| 1 | <?xml version="1.0"?> |
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| 2 | <simulation> |
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| 3 | |
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| 4 | <context id="nemo" time_origin="1950-01-01 00:00:00" > |
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| 5 | |
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| 6 | <!-- $id$ --> |
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| 7 | |
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| 8 | <!-- |
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| 9 | ============================================================================================================ |
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| 10 | = definition of all existing variables = |
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| 11 | = DO NOT CHANGE = |
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| 12 | ============================================================================================================ |
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| 13 | --> |
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| 14 | <field_definition src="./field_def.xml"/> |
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| 15 | <field_definition src="./field_def_fabm.xml"/> |
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| 16 | <field_definition src="./field_def_custom.xml"/> |
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| 17 | <!-- |
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| 18 | ============================================================================================================ |
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| 19 | = output files definition = |
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| 20 | = Define your own files = |
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| 21 | = put the variables you want... = |
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| 22 | ============================================================================================================ |
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| 23 | --> |
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| 24 | |
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| 25 | <file_definition type="one_file" name="@expname@_@freq@" sync_freq="10d" min_digits="4"> |
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| 26 | |
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| 27 | <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> |
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| 28 | <file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files --> |
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| 29 | <file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files --> |
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| 30 | <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files --> |
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| 31 | <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files --> |
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| 32 | <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files --> |
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| 33 | <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."> <!-- 1d files --> |
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| 34 | <file id="file51" name_suffix="_BATS" description="BATS T grid variables" sync_freq="1d"> |
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| 35 | <field_group id="1d_bats" domain_ref="BATS"> |
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| 36 | <field field_ref="N1_p" operation="average" /> |
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| 37 | <field field_ref="N3_n" operation="average" /> |
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| 38 | <field field_ref="N4_n" operation="average" /> |
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| 39 | <field field_ref="N5_s" operation="average" /> |
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| 40 | <field field_ref="O3_c" operation="average" /> |
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| 41 | <field field_ref="O3_TA" operation="average" /> |
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| 42 | <field field_ref="O2_o" operation="average" /> |
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| 43 | <field field_ref="P1_c" operation="average" /> |
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| 44 | <field field_ref="P2_c" operation="average" /> |
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| 45 | <field field_ref="P3_c" operation="average" /> |
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| 46 | <field field_ref="P4_c" operation="average" /> |
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| 47 | <field field_ref="B1_c" operation="average" /> |
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| 48 | <field field_ref="Z4_c" operation="average" /> |
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| 49 | <field field_ref="Z5_c" operation="average" /> |
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| 50 | <field field_ref="Z6_c" operation="average" /> |
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| 51 | <field field_ref="R4_c" operation="average" /> |
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| 52 | <field field_ref="R6_c" operation="average" /> |
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| 53 | <field field_ref="R8_c" operation="average" /> |
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| 54 | <field field_ref="R1_c" operation="average" /> |
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| 55 | <field field_ref="R2_c" operation="average" /> |
