[3520] | 1 | #!/bin/bash |
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| 2 | ############################################################# |
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| 3 | # Author : Simona Flavoni for NEMO |
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| 4 | # Contact : sflod@locean-ipsl.upmc.fr |
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| 5 | # |
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| 6 | # sette.sh : principal script of SET TEsts for NEMO (SETTE) |
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| 7 | # ---------------------------------------------------------------------- |
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| 8 | # NEMO/SETTE , NEMO Consortium (2010) |
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| 9 | # Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
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| 10 | # ---------------------------------------------------------------------- |
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| 11 | # |
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| 12 | ############################################################# |
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[3577] | 13 | #set -x |
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[3520] | 14 | set -o posix |
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| 15 | #set -u |
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| 16 | #set -e |
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| 17 | #+ |
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| 18 | # |
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| 19 | # ================ |
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| 20 | # sette.sh |
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| 21 | # ================ |
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| 22 | # |
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| 23 | # ---------------------------------------------- |
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| 24 | # Set of tests for NEMO |
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| 25 | # ---------------------------------------------- |
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| 26 | # |
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| 27 | # SYNOPSIS |
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| 28 | # ======== |
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| 29 | # |
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| 30 | # :: |
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| 31 | # |
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| 32 | # $ ./sette.sh |
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| 33 | # |
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| 34 | # DESCRIPTION |
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| 35 | # =========== |
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| 36 | # |
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| 37 | # Variables to be checked by user: |
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| 38 | # |
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| 39 | # COMPILER : name of compiler as defined in NEMOGCM/ARCH directory |
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| 40 | # |
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| 41 | # BATCH_COMMAND : name of the command for batch submission |
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| 42 | # |
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| 43 | # MPI_INTERACT : |
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| 44 | # |
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| 45 | # for MPP tests, "no" for batch execution, "yes" for interactive execution |
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| 46 | # |
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| 47 | # NOTE: for run with 1 process tests are run always in MPI_INTERACT="yes" |
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| 48 | # |
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| 49 | # Principal script is sette.sh, that calls |
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| 50 | # |
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| 51 | # makenemo |
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| 52 | # |
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| 53 | # creates the exectuable in ${CONFIG_NAME}/BLD/bin/nemo.exe (and its link opa in ${CONFIG_NAME}/EXP00) |
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| 54 | # |
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| 55 | # param.cfg : sets and loads following directories: |
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| 56 | # |
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| 57 | # FORCING_DIR : is the directory for forcing files (tarfile) |
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| 58 | # |
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| 59 | # INPUT_DIR : is the directory for input files storing |
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| 60 | # |
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| 61 | # TMPDIR : is the temporary directory (if needed) |
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| 62 | # |
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| 63 | # NEMO_VALIDATION_DIR : is the validation directory |
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| 64 | # |
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| 65 | # (NOTE: this file is the same for all configrations to be tested with sette) |
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| 66 | # |
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| 67 | # |
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| 68 | # all_functions.sh : loads functions used by sette (note: new functions can be added here) |
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| 69 | # |
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| 70 | # set_namelist : function declared in all_functions that set namelist parameters for tests |
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| 71 | # |
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| 72 | # post_test_tidyup : creates validation storage directory and copy needed output files (solver.stat and ocean.output) in it after execution of test. |
