| 1 | MODULE nemogcm |
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| 2 | !!====================================================================== |
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| 3 | !! *** MODULE nemogcm *** |
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| 4 | !! Ocean system : NEMO GCM (ocean dynamics, on-line tracers, biochemistry and sea-ice) |
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| 5 | !!====================================================================== |
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| 6 | !! History : OPA ! 1990-10 (C. Levy, G. Madec) Original code |
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| 7 | !! 7.0 ! 1991-11 (M. Imbard, C. Levy, G. Madec) |
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| 8 | !! 7.1 ! 1993-03 (M. Imbard, C. Levy, G. Madec, O. Marti, M. Guyon, A. Lazar, |
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| 9 | !! P. Delecluse, C. Perigaud, G. Caniaux, B. Colot, C. Maes) release 7.1 |
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| 10 | !! - ! 1992-06 (L.Terray) coupling implementation |
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| 11 | !! - ! 1993-11 (M.A. Filiberti) IGLOO sea-ice |
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| 12 | !! 8.0 ! 1996-03 (M. Imbard, C. Levy, G. Madec, O. Marti, M. Guyon, A. Lazar, |
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| 13 | !! P. Delecluse, L.Terray, M.A. Filiberti, J. Vialar, A.M. Treguier, M. Levy) release 8.0 |
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| 14 | !! 8.1 ! 1997-06 (M. Imbard, G. Madec) |
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| 15 | !! 8.2 ! 1999-11 (M. Imbard, H. Goosse) sea-ice model |
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| 16 | !! ! 1999-12 (V. Thierry, A-M. Treguier, M. Imbard, M-A. Foujols) OPEN-MP |
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| 17 | !! ! 2000-07 (J-M Molines, M. Imbard) Open Boundary Conditions (CLIPPER) |
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| 18 | !! NEMO 1.0 ! 2002-08 (G. Madec) F90: Free form and modules |
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| 19 | !! - ! 2004-06 (R. Redler, NEC CCRLE, Germany) add OASIS[3/4] coupled interfaces |
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| 20 | !! - ! 2004-08 (C. Talandier) New trends organization |
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| 21 | !! - ! 2005-06 (C. Ethe) Add the 1D configuration possibility |
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| 22 | !! - ! 2005-11 (V. Garnier) Surface pressure gradient organization |
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| 23 | !! - ! 2006-03 (L. Debreu, C. Mazauric) Agrif implementation |
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| 24 | !! - ! 2006-04 (G. Madec, R. Benshila) Step reorganization |
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| 25 | !! - ! 2007-07 (J. Chanut, A. Sellar) Unstructured open boundaries (BDY) |
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| 26 | !! 3.2 ! 2009-08 (S. Masson) open/write in the listing file in mpp |
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| 27 | !! 3.3 ! 2010-05 (K. Mogensen, A. Weaver, M. Martin, D. Lea) Assimilation interface |
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| 28 | !! - ! 2010-10 (C. Ethe, G. Madec) reorganisation of initialisation phase |
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| 29 | !! 3.3.1! 2011-01 (A. R. Porter, STFC Daresbury) dynamical allocation |
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| 30 | !! - ! 2011-11 (C. Harris) decomposition changes for running with CICE |
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| 31 | !! 3.6 ! 2012-05 (C. Calone, J. Simeon, G. Madec, C. Ethe) Add grid coarsening |
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| 32 | !! - ! 2014-12 (G. Madec) remove KPP scheme and cross-land advection (cla) |
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| 33 | !! 4.0 ! 2016-10 (G. Madec, S. Flavoni) domain configuration / user defined interface |
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| 34 | !!---------------------------------------------------------------------- |
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| 35 | |
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| 36 | !!---------------------------------------------------------------------- |
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| 37 | !! nemo_gcm : solve ocean dynamics, tracer, biogeochemistry and/or sea-ice |
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| 38 | !! nemo_init : initialization of the NEMO system |
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| 39 | !! nemo_ctl : initialisation of the contol print |
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| 40 | !! nemo_closefile: close remaining open files |
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| 41 | !! nemo_alloc : dynamical allocation |
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| 42 | !!---------------------------------------------------------------------- |
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| 43 | USE step_oce ! module used in the ocean time stepping module (step.F90) |
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| 44 | USE phycst ! physical constant (par_cst routine) |
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| 45 | USE domain ! domain initialization (dom_init & dom_cfg routines) |
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| 46 | USE closea ! treatment of closed seas (for ln_closea) |
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| 47 | USE usrdef_nam ! user defined configuration |
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| 48 | USE tideini ! tidal components initialization (tide_ini routine) |
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| 49 | USE bdy_oce, ONLY : ln_bdy |
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| 50 | USE bdyini ! open boundary cond. setting (bdy_init routine) |
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| 51 | USE istate ! initial state setting (istate_init routine) |
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| 52 | USE ldfdyn ! lateral viscosity setting (ldfdyn_init routine) |
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| 53 | USE ldftra ! lateral diffusivity setting (ldftra_init routine) |
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| 54 | USE trdini ! dyn/tra trends initialization (trd_init routine) |
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| 55 | USE asminc ! assimilation increments |
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| 56 | USE asmbkg ! writing out state trajectory |
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| 57 | USE diaptr ! poleward transports (dia_ptr_init routine) |
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| 58 | USE diadct ! sections transports (dia_dct_init routine) |
