[3251] | 1 | #!/bin/bash |
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| 2 | #! |
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| 3 | #PBS -N sette |
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| 4 | #PBS -e sette.$PBS_JOBID.err |
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| 5 | #PBS -o sette.$PBS_JOBID.out |
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[3665] | 6 | #PBS -l nodes=NODES:ppn=NPROC_NODE |
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[3651] | 7 | #PBS -q QUEUE |
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[3251] | 8 | #PBS -l walltime=03:00:00 |
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[3665] | 9 | #PBS -l pvmem=5gb |
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[3251] | 10 | |
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| 11 | # |
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| 12 | # Test specific settings. Do not hand edit these lines; the fcm_job.sh script will set these |
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| 13 | # (via sed operating on this template job file). |
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| 14 | # |
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| 15 | OCEANCORES=NPROCS |
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| 16 | export SETTE_DIR=DEF_SETTE_DIR |
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| 17 | |
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| 18 | ############################################################### |
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| 19 | # |
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| 20 | # set up mpp computing environment |
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| 21 | # |
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| 22 | # Local settings for machine IBM Power6 (VARGAS at IDRIS France) |
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| 23 | # |
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[3651] | 24 | #cbr export MPIRUN="mpiexec -n $OCEANCORES" |
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| 25 | export MPIRUN="mpirun -np $OCEANCORES" |
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[3251] | 26 | |
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| 27 | # |
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| 28 | # load sette functions (only post_test_tidyup needed) |
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| 29 | # |
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| 30 | . ${SETTE_DIR}/all_functions.sh |
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| 31 | # |
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| 32 | |
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| 33 | # Don't remove neither change the following line |
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| 34 | # BODY |
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| 35 | |
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| 36 | # |
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| 37 | # These variables are needed by post_test_tidyup function in all_functions.sh |
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| 38 | # |
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| 39 | export EXE_DIR=DEF_EXE_DIR |
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| 40 | export INPUT_DIR=DEF_INPUT_DIR |
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| 41 | export CONFIG_DIR=DEF_CONFIG_DIR |
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| 42 | export NEMO_VALIDATION_DIR=DEF_NEMO_VALIDATION |
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| 43 | export NEW_CONF=DEF_NEW_CONF |
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| 44 | export CMP_NAM=DEF_CMP_NAM |
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| 45 | export TEST_NAME=DEF_TEST_NAME |
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| 46 | # |
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| 47 | # end of set up |
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| 48 | ############################################################### |
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| 49 | # |
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| 50 | # change to the working directory |
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| 51 | # |
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| 52 | cd ${EXE_DIR} |
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| 53 | echo Running on host `hostname` |
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| 54 | echo Time is `date` |
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| 55 | echo Directory is `pwd` |
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| 56 | # |
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| 57 | # Run the parallel MPI executable |
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| 58 | # |
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[3651] | 59 | echo "Running time ${MPIRUN} ./opa" |
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| 60 | # |
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[3608] | 61 | if [ MPI_FLAG == "yes" ]; then |
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[3651] | 62 | mpirun -np $OCEANCORES ./opa |
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[3251] | 63 | else |
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| 64 | time ./opa |
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| 65 | fi |
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| 66 | |
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| 67 | # |
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| 68 | post_test_tidyup |
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| 69 | |
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| 70 | # END_BODY |
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| 71 | # Don't remove neither change the previous line |
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| 72 | |
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| 73 | |
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| 74 | exit |
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