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| 73 | # |
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| 74 | # Tree of VALIDATION is: |
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| 75 | # |
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| 76 | # NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE) |
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| 77 | # |
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| 78 | # |
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| 79 | # prepare_exe_dir.sh : defines and creates directory where the test is executed |
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| 80 | # |
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| 81 | # execution directory takes name of TEST_NAME defined in every test in sette.sh |
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| 82 | # |
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| 83 | # ( each test in executed in its own directory ) |
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| 84 | # |
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| 85 | # |
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| 86 | # fcm_job.sh |
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| 87 | # |
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| 88 | # runs job in interactive or batch mode : all jobs using 1 process are run interactive, and all MPP jobs are |
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| 89 | # |
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| 90 | # run in batch (MPI_INTERACT="no") or interactive (MPI_INTERACT="yes") see sette.sh and BATCH_TEMPLATE directory |
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| 91 | # |
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| 92 | # (note this job needs to have an input_CONFIG.cfg in which can be found input tar file) |
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| 93 | # |
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| 94 | # NOTE: if job is not launched for some problems you have executable ready in ${EXE_DIR} directory |
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| 95 | # |
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| 96 | # NOTE: the changed namelists are leaved in ${EXE_DIR} directory whereas original namelist remains in ${NEW_CONF}/EXP00 |
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| 97 | # |
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| 98 | # in ${SETTE_DIR} is created output.sette with the echo of executed commands |
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| 99 | # |
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| 100 | # if sette.sh is stopped in output.sette there is written the last command executed by sette.sh |
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| 101 | # |
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| 102 | # if you run: ./sette.sh 2>&1 | tee out.sette |
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| 103 | # |
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| 104 | # in ${SETTE_DIR} out.sette is redirected standard error & standard output |
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| 105 | # |
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| 106 | # |
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| 107 | # EXAMPLES |
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| 108 | # ======== |
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| 109 | # |
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| 110 | # :: |
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| 111 | # |
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| 112 | # $ ./sette.sh |
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| 113 | # |
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| 114 | # |
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| 115 | # TODO |
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| 116 | # ==== |
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| 117 | # |
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| 118 | # option debug |
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| 119 | # |
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| 120 | # EVOLUTIONS |
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| 121 | # ========== |
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| 122 | # |
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[3577] | 123 | # $Id:$ |
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[3520] | 124 | # |
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| 125 | # * creation |
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| 126 | # |
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| 127 | #- |
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| 128 | # |
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| 129 | #- |
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| 130 | # Compiler among those in NEMOGCM/ARCH |
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| 131 | COMPILER=PW6_VARGAS |
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| 132 | export BATCH_COMMAND_PAR="llsubmit" |
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| 133 | export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR |
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| 134 | export INTERACT_FLAG="no" |
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| 135 | export MPIRUN_FLAG="yes" |
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| 136 | |
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| 137 | # Directory to run the tests |
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| 138 | SETTE_DIR=$(cd $(dirname "$0"); pwd) |
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| 139 | MAIN_DIR=${SETTE_DIR%/SETTE} |
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| 140 | CONFIG_DIR=${MAIN_DIR}/CONFIG |
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| 141 | TOOLS_DIR=${MAIN_DIR}/TOOLS |
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| 142 | COMPIL_DIR=${TOOLS_DIR}/COMPILE |
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| 143 | |
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| 144 | CMP_NAM=${1:-$COMPILER} |
