1 | ##################################################### |
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2 | # Author : Simona Flavoni for NEMO |
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3 | # Contact : sflod@locean-ipsl.upmc.fr |
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4 | # |
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5 | # Some scripts called by sette.sh |
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6 | # fcm_job.sh : simple job to run NEMO with fcm |
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7 | ###################################################### |
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8 | #set -x |
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9 | set -o posix |
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10 | #set -u |
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11 | #set -e |
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12 | #+ |
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13 | # |
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14 | # ================ |
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15 | # fcm_job.sh |
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16 | # ================ |
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17 | # |
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18 | # -------------------------- |
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19 | # Simple job for NEMO tests |
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20 | # -------------------------- |
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21 | # |
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22 | # SYNOPSIS |
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23 | # ======== |
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24 | # |
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25 | # :: |
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26 | # |
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27 | # $ ./fcm_job.sh INPUT_FILE_CONFIG_NAME NUMBER_PROC TEST_NAME MPI_INTERACT MPI_FLAG |
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28 | # |
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29 | # |
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30 | # DESCRIPTION |
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31 | # =========== |
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32 | # |
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33 | # Simple job for SET TESTS for NEMO (SETTE) |
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34 | # |
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35 | # get input files (if needed) : tar file |
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36 | # (note this job needs to have an input_CONFIG.cfg in which can be found input tar file name) |
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37 | # |
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38 | # runs job in interactive or batch mode : all jobs using 1 process are run interactive, and all MPP jobs are |
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39 | # |
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40 | # run in batch (MPI_INTERACT="no") or interactive (MPI_INTERACT="yes") see sette.sh and BATCH_TEMPLATE directory |
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41 | # |
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42 | # and call post_test_tidyup function (that moves in NEMO_VALIDATION_DIR solver.stat, tracer.stat (for LOBSTER & PISCES) & ocean.output) |
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43 | # |
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44 | # EXAMPLES |
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45 | # ======== |
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46 | # |
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47 | # :: |
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48 | # |
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49 | # $ ./fcm_job.sh INPUT_FILE_CONFIG_NAME NUMBER_PROC TEST_NAME MPI_INTERACT MPI_FLAG |
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50 | # |
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51 | # run a job of config GYRE with 1 processor SHORT test ( 5 days ) using an interactive run without mpirun |
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52 | # $ ./fcm_job.sh input_GYRE.cfg 1 SHORT yes no |
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53 | # |
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54 | # run a job of config ORCA2_LIM_PISCES with 8 processors test RESTARTABILITY submitting the job to the batch queue system and using mpirun |
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55 | # $ ./fcm_job.sh input_ORCA2_LIM_PISCES.cfg 8 LONG no yes |
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56 | # |
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57 | # |
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58 | # TODO |
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59 | # ==== |
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60 | # |
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61 | # option debug |
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62 | # |
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63 | # |
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64 | # EVOLUTIONS |
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65 | # ========== |
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66 | # |
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67 | # $Id$ |
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68 | # |
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69 | # |
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70 | # |
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71 | # * creation |
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72 | # |
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73 | #- |
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74 | # |
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75 | |
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76 | usage=" Usage : ./fcm_job.sh input_CONFIG_NAME.cfg NUMBER_OF_PROCS TEST_NAME INTERACT MPI_FLAG" |
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77 | usage=" example : ./fcm_job.sh input_ORCA2_LIM_PISCES.cfg 8 SHORT no/yes no/yes" |
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78 | |
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79 | |
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80 | minargcount=2 |
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81 | if [ ${#} -lt ${minargcount} ] |
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82 | then |
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83 | echo "not enought arguments for fcm_job.sh script" |
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84 | echo "control number of argument of fcm_job.sh in sette.sh" |
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85 | echo "${usage}" |
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86 | exit 1 |
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87 | fi |
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88 | unset minargcount |
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89 | if [ ! -f ${SETTE_DIR}/output.sette ] ; then |
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90 | touch ${SETTE_DIR}/output.sette |
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91 | fi |
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92 | |
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93 | |
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94 | export NB_PROCS=$1 |
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95 | export JOB_FILE=$2 |
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96 | ################################################################ |
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97 | # RUN OPA |
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98 | cd ${EXE_DIR} |
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99 | |
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100 | # submit job to batch system |
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101 | if [ ${NB_PROC} -eq 1 ]; then |
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102 | eval ${BATCH_COMMAND_SEQ} $JOB_FILE |
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103 | else |
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104 | eval ${BATCH_COMMAND_PAR} $JOB_FILE |
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105 | fi |
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106 | |
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