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| 59 | USE diaobs ! Observation diagnostics (dia_obs_init routine) |
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| 60 | USE diacfl ! CFL diagnostics (dia_cfl_init routine) |
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| 61 | USE step ! NEMO time-stepping (stp routine) |
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| 62 | USE icbini ! handle bergs, initialisation |
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| 63 | USE icbstp ! handle bergs, calving, themodynamics and transport |
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| 64 | USE cpl_oasis3 ! OASIS3 coupling |
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| 65 | USE c1d ! 1D configuration |
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| 66 | USE step_c1d ! Time stepping loop for the 1D configuration |
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| 67 | USE dyndmp ! Momentum damping |
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| 68 | USE stopar ! Stochastic param.: ??? |
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| 69 | USE stopts ! Stochastic param.: ??? |
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| 70 | USE diurnal_bulk ! diurnal bulk SST |
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| 71 | USE step_diu ! diurnal bulk SST timestepping (called from here if run offline) |
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| 72 | USE crsini ! initialise grid coarsening utility |
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| 73 | USE diatmb ! Top,middle,bottom output |
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| 74 | USE dia25h ! 25h mean output |
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| 75 | USE sbc_oce , ONLY : lk_oasis |
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| 76 | USE wet_dry ! Wetting and drying setting (wad_init routine) |
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| 77 | #if defined key_top |
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| 78 | USE trcini ! passive tracer initialisation |
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| 79 | #endif |
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| 80 | #if defined key_nemocice_decomp |
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| 81 | USE ice_domain_size, only: nx_global, ny_global |
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| 82 | #endif |
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| 83 | ! |
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| 84 | USE lib_mpp ! distributed memory computing |
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| 85 | USE mppini ! shared/distributed memory setting (mpp_init routine) |
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| 86 | USE lbcnfd , ONLY : isendto, nsndto, nfsloop, nfeloop ! Setup of north fold exchanges |
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| 87 | USE lib_fortran ! Fortran utilities (allows no signed zero when 'key_nosignedzero' defined) |
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| 88 | #if defined key_iomput |
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| 89 | USE xios ! xIOserver |
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| 90 | #endif |
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| 91 | #if defined key_agrif |
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| 92 | USE agrif_all_update ! Master Agrif update |
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| 93 | #endif |
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| 94 | USE scoce, ONLY : scoce_alloc ! scratch arrays |
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| 95 | |
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| 96 | IMPLICIT NONE |
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| 97 | PRIVATE |
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| 98 | |
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| 99 | PUBLIC nemo_gcm ! called by model.F90 |
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| 100 | PUBLIC nemo_init ! needed by AGRIF |
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| 101 | PUBLIC nemo_alloc ! needed by TAM |
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| 102 | |
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| 103 | CHARACTER(lc) :: cform_aaa="( /, 'AAAAAAAA', / ) " ! flag for output listing |
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| 104 | |
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| 105 | !!---------------------------------------------------------------------- |
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| 106 | !! NEMO/OCE 4.0 , NEMO Consortium (2018) |
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| 107 | !! $Id$ |
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| 108 | !! Software governed by the CeCILL license (see ./LICENSE) |
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| 109 | !!---------------------------------------------------------------------- |
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| 110 | CONTAINS |
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| 111 | |
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| 112 | SUBROUTINE nemo_gcm |
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| 113 | !!---------------------------------------------------------------------- |
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| 114 | !! *** ROUTINE nemo_gcm *** |
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| 115 | !! |
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| 116 | !! ** Purpose : NEMO solves the primitive equations on an orthogonal |
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| 117 | !! curvilinear mesh on the sphere. |
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| 118 | !! |
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| 119 | !! ** Method : - model general initialization |
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| 120 | !! - launch the time-stepping (stp routine) |
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| 121 | !! - finalize the run by closing files and communications |
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| 122 | !! |
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| 123 | !! References : Madec, Delecluse, Imbard, and Levy, 1997: internal report, IPSL. |
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| 124 | !! Madec, 2008, internal report, IPSL. |
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| 125 | !!---------------------------------------------------------------------- |
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| 126 | INTEGER :: istp ! time step index |
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| 127 | !!---------------------------------------------------------------------- |
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| 128 | ! |
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| 129 | #if defined key_agrif |