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| 145 | # Copy job_batch_COMPILER file for specific compiler into job_batch_template |
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| 146 | cd ${SETTE_DIR} |
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| 147 | cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit |
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| 148 | |
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[3521] | 149 | for config in 1 2 3 4 5 6 7 8 9 |
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[3520] | 150 | do |
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| 151 | |
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| 152 | # TESTS FOR GYRE_LOBSTER CONFIGURATION |
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| 153 | if [ ${config} -eq 1 ] ; then |
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| 154 | ## Restartability tests for GYRE_LOBSTER |
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| 155 | export TEST_NAME="LONG" |
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| 156 | cd ${SETTE_DIR} |
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[3577] | 157 | . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRELOB_LONG -r GYRE_LOBSTER add_key "key_mpp_mpi" |
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[3520] | 158 | cd ${SETTE_DIR} |
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| 159 | . param.cfg |
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| 160 | . all_functions.sh |
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| 161 | . prepare_exe_dir.sh |
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| 162 | JOB_FILE=${EXE_DIR}/run_job.sh |
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[3577] | 163 | NPROC=4 |
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[3520] | 164 | \rm ${JOB_FILE} |
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| 165 | cd ${EXE_DIR} |
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| 166 | set_namelist namelist cn_exp \"GYRELOB_LONG\" |
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| 167 | set_namelist namelist nn_it000 1 |
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| 168 | set_namelist namelist nn_itend 120 |
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| 169 | set_namelist namelist nn_stock 60 |
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| 170 | set_namelist namelist ln_clobber .true. |
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| 171 | set_namelist namelist nn_solv 2 |
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| 172 | set_namelist namelist_top ln_diatrc .false. |
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[3577] | 173 | set_namelist namelist jpni 2 |
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| 174 | set_namelist namelist jpnj 2 |
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| 175 | set_namelist namelist jpnij 4 |
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[3520] | 176 | cd ${SETTE_DIR} |
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[3577] | 177 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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[3520] | 178 | |
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| 179 | cd ${SETTE_DIR} |
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| 180 | export TEST_NAME="SHORT" |
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| 181 | . prepare_exe_dir.sh |
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| 182 | cd ${EXE_DIR} |
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| 183 | set_namelist namelist cn_exp \"GYRELOB_SHORT\" |
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| 184 | set_namelist namelist nn_it000 61 |
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| 185 | set_namelist namelist nn_itend 120 |
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| 186 | set_namelist namelist nn_stock 60 |
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| 187 | set_namelist namelist ln_rstart .true. |
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| 188 | set_namelist namelist nn_rstctl 2 |
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| 189 | set_namelist namelist ln_clobber .true. |
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| 190 | set_namelist namelist nn_solv 2 |
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[3577] | 191 | set_namelist namelist jpni 2 |
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| 192 | set_namelist namelist jpnj 2 |
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| 193 | set_namelist namelist jpnij 4 |
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[3520] | 194 | set_namelist namelist cn_ocerst_in \"GYRELOB_LONG_00000060_restart\" |
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[3577] | 195 | set_namelist namelist_top cn_trcrst_in \"GYRELOB_LONG_00000060_restart_trc\" |
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[3520] | 196 | set_namelist namelist_top ln_diatrc .false. |
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| 197 | set_namelist namelist_top ln_rsttr .true. |
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| 198 | set_namelist namelist_top nn_rsttr 2 |
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[3577] | 199 | for (( i=1; i<=$NPROC; i++)) ; do |
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| 200 | L_NPROC=$(( $i - 1 )) |
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| 201 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
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| 202 | ln -sf ../LONG/GYRELOB_LONG_00000060_restart_${L_NPROC}.nc . |
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| 203 | ln -sf ../LONG/GYRELOB_LONG_00000060_restart_trc_${L_NPROC}.nc . |
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| 204 | done |
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[3520] | 205 | cd ${SETTE_DIR} |
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[3577] | 206 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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[3520] | 207 | cd ${SETTE_DIR} |
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[3577] | 208 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
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[3520] | 209 | fi |
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| 210 | |
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| 211 | if [ ${config} -eq 2 ] ; then |
