1 | MODULE p4zagg |
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2 | !!====================================================================== |
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3 | !! *** MODULE p4zagg *** |
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4 | !! TOP : PISCES aggregation of particles (DOC, POC, GOC) |
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5 | !! This module is the same for both PISCES and PISCES-QUOTA |
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6 | !!====================================================================== |
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7 | !! History : 1.0 ! 2004 (O. Aumont) Original code |
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8 | !! 2.0 ! 2007-12 (C. Ethe, G. Madec) F90 |
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9 | !! 3.4 ! 2011-06 (O. Aumont, C. Ethe) Change aggregation formula |
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10 | !! 3.5 ! 2012-07 (O. Aumont) Introduce potential time-splitting |
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11 | !! 3.6 ! 2015-05 (O. Aumont) PISCES quota |
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12 | !!---------------------------------------------------------------------- |
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13 | |
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14 | !!---------------------------------------------------------------------- |
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15 | !! p4z_agg : Compute aggregation of particles |
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16 | !!---------------------------------------------------------------------- |
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17 | USE oce_trc ! shared variables between ocean and passive tracers |
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18 | USE trc ! passive tracers common variables |
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19 | USE sms_pisces ! PISCES Source Minus Sink variables |
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20 | USE prtctl ! print control for debugging |
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21 | |
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22 | IMPLICIT NONE |
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23 | PRIVATE |
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24 | |
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25 | PUBLIC p4z_agg ! called in p4zbio.F90 |
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26 | |
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27 | !! * Substitutions |
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28 | # include "do_loop_substitute.h90" |
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29 | !!---------------------------------------------------------------------- |
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30 | !! NEMO/TOP 4.0 , NEMO Consortium (2018) |
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31 | !! $Id$ |
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32 | !! Software governed by the CeCILL license (see ./LICENSE) |
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33 | !!---------------------------------------------------------------------- |
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34 | CONTAINS |
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35 | |
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36 | SUBROUTINE p4z_agg ( kt, knt, Kbb, Krhs ) |
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37 | !!--------------------------------------------------------------------- |
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38 | !! *** ROUTINE p4z_agg *** |
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39 | !! |
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40 | !! ** Purpose : Compute aggregation of particle. Aggregation by |
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41 | !! brownian motion, differential settling and shear |
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42 | !! are considered. |
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43 | !! |
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44 | !! ** Method : - Aggregation rates are computed assuming a fixed and |
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45 | !! constant size spectrum in the different particulate |
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46 | !! pools. The coagulation rates have been computed |
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47 | !! externally using dedicated programs (O. Aumont). They |
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48 | !! are hard-coded because they can't be changed |
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49 | !! independently of each other. |
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50 | !!--------------------------------------------------------------------- |
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51 | INTEGER, INTENT(in) :: kt, knt ! |
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52 | INTEGER, INTENT(in) :: Kbb, Krhs ! time level indices |