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| 56 | <field field_ref="R3_c" operation="average" /> |
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| 57 | <field field_ref="L2_c" operation="average" /> |
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| 58 | <field field_ref="bL2_c" operation="average" /> |
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| 59 | <field field_ref="Q1_c" operation="average" /> |
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| 60 | <field field_ref="Q6_c" operation="average" /> |
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| 61 | <field field_ref="Q7_c" operation="average" /> |
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| 62 | <field field_ref="total_chlorophyll_calculator_result" name="Chl-a" long_name="Chlorophyll-a" operation="average" /> |
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| 63 | <field field_ref="light_EIR" operation="average" /> |
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| 64 | <field field_ref="light_ADY" operation="average" /> |
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| 65 | <field field_ref="toce" operation="average" /> |
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| 66 | <field field_ref="soce" operation="average" /> |
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| 67 | </field_group> |
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| 68 | </file> |
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| 69 | </file_group> |
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| 70 | |
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| 71 | <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files --> |
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| 72 | |
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| 73 | <file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE." > <!-- 5d files --> |
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| 74 | |
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| 75 | <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" > |
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| 76 | <field field_ref="e3t" /> |
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| 77 | <field field_ref="toce" name="thetao" operation="instant" freq_op="5d" > @toce_e3t / @e3t </field> |
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| 78 | <field field_ref="soce" name="so" operation="instant" freq_op="5d" > @soce_e3t / @e3t </field> |
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| 79 | <field field_ref="sst" name="tos" /> |
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| 80 | <field field_ref="sss" name="sos" /> |
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| 81 | <field field_ref="ssh" name="zos" /> |
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| 82 | <field field_ref="sst" name="tosstd" long_name="sea surface temperature standard deviation" operation="instant" freq_op="5d" > sqrt( @sst2 - @sst * @sst ) </field> |
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| 83 | <field field_ref="ssh" name="zosstd" long_name="sea surface height above geoid standard deviation" operation="instant" freq_op="5d" > sqrt( @ssh2 - @ssh * @ssh ) </field> |
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| 84 | <field field_ref="sst" name="sstdcy" long_name="amplitude of sst diurnal cycle" operation="average" freq_op="1d" > @sstmax - @sstmin </field> |
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| 85 | <field field_ref="mldkz5" /> |
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| 86 | <field field_ref="mldr10_1" /> |
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| 87 | <field field_ref="mldr10_1" name="mldr10_1dcy" long_name="amplitude of mldr10_1 diurnal cycle" operation="average" freq_op="1d" > @mldr10_1max - @mldr10_1min </field> |
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| 88 | <field field_ref="empmr" name="wfo" /> |
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| 89 | <field field_ref="qsr" name="rsntds" /> |
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| 90 | <field field_ref="qt" name="tohfls" /> |
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| 91 | <field field_ref="saltflx" name="sosflxdo" /> |
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| 92 | <field field_ref="taum" /> |
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| 93 | <field field_ref="wspd" name="sowindsp" /> |
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| 94 | <field field_ref="precip" name="soprecip" /> |
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| 95 | <field field_ref="sbt" /> |
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| 96 | </file> |
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| 97 | |
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| 98 | <file id="file3" name_suffix="_grid_U" description="ocean U grid variables" > |
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| 99 | <field field_ref="e3u" /> |
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| 100 | <field field_ref="ssu" name="uos" /> |
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| 101 | <field field_ref="uoce" name="uo" operation="instant" freq_op="5d" > @uoce_e3u / @e3u </field> |
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| 102 | <field field_ref="utau" name="tauuo" /> |
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| 103 | </file> |
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| 104 | |
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| 105 | <file id="file4" name_suffix="_grid_V" description="ocean V grid variables" > |
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| 106 | <field field_ref="e3v" /> |