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| 130 | CALL Agrif_Init_Grids() ! AGRIF: set the meshes |
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| 131 | #endif |
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| 132 | ! !-----------------------! |
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| 133 | CALL nemo_init !== Initialisations ==! |
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| 134 | ! !-----------------------! |
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| 135 | #if defined key_agrif |
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| 136 | CALL Agrif_Declare_Var_dom ! AGRIF: set the meshes for DOM |
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| 137 | CALL Agrif_Declare_Var ! " " " " " DYN/TRA |
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| 138 | # if defined key_top |
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| 139 | CALL Agrif_Declare_Var_top ! " " " " " TOP |
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| 140 | # endif |
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| 141 | # if defined key_si3 |
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| 142 | CALL Agrif_Declare_Var_ice ! " " " " " Sea ice |
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| 143 | # endif |
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| 144 | #endif |
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| 145 | ! check that all process are still there... If some process have an error, |
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| 146 | ! they will never enter in step and other processes will wait until the end of the cpu time! |
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| 147 | IF( lk_mpp ) CALL mpp_max( nstop ) |
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| 148 | |
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| 149 | IF(lwp) WRITE(numout,cform_aaa) ! Flag AAAAAAA |
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| 150 | |
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| 151 | ! !-----------------------! |
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| 152 | ! !== time stepping ==! |
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| 153 | ! !-----------------------! |
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| 154 | istp = nit000 |
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| 155 | ! |
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| 156 | #if defined key_c1d |
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| 157 | DO WHILE ( istp <= nitend .AND. nstop == 0 ) !== C1D time-stepping ==! |
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| 158 | CALL stp_c1d( istp ) |
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| 159 | istp = istp + 1 |
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| 160 | END DO |
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| 161 | #else |
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| 162 | ! |
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| 163 | # if defined key_agrif |
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| 164 | ! !== AGRIF time-stepping ==! |
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| 165 | CALL Agrif_Regrid() |
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| 166 | ! |
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| 167 | ! Recursive update from highest nested level to lowest: |
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| 168 | CALL Agrif_step_child_adj(Agrif_Update_All) |
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| 169 | ! |
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| 170 | DO WHILE( istp <= nitend .AND. nstop == 0 ) |
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| 171 | CALL stp |
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| 172 | istp = istp + 1 |
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| 173 | END DO |
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| 174 | ! |
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| 175 | IF( .NOT. Agrif_Root() ) THEN |
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| 176 | CALL Agrif_ParentGrid_To_ChildGrid() |
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| 177 | IF( ln_diaobs ) CALL dia_obs_wri |
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| 178 | IF( ln_timing ) CALL timing_finalize |
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| 179 | CALL Agrif_ChildGrid_To_ParentGrid() |
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| 180 | ENDIF |
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| 181 | ! |
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| 182 | # else |
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| 183 | ! |
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| 184 | IF( .NOT.ln_diurnal_only ) THEN !== Standard time-stepping ==! |
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| 185 | ! |
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| 186 | DO WHILE( istp <= nitend .AND. nstop == 0 ) |
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| 187 | CALL stp ( istp ) |
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| 188 | istp = istp + 1 |
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| 189 | END DO |
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| 190 | ! |
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| 191 | ELSE !== diurnal SST time-steeping only ==! |
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| 192 | ! |
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| 193 | DO WHILE( istp <= nitend .AND. nstop == 0 ) |
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| 194 | CALL stp_diurnal( istp ) ! time step only the diurnal SST |
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| 195 | istp = istp + 1 |
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| 196 | END DO |
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| 197 | ! |
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| 198 | ENDIF |
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| 199 | ! |
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| 200 | # endif |
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| 201 | ! |
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| 202 | #endif |
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| 203 | ! |
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| 204 | IF( ln_diaobs ) CALL dia_obs_wri |
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| 205 | ! |
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| 206 | IF( ln_icebergs ) CALL icb_end( nitend ) |
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| 207 | |
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| 208 | ! !------------------------! |
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| 209 | ! !== finalize the run ==! |
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| 210 | ! !------------------------! |
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| 211 | IF(lwp) WRITE(numout,cform_aaa) ! Flag AAAAAAA |