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53 | ! |
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54 | INTEGER :: ji, jj, jk |
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55 | REAL(wp) :: zagg, zagg1, zagg2, zagg3, zagg4 |
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56 | REAL(wp) :: zaggpoc1, zaggpoc2, zaggpoc3, zaggpoc4 |
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57 | REAL(wp) :: zaggpoc , zaggfe, zaggdoc, zaggdoc2, zaggdoc3 |
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58 | REAL(wp) :: zaggpon , zaggdon, zaggdon2, zaggdon3 |
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59 | REAL(wp) :: zaggpop, zaggdop, zaggdop2, zaggdop3 |
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60 | REAL(wp) :: zaggtmp, zfact, zmax |
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61 | CHARACTER (len=25) :: charout |
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62 | !!--------------------------------------------------------------------- |
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63 | ! |
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64 | IF( ln_timing ) CALL timing_start('p4z_agg') |
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65 | ! |
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66 | ! Exchange between organic matter compartments due to |
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67 | ! coagulation/disaggregation |
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68 | ! --------------------------------------------------- |
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69 | |
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70 | ! PISCES part |
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71 | IF( ln_p4z ) THEN |
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72 | ! |
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73 | DO_3D( nn_hls, nn_hls, nn_hls, nn_hls, 1, jpkm1 ) |
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74 | ! |
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75 | zfact = xstep * xdiss(ji,jj,jk) |
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76 | ! Part I : Coagulation dependent on turbulence |
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77 | ! The stickiness has been assumed to be 0.1 |
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78 | ! Part I : Coagulation dependent on turbulence |
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79 | zagg1 = 12.5 * zfact * tr(ji,jj,jk,jppoc,Kbb) * tr(ji,jj,jk,jppoc,Kbb) |
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80 | zagg2 = 169.7 * zfact * tr(ji,jj,jk,jppoc,Kbb) * tr(ji,jj,jk,jpgoc,Kbb) |
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81 | |
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82 | ! Part II : Differential settling |
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83 | ! Aggregation of small into large particles |
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84 | ! The stickiness has been assumed to be 0.1 |
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85 | zagg3 = 8.63 * xstep * tr(ji,jj,jk,jppoc,Kbb) * tr(ji,jj,jk,jppoc,Kbb) |
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86 | zagg4 = 132.8 * xstep * tr(ji,jj,jk,jppoc,Kbb) * tr(ji,jj,jk,jpgoc,Kbb) |
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87 | |
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88 | zagg = zagg1 + zagg2 + zagg3 + zagg4 |
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89 | zaggfe = zagg * tr(ji,jj,jk,jpsfe,Kbb) / ( tr(ji,jj,jk,jppoc,Kbb) + rtrn ) |
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90 | |
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91 | ! Aggregation of DOC to POC : |
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92 | ! 1st term is shear aggregation of DOC-DOC |
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93 | ! 2nd term is shear aggregation of DOC-POC |
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94 | ! 3rd term is differential settling of DOC-POC |
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95 | ! 1/3 of DOC is supposed to experience aggregation (HMW) |
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96 | zaggdoc = ( ( 12.0 * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) + 9.05 * tr(ji,jj,jk,jppoc,Kbb) ) * zfact & |
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97 | & + 2.49 * xstep * tr(ji,jj,jk,jppoc,Kbb) ) * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) |
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98 | ! transfer of DOC to GOC : |
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99 | ! 1st term is shear aggregation |
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100 | ! 1/3 of DOC is supposed to experience aggregation (HMW) |
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101 | zaggdoc2 = ( 1.94 * zfact + 1.37 * xstep ) * tr(ji,jj,jk,jpgoc,Kbb) * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) |
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102 | ! tranfer of DOC to POC due to brownian motion |
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103 | ! The temperature dependency has been omitted. |