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| 107 | <field field_ref="ssv" name="vos" /> |
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| 108 | <field field_ref="voce" name="vo" operation="instant" freq_op="5d" > @voce_e3v / @e3v </field> |
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| 109 | <field field_ref="vtau" name="tauvo" /> |
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| 110 | </file> |
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| 111 | |
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| 112 | <file id="file5" name_suffix="_grid_W" description="ocean W grid variables" > |
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| 113 | <field field_ref="e3w" /> |
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| 114 | <field field_ref="woce" name="wo" /> |
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| 115 | <field field_ref="avt" name="difvho" /> |
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| 116 | </file> |
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| 117 | |
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| 118 | <file id="file6" name_suffix="_icemod" description="ice variables" > |
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| 119 | <field field_ref="ice_pres" /> |
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| 120 | <field field_ref="snowthic_cea" name="snd" /> |
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| 121 | <field field_ref="icethic_cea" name="sit" /> |
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| 122 | <field field_ref="iceprod_cea" name="sip" /> |
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| 123 | <field field_ref="ist_ipa" /> |
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| 124 | <field field_ref="uice_ipa" /> |
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| 125 | <field field_ref="vice_ipa" /> |
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| 126 | <field field_ref="utau_ice" /> |
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| 127 | <field field_ref="vtau_ice" /> |
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| 128 | <field field_ref="qsr_io_cea" /> |
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| 129 | <field field_ref="qns_io_cea" /> |
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| 130 | <field field_ref="snowpre" /> |
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| 131 | </file> |
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| 132 | |
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| 133 | <file id="file7" name_suffix="_ptrc" description="tracer variables" > |
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| 134 | <field field_ref="N1_p" operation="average" /> |
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| 135 | <field field_ref="N3_n" operation="average" /> |
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| 136 | <field field_ref="N4_n" operation="average" /> |
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| 137 | <field field_ref="N5_s" operation="average" /> |
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| 138 | <field field_ref="O3_c" operation="average" /> |
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| 139 | <field field_ref="O3_TA" operation="average" /> |
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| 140 | <field field_ref="O2_o" operation="average" /> |
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| 141 | <field field_ref="P1_c" operation="average" /> |
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| 142 | <field field_ref="P2_c" operation="average" /> |
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| 143 | <field field_ref="P3_c" operation="average" /> |
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| 144 | <field field_ref="P4_c" operation="average" /> |
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| 145 | <field field_ref="B1_c" operation="average" /> |
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| 146 | <field field_ref="Z4_c" operation="average" /> |
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| 147 | <field field_ref="Z5_c" operation="average" /> |
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| 148 | <field field_ref="Z6_c" operation="average" /> |
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| 149 | <field field_ref="R4_c" operation="average" /> |
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| 150 | <field field_ref="R6_c" operation="average" /> |
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| 151 | <field field_ref="R8_c" operation="average" /> |
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| 152 | <field field_ref="R1_c" operation="average" /> |
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| 153 | <field field_ref="R2_c" operation="average" /> |
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| 154 | <field field_ref="R3_c" operation="average" /> |
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| 155 | <field field_ref="L2_c" operation="average" /> |
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| 156 | <field field_ref="bL2_c" operation="average" /> |
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| 157 | <field field_ref="Q1_c" operation="average" /> |
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| 158 | <field field_ref="Q6_c" operation="average" /> |
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| 159 | <field field_ref="Q7_c" operation="average" /> |
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| 160 | <field field_ref="total_chlorophyll_calculator_result" name="Chl-a" long_name="Chlorophyll-a" operation="average" /> |
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| 161 | <field field_ref="light_EIR" operation="average" /> |