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| 212 | ! |
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| 213 | IF( nstop /= 0 .AND. lwp ) THEN ! error print |
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| 214 | WRITE(numout,cform_err) |
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| 215 | WRITE(numout,*) ' ==>>> nemo_gcm: a total of ', nstop, ' errors have been found' |
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| 216 | WRITE(numout,*) |
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| 217 | ENDIF |
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| 218 | ! |
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| 219 | IF( ln_timing ) CALL timing_finalize |
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| 220 | ! |
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| 221 | CALL nemo_closefile |
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| 222 | ! |
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| 223 | #if defined key_iomput |
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| 224 | CALL xios_finalize ! end mpp communications with xios |
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| 225 | IF( lk_oasis ) CALL cpl_finalize ! end coupling and mpp communications with OASIS |
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| 226 | #else |
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| 227 | IF ( lk_oasis ) THEN ; CALL cpl_finalize ! end coupling and mpp communications with OASIS |
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| 228 | ELSEIF( lk_mpp ) THEN ; CALL mppstop ! end mpp communications |
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| 229 | ENDIF |
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| 230 | #endif |
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| 231 | ! |
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| 232 | END SUBROUTINE nemo_gcm |
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| 233 | |
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| 234 | |
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| 235 | SUBROUTINE nemo_init |
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| 236 | !!---------------------------------------------------------------------- |
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| 237 | !! *** ROUTINE nemo_init *** |
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| 238 | !! |
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| 239 | !! ** Purpose : initialization of the NEMO GCM |
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| 240 | !!---------------------------------------------------------------------- |
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| 241 | INTEGER :: ji ! dummy loop indices |
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| 242 | INTEGER :: ios, ilocal_comm ! local integers |
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| 243 | CHARACTER(len=120), DIMENSION(60) :: cltxt, cltxt2, clnam |
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| 244 | !! |
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| 245 | NAMELIST/namctl/ ln_ctl , nn_print, nn_ictls, nn_ictle, & |
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| 246 | & nn_isplt , nn_jsplt, nn_jctls, nn_jctle, & |
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| 247 | & ln_timing, ln_diacfl |
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| 248 | NAMELIST/namcfg/ ln_read_cfg, cn_domcfg, ln_closea, ln_write_cfg, cn_domcfg_out, ln_use_jattr |
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| 249 | !!---------------------------------------------------------------------- |
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| 250 | ! |
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| 251 | cltxt = '' |
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| 252 | cltxt2 = '' |
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| 253 | clnam = '' |
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| 254 | cxios_context = 'nemo' |
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| 255 | ! |
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| 256 | ! ! Open reference namelist and configuration namelist files |
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| 257 | CALL ctl_opn( numnam_ref, 'namelist_ref', 'OLD', 'FORMATTED', 'SEQUENTIAL', -1, 6, .FALSE. ) |
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| 258 | CALL ctl_opn( numnam_cfg, 'namelist_cfg', 'OLD', 'FORMATTED', 'SEQUENTIAL', -1, 6, .FALSE. ) |
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| 259 | ! |
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| 260 | REWIND( numnam_ref ) ! Namelist namctl in reference namelist |
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| 261 | READ ( numnam_ref, namctl, IOSTAT = ios, ERR = 901 ) |
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| 262 | 901 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namctl in reference namelist', .TRUE. ) |
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| 263 | REWIND( numnam_cfg ) ! Namelist namctl in confguration namelist |
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| 264 | READ ( numnam_cfg, namctl, IOSTAT = ios, ERR = 902 ) |
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| 265 | 902 IF( ios > 0 ) CALL ctl_nam ( ios , 'namctl in configuration namelist', .TRUE. ) |
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| 266 | ! |
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| 267 | REWIND( numnam_ref ) ! Namelist namcfg in reference namelist |
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| 268 | READ ( numnam_ref, namcfg, IOSTAT = ios, ERR = 903 ) |
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| 269 | 903 IF( ios /= 0 ) CALL ctl_nam ( ios , 'namcfg in reference namelist', .TRUE. ) |
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| 270 | REWIND( numnam_cfg ) ! Namelist namcfg in confguration namelist |
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| 271 | READ ( numnam_cfg, namcfg, IOSTAT = ios, ERR = 904 ) |
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| 272 | 904 IF( ios > 0 ) CALL ctl_nam ( ios , 'namcfg in configuration namelist', .TRUE. ) |
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| 273 | |
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| 274 | ! !--------------------------! |
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| 275 | ! ! Set global domain size ! (control print return in cltxt2) |
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| 276 | ! !--------------------------! |
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| 277 | IF( ln_read_cfg ) THEN ! Read sizes in domain configuration file |
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| 278 | CALL domain_cfg ( cltxt2, cn_cfg, nn_cfg, jpiglo, jpjglo, jpkglo, jperio ) |
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| 279 | ! |
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| 280 | ELSE ! user-defined namelist |