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104 | zaggdoc3 = ( 127.8 * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) + 725.7 * tr(ji,jj,jk,jppoc,Kbb) ) * xstep * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) |
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105 | |
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106 | ! Update the trends |
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107 | tr(ji,jj,jk,jppoc,Krhs) = tr(ji,jj,jk,jppoc,Krhs) - zagg + zaggdoc + zaggdoc3 |
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108 | tr(ji,jj,jk,jpgoc,Krhs) = tr(ji,jj,jk,jpgoc,Krhs) + zagg + zaggdoc2 |
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109 | tr(ji,jj,jk,jpsfe,Krhs) = tr(ji,jj,jk,jpsfe,Krhs) - zaggfe |
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110 | tr(ji,jj,jk,jpbfe,Krhs) = tr(ji,jj,jk,jpbfe,Krhs) + zaggfe |
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111 | tr(ji,jj,jk,jpdoc,Krhs) = tr(ji,jj,jk,jpdoc,Krhs) - zaggdoc - zaggdoc2 - zaggdoc3 |
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112 | ! |
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113 | conspoc(ji,jj,jk) = conspoc(ji,jj,jk) - zagg + zaggdoc + zaggdoc3 |
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114 | prodgoc(ji,jj,jk) = prodgoc(ji,jj,jk) + zagg + zaggdoc2 |
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115 | ! |
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116 | END_3D |
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117 | ELSE ! ln_p5z |
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118 | ! PISCES-QUOTA part |
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119 | ! |
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120 | DO_3D( nn_hls, nn_hls, nn_hls, nn_hls, 1, jpkm1 ) |
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121 | ! |
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122 | zfact = xstep * xdiss(ji,jj,jk) |
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123 | ! Part I : Coagulation dependent on turbulence |
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124 | ! The stickiness has been assumed to be 0.1 |
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125 | zaggtmp = 25.9 * zfact * tr(ji,jj,jk,jppoc,Kbb) |
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126 | zaggpoc1 = zaggtmp * tr(ji,jj,jk,jppoc,Kbb) |
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127 | zaggtmp = 4452. * zfact * tr(ji,jj,jk,jpgoc,Kbb) |
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128 | zaggpoc2 = zaggtmp * tr(ji,jj,jk,jppoc,Kbb) |
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129 | |
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130 | ! Part II : Differential settling |
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131 | ! The stickiness has been assumed to be 0.1 |
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132 | |
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133 | ! Aggregation of small into large particles |
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134 | zaggtmp = 47.1 * xstep * tr(ji,jj,jk,jpgoc,Kbb) |
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135 | zaggpoc3 = zaggtmp * tr(ji,jj,jk,jppoc,Kbb) |
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136 | zaggtmp = 3.3 * xstep * tr(ji,jj,jk,jppoc,Kbb) |
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137 | zaggpoc4 = zaggtmp * tr(ji,jj,jk,jppoc,Kbb) |
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138 | |
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139 | zaggpoc = zaggpoc1 + zaggpoc2 + zaggpoc3 + zaggpoc4 |
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140 | zaggpon = zaggpoc * tr(ji,jj,jk,jppon,Kbb) / ( tr(ji,jj,jk,jppoc,Kbb) + rtrn) |
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141 | zaggpop = zaggpoc * tr(ji,jj,jk,jppop,Kbb) / ( tr(ji,jj,jk,jppoc,Kbb) + rtrn) |
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142 | zaggfe = zaggpoc * tr(ji,jj,jk,jpsfe,Kbb) / ( tr(ji,jj,jk,jppoc,Kbb) + rtrn ) |
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143 | |
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144 | ! Aggregation of DOC to POC : |
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145 | ! 1st term is shear aggregation of DOC-DOC |
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146 | ! 2nd term is shear aggregation of DOC-POC |
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147 | ! 3rd term is differential settling of DOC-POC |
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148 | ! 1/3 of DOC is supposed to experience aggregation (HMW) |
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149 | zaggtmp = ( ( 0.37 * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) + 20.5 * tr(ji,jj,jk,jppoc,Kbb) ) * zfact & |
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150 | & + 0.15 * xstep * tr(ji,jj,jk,jppoc,Kbb) ) |
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151 | zaggdoc = zaggtmp * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) |
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152 | zaggdon = zaggtmp * 0.3 * tr(ji,jj,jk,jpdon,Kbb) |
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153 | zaggdop = zaggtmp * 0.3 * tr(ji,jj,jk,jpdop,Kbb) |
