[15480] | 1 | #!/bin/bash |
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| 2 | |
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| 3 | INPUTPATH="/work/n01/n01/momme/AMM7-INPUTS" |
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| 4 | RUNPATH="/work/n01/n01/momme/AMM7" |
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| 5 | CONFIGPATH="$HOME"/git/NEMO-shelf/NEMOGCM/CONFIG/AMM7_FABM_ERSEM |
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| 6 | |
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| 7 | #prepare folders for annual atmospheric and lateral forcings: |
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| 8 | |
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| 9 | mkdir -p "$RUNPATH"/fluxes |
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| 10 | rm -rf "$RUNPATH"/fluxes/flx_y????.nc |
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| 11 | rm -rf "$RUNPATH"/fluxes/met_y????.nc |
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| 12 | rm -rf "$RUNPATH"/fluxes/strd_y????.nc |
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| 13 | rm -rf "$RUNPATH"/fluxes/ssrd24_y????.nc |
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| 14 | |
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| 15 | mkdir -p "$RUNPATH"/bdy |
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| 16 | |
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| 17 | #namelists: |
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| 18 | #rsync -a "$CONFIGPATH"/EXP00/namelist*_cfg.template $RUNPATH/ |
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| 19 | #rsync -a "$CONFIGPATH"/EXP00/namelist*_ref $RUNPATH/ |
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| 20 | #rsync -a "$CONFIGPATH"/EXP00/namelist*_ref $RUNPATH/ |
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| 21 | #rsync -a "$CONFIGPATH"/EXP00/iodef.xml $RUNPATH/ |
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| 22 | #rsync -a "$CONFIGPATH"/EXP00/domain_def.xml $RUNPATH/ |
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| 23 | #rsync -a "$CONFIGPATH"/EXP00/field_def.xml $RUNPATH/ |
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| 24 | |
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| 25 | #atmospheric deposition: |
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| 26 | |
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| 27 | #ln -sf "$INPUTPATH"/AtmosphericDeposition/AMM7_atn_weights.nc "$RUNPATH"/ |
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| 28 | #ln -sf "$INPUTPATH"/AtmosphericDeposition/EMEP_atmosnuts_1980_2009.nc "$RUNPATH"/ |
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| 29 | # |
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| 30 | #grid: |
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| 31 | #ln -sf "$INPUTPATH"/GRID/coordinates.nc "$RUNPATH"/ |
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| 32 | ln -sf "$INPUTPATH"/GRID/AMM7_coordinates.nc "$RUNPATH"/coordinates.nc |
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| 33 | ln -sf "$INPUTPATH"/GRID/coordinates.bdy.nc "$RUNPATH"/ |
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| 34 | ln -sf "$INPUTPATH"/GRID/coordinates.skagbdy.nc "$RUNPATH"/ |
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| 35 | ln -sf "$INPUTPATH"/GRID/bathy_meter.nc "$RUNPATH"/ |
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| 36 | |
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| 37 | #Light: |
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| 38 | ln -sf "$INPUTPATH"/Light/AMM7-ADY-broadband.nc "$RUNPATH/" |
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| 39 | ln -sf "$INPUTPATH"/Light/kd490.nc "$RUNPATH/" |
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| 40 | |
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| 41 | #interpolation weigths for surface flux forcing: |
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| 42 | ln -sf "$INPUTPATH"/FLUXES/weights_erai_amm7_bicubic.nc "$RUNPATH"/fluxes/ |
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| 43 | ln -sf "$INPUTPATH"/FLUXES/weights_erai_amm7_bilin.nc "$RUNPATH"/fluxes/ |
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| 44 | ln -sf "$INPUTPATH"/FLUXES/CUT_ERAI_LSM.nc "$RUNPATH"/fluxes/ |
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| 45 | |
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| 46 | #lateral boundaries from climatology: |
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| 47 | ln -sf "$INPUTPATH"/BDY/amm7skagbdy_trc.lowP.nc "$RUNPATH"/amm7skagbdy_trc.nc |
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| 48 | #ln -sf "$INPUTPATH"/BDY/amm7bdy_trc.nc "$RUNPATH"/ |
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| 49 | ln -sf "$INPUTPATH"/BDY/amm7bdy_trc.lowP.nc "$RUNPATH"/amm7bdy_trc.nc |
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| 50 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_K1_grid_T.nc "$RUNPATH"/bdy/ |
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| 51 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_K1_grid_U.nc "$RUNPATH"/bdy/ |
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| 52 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_K1_grid_V.nc "$RUNPATH"/bdy/ |
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| 53 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_K2_grid_T.nc "$RUNPATH"/bdy/ |
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| 54 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_K2_grid_U.nc "$RUNPATH"/bdy/ |
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| 55 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_K2_grid_V.nc "$RUNPATH"/bdy/ |