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| 162 | <field field_ref="light_ADY" operation="average" /> |
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| 163 | <field field_ref="toce" operation="average" /> |
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| 164 | <field field_ref="soce" operation="average" /> |
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| 165 | </file> |
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| 166 | <!-- |
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| 167 | <file id="file8" name_suffix="_Tides" description="tidal harmonics" > |
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| 168 | <field field_ref="M2x" name="M2x" long_name="M2 Elevation harmonic real part" /> |
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| 169 | <field field_ref="M2y" name="M2y" long_name="M2 Elevation harmonic imaginary part" /> |
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| 170 | <field field_ref="M2x_u" name="M2x_u" long_name="M2 current barotrope along i-axis harmonic real part " /> |
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| 171 | <field field_ref="M2y_u" name="M2y_u" long_name="M2 current barotrope along i-axis harmonic imaginary part " /> |
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| 172 | <field field_ref="M2x_v" name="M2x_v" long_name="M2 current barotrope along j-axis harmonic real part " /> |
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| 173 | <field field_ref="M2y_v" name="M2y_v" long_name="M2 current barotrope along j-axis harmonic imaginary part " /> |
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| 174 | </file> |
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| 175 | --> |
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| 176 | |
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| 177 | </file_group> |
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| 178 | |
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| 179 | |
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| 180 | |
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| 181 | <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE." sync_freq="1m"> <!-- real monthly files --> |
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| 182 | <file id="file21" name_suffix="_grid_T" description="ocean T grid variables" > |
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| 183 | <field field_ref="e3t" /> |
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| 184 | <field field_ref="toce" name="thetao" long_name="sea_water_potential_temperature" operation="instant" freq_op="1d" > @toce_e3t / @e3t </field> |
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| 185 | <field field_ref="soce" name="so" long_name="sea_water_salinity" operation="instant" freq_op="1d" > @soce_e3t / @e3t </field> |
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| 186 | <field field_ref="sst" name="tos" long_name="sea_surface_temperature" /> |
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| 187 | <field field_ref="sss" name="sos" long_name="sea_surface_salinity" /> |
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| 188 | <field field_ref="ssh" name="zos" long_name="sea_surface_height_above_geoid" /> |
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| 189 | </file> |
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| 190 | |
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| 191 | <file id="file23" name_suffix="_grid_U" description="ocean U grid variables" > |
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| 192 | <field field_ref="e3u" /> |
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| 193 | <field field_ref="ssu" name="uos" long_name="sea_surface_x_velocity" /> |
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| 194 | <field field_ref="uoce" name="uo" long_name="sea_water_x_velocity" /> |
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| 195 | <field field_ref="utau" name="tauuo" long_name="surface_downward_x_stress" /> |
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| 196 | </file> |
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| 197 | |
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| 198 | <file id="file24" name_suffix="_grid_V" description="ocean V grid variables" > |
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| 199 | <field field_ref="e3v" /> |
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| 200 | <field field_ref="ssv" name="vos" long_name="sea_surface_y_velocity" /> |
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| 201 | <field field_ref="voce" name="vo" long_name="sea_water_y_velocity" /> |
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| 202 | <field field_ref="vtau" name="tauvo" long_name="surface_downward_y_stress" /> |
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| 203 | </file> |
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| 204 | |
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| 205 | <file id="file25" name_suffix="_grid_W" description="ocean W grid variables" > |
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| 206 | <field field_ref="e3w" /> |
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| 207 | <field field_ref="woce" name="wo" long_name="ocean vertical velocity" /> |
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| 208 | <field field_ref="avt" name="difvho" long_name="ocean_vertical_heat_diffusivity" /> |
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| 209 | </file> |
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| 210 | <file id="file26" name_suffix="_ptrc_T" description="ocean tracers" > |
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| 211 | <field field_ref="light_ADY" operation="average" /> |
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| 212 | <field field_ref="N1_p" operation="average" /> |