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| 281 | CALL usr_def_nam( cltxt2, clnam, cn_cfg, nn_cfg, jpiglo, jpjglo, jpkglo, jperio ) |
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| 282 | ENDIF |
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| 283 | ! |
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| 284 | ! |
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| 285 | ! !--------------------------------------------! |
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| 286 | ! ! set communicator & select the local node ! |
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| 287 | ! ! NB: mynode also opens output.namelist.dyn ! |
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| 288 | ! ! on unit number numond on first proc ! |
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| 289 | ! !--------------------------------------------! |
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| 290 | #if defined key_iomput |
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| 291 | IF( Agrif_Root() ) THEN |
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| 292 | IF( lk_oasis ) THEN |
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| 293 | CALL cpl_init( "oceanx", ilocal_comm ) ! nemo local communicator given by oasis |
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| 294 | CALL xios_initialize( "not used" ,local_comm= ilocal_comm ) ! send nemo communicator to xios |
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| 295 | ELSE |
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| 296 | CALL xios_initialize( "for_xios_mpi_id",return_comm=ilocal_comm ) ! nemo local communicator given by xios |
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| 297 | ENDIF |
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| 298 | ENDIF |
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| 299 | ! Nodes selection (control print return in cltxt) |
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| 300 | narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) |
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| 301 | #else |
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| 302 | IF( lk_oasis ) THEN |
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| 303 | IF( Agrif_Root() ) THEN |
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| 304 | CALL cpl_init( "oceanx", ilocal_comm ) ! nemo local communicator given by oasis |
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| 305 | ENDIF |
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| 306 | ! Nodes selection (control print return in cltxt) |
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| 307 | narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) |
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| 308 | ELSE |
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| 309 | ilocal_comm = 0 ! Nodes selection (control print return in cltxt) |
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| 310 | narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop ) |
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| 311 | ENDIF |
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| 312 | #endif |
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| 313 | |
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| 314 | narea = narea + 1 ! mynode return the rank of proc (0 --> jpnij -1 ) |
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| 315 | |
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| 316 | lwm = (narea == 1) ! control of output namelists |
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| 317 | lwp = (narea == 1) .OR. ln_ctl ! control of all listing output print |
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| 318 | |
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| 319 | IF(lwm) THEN ! write merged namelists from earlier to output namelist |
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| 320 | ! ! now that the file has been opened in call to mynode. |
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| 321 | ! ! NB: nammpp has already been written in mynode (if lk_mpp_mpi) |
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| 322 | WRITE( numond, namctl ) |
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| 323 | WRITE( numond, namcfg ) |
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| 324 | IF( .NOT.ln_read_cfg ) THEN |
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| 325 | DO ji = 1, SIZE(clnam) |
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| 326 | IF( TRIM(clnam(ji)) /= '' ) WRITE(numond, * ) clnam(ji) ! namusr_def print |
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| 327 | END DO |
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| 328 | ENDIF |
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| 329 | ENDIF |
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| 330 | |
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| 331 | IF(lwp) THEN ! open listing units |
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| 332 | ! |
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| 333 | CALL ctl_opn( numout, 'ocean.output', 'REPLACE', 'FORMATTED', 'SEQUENTIAL', -1, 6, .FALSE., narea ) |
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| 334 | ! |
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| 335 | WRITE(numout,*) |
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| 336 | WRITE(numout,*) ' CNRS - NERC - Met OFFICE - MERCATOR-ocean - INGV - CMCC' |
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| 337 | WRITE(numout,*) ' NEMO team' |
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| 338 | WRITE(numout,*) ' Ocean General Circulation Model' |
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| 339 | WRITE(numout,*) ' NEMO version 4.0 (2017) ' |
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| 340 | WRITE(numout,*) |
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| 341 | WRITE(numout,*) |
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| 342 | DO ji = 1, SIZE(cltxt) |
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| 343 | IF( TRIM(cltxt (ji)) /= '' ) WRITE(numout,*) cltxt(ji) ! control print of mynode |
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| 344 | END DO |
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| 345 | WRITE(numout,*) |
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| 346 | WRITE(numout,*) |
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| 347 | DO ji = 1, SIZE(cltxt2) |
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| 348 | IF( TRIM(cltxt2(ji)) /= '' ) WRITE(numout,*) cltxt2(ji) ! control print of domain size |
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| 349 | END DO |
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| 350 | ! |
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| 351 | WRITE(numout,cform_aaa) ! Flag AAAAAAA |
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| 352 | ! |
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| 353 | ENDIF |