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| 56 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_L2_grid_T.nc "$RUNPATH"/bdy/ |
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| 57 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_L2_grid_U.nc "$RUNPATH"/bdy/ |
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| 58 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_L2_grid_V.nc "$RUNPATH"/bdy/ |
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| 59 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_M2_grid_T.nc "$RUNPATH"/bdy/ |
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| 60 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_M2_grid_U.nc "$RUNPATH"/bdy/ |
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| 61 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_M2_grid_V.nc "$RUNPATH"/bdy/ |
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| 62 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_M4_grid_T.nc "$RUNPATH"/bdy/ |
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| 63 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_M4_grid_U.nc "$RUNPATH"/bdy/ |
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| 64 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_M4_grid_V.nc "$RUNPATH"/bdy/ |
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| 65 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_MU2_grid_T.nc "$RUNPATH"/bdy/ |
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| 66 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_MU2_grid_U.nc "$RUNPATH"/bdy/ |
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| 67 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_MU2_grid_V.nc "$RUNPATH"/bdy/ |
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| 68 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_2N2_grid_T.nc "$RUNPATH"/bdy/ |
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| 69 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_2N2_grid_U.nc "$RUNPATH"/bdy/ |
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| 70 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_2N2_grid_V.nc "$RUNPATH"/bdy/ |
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| 71 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_N2_grid_T.nc "$RUNPATH"/bdy/ |
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| 72 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_N2_grid_U.nc "$RUNPATH"/bdy/ |
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| 73 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_N2_grid_V.nc "$RUNPATH"/bdy/ |
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| 74 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_NU2_grid_T.nc "$RUNPATH"/bdy/ |
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| 75 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_NU2_grid_U.nc "$RUNPATH"/bdy/ |
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| 76 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_NU2_grid_V.nc "$RUNPATH"/bdy/ |
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| 77 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_O1_grid_T.nc "$RUNPATH"/bdy/ |
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| 78 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_O1_grid_U.nc "$RUNPATH"/bdy/ |
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| 79 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_O1_grid_V.nc "$RUNPATH"/bdy/ |
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| 80 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_P1_grid_T.nc "$RUNPATH"/bdy/ |
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| 81 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_P1_grid_U.nc "$RUNPATH"/bdy/ |
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| 82 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_P1_grid_V.nc "$RUNPATH"/bdy/ |
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| 83 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_Q1_grid_T.nc "$RUNPATH"/bdy/ |
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| 84 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_Q1_grid_U.nc "$RUNPATH"/bdy/ |
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| 85 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_Q1_grid_V.nc "$RUNPATH"/bdy/ |
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| 86 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_S1_grid_T.nc "$RUNPATH"/bdy/ |
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| 87 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_S1_grid_U.nc "$RUNPATH"/bdy/ |
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| 88 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_S1_grid_V.nc "$RUNPATH"/bdy/ |
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| 89 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_S2_grid_T.nc "$RUNPATH"/bdy/ |
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| 90 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_S2_grid_U.nc "$RUNPATH"/bdy/ |
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| 91 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_S2_grid_V.nc "$RUNPATH"/bdy/ |
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| 92 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_T2_grid_T.nc "$RUNPATH"/bdy/ |
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| 93 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_T2_grid_U.nc "$RUNPATH"/bdy/ |
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| 94 | ln -sf "$INPUTPATH"/BDY/amm7_bdytide_T2_grid_V.nc "$RUNPATH"/bdy/ |
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