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| 213 | <field field_ref="N3_n" operation="average" /> |
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| 214 | <field field_ref="N4_n" operation="average" /> |
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| 215 | <field field_ref="N5_s" operation="average" /> |
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| 216 | <field field_ref="O3_c" operation="average" /> |
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| 217 | <field field_ref="O3_TA" operation="average" /> |
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| 218 | <field field_ref="O2_o" operation="average" /> |
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| 219 | <field field_ref="P1_Chl" operation="average" /> |
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| 220 | <field field_ref="P2_Chl" operation="average" /> |
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| 221 | <field field_ref="P3_Chl" operation="average" /> |
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| 222 | <field field_ref="P4_Chl" operation="average" /> |
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| 223 | <field field_ref="P1_c" operation="average" /> |
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| 224 | <field field_ref="P2_c" operation="average" /> |
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| 225 | <field field_ref="P3_c" operation="average" /> |
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| 226 | <field field_ref="P4_c" operation="average" /> |
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| 227 | <field field_ref="P1_n" operation="average" /> |
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| 228 | <field field_ref="P2_n" operation="average" /> |
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| 229 | <field field_ref="P3_n" operation="average" /> |
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| 230 | <field field_ref="P4_n" operation="average" /> |
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| 231 | <field field_ref="P1_p" operation="average" /> |
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| 232 | <field field_ref="P2_p" operation="average" /> |
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| 233 | <field field_ref="P3_p" operation="average" /> |
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| 234 | <field field_ref="P4_p" operation="average" /> |
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| 235 | <field field_ref="P1_s" operation="average" /> |
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| 236 | <field field_ref="B1_c" operation="average" /> |
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| 237 | <field field_ref="B1_n" operation="average" /> |
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| 238 | <field field_ref="B1_p" operation="average" /> |
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| 239 | <field field_ref="Z4_c" operation="average" /> |
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| 240 | <field field_ref="Z5_c" operation="average" /> |
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| 241 | <field field_ref="Z5_n" operation="average" /> |
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| 242 | <field field_ref="Z5_p" operation="average" /> |
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| 243 | <field field_ref="Z6_c" operation="average" /> |
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| 244 | <field field_ref="Z6_n" operation="average" /> |
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| 245 | <field field_ref="Z6_p" operation="average" /> |
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| 246 | <field field_ref="R4_c" operation="average" /> |
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| 247 | <field field_ref="R4_n" operation="average" /> |
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| 248 | <field field_ref="R4_p" operation="average" /> |
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| 249 | <field field_ref="R6_c" operation="average" /> |
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| 250 | <field field_ref="R6_n" operation="average" /> |
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| 251 | <field field_ref="R6_p" operation="average" /> |
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| 252 | <field field_ref="R6_s" operation="average" /> |
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| 253 | <field field_ref="R8_c" operation="average" /> |
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| 254 | <field field_ref="R8_n" operation="average" /> |
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| 255 | <field field_ref="R8_p" operation="average" /> |
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| 256 | <field field_ref="R8_s" operation="average" /> |
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| 257 | <field field_ref="R1_c" operation="average" /> |
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| 258 | <field field_ref="R1_n" operation="average" /> |
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| 259 | <field field_ref="R1_p" operation="average" /> |
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| 260 | <field field_ref="R2_c" operation="average" /> |
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| 261 | <field field_ref="R3_c" operation="average" /> |
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| 262 | <field field_ref="L2_c" operation="average" /> |
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| 263 | <field field_ref="bL2_c" operation="average" /> |
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| 264 | <field field_ref="Q1_c" operation="average" /> |