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[3577] | 212 | ## Repropducibility tests for GYRE_LOBSTER |
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[3520] | 213 | export TEST_NAME="REPRO_1_4" |
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| 214 | cd ${SETTE_DIR} |
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[3577] | 215 | . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRELOB_4 -r GYRE_LOBSTER add_key "key_mpp_mpi key_mpp_rep" |
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[3520] | 216 | cd ${SETTE_DIR} |
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| 217 | . param.cfg |
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| 218 | . all_functions.sh |
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| 219 | . prepare_exe_dir.sh |
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| 220 | JOB_FILE=${EXE_DIR}/run_job.sh |
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| 221 | NPROC=4 |
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[3577] | 222 | \rm ${JOB_FILE} |
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[3520] | 223 | cd ${EXE_DIR} |
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| 224 | set_namelist namelist cn_exp \"GYRELOB_14\" |
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| 225 | set_namelist namelist nn_it000 1 |
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| 226 | set_namelist namelist nn_itend 60 |
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| 227 | set_namelist namelist nn_fwb 0 |
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| 228 | set_namelist namelist nn_bench 0 |
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| 229 | set_namelist namelist ln_ctl .false. |
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| 230 | set_namelist namelist ln_clobber .true. |
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| 231 | set_namelist namelist nn_solv 2 |
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| 232 | set_namelist namelist_top ln_diatrc .false. |
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| 233 | set_namelist namelist_top ln_trcdta .false. |
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| 234 | set_namelist namelist jpni 1 |
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| 235 | set_namelist namelist jpnj 4 |
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| 236 | set_namelist namelist jpnij 4 |
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| 237 | cd ${SETTE_DIR} |
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| 238 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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| 239 | cd ${SETTE_DIR} |
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| 240 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
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| 241 | |
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| 242 | cd ${SETTE_DIR} |
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| 243 | export TEST_NAME="REPRO_2_2" |
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| 244 | . prepare_exe_dir.sh |
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| 245 | cd ${EXE_DIR} |
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| 246 | set_namelist namelist cn_exp \"GYRELOB_22\" |
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| 247 | set_namelist namelist nn_it000 1 |
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| 248 | set_namelist namelist nn_itend 60 |
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| 249 | set_namelist namelist nn_fwb 0 |
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| 250 | set_namelist namelist ln_ctl .false. |
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| 251 | set_namelist namelist ln_clobber .true. |
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| 252 | set_namelist namelist nn_solv 2 |
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| 253 | set_namelist namelist_top ln_diatrc .false. |
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| 254 | set_namelist namelist_top ln_trcdta .false. |
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| 255 | set_namelist namelist jpni 2 |
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| 256 | set_namelist namelist jpnj 2 |
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| 257 | set_namelist namelist jpnij 4 |
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| 258 | cd ${SETTE_DIR} |
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| 259 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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| 260 | cd ${SETTE_DIR} |
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| 261 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
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[3577] | 262 | |
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[3520] | 263 | fi |
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| 264 | |
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| 265 | # TESTS FOR ORCA2_LIM_PISCES CONFIGURATION |
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| 266 | if [ ${config} -eq 3 ] ; then |
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| 267 | ## Restartability tests for ORCA2_LIM_PISCES |
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| 268 | export TEST_NAME="LONG" |
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| 269 | cd ${SETTE_DIR} |
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[3577] | 270 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_LONG -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_mpi" |
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[3520] | 271 | cd ${SETTE_DIR} |
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| 272 | . param.cfg |
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| 273 | . all_functions.sh |
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| 274 | . prepare_exe_dir.sh |
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| 275 | JOB_FILE=${EXE_DIR}/run_job.sh |
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[3577] | 276 | NPROC=4 |
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| 277 | \rm ${JOB_FILE} |
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[3520] | 278 | cd ${EXE_DIR} |