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| 354 | ! ! Domain decomposition |
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| 355 | CALL mpp_init ! MPP |
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| 356 | |
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| 357 | ! Now we know the dimensions of the grid and numout has been set: we can allocate arrays |
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| 358 | CALL nemo_alloc() |
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| 359 | |
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| 360 | ! !-------------------------------! |
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| 361 | ! ! NEMO general initialization ! |
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| 362 | ! !-------------------------------! |
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| 363 | |
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| 364 | CALL nemo_ctl ! Control prints |
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| 365 | ! |
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| 366 | ! ! General initialization |
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| 367 | IF( ln_timing ) CALL timing_init ! timing |
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| 368 | IF( ln_timing ) CALL timing_start( 'nemo_init') |
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| 369 | ! |
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| 370 | CALL phy_cst ! Physical constants |
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| 371 | CALL eos_init ! Equation of state |
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| 372 | IF( lk_c1d ) CALL c1d_init ! 1D column configuration |
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| 373 | CALL wad_init ! Wetting and drying options |
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| 374 | CALL dom_init("OPA") ! Domain |
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| 375 | IF( ln_crs ) CALL crs_init ! coarsened grid: domain initialization |
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| 376 | IF( ln_ctl ) CALL prt_ctl_init ! Print control |
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| 377 | |
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| 378 | CALL diurnal_sst_bulk_init ! diurnal sst |
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| 379 | IF( ln_diurnal ) CALL diurnal_sst_coolskin_init ! cool skin |
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| 380 | ! |
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| 381 | IF( ln_diurnal_only ) THEN ! diurnal only: a subset of the initialisation routines |
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| 382 | CALL istate_init ! ocean initial state (Dynamics and tracers) |
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| 383 | CALL sbc_init ! Forcings : surface module |
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| 384 | CALL tra_qsr_init ! penetrative solar radiation qsr |
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| 385 | IF( ln_diaobs ) THEN ! Observation & model comparison |
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| 386 | CALL dia_obs_init ! Initialize observational data |
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| 387 | CALL dia_obs( nit000 - 1 ) ! Observation operator for restart |
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| 388 | ENDIF |
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| 389 | IF( lk_asminc ) CALL asm_inc_init ! Assimilation increments |
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| 390 | ! |
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| 391 | RETURN ! end of initialization |
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| 392 | ENDIF |
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| 393 | |
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| 394 | CALL istate_init ! ocean initial state (Dynamics and tracers) |
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| 395 | |
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| 396 | ! ! external forcing |
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| 397 | CALL tide_init ! tidal harmonics |
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| 398 | CALL sbc_init ! surface boundary conditions (including sea-ice) |
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| 399 | CALL bdy_init ! Open boundaries initialisation |
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| 400 | |
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| 401 | ! ! Ocean physics |
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| 402 | CALL zdf_phy_init ! Vertical physics |
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| 403 | |
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| 404 | ! ! Lateral physics |
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| 405 | CALL ldf_tra_init ! Lateral ocean tracer physics |
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| 406 | CALL ldf_eiv_init ! eddy induced velocity param. |
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| 407 | CALL ldf_dyn_init ! Lateral ocean momentum physics |
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| 408 | |
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| 409 | ! ! Active tracers |
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| 410 | IF( ln_traqsr ) CALL tra_qsr_init ! penetrative solar radiation qsr |
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| 411 | CALL tra_bbc_init ! bottom heat flux |
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| 412 | IF( ln_trabbl ) CALL tra_bbl_init ! advective (and/or diffusive) bottom boundary layer scheme |
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| 413 | CALL tra_dmp_init ! internal tracer damping |
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| 414 | CALL tra_adv_init ! horizontal & vertical advection |
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| 415 | CALL tra_ldf_init ! lateral mixing |
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| 416 | |
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| 417 | ! ! Dynamics |
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| 418 | IF( lk_c1d ) CALL dyn_dmp_init ! internal momentum damping |
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| 419 | CALL dyn_adv_init ! advection (vector or flux form) |
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| 420 | CALL dyn_vor_init ! vorticity term including Coriolis |
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| 421 | CALL dyn_ldf_init ! lateral mixing |
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| 422 | CALL dyn_hpg_init ! horizontal gradient of Hydrostatic pressure |
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| 423 | CALL dyn_spg_init ! surface pressure gradient |
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| 424 | |
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| 425 | #if defined key_top |
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| 426 | ! ! Passive tracers |