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| 265 | <field field_ref="Q1_n" operation="average" /> |
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| 266 | <field field_ref="Q1_p" operation="average" /> |
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| 267 | <field field_ref="Q6_c" operation="average" /> |
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| 268 | <field field_ref="Q6_n" operation="average" /> |
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| 269 | <field field_ref="Q6_p" operation="average" /> |
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| 270 | <field field_ref="Q6_s" operation="average" /> |
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| 271 | <field field_ref="Q7_c" operation="average" /> |
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| 272 | <field field_ref="Q7_n" operation="average" /> |
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| 273 | <field field_ref="Q7_p" operation="average" /> |
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| 274 | <field field_ref="PON_result" unit="mmol N/m^3" operation="average" /> |
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| 275 | <field field_ref="POP_result" unit="mmol P/m^3" operation="average" /> |
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| 276 | <field field_ref="POSi_result" unit="mmol Si/m^3" operation="average" /> |
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| 277 | <field field_ref="O3_Om_cal" operation="average" /> |
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| 278 | <field field_ref="ben_PON_result" unit="mmol N/m^2" operation="average" /> |
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| 279 | <field field_ref="ben_POP_result" unit="mmol P/m^2" operation="average" /> |
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| 280 | <field field_ref="phytoplankton_uptake_oxN_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_uptake_oxN_result_e3t / @e3t </field> |
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| 281 | <field field_ref="phytoplankton_uptake_redN_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_uptake_redN_result_e3t / @e3t </field> |
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| 282 | <field field_ref="phytoplankton_uptake_DIP_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_uptake_DIP_result_e3t / @e3t </field> |
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| 283 | <field field_ref="P1_fN5PIs" name="phytoplankton_uptake_DIS_result" operation="instant" freq_op="1mo"> @P1_fN5PIs_e3t / @e3t </field> |
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| 284 | <field field_ref="phytoplankton_loss_to_labile_DOC_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_labile_DOC_result_e3t / @e3t </field> |
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| 285 | <field field_ref="phytoplankton_loss_to_labile_DON_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_labile_DON_result_e3t / @e3t </field> |
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| 286 | <field field_ref="phytoplankton_loss_to_labile_DOP_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_labile_DOP_result_e3t / @e3t </field> |
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| 287 | <field field_ref="phytoplankton_loss_to_non_labile_DOC_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_non_labile_DOC_result_e3t / @e3t </field> |
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| 288 | <field field_ref="phytoplankton_loss_to_POC_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_POC_result_e3t / @e3t </field> |
|---|
| 289 | <field field_ref="phytoplankton_loss_to_PON_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_PON_result_e3t / @e3t </field> |
|---|
| 290 | <field field_ref="phytoplankton_loss_to_POP_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @phytoplankton_loss_to_POP_result_e3t / @e3t </field> |
|---|
| 291 | <field field_ref="P1_fPIRPs" name="diatom_loss_to_POSi_result" unit="mmol Si/m^3/d" operation="instant" freq_op="1mo"> @P1_fPIRPs_e3t / @e3t </field> |
|---|
| 292 | <field field_ref="B1_fB1O3c" operation="instant" freq_op="1mo"> @B1_fB1O3c_e3t / @e3t </field> |
|---|
| 293 | <field field_ref="B1_fR1B1c" operation="instant" freq_op="1mo"> @B1_fR1B1c_e3t / @e3t </field> |
|---|
| 294 | <field field_ref="B1_fR1B1n" operation="instant" freq_op="1mo"> @B1_fR1B1n_e3t / @e3t </field> |
|---|
| 295 | <field field_ref="B1_fR1B1p" operation="instant" freq_op="1mo"> @B1_fR1B1p_e3t / @e3t </field> |
|---|
| 296 | <field field_ref="B1_fR2B1c" operation="instant" freq_op="1mo"> @B1_fR2B1c_e3t / @e3t </field> |
|---|
| 297 | <field field_ref="B1_fR3B1c" operation="instant" freq_op="1mo"> @B1_fR3B1c_e3t / @e3t </field> |
|---|
| 298 | <field field_ref="B1_fB1R1c" operation="instant" freq_op="1mo"> @B1_fB1R1c_e3t / @e3t </field> |
|---|
| 299 | <field field_ref="B1_fB1R1n" operation="instant" freq_op="1mo"> @B1_fB1R1n_e3t / @e3t </field> |
|---|
| 300 | <field field_ref="B1_fB1R1p" operation="instant" freq_op="1mo"> @B1_fB1R1p_e3t / @e3t </field> |
|---|
| 301 | <field field_ref="B1_fB1R2c" operation="instant" freq_op="1mo"> @B1_fB1R2c_e3t / @e3t </field> |
|---|
| 302 | <field field_ref="B1_fB1R3c" operation="instant" freq_op="1mo"> @B1_fB1R3c_e3t / @e3t </field> |
|---|
| 303 | <field field_ref="B1_fB1NIn" operation="instant" freq_op="1mo"> @B1_fB1NIn_e3t / @e3t </field> |
|---|
| 304 | <field field_ref="B1_fB1N1p" operation="instant" freq_op="1mo"> @B1_fB1N1p_e3t / @e3t </field> |
|---|
| 305 | <field field_ref="Z4_fZIO3c" operation="instant" freq_op="1mo"> @Z4_fZIO3c_e3t / @e3t </field> |
|---|
| 306 | <field field_ref="Z4_fZIRPc" operation="instant" freq_op="1mo"> @Z4_fZIRPc_e3t / @e3t </field> |
|---|
| 307 | <field field_ref="Z4_fZIRPn" operation="instant" freq_op="1mo"> @Z4_fZIRPn_e3t / @e3t </field> |