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| 279 | set_namelist namelist cn_exp \"O2LP_LONG\" |
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| 280 | set_namelist namelist nn_it000 1 |
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| 281 | set_namelist namelist nn_itend 150 |
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| 282 | set_namelist namelist nn_stock 75 |
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| 283 | set_namelist namelist ln_clobber .true. |
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[3577] | 284 | set_namelist namelist jpni 2 |
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| 285 | set_namelist namelist jpnj 2 |
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| 286 | set_namelist namelist jpnij 4 |
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[3520] | 287 | set_namelist namelist nn_solv 2 |
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| 288 | set_namelist namelist_top ln_trcdta .false. |
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| 289 | set_namelist namelist_top ln_diatrc .false. |
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| 290 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
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| 291 | # if not you need input files, and for tests is not necessary |
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| 292 | set_namelist namelist_pisces ln_ironsed .false. |
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| 293 | set_namelist namelist_pisces ln_river .false. |
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| 294 | set_namelist namelist_pisces ln_ndepo .false. |
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| 295 | set_namelist namelist_pisces ln_dust .false. |
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| 296 | set_namelist namelist_pisces ln_presatm .false. |
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| 297 | cd ${SETTE_DIR} |
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[3577] | 298 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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| 299 | |
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[3520] | 300 | cd ${SETTE_DIR} |
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| 301 | export TEST_NAME="SHORT" |
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| 302 | . prepare_exe_dir.sh |
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| 303 | cd ${EXE_DIR} |
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| 304 | set_namelist namelist cn_exp \"O2LP_SHORT\" |
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| 305 | set_namelist namelist nn_it000 76 |
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| 306 | set_namelist namelist nn_itend 150 |
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| 307 | set_namelist namelist nn_stock 75 |
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| 308 | set_namelist namelist ln_rstart .true. |
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| 309 | set_namelist namelist nn_rstctl 2 |
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| 310 | set_namelist namelist ln_clobber .true. |
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[3577] | 311 | set_namelist namelist jpni 2 |
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| 312 | set_namelist namelist jpnj 2 |
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| 313 | set_namelist namelist jpnij 4 |
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[3520] | 314 | set_namelist namelist nn_solv 2 |
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| 315 | set_namelist namelist cn_ocerst_in \"O2LP_LONG_00000075_restart\" |
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| 316 | set_namelist namelist_ice cn_icerst_in \"O2LP_LONG_00000075_restart_ice\" |
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[3577] | 317 | set_namelist namelist_top cn_trcrst_in \"O2LP_LONG_00000075_restart_trc\" |
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[3520] | 318 | set_namelist namelist_top ln_diatrc .false. |
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| 319 | set_namelist namelist_top ln_rsttr .true. |
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| 320 | set_namelist namelist_top nn_rsttr 2 |
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| 321 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust |
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| 322 | # if not you need input files, and for tests is not necessary |
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| 323 | set_namelist namelist_pisces ln_ironsed .false. |
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| 324 | set_namelist namelist_pisces ln_river .false. |
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| 325 | set_namelist namelist_pisces ln_ndepo .false. |
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| 326 | set_namelist namelist_pisces ln_dust .false. |
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| 327 | set_namelist namelist_pisces ln_presatm .false. |
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[3577] | 328 | for (( i=1; i<=$NPROC; i++)) ; do |
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| 329 | L_NPROC=$(( $i - 1 )) |
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| 330 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
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| 331 | ln -sf ../LONG/O2LP_LONG_00000075_restart_${L_NPROC}.nc . |
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| 332 | ln -sf ../LONG/O2LP_LONG_00000075_restart_trc_${L_NPROC}.nc . |
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| 333 | ln -sf ../LONG/O2LP_LONG_00000075_restart_ice_${L_NPROC}.nc . |
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| 334 | done |
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[3520] | 335 | cd ${SETTE_DIR} |
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[3577] | 336 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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[3520] | 337 | cd ${SETTE_DIR} |
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[3577] | 338 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
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[3520] | 339 | fi |
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| 340 | |