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| 427 | CALL trc_init |
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| 428 | #endif |
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| 429 | IF( l_ldfslp ) CALL ldf_slp_init ! slope of lateral mixing |
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| 430 | |
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| 431 | ! ! Icebergs |
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| 432 | CALL icb_init( rdt, nit000) ! initialise icebergs instance |
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| 433 | |
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| 434 | ! ! Misc. options |
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| 435 | CALL sto_par_init ! Stochastic parametrization |
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| 436 | IF( ln_sto_eos ) CALL sto_pts_init ! RRandom T/S fluctuations |
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| 437 | |
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| 438 | ! ! Diagnostics |
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| 439 | IF( lk_floats ) CALL flo_init ! drifting Floats |
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| 440 | IF( ln_diacfl ) CALL dia_cfl_init ! Initialise CFL diagnostics |
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| 441 | CALL dia_ptr_init ! Poleward TRansports initialization |
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| 442 | IF( lk_diadct ) CALL dia_dct_init ! Sections tranports |
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| 443 | CALL dia_hsb_init ! heat content, salt content and volume budgets |
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| 444 | CALL trd_init ! Mixed-layer/Vorticity/Integral constraints trends |
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| 445 | CALL dia_obs_init ! Initialize observational data |
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| 446 | CALL dia_tmb_init ! TMB outputs |
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| 447 | CALL dia_25h_init ! 25h mean outputs |
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| 448 | IF( ln_diaobs ) CALL dia_obs( nit000-1 ) ! Observation operator for restart |
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| 449 | |
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| 450 | ! ! Assimilation increments |
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| 451 | IF( lk_asminc ) CALL asm_inc_init ! Initialize assimilation increments |
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| 452 | ! |
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| 453 | IF(lwp) WRITE(numout,cform_aaa) ! Flag AAAAAAA |
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| 454 | ! |
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| 455 | IF( ln_timing ) CALL timing_stop( 'nemo_init') |
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| 456 | ! |
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| 457 | END SUBROUTINE nemo_init |
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| 458 | |
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| 459 | |
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| 460 | SUBROUTINE nemo_ctl |
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| 461 | !!---------------------------------------------------------------------- |
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| 462 | !! *** ROUTINE nemo_ctl *** |
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| 463 | !! |
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| 464 | !! ** Purpose : control print setting |
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| 465 | !! |
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| 466 | !! ** Method : - print namctl information and check some consistencies |
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| 467 | !!---------------------------------------------------------------------- |
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| 468 | ! |
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| 469 | IF(lwp) THEN ! control print |
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| 470 | WRITE(numout,*) |
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| 471 | WRITE(numout,*) 'nemo_ctl: Control prints' |
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| 472 | WRITE(numout,*) '~~~~~~~~' |
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| 473 | WRITE(numout,*) ' Namelist namctl' |
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| 474 | WRITE(numout,*) ' run control (for debugging) ln_ctl = ', ln_ctl |
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| 475 | WRITE(numout,*) ' level of print nn_print = ', nn_print |
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| 476 | WRITE(numout,*) ' Start i indice for SUM control nn_ictls = ', nn_ictls |
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| 477 | WRITE(numout,*) ' End i indice for SUM control nn_ictle = ', nn_ictle |
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| 478 | WRITE(numout,*) ' Start j indice for SUM control nn_jctls = ', nn_jctls |
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| 479 | WRITE(numout,*) ' End j indice for SUM control nn_jctle = ', nn_jctle |
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| 480 | WRITE(numout,*) ' number of proc. following i nn_isplt = ', nn_isplt |
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| 481 | WRITE(numout,*) ' number of proc. following j nn_jsplt = ', nn_jsplt |
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| 482 | WRITE(numout,*) ' timing by routine ln_timing = ', ln_timing |
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| 483 | WRITE(numout,*) ' CFL diagnostics ln_diacfl = ', ln_diacfl |
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| 484 | ENDIF |
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| 485 | ! |
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| 486 | nprint = nn_print ! convert DOCTOR namelist names into OLD names |
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| 487 | nictls = nn_ictls |
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| 488 | nictle = nn_ictle |
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| 489 | njctls = nn_jctls |
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| 490 | njctle = nn_jctle |
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| 491 | isplt = nn_isplt |
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| 492 | jsplt = nn_jsplt |
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| 493 | |
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| 494 | IF(lwp) THEN ! control print |
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| 495 | WRITE(numout,*) |
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| 496 | WRITE(numout,*) ' Namelist namcfg' |
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| 497 | WRITE(numout,*) ' read domain configuration file ln_read_cfg = ', ln_read_cfg |