|---|
| 308 | <field field_ref="Z4_fZIRPp" operation="instant" freq_op="1mo"> @Z4_fZIRPp_e3t / @e3t </field> |
|---|
| 309 | <field field_ref="Z4_fZIRDc" operation="instant" freq_op="1mo"> @Z4_fZIRDc_e3t / @e3t </field> |
|---|
| 310 | <field field_ref="Z4_fZIRDn" operation="instant" freq_op="1mo"> @Z4_fZIRDn_e3t / @e3t </field> |
|---|
| 311 | <field field_ref="Z4_fZIRDp" operation="instant" freq_op="1mo"> @Z4_fZIRDp_e3t / @e3t </field> |
|---|
| 312 | <field field_ref="Z4_fZINIn" operation="instant" freq_op="1mo"> @Z4_fZINIn_e3t / @e3t </field> |
|---|
| 313 | <field field_ref="Z4_fZINIp" operation="instant" freq_op="1mo"> @Z4_fZINIp_e3t / @e3t </field> |
|---|
| 314 | <field field_ref="Z4_fphytoc_result" operation="instant" unit="mg C/m^3/d" freq_op="1mo"> @Z4_fphytoc_result_e3t / @e3t </field> |
|---|
| 315 | <field field_ref="Z4_fphyton_result" operation="instant" unit="mmol N/m^3/d" freq_op="1mo"> @Z4_fphyton_result_e3t / @e3t </field> |
|---|
| 316 | <field field_ref="Z4_fphytop_result" operation="instant" unit="mmol P/m^3/d" freq_op="1mo"> @Z4_fphytop_result_e3t / @e3t </field> |
|---|
| 317 | <field field_ref="Z4_fprey1s" name="Z4_fphytos_result" long_name="mesozooplankton grazing of diatom silicon" operation="instant" freq_op="1mo"> @Z4_fprey1s_e3t / @e3t </field> |
|---|
| 318 | <field field_ref="Z4_fzooc_result" operation="instant" unit="mg C/m^3/d" freq_op="1mo"> @Z4_fzooc_result_e3t / @e3t </field> |
|---|
| 319 | <field field_ref="Z4_fzoon_result" operation="instant" unit="mmol N/m^3/d" freq_op="1mo"> @Z4_fzoon_result_e3t / @e3t </field> |
|---|
| 320 | <field field_ref="Z4_fzoop_result" operation="instant" unit="mmol P/m^3/d" freq_op="1mo"> @Z4_fzoop_result_e3t / @e3t </field> |
|---|
| 321 | <field field_ref="Z4_fprey9c" name="Z4_fdetrc_result" long_name="mesozooplankton scavenging of particulate organic carbon" operation="instant" freq_op="1mo"> @Z4_fprey9c_e3t / @e3t </field> |
|---|
| 322 | <field field_ref="Z4_fprey9n" name="Z4_fdetrn_result" long_name="mesozooplankton scavenging of particulate organic nitrogen" operation="instant" freq_op="1mo"> @Z4_fprey9n_e3t / @e3t </field> |
|---|
| 323 | <field field_ref="Z4_fprey9p" name="Z4_fdetrp_result" long_name="mesozooplankton scavenging of particulate organic phosphorus" operation="instant" freq_op="1mo"> @Z4_fprey9p_e3t / @e3t </field> |
|---|
| 324 | <field field_ref="Z4_fprey9s" name="Z4_fdetrs_result" long_name="mesozooplankton scavenging of particulate organic silicon" operation="instant" freq_op="1mo"> @Z4_fprey9s_e3t / @e3t </field> |
|---|
| 325 | <field field_ref="total_microzooplankton_respiration_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_respiration_result_e3t / @e3t </field> |
|---|
| 326 | <field field_ref="total_microzooplankton_loss_to_POC_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_POC_result_e3t / @e3t </field> |
|---|
| 327 | <field field_ref="total_microzooplankton_loss_to_PON_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_PON_result_e3t / @e3t </field> |
|---|
| 328 | <field field_ref="total_microzooplankton_loss_to_POP_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_POP_result_e3t / @e3t </field> |
|---|
| 329 | <field field_ref="total_microzooplankton_loss_to_DOC_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_DOC_result_e3t / @e3t </field> |
|---|
| 330 | <field field_ref="total_microzooplankton_loss_to_DON_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_DON_result_e3t / @e3t </field> |
|---|
| 331 | <field field_ref="total_microzooplankton_loss_to_DOP_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_DOP_result_e3t / @e3t </field> |
|---|
| 332 | <field field_ref="total_microzooplankton_loss_to_DIN_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_DIN_result_e3t / @e3t </field> |
|---|
| 333 | <field field_ref="total_microzooplankton_loss_to_DIP_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @total_microzooplankton_loss_to_DIP_result_e3t / @e3t </field> |
|---|
| 334 | <field field_ref="Z5_fphytoc_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @Z5_fphytoc_result_e3t / @e3t </field> |
|---|
| 335 | <field field_ref="Z5_fphyton_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @Z5_fphyton_result_e3t / @e3t </field> |
|---|
| 336 | <field field_ref="Z5_fphytop_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @Z5_fphytop_result_e3t / @e3t </field> |
|---|
| 337 | <field field_ref="Z5_fprey2s" name="Z5_fphytos_result" long_name="mesozooplankton grazing of diatom silicon" operation="instant" freq_op="1mo"> @Z5_fprey2s_e3t / @e3t </field> |
|---|
| 338 | <field field_ref="Z5_fprey1c" name="Z5_fbacc_result" long_name="mesozooplankton predation of bacteria carbon" operation="instant" freq_op="1mo"> @Z5_fprey1c_e3t / @e3t </field> |
|---|
| 339 | <field field_ref="Z5_fprey1n" name="Z5_fbacn_result" long_name="mesozooplankton predation of bacteria nitrogen" operation="instant" freq_op="1mo"> @Z5_fprey1n_e3t / @e3t </field> |
|---|
| 340 | <field field_ref="Z5_fprey1p" name="Z5_fbacp_result" long_name="mesozooplankton predation of bacteria phosphorus" operation="instant" freq_op="1mo"> @Z5_fprey1p_e3t / @e3t </field> |
|---|
| 341 | <field field_ref="Z5_fzooc_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @Z5_fzooc_result_e3t / @e3t </field> |
|---|
| 342 | <field field_ref="Z5_fzoon_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @Z5_fzoon_result_e3t / @e3t </field> |
|---|
| 343 | <field field_ref="Z5_fzoop_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @Z5_fzoop_result_e3t / @e3t </field> |
|---|
| 344 | <field field_ref="Z6_fphytoc_result" unit="mg C/m^3/d" operation="instant" freq_op="1mo"> @Z6_fphytoc_result_e3t / @e3t </field> |
|---|
| 345 | <field field_ref="Z6_fphyton_result" unit="mmol N/m^3/d" operation="instant" freq_op="1mo"> @Z6_fphyton_result_e3t / @e3t </field> |