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| 341 | if [ ${config} -eq 4 ] ; then |
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[3577] | 342 | ## Repropducibility tests for ORCA2_LIM_PISCES |
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[3520] | 343 | export TEST_NAME="REPRO_4_4" |
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| 344 | cd ${SETTE_DIR} |
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| 345 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_16 -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_rep key_mpp_mpi" |
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| 346 | cd ${SETTE_DIR} |
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| 347 | . param.cfg |
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| 348 | . all_functions.sh |
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| 349 | . prepare_exe_dir.sh |
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| 350 | JOB_FILE=${EXE_DIR}/run_job.sh |
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| 351 | NPROC=16 |
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| 352 | \rm $JOB_FILE |
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| 353 | cd ${EXE_DIR} |
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| 354 | set_namelist namelist nn_it000 1 |
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| 355 | set_namelist namelist nn_itend 75 |
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| 356 | set_namelist namelist nn_fwb 0 |
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[3577] | 357 | set_namelist namelist ln_ctl .false. |
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[3520] | 358 | set_namelist namelist ln_clobber .true. |
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| 359 | set_namelist namelist jpni 4 |
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| 360 | set_namelist namelist jpnj 4 |
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| 361 | set_namelist namelist jpnij 16 |
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| 362 | set_namelist namelist nn_solv 2 |
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| 363 | set_namelist namelist_top ln_trcdta .false. |
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| 364 | set_namelist namelist_top ln_diatrc .false. |
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| 365 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
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| 366 | # if not you need input files, and for tests is not necessary |
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| 367 | set_namelist namelist_pisces ln_ironsed .false. |
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| 368 | set_namelist namelist_pisces ln_river .false. |
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| 369 | set_namelist namelist_pisces ln_ndepo .false. |
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| 370 | set_namelist namelist_pisces ln_dust .false. |
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| 371 | set_namelist namelist_pisces ln_presatm .false. |
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| 372 | cd ${SETTE_DIR} |
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| 373 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
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| 374 | cd ${SETTE_DIR} |
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[3577] | 375 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
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[3520] | 376 | |
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| 377 | cd ${SETTE_DIR} |
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| 378 | export TEST_NAME="REPRO_2_8" |
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| 379 | . prepare_exe_dir.sh |
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| 380 | cd ${EXE_DIR} |
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| 381 | set_namelist namelist nn_it000 1 |
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| 382 | set_namelist namelist nn_itend 75 |
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| 383 | set_namelist namelist nn_fwb 0 |
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[3577] | 384 | set_namelist namelist ln_ctl .false. |
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[3520] | 385 | set_namelist namelist ln_clobber .true. |
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| 386 | set_namelist namelist jpni 2 |
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| 387 | set_namelist namelist jpnj 8 |
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| 388 | set_namelist namelist jpnij 16 |
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| 389 | set_namelist namelist nn_solv 2 |
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| 390 | set_namelist namelist_top ln_trcdta .false. |
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| 391 | set_namelist namelist_top ln_diatrc .false. |
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| 392 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
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| 393 | # if not you need input files, and for tests is not necessary |
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| 394 | set_namelist namelist_pisces ln_ironsed .false. |
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| 395 | set_namelist namelist_pisces ln_river .false. |
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| 396 | set_namelist namelist_pisces ln_ndepo .false. |
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| 397 | set_namelist namelist_pisces ln_dust .false. |
---|
| 398 | set_namelist namelist_pisces ln_presatm .false. |
---|
| 399 | cd ${SETTE_DIR} |
---|
| 400 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 401 | cd ${SETTE_DIR} |
---|
| 402 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
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| 403 | fi |
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| 404 | |
---|
| 405 | # TESTS FOR ORCA2_OFF_PISCES CONFIGURATION |
---|
| 406 | if [ ${config} -eq 5 ] ; then |
---|
| 407 | ## Restartability tests for ORCA2_OFF_PISCES |
---|
| 408 | export TEST_NAME="LONG" |
---|
| 409 | cd ${SETTE_DIR} |
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[3577] | 410 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_LONG -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_mpi key_mpp_rep" |
