| 1 | #!/bin/bash |
|---|
| 2 | # Command line arguments: |
|---|
| 3 | # 1: simulation year |
|---|
| 4 | # |
|---|
| 5 | |
|---|
| 6 | INPUTPATH="/work/n01/n01/momme/AMM7-INPUTS" |
|---|
| 7 | RUNPATH="/work/n01/n01/momme/AMM7-v1" |
|---|
| 8 | y0=1995 |
|---|
| 9 | |
|---|
| 10 | yn=$1 |
|---|
| 11 | yb=$(( $yn-1 )) |
|---|
| 12 | ya=$(( $yn+1 )) |
|---|
| 13 | |
|---|
| 14 | #rivers: |
|---|
| 15 | if [ $(( yn % 4)) -ne 0 -o $(( yn % 100)) -eq 0 -a $(( yn % 400)) -ne 0 ] |
|---|
| 16 | then |
|---|
| 17 | ln -sf "$INPUTPATH"/RIVERS/rivers.ersem.nc "$RUNPATH"/rivers.nc |
|---|
| 18 | else |
|---|
| 19 | ln -sf "$INPUTPATH"/RIVERS/rivers.ersem.leap.nc "$RUNPATH"/rivers.nc |
|---|
| 20 | fi |
|---|
| 21 | |
|---|
| 22 | #prepare folders for annual atmospheric and lateral forcings: |
|---|
| 23 | mkdir -p "$RUNPATH"/fluxes |
|---|
| 24 | rm -rf "$RUNPATH"/fluxes/CUT_ERAI_INCLUDE_MSLP_y????m??d??.nc |
|---|
| 25 | mkdir -p "$RUNPATH"/bdy |
|---|
| 26 | rm -rf "$RUNPATH"/bdy/amm7*_y????m??d??.nc |
|---|
| 27 | |
|---|
| 28 | for y in $yb $yn $ya |
|---|
| 29 | do |
|---|
| 30 | #Atmospheric deposition of nutrients: |
|---|
| 31 | ln -sf "$INPUTPATH"/AtmosphericDeposition/AMM7-EMEP-NDeposition."$y".nc "$RUNPATH"/AMM7-EMEP-NDeposition_y"$y".nc |
|---|
| 32 | #ln -sf "$INPUTPATH"/AtmosphericDeposition/AMM7-EMEP-NDeposition."$y".nc "$RUNPATH"/AMM7-EMEP-NDeposition.nc |
|---|
| 33 | |
|---|
| 34 | #Atmospheric deposition of nutrients: |
|---|
| 35 | ln -sf "$INPUTPATH"/pCO2a/AMM7-pCO2a_y$y.nc "$RUNPATH"/ |
|---|
| 36 | |
|---|
| 37 | #atmospheric forcings: |
|---|
| 38 | ln -sf "$INPUTPATH"/FLUXES/CUT_ERAI_INCLUDE_MSLP_y"$y"m??d??.nc "$RUNPATH"/fluxes/ |
|---|
| 39 | |
|---|
| 40 | #lateral boundary conditions: |
|---|
| 41 | ln -sf "$INPUTPATH"/BDY/amm7_bdyT_y"$y"m??d??.nc "$RUNPATH"/bdy |
|---|
| 42 | #ln -sf "$INPUTPATH"/BDY/amm7_bdyU_y"$y"m??d??.nc "$RUNPATH"/bdy #only needed id full baroclinic velocity fields are required |
|---|
| 43 | #ln -sf "$INPUTPATH"/BDY/amm7_bdyV_y"$y"m??d??.nc "$RUNPATH"/bdy |
|---|
| 44 | ln -sf "$INPUTPATH"/BDY/amm7_bt_bdyT_y"$y"m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 45 | ln -sf "$INPUTPATH"/BDY/amm7_bt_bdyU_y"$y"m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 46 | ln -sf "$INPUTPATH"/BDY/amm7_bt_bdyV_y"$y"m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 47 | if [ $y -lt 1990 -o $y -gt 2009 ] |
|---|
| 48 | then |
|---|
| 49 | ln -sf "$INPUTPATH"/BDY/amm7skag_bdyT_m??d??.nc "$RUNPATH"/bdy |
|---|
| 50 | #ln -sf "$INPUTPATH"/BDY/amm7skag_bdyU_m??d??.nc "$RUNPATH"/bdy #only needed if full baroclinic velocity fields are required |
|---|
| 51 | #ln -sf "$INPUTPATH"/BDY/amm7skag_bdyV_m??d??.nc "$RUNPATH"/bdy |
|---|
| 52 | ln -sf "$INPUTPATH"/BDY/amm7skag_bt_bdyT_m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 53 | ln -sf "$INPUTPATH"/BDY/amm7skag_bt_bdyU_m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 54 | ln -sf "$INPUTPATH"/BDY/amm7skag_bt_bdyV_m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 55 | else |
|---|
| 56 | ln -sf "$INPUTPATH"/BDY/amm7skag_bdyT_y"$y"m??d??.nc "$RUNPATH"/bdy |
|---|
| 57 | #ln -sf "$INPUTPATH"/BDY/amm7skag_bdyU_y"$y"m??d??.nc "$RUNPATH"/bdy #only needed if full baroclinic velocity fields are required |
|---|
| 58 | #ln -sf "$INPUTPATH"/BDY/amm7skag_bdyV_y"$y"m??d??.nc "$RUNPATH"/bdy |
|---|
| 59 | ln -sf "$INPUTPATH"/BDY/amm7skag_bt_bdyT_y"$y"m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 60 | ln -sf "$INPUTPATH"/BDY/amm7skag_bt_bdyU_y"$y"m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 61 | ln -sf "$INPUTPATH"/BDY/amm7skag_bt_bdyV_y"$y"m??d??.nc "$RUNPATH"/bdy/ |
|---|
| 62 | fi |
|---|
| 63 | done |
|---|