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| 498 | WRITE(numout,*) ' filename to be read cn_domcfg = ', TRIM(cn_domcfg) |
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| 499 | WRITE(numout,*) ' keep closed seas in the domain (if exist) ln_closea = ', ln_closea |
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| 500 | WRITE(numout,*) ' create a configuration definition file ln_write_cfg = ', ln_write_cfg |
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| 501 | WRITE(numout,*) ' filename to be written cn_domcfg_out = ', TRIM(cn_domcfg_out) |
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| 502 | WRITE(numout,*) ' use file attribute if exists as i/p j-start ln_use_jattr = ', ln_use_jattr |
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| 503 | ENDIF |
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| 504 | IF( .NOT.ln_read_cfg ) ln_closea = .false. ! dealing possible only with a domcfg file |
|---|
| 505 | ! |
|---|
| 506 | ! ! Parameter control |
|---|
| 507 | ! |
|---|
| 508 | IF( ln_ctl ) THEN ! sub-domain area indices for the control prints |
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| 509 | IF( lk_mpp .AND. jpnij > 1 ) THEN |
|---|
| 510 | isplt = jpni ; jsplt = jpnj ; ijsplt = jpni*jpnj ! the domain is forced to the real split domain |
|---|
| 511 | ELSE |
|---|
| 512 | IF( isplt == 1 .AND. jsplt == 1 ) THEN |
|---|
| 513 | CALL ctl_warn( ' - isplt & jsplt are equal to 1', & |
|---|
| 514 | & ' - the print control will be done over the whole domain' ) |
|---|
| 515 | ENDIF |
|---|
| 516 | ijsplt = isplt * jsplt ! total number of processors ijsplt |
|---|
| 517 | ENDIF |
|---|
| 518 | IF(lwp) WRITE(numout,*)' - The total number of processors over which the' |
|---|
| 519 | IF(lwp) WRITE(numout,*)' print control will be done is ijsplt : ', ijsplt |
|---|
| 520 | ! |
|---|
| 521 | ! ! indices used for the SUM control |
|---|
| 522 | IF( nictls+nictle+njctls+njctle == 0 ) THEN ! print control done over the default area |
|---|
| 523 | lsp_area = .FALSE. |
|---|
| 524 | ELSE ! print control done over a specific area |
|---|
| 525 | lsp_area = .TRUE. |
|---|
| 526 | IF( nictls < 1 .OR. nictls > jpiglo ) THEN |
|---|
| 527 | CALL ctl_warn( ' - nictls must be 1<=nictls>=jpiglo, it is forced to 1' ) |
|---|
| 528 | nictls = 1 |
|---|
| 529 | ENDIF |
|---|
| 530 | IF( nictle < 1 .OR. nictle > jpiglo ) THEN |
|---|
| 531 | CALL ctl_warn( ' - nictle must be 1<=nictle>=jpiglo, it is forced to jpiglo' ) |
|---|
| 532 | nictle = jpiglo |
|---|
| 533 | ENDIF |
|---|
| 534 | IF( njctls < 1 .OR. njctls > jpjglo ) THEN |
|---|
| 535 | CALL ctl_warn( ' - njctls must be 1<=njctls>=jpjglo, it is forced to 1' ) |
|---|
| 536 | njctls = 1 |
|---|
| 537 | ENDIF |
|---|
| 538 | IF( njctle < 1 .OR. njctle > jpjglo ) THEN |
|---|
| 539 | CALL ctl_warn( ' - njctle must be 1<=njctle>=jpjglo, it is forced to jpjglo' ) |
|---|
| 540 | njctle = jpjglo |
|---|
| 541 | ENDIF |
|---|
| 542 | ENDIF |
|---|
| 543 | ENDIF |
|---|
| 544 | ! |
|---|
| 545 | IF( 1._wp /= SIGN(1._wp,-0._wp) ) CALL ctl_stop( 'nemo_ctl: The intrinsec SIGN function follows f2003 standard.', & |
|---|
| 546 | & 'Compile with key_nosignedzero enabled' ) |
|---|
| 547 | ! |
|---|
| 548 | #if defined key_agrif |
|---|
| 549 | IF( ln_timing ) CALL ctl_stop( 'AGRIF not implemented with ln_timing = true') |
|---|
| 550 | #endif |
|---|
| 551 | ! |
|---|
| 552 | END SUBROUTINE nemo_ctl |
|---|
| 553 | |
|---|
| 554 | |
|---|
| 555 | SUBROUTINE nemo_closefile |
|---|
| 556 | !!---------------------------------------------------------------------- |
|---|
| 557 | !! *** ROUTINE nemo_closefile *** |
|---|
| 558 | !! |
|---|
| 559 | !! ** Purpose : Close the files |
|---|
| 560 | !!---------------------------------------------------------------------- |
|---|
| 561 | ! |
|---|
| 562 | IF( lk_mpp ) CALL mppsync |
|---|
| 563 | ! |
|---|
| 564 | CALL iom_close ! close all input/output files managed by iom_* |
|---|
| 565 | ! |
|---|
| 566 | IF( numstp /= -1 ) CLOSE( numstp ) ! time-step file |
|---|
| 567 | IF( numrun /= -1 ) CLOSE( numrun ) ! run statistics file |
|---|
| 568 | IF( numnam_ref /= -1 ) CLOSE( numnam_ref ) ! oce reference namelist |
|---|
| 569 | IF( numnam_cfg /= -1 ) CLOSE( numnam_cfg ) ! oce configuration namelist |
|---|
| 570 | IF( lwm.AND.numond /= -1 ) CLOSE( numond ) ! oce output namelist |
|---|
| 571 | IF( numnam_ice_ref /= -1 ) CLOSE( numnam_ice_ref ) ! ice reference namelist |
|---|
| 572 | IF( numnam_ice_cfg /= -1 ) CLOSE( numnam_ice_cfg ) ! ice configuration namelist |
|---|
| 573 | IF( lwm.AND.numoni /= -1 ) CLOSE( numoni ) ! ice output namelist |
|---|
| 574 | IF( numevo_ice /= -1 ) CLOSE( numevo_ice ) ! ice variables (temp. evolution) |
|---|
| 575 | IF( numout /= 6 ) CLOSE( numout ) ! standard model output file |
|---|
| 576 | IF( numdct_vol /= -1 ) CLOSE( numdct_vol ) ! volume transports |
|---|
| 577 | IF( numdct_heat /= -1 ) CLOSE( numdct_heat ) ! heat transports |
|---|
| 578 | IF( numdct_salt /= -1 ) CLOSE( numdct_salt ) ! salt transports |
|---|
| 579 | ! |
|---|
| 580 | numout = 6 ! redefine numout in case it is used after this point... |
|---|
| 581 | ! |
|---|
| 582 | END SUBROUTINE nemo_closefile |
|---|
| 583 | |
|---|
| 584 | |
|---|
| 585 | SUBROUTINE nemo_alloc |
|---|
| 586 | !!---------------------------------------------------------------------- |
|---|
| 587 | !! *** ROUTINE nemo_alloc *** |
|---|
| 588 | !! |
|---|
| 589 | !! ** Purpose : Allocate all the dynamic arrays of the OPA modules |
|---|
| 590 | !! |
|---|
| 591 | !! ** Method : |
|---|
| 592 | !!---------------------------------------------------------------------- |
|---|
| 593 | USE diawri , ONLY : dia_wri_alloc |
|---|
| 594 | USE dom_oce , ONLY : dom_oce_alloc |
|---|
| 595 | USE trc_oce , ONLY : trc_oce_alloc |
|---|
| 596 | USE bdy_oce , ONLY : bdy_oce_alloc |
|---|
| 597 | #if defined key_diadct |
|---|
| 598 | USE diadct , ONLY : diadct_alloc |
|---|
| 599 | #endif |
|---|
| 600 | ! |
|---|
| 601 | INTEGER :: ierr |
|---|
| 602 | !!---------------------------------------------------------------------- |
|---|
| 603 | ! |
|---|
| 604 | ierr = oce_alloc () ! ocean |
|---|
| 605 | ierr = ierr + dia_wri_alloc() |
|---|
| 606 | ierr = ierr + dom_oce_alloc() ! ocean domain |
|---|
| 607 | ierr = ierr + zdf_oce_alloc() ! ocean vertical physics |
|---|
| 608 | ierr = ierr + trc_oce_alloc() ! shared TRC / TRA arrays |
|---|
| 609 | ierr = ierr + bdy_oce_alloc() ! bdy masks (incl. initialization) |
|---|
| 610 | ierr = ierr + scoce_alloc() ! scratch arrays |
|---|
| 611 | ! |
|---|
| 612 | #if defined key_diadct |
|---|
| 613 | ierr = ierr + diadct_alloc () ! |
|---|
| 614 | #endif |
|---|
| 615 | ! |
|---|
| 616 | IF( lk_mpp ) CALL mpp_sum( ierr ) |
|---|
| 617 | IF( ierr /= 0 ) CALL ctl_stop( 'STOP', 'nemo_alloc: unable to allocate standard ocean arrays' ) |
|---|
| 618 | ! |
|---|
| 619 | END SUBROUTINE nemo_alloc |
|---|
| 620 | |
|---|
| 621 | !!====================================================================== |
|---|
| 622 | END MODULE nemogcm |
|---|
| 623 | |
|---|