---|
[3520] | 411 | cd ${SETTE_DIR} |
---|
| 412 | . param.cfg |
---|
| 413 | . all_functions.sh |
---|
| 414 | . prepare_exe_dir.sh |
---|
| 415 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
[3577] | 416 | NPROC=4 |
---|
[3520] | 417 | \rm $JOB_FILE |
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| 418 | cd ${EXE_DIR} |
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| 419 | set_namelist namelist cn_exp \"OFFP_LONG\" |
---|
| 420 | set_namelist namelist nn_it000 1 |
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| 421 | set_namelist namelist nn_itend 40 |
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| 422 | set_namelist namelist nn_stock 20 |
---|
| 423 | set_namelist namelist ln_clobber .true. |
---|
[3577] | 424 | set_namelist namelist jpni 2 |
---|
| 425 | set_namelist namelist jpnj 2 |
---|
| 426 | set_namelist namelist jpnij 4 |
---|
[3520] | 427 | set_namelist namelist_top ln_trcdta .false. |
---|
| 428 | set_namelist namelist_top ln_diatrc .false. |
---|
| 429 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
| 430 | # if not you need input files, and for tests is not necessary |
---|
| 431 | set_namelist namelist_pisces ln_ironsed .false. |
---|
| 432 | set_namelist namelist_pisces ln_river .false. |
---|
| 433 | set_namelist namelist_pisces ln_ndepo .false. |
---|
| 434 | set_namelist namelist_pisces ln_dust .false. |
---|
| 435 | set_namelist namelist_pisces ln_presatm .false. |
---|
| 436 | cd ${SETTE_DIR} |
---|
| 437 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 438 | |
---|
| 439 | cd ${SETTE_DIR} |
---|
| 440 | export TEST_NAME="SHORT" |
---|
| 441 | . prepare_exe_dir.sh |
---|
[3577] | 442 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
| 443 | NPROC=4 |
---|
| 444 | \rm $JOB_FILE |
---|
[3520] | 445 | cd ${EXE_DIR} |
---|
| 446 | set_namelist namelist cn_exp \"OFFP_SHORT\" |
---|
| 447 | set_namelist namelist nn_it000 21 |
---|
| 448 | set_namelist namelist nn_itend 40 |
---|
| 449 | set_namelist namelist nn_stock 20 |
---|
| 450 | set_namelist namelist ln_clobber .true. |
---|
[3577] | 451 | set_namelist namelist jpni 2 |
---|
| 452 | set_namelist namelist jpnj 2 |
---|
| 453 | set_namelist namelist jpnij 4 |
---|
| 454 | cp ../LONG/OFFP_LONG_00000020_restart*nc . |
---|
[3520] | 455 | set_namelist namelist_top ln_diatrc .false. |
---|
| 456 | set_namelist namelist_top ln_rsttr .true. |
---|
| 457 | set_namelist namelist_top nn_rsttr 2 |
---|
| 458 | set_namelist namelist_top cn_trcrst_in \"OFFP_LONG_00000020_restart_trc\" |
---|
[3577] | 459 | for (( i=1; i<=$NPROC; i++)) ; do |
---|
| 460 | L_NPROC=$(( $i - 1 )) |
---|
| 461 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
---|
| 462 | ln -sf ../LONG/OFFP_LONG_00000020_restart_trc_${L_NPROC}.nc . |
---|
| 463 | done |
---|
[3520] | 464 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust |
---|
| 465 | # if not you need input files, and for tests is not necessary |
---|
| 466 | set_namelist namelist_pisces ln_ironsed .false. |
---|
| 467 | set_namelist namelist_pisces ln_river .false. |
---|
| 468 | set_namelist namelist_pisces ln_ndepo .false. |
---|
| 469 | set_namelist namelist_pisces ln_dust .false. |
---|
| 470 | set_namelist namelist_pisces ln_presatm .false. |
---|
| 471 | cd ${SETTE_DIR} |
---|
| 472 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 473 | cd ${SETTE_DIR} |
---|
| 474 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
| 475 | fi |
---|
| 476 | |
---|
| 477 | if [ ${config} -eq 6 ] ; then |
---|
[3577] | 478 | ## Repropducibility tests for ORCA2_OFF_PISCES |
---|
[3520] | 479 | export TEST_NAME="REPRO_4_4" |
---|
| 480 | cd ${SETTE_DIR} |
---|
| 481 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_16 -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_rep key_mpp_mpi" |
---|
| 482 | cd ${SETTE_DIR} |
---|
| 483 | . param.cfg |
---|
| 484 | . all_functions.sh |
---|
| 485 | . prepare_exe_dir.sh |
---|
| 486 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
| 487 | NPROC=16 |
---|
| 488 | \rm $JOB_FILE |
---|
| 489 | cd ${EXE_DIR} |
---|
| 490 | set_namelist namelist nn_it000 1 |
---|
| 491 | set_namelist namelist nn_itend 40 |
---|
[3577] | 492 | set_namelist namelist ln_ctl .false. |
---|
[3520] | 493 | set_namelist namelist ln_clobber .true. |
---|
| 494 | set_namelist namelist jpni 4 |
---|
| 495 | set_namelist namelist jpnj 4 |
---|
| 496 | set_namelist namelist jpnij 16 |
---|
| 497 | set_namelist namelist_top ln_trcdta .false. |
---|
| 498 | set_namelist namelist_top ln_diatrc .false. |
---|
| 499 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
| 500 | # if not you need input files, and for tests is not necessary |
---|
| 501 | set_namelist namelist_pisces ln_ironsed .false. |
---|
| 502 | set_namelist namelist_pisces ln_river .false. |
---|
| 503 | set_namelist namelist_pisces ln_ndepo .false. |
---|
| 504 | set_namelist namelist_pisces ln_dust .false. |
---|
| 505 | set_namelist namelist_pisces ln_presatm .false. |
---|
| 506 | cd ${SETTE_DIR} |
---|
| 507 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 508 | cd ${SETTE_DIR} |
---|
[3577] | 509 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
[3520] | 510 | |
---|
| 511 | cd ${SETTE_DIR} |
---|
| 512 | export TEST_NAME="REPRO_2_8" |
---|
| 513 | . prepare_exe_dir.sh |
---|
| 514 | cd ${EXE_DIR} |
---|
| 515 | set_namelist namelist nn_it000 1 |
---|
| 516 | set_namelist namelist nn_itend 40 |
---|
[3577] | 517 | set_namelist namelist ln_ctl .false. |
---|
[3520] | 518 | set_namelist namelist ln_clobber .true. |
---|
| 519 | set_namelist namelist jpni 2 |
---|
| 520 | set_namelist namelist jpnj 8 |
---|
| 521 | set_namelist namelist jpnij 16 |
---|
| 522 | set_namelist namelist_top ln_trcdta .false. |
---|
| 523 | set_namelist namelist_top ln_diatrc .false. |
---|
| 524 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
| 525 | # if not you need input files, and for tests is not necessary |
---|
| 526 | set_namelist namelist_pisces ln_ironsed .false. |
---|
| 527 | set_namelist namelist_pisces ln_river .false. |
---|
| 528 | set_namelist namelist_pisces ln_ndepo .false. |
---|
| 529 | set_namelist namelist_pisces ln_dust .false. |
---|
| 530 | set_namelist namelist_pisces ln_presatm .false. |
---|
| 531 | cd ${SETTE_DIR} |
---|