|---|
| 346 | <field field_ref="Z6_fphytop_result" unit="mmol P/m^3/d" operation="instant" freq_op="1mo"> @Z6_fphytop_result_e3t / @e3t </field> |
|---|
| 347 | <field field_ref="Z6_fprey1c" name="Z6_fbacc_result" long_name="heterotrophic flagellate predation of bacteria carbon" operation="instant" freq_op="1mo"> @Z6_fprey1c_e3t / @e3t </field> |
|---|
| 348 | <field field_ref="Z6_fprey1n" name="Z6_fbacn_result" long_name="heterotrophic flagellate predation of bacteria nitrogen" operation="instant" freq_op="1mo"> @Z6_fprey1n_e3t / @e3t </field> |
|---|
| 349 | <field field_ref="Z6_fprey1p" name="Z6_fbacp_result" long_name="heterotrophic flagellate predation of bacteria phosphorus" operation="instant" freq_op="1mo"> @Z6_fprey1p_e3t / @e3t </field> |
|---|
| 350 | <field field_ref="Z6_fprey4c" name="Z6_fzooc_result" long_name="heterotrophic flagellate predation of zooplankton carbon" operation="instant" freq_op="1mo"> @Z6_fprey4c_e3t / @e3t </field> |
|---|
| 351 | <field field_ref="Z6_fprey4n" name="Z6_fzoon_result" long_name="heterotrophic flagellate predation of zooplankton nitrogen" operation="instant" freq_op="1mo"> @Z6_fprey4n_e3t / @e3t </field> |
|---|
| 352 | <field field_ref="Z6_fprey4p" name="Z6_fzoop_result" long_name="heterotrophic flagellate predation of zooplankton phosphorus" operation="instant" freq_op="1mo"> @Z6_fprey4p_e3t / @e3t </field> |
|---|
| 353 | <field field_ref="pel_nit_rate" operation="instant" freq_op="1mo"> @pel_nit_rate_e3t / @e3t </field> |
|---|
| 354 | <field field_ref="O2_fair" operation="average" /> |
|---|
| 355 | <field field_ref="net_PelBen_PON_result" unit="mmol N/m^2/d" operation="average" /> |
|---|
| 356 | <field field_ref="net_PelBen_POP_result" unit="mmol P/m^2/d" operation="average" /> |
|---|
| 357 | <field field_ref="net_PelBen_POSi_result" unit="mmol Si/m^2/d" operation="average" /> |
|---|
| 358 | <field field_ref="e3t" operation="average" /> |
|---|
| 359 | </file> |
|---|
| 360 | |
|---|
| 361 | <!-- <file id="file52" name_suffix="_diad_T" description="tracer variables" > |
|---|
| 362 | <field field_ref="photosynthesis_rate_calculator_result" operation="average" /> |
|---|
| 363 | <field field_ref="total_carbon" operation="instant" /> |
|---|
| 364 | <field field_ref="total_nitrogen" operation="instant" /> |
|---|
| 365 | <field field_ref="total_phosphorus" operation="instant" /> |
|---|
| 366 | <field field_ref="total_silicate" operation="instant" /> |
|---|
| 367 | </file>--> |
|---|
| 368 | |
|---|
| 369 | </file_group> |
|---|
| 370 | |
|---|
| 371 | <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files --> |
|---|
| 372 | <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files --> |
|---|
| 373 | <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files --> |
|---|
| 374 | <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files --> |
|---|
| 375 | |
|---|
| 376 | <file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files --> |
|---|
| 377 | <file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files --> |
|---|
| 378 | <file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files --> |
|---|
| 379 | <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files --> |
|---|
| 380 | |
|---|
| 381 | </file_definition> |
|---|
| 382 | |
|---|
| 383 | <!-- |
|---|
| 384 | ============================================================================================================ |
|---|
| 385 | = grid definition = = DO NOT CHANGE = |
|---|
| 386 | ============================================================================================================ |
|---|
| 387 | --> |
|---|
| 388 | |
|---|
| 389 | <axis_definition> |
|---|
| 390 | <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" /> |
|---|
| 391 | <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" /> |
|---|
| 392 | <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" /> |
|---|
| 393 | <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" /> |
|---|
| 394 | <axis id="nfloat" long_name="Float number" unit="-" /> |
|---|
| 395 | <axis id="icbcla" long_name="Iceberg class" unit="-" /> |
|---|
| 396 | </axis_definition> |
|---|
| 397 | |
|---|
| 398 | <domain_definition src="./domain_def.xml"/> |
|---|
| 399 | |
|---|
| 400 | <grid_definition> |
|---|
| 401 | <grid id="grid_T_2D" domain_ref="grid_T"/> |
|---|
| 402 | <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/> |
|---|
| 403 | <grid id="grid_U_2D" domain_ref="grid_U"/> |
|---|
| 404 | <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/> |
|---|
| 405 | <grid id="grid_V_2D" domain_ref="grid_V"/> |
|---|
| 406 | <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/> |
|---|
| 407 | <grid id="grid_W_2D" domain_ref="grid_W"/> |
|---|
| 408 | <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/> |
|---|
| 409 | </grid_definition> |
|---|
| 410 | </context> |
|---|
| 411 | |
|---|
| 412 | <context id="xios"> |
|---|
| 413 | |
|---|
| 414 | <variable_definition> |
|---|
| 415 | |
|---|
| 416 | <!-- |
|---|
| 417 | We must have buffer_size > jpi*jpj*jpk*8 (with jpi and jpj the subdomain size) |
|---|
| 418 | --> |
|---|
| 419 | <variable id="buffer_size" type="integer">50000000</variable> |
|---|
| 420 | <variable id="buffer_server_factor_size" type="integer">2</variable> |
|---|
| 421 | <variable id="info_level" type="integer">0</variable> |
|---|
| 422 | <variable id="using_server" type="boolean">true</variable> |
|---|
| 423 | <variable id="using_oasis" type="boolean">false</variable> |
|---|
| 424 | <variable id="oasis_codes_id" type="string" >oceanx</variable> |
|---|
| 425 | |
|---|
| 426 | </variable_definition> |
|---|
| 427 | |
|---|
| 428 | </context> |
|---|
| 429 | |
|---|
| 430 | </simulation> |
|---|