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154 | |
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155 | ! transfer of DOC to GOC : |
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156 | ! 1st term is shear aggregation |
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157 | ! 2nd term is differential settling |
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158 | ! 1/3 of DOC is supposed to experience aggregation (HMW) |
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159 | zaggtmp = 655.4 * zfact * tr(ji,jj,jk,jpgoc,Kbb) |
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160 | zaggdoc2 = zaggtmp * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) |
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161 | zaggdon2 = zaggtmp * 0.3 * tr(ji,jj,jk,jpdon,Kbb) |
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162 | zaggdop2 = zaggtmp * 0.3 * tr(ji,jj,jk,jpdop,Kbb) |
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163 | |
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164 | ! tranfer of DOC to POC due to brownian motion |
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165 | ! 1/3 of DOC is supposed to experience aggregation (HMW) |
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166 | zaggtmp = ( 260.2 * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) + 418.5 * tr(ji,jj,jk,jppoc,Kbb) ) * xstep |
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167 | zaggdoc3 = zaggtmp * 0.3 * tr(ji,jj,jk,jpdoc,Kbb) |
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168 | zaggdon3 = zaggtmp * 0.3 * tr(ji,jj,jk,jpdon,Kbb) |
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169 | zaggdop3 = zaggtmp * 0.3 * tr(ji,jj,jk,jpdop,Kbb) |
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170 | |
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171 | |
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172 | ! Update the trends |
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173 | tr(ji,jj,jk,jppoc,Krhs) = tr(ji,jj,jk,jppoc,Krhs) - zaggpoc + zaggdoc + zaggdoc3 |
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174 | tr(ji,jj,jk,jppon,Krhs) = tr(ji,jj,jk,jppon,Krhs) - zaggpon + zaggdon + zaggdon3 |
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175 | tr(ji,jj,jk,jppop,Krhs) = tr(ji,jj,jk,jppop,Krhs) - zaggpop + zaggdop + zaggdop3 |
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176 | tr(ji,jj,jk,jpgoc,Krhs) = tr(ji,jj,jk,jpgoc,Krhs) + zaggpoc + zaggdoc2 |
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177 | tr(ji,jj,jk,jpgon,Krhs) = tr(ji,jj,jk,jpgon,Krhs) + zaggpon + zaggdon2 |
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178 | tr(ji,jj,jk,jpgop,Krhs) = tr(ji,jj,jk,jpgop,Krhs) + zaggpop + zaggdop2 |
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179 | tr(ji,jj,jk,jpsfe,Krhs) = tr(ji,jj,jk,jpsfe,Krhs) - zaggfe |
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180 | tr(ji,jj,jk,jpbfe,Krhs) = tr(ji,jj,jk,jpbfe,Krhs) + zaggfe |
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181 | tr(ji,jj,jk,jpdoc,Krhs) = tr(ji,jj,jk,jpdoc,Krhs) - zaggdoc - zaggdoc2 - zaggdoc3 |
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182 | tr(ji,jj,jk,jpdon,Krhs) = tr(ji,jj,jk,jpdon,Krhs) - zaggdon - zaggdon2 - zaggdon3 |
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183 | tr(ji,jj,jk,jpdop,Krhs) = tr(ji,jj,jk,jpdop,Krhs) - zaggdop - zaggdop2 - zaggdop3 |
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184 | ! |
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185 | conspoc(ji,jj,jk) = conspoc(ji,jj,jk) - zaggpoc + zaggdoc + zaggdoc3 |
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186 | prodgoc(ji,jj,jk) = prodgoc(ji,jj,jk) + zaggpoc + zaggdoc2 |
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187 | ! |
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188 | END_3D |
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189 | ! |
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190 | ENDIF |
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191 | ! |
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192 | IF(sn_cfctl%l_prttrc) THEN ! print mean trends (used for debugging) |
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193 | WRITE(charout, FMT="('agg')") |
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194 | CALL prt_ctl_info( charout, cdcomp = 'top' ) |
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195 | CALL prt_ctl(tab4d_1=tr(:,:,:,:,Krhs), mask1=tmask, clinfo=ctrcnm) |
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196 | ENDIF |
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197 | ! |
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198 | IF( ln_timing ) CALL timing_stop('p4z_agg') |
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199 | ! |
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200 | END SUBROUTINE p4z_agg |
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201 | |
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202 | !!====================================================================== |
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203 | END MODULE p4zagg |
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