| 532 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 533 | cd ${SETTE_DIR} |
---|
| 534 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
| 535 | fi |
---|
| 536 | |
---|
| 537 | if [ ${config} -eq 7 ] ; then |
---|
[3577] | 538 | ## Restartability tests for AMM12 |
---|
| 539 | export TEST_NAME="LONG" |
---|
[3520] | 540 | cd ${SETTE_DIR} |
---|
[3577] | 541 | . ../CONFIG/makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 |
---|
[3520] | 542 | cd ${SETTE_DIR} |
---|
| 543 | . param.cfg |
---|
| 544 | . all_functions.sh |
---|
| 545 | . prepare_exe_dir.sh |
---|
| 546 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
| 547 | NPROC=32 |
---|
| 548 | \rm $JOB_FILE |
---|
| 549 | cd ${EXE_DIR} |
---|
| 550 | set_namelist namelist nn_it000 1 |
---|
[3577] | 551 | set_namelist namelist nn_itend 12 |
---|
| 552 | set_namelist namelist nn_stock 6 |
---|
[3520] | 553 | set_namelist namelist nn_fwb 0 |
---|
| 554 | set_namelist namelist ln_ctl .false. |
---|
| 555 | set_namelist namelist ln_clobber .true. |
---|
| 556 | set_namelist namelist nn_dyn2d 2 |
---|
| 557 | set_namelist namelist nn_tra_dta 0 |
---|
| 558 | set_namelist namelist jpni 8 |
---|
| 559 | set_namelist namelist jpnj 4 |
---|
| 560 | set_namelist namelist jpnij 32 |
---|
| 561 | cd ${SETTE_DIR} |
---|
| 562 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 563 | |
---|
| 564 | cd ${SETTE_DIR} |
---|
[3577] | 565 | export TEST_NAME="SHORT" |
---|
[3520] | 566 | . prepare_exe_dir.sh |
---|
| 567 | cd ${EXE_DIR} |
---|
[3577] | 568 | set_namelist namelist nn_it000 7 |
---|
| 569 | set_namelist namelist nn_itend 12 |
---|
[3520] | 570 | set_namelist namelist nn_fwb 0 |
---|
| 571 | set_namelist namelist ln_ctl .false. |
---|
[3577] | 572 | set_namelist namelist ln_clobber .true. |
---|
[3520] | 573 | set_namelist namelist nn_dyn2d 2 |
---|
| 574 | set_namelist namelist nn_tra_dta 0 |
---|
[3577] | 575 | set_namelist namelist jpni 8 |
---|
| 576 | set_namelist namelist jpnj 4 |
---|
[3520] | 577 | set_namelist namelist jpnij 32 |
---|
[3577] | 578 | set_namelist namelist ln_rstart .true. |
---|
| 579 | set_namelist namelist nn_rstctl 2 |
---|
| 580 | set_namelist namelist cn_ocerst_in \"AMM12_00000006_restart\" |
---|
| 581 | for (( i=1; i<=$NPROC; i++)) ; do |
---|
| 582 | L_NPROC=$(( $i - 1 )) |
---|
| 583 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
---|
| 584 | ln -sf ../LONG/AMM12_00000006_restart_${L_NPROC}.nc . |
---|
| 585 | done |
---|
[3520] | 586 | cd ${SETTE_DIR} |
---|
| 587 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 588 | cd ${SETTE_DIR} |
---|
[3577] | 589 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
[3520] | 590 | fi |
---|
| 591 | |
---|
| 592 | if [ ${config} -eq 8 ] ; then |
---|
[3577] | 593 | ## Reproducibility tests for AMM12 |
---|
| 594 | export TEST_NAME="REPO_8_4" |
---|
[3520] | 595 | cd ${SETTE_DIR} |
---|
[3577] | 596 | . ../CONFIG/makenemo -m ${CMP_NAM} -n AMM12_32 -r AMM12 add_key "key_mpp_rep" |
---|
[3520] | 597 | cd ${SETTE_DIR} |
---|
| 598 | . param.cfg |
---|
| 599 | . all_functions.sh |
---|
| 600 | . prepare_exe_dir.sh |
---|
| 601 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
| 602 | NPROC=32 |
---|
[3577] | 603 | \rm ${JOB_FILE} |
---|
[3520] | 604 | cd ${EXE_DIR} |
---|
| 605 | set_namelist namelist nn_it000 1 |
---|
[3577] | 606 | set_namelist namelist nn_itend 576 |
---|
[3520] | 607 | set_namelist namelist nn_fwb 0 |
---|
| 608 | set_namelist namelist ln_ctl .false. |
---|
| 609 | set_namelist namelist ln_clobber .true. |
---|
| 610 | set_namelist namelist nn_dyn2d 2 |
---|
| 611 | set_namelist namelist nn_tra_dta 0 |
---|
| 612 | set_namelist namelist jpni 8 |
---|
| 613 | set_namelist namelist jpnj 4 |
---|
| 614 | set_namelist namelist jpnij 32 |
---|
| 615 | cd ${SETTE_DIR} |
---|
| 616 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 617 | cd ${SETTE_DIR} |
---|
| 618 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
| 619 | |
---|
| 620 | cd ${SETTE_DIR} |
---|
[3577] | 621 | export TEST_NAME="REPO_4_8" |
---|
[3520] | 622 | . prepare_exe_dir.sh |
---|
| 623 | cd ${EXE_DIR} |
---|
[3577] | 624 | set_namelist namelist nn_it000 1 |
---|
| 625 | set_namelist namelist nn_itend 576 |
---|
[3520] | 626 | set_namelist namelist nn_fwb 0 |
---|
| 627 | set_namelist namelist ln_ctl .false. |
---|
| 628 | set_namelist namelist nn_dyn2d 2 |
---|
| 629 | set_namelist namelist nn_tra_dta 0 |
---|
[3577] | 630 | set_namelist namelist ln_clobber .true. |
---|
| 631 | set_namelist namelist jpni 4 |
---|
| 632 | set_namelist namelist jpnj 8 |
---|
[3520] | 633 | set_namelist namelist jpnij 32 |
---|
| 634 | cd ${SETTE_DIR} |
---|
| 635 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 636 | cd ${SETTE_DIR} |
---|
[3577] | 637 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
[3520] | 638 | fi |
---|
| 639 | |
---|
| 640 | # TEST FOR ORCA2_LIM_AGRIF : simple test of running AGRIF (no restartability neither reproducibility tests) |
---|
| 641 | if [ ${config} -eq 9 ] ; then |
---|
| 642 | ## ORCA2_LIM with Agulhas AGRIF zoom in MPI |
---|
| 643 | export TEST_NAME="SHORT" |
---|
| 644 | cd ${SETTE_DIR} |
---|
| 645 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM -j 8 add_key "key_mpp_rep key_mpp_mpi key_agrif" del_key "key_zdftmx" |
---|
| 646 | cd ${SETTE_DIR} |
---|
| 647 | . param.cfg |
---|
| 648 | . all_functions.sh |
---|
| 649 | . prepare_exe_dir.sh |
---|
| 650 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
| 651 | NPROC=2 |
---|
[3577] | 652 | \rm ${JOB_FILE} |
---|
[3520] | 653 | cd ${EXE_DIR} |
---|
| 654 | set_namelist namelist nn_it000 1 |
---|
| 655 | set_namelist namelist nn_itend 75 |
---|
| 656 | set_namelist namelist ln_ctl .false. |
---|
| 657 | set_namelist namelist ln_clobber .true. |
---|
| 658 | set_namelist namelist jpni 1 |
---|
| 659 | set_namelist namelist jpnj 2 |
---|
| 660 | set_namelist namelist jpnij 2 |
---|
| 661 | set_namelist 1_namelist nn_it000 1 |
---|
| 662 | set_namelist 1_namelist nn_itend 150 |
---|
| 663 | set_namelist 1_namelist ln_ctl .false. |
---|
| 664 | set_namelist 1_namelist ln_clobber .true. |
---|
| 665 | cd ${SETTE_DIR} |
---|
| 666 | . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
| 667 | cd ${SETTE_DIR} |
---|
[3577] | 668 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
[3520] | 669 | fi |
---|
| 670 | |
---|
| 671 | done |
---|