ref="DCHL" /> |
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| 104 | <field field_ref="NO3" /> |
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| 105 | <field field_ref="NH4" /> |
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| 106 | <field field_ref="DIC_13" /> |
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| 107 | <field field_ref="CaCO3_13" /> |
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| 108 | <field field_ref="NO3_15" /> |
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| 109 | <field field_ref="PHY_15" /> |
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| 110 | <field field_ref="PHY_13" /> |
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| 111 | <field field_ref="POC_15" /> |
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| 112 | <field field_ref="POC_13" /> |
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| 113 | <field field_ref="ZOO_15" /> |
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| 114 | <field field_ref="ZOO_13" /> |
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| 115 | <field field_ref="DOC_15" /> |
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| 116 | <field field_ref="DOC_13" /> |
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| 117 | <field field_ref="PHY2_15" /> |
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| 118 | <field field_ref="PHY2_13" /> |
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| 119 | <field field_ref="ZOO2_15" /> |
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| 120 | <field field_ref="ZOO2_13" /> |
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| 121 | <field field_ref="GOC_15" /> |
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| 122 | <field field_ref="GOC_13" /> |
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| 123 | <field field_ref="NH4_15" /> |
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| 124 | </file> |
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| 125 | |
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| 126 | <file id="file5" name_suffix="_diad_T" description="additional pisces diagnostics" > |
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| 127 | <field field_ref="PH" /> |
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| 128 | <field field_ref="CO3" /> |
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| 129 | <field field_ref="CO3sat" /> |
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| 130 | <field field_ref="PAR" /> |
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| 131 | <field field_ref="PPPHY" /> |
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| 132 | <field field_ref="PPPHY2" /> |
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| 133 | <field field_ref="PPNEWN" /> |
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| 134 | <field field_ref="PPNEWD" /> |
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| 135 | <field field_ref="PBSi" /> |
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| 136 | <field field_ref="PFeN" /> |
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| 137 | <field field_ref="PFeD" /> |
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| 138 | <field field_ref="xfracal" /> |
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| 139 | <field field_ref="PCAL" /> |
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| 140 | <field field_ref="DCAL" /> |
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| 141 | <field field_ref="GRAZ1" /> |
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| 142 | <field field_ref="GRAZ2" /> |
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| 143 | <field field_ref="EPC100" /> |
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| 144 | <field field_ref="EPFE100" /> |
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| 145 | <field field_ref="EPSI100" /> |
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| 146 | <field field_ref="EPCAL100" /> |
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| 147 | <field field_ref="Cflx" /> |
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| 148 | <field field_ref="C13flx" /> |
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| 149 | <field field_ref="Oflx" /> |
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| 150 | <field field_ref="Kg" /> |
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| 151 | <field field_ref="Dpco2" /> |
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| 152 | <field field_ref="Dpo2" /> |
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| 153 | <field field_ref="Heup" /> |
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| 154 | <field field_ref="Irondep" /> |
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| 155 | <field field_ref="Ironsed" /> |
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| 156 | <field field_ref="Ironice" /> |
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| 157 | <field field_ref="Nfix" /> |
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| 158 | <field field_ref="MuN" /> |
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| 159 | <field field_ref="MuD" /> |
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| 160 | <field field_ref="LNnut" /> |
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| 161 | <field field_ref="LDnut" /> |
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| 162 | <field field_ref="LNFe" /> |
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| 163 | <field field_ref="LDFe" /> |
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| 164 | <field field_ref="LNlight" /> |
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| 165 | <field field_ref="LDlight" /> |
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| 166 | <field field_ref="pdust" /> |
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| 167 | <field field_ref="Fe2" /> |
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| 168 | <field field_ref="Fe3" /> |
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| 169 | <field field_ref="FeL1" /> |
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| 170 | <field field_ref="FeL2" /> |
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| 171 | <field field_ref="FeP" /> |
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| 172 | <field field_ref="TL1" /> |
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| 173 | <field field_ref="TL2" /> |
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| 174 | <field field_ref="Sdenit" /> |
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| 175 | <field field_ref="Totlig" /> |
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| 176 | </file> |
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| 177 | |
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| 178 | </file_group> |
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| 179 | <file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files --> |
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| 180 | <file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files --> |
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| 181 | <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files --> |
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| 182 | |
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| 183 | </file_definition> |
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| 184 | |
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| 185 | <!-- |
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| 186 | ============================================================================================================ |
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| 187 | = grid definition = = DO NOT CHANGE = |
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| 188 | ============================================================================================================ |
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| 189 | --> |
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| 190 | |
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| 191 | <axis_definition> |
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| 192 | <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" /> |
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| 193 | <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" /> |
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| 194 | <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> |
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| 195 | <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> |
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| 196 | <axis id="nfloat" long_name="Float number" unit="1" /> |
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| 197 | <axis id="icbcla" long_name="Iceberg class" unit="1" /> |
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| 198 | <axis id="ncatice" long_name="Ice category" unit="1" /> |
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| 199 | <axis id="iax_20C" long_name="20 degC isotherm" unit="degC" /> |
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| 200 | <axis id="iax_28C" long_name="28 degC isotherm" unit="degC" /> |
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| 201 | </axis_definition> |
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| 202 | |
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| 203 | <domain_definition src="./domain_def.xml"/> |
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| 204 | |
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| 205 | <grid_definition> |
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| 206 | <grid id="grid_T_2D" domain_ref="grid_T"/> |
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| 207 | <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/> |
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| 208 | <grid id="grid_U_2D" domain_ref="grid_U"/> |
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| 209 | <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/> |
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| 210 | <grid id="grid_V_2D" domain_ref="grid_V"/> |
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| 211 | <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/> |
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| 212 | <grid id="grid_W_2D" domain_ref="grid_W"/> |
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| 213 | <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/> |
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| 214 | </grid_definition> |
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| 215 | |
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| 216 | </context> |
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| 217 | |
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| 218 | |
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| 219 | <context id="xios"> |
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| 220 | |
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| 221 | <variable_definition> |
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| 222 | |
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| 223 | <!-- |
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| 224 | We must have buffer_size > jpi*jpj*jpk*8 (with jpi and jpj the subdomain size) |
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| 225 | --> |
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| 226 | <variable id="buffer_size" type="integer">50000000</variable> |
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| 227 | <variable id="buffer_server_factor_size" type="integer">2</variable> |
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| 228 | <variable id="info_level" type="integer">0</variable> |
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| 229 | <variable id="using_server" type="boolean">false</variable> |
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| 230 | <variable id="using_oasis" type="boolean">false</variable> |
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| 231 | <variable id="oasis_codes_id" type="string" >oceanx</variable> |
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| 232 | |
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| 233 | </variable_definition> |
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| 234 | |
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| 235 | </context> |
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| 236 | |
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| 237 | </simulation> |
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