1 | #!/bin/bash |
---|
2 | ############################################################ |
---|
3 | # Author : Simona Flavoni for NEMO |
---|
4 | # Contact : sflod@locean-ipsl.upmc.fr |
---|
5 | # |
---|
6 | # sette.sh : principal script of SET TEsts for NEMO (SETTE) |
---|
7 | # ---------------------------------------------------------------------- |
---|
8 | # NEMO/SETTE , NEMO Consortium (2010) |
---|
9 | # Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
---|
10 | # ---------------------------------------------------------------------- |
---|
11 | # |
---|
12 | ############################################################# |
---|
13 | #set -x |
---|
14 | set -o posix |
---|
15 | #set -u |
---|
16 | #set -e |
---|
17 | #+ |
---|
18 | # |
---|
19 | # ================ |
---|
20 | # sette.sh |
---|
21 | # ================ |
---|
22 | # |
---|
23 | # ---------------------------------------------- |
---|
24 | # Set of tests for NEMO |
---|
25 | # ---------------------------------------------- |
---|
26 | # |
---|
27 | # SYNOPSIS |
---|
28 | # ======== |
---|
29 | # |
---|
30 | # :: |
---|
31 | # |
---|
32 | # $ ./sette.sh |
---|
33 | # |
---|
34 | # DESCRIPTION |
---|
35 | # =========== |
---|
36 | # |
---|
37 | # Variables to be checked by user: |
---|
38 | # |
---|
39 | # COMPILER : name of compiler as defined in NEMOGCM/ARCH directory |
---|
40 | # |
---|
41 | # BATCH_COMMAND : name of the command for batch submission |
---|
42 | # |
---|
43 | # INTERACT_FLAG : flag to run in interactive mode "yes" |
---|
44 | # to run in batch mode "no" |
---|
45 | # |
---|
46 | # MPIRUN_FLAG : flag to run in parallel (MPI) "yes" |
---|
47 | # to run in sequential mode (NB_PROC = 1) "no" |
---|
48 | # |
---|
49 | # Principal script is sette.sh, that calls |
---|
50 | # |
---|
51 | # makenemo |
---|
52 | # |
---|
53 | # creates the exectuable in ${CONFIG_NAME}/BLD/bin/nemo.exe (and its link opa in ${CONFIG_NAME}/EXP00) |
---|
54 | # |
---|
55 | # param.cfg : sets and loads following directories: |
---|
56 | # |
---|
57 | # FORCING_DIR : is the directory for forcing files (tarfile) |
---|
58 | # |
---|
59 | # INPUT_DIR : is the directory for input files storing |
---|
60 | # |
---|
61 | # TMPDIR : is the temporary directory (if needed) |
---|
62 | # |
---|
63 | # NEMO_VALIDATION_DIR : is the validation directory |
---|
64 | # |
---|
65 | # (NOTE: this file is the same for all configrations to be tested with sette) |
---|
66 | # |
---|
67 | # |
---|
68 | # all_functions.sh : loads functions used by sette (note: new functions can be added here) |
---|
69 | # |
---|
70 | # set_namelist : function declared in all_functions that set namelist parameters for tests |
---|
71 | # |
---|
72 | # post_test_tidyup : creates validation storage directory and copy needed output files (solver.stat and ocean.output) in it after execution of test. |
---|
73 | # |
---|
74 | # Tree of VALIDATION is: |
---|
75 | # |
---|
76 | # NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE) |
---|
77 | # |
---|
78 | # |
---|
79 | # prepare_exe_dir.sh : defines and creates directory where the test is executed |
---|
80 | # |
---|
81 | # execution directory takes name of TEST_NAME defined in every test in sette.sh |
---|
82 | # |
---|
83 | # ( each test in executed in its own directory ) |
---|
84 | # |
---|
85 | # |
---|
86 | # prepare_job.sh |
---|
87 | # |
---|
88 | # to generate the script run_job.sh |
---|
89 | # |
---|
90 | # fcm_job.sh |
---|
91 | # |
---|
92 | # run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes") see sette.sh and BATCH_TEMPLATE directory |
---|
93 | # |
---|
94 | # (note this job needs to have an input_CONFIG.cfg in which can be found input tar file) |
---|
95 | # |
---|
96 | # NOTE: if job is not launched for some problems you have executable ready in ${EXE_DIR} directory |
---|
97 | # |
---|
98 | # NOTE: the changed namelists are leaved in ${EXE_DIR} directory whereas original namelist remains in ${NEW_CONF}/EXP00 |
---|
99 | # |
---|
100 | # in ${SETTE_DIR} is created output.sette with the echo of executed commands |
---|
101 | # |
---|
102 | # if sette.sh is stopped in output.sette there is written the last command executed by sette.sh |
---|
103 | # |
---|
104 | # if you run: ./sette.sh 2>&1 | tee out.sette |
---|
105 | # |
---|
106 | # in ${SETTE_DIR} out.sette is redirected standard error & standard output |
---|
107 | # |
---|
108 | # |
---|
109 | # EXAMPLES |
---|
110 | # ======== |
---|
111 | # |
---|
112 | # :: |
---|
113 | # |
---|
114 | # $ ./sette.sh |
---|
115 | # |
---|
116 | # |
---|
117 | # TODO |
---|
118 | # ==== |
---|
119 | # |
---|
120 | # option debug |
---|
121 | # |
---|
122 | # EVOLUTIONS |
---|
123 | # ========== |
---|
124 | # |
---|
125 | # $Id$ |
---|
126 | # |
---|
127 | # * creation |
---|
128 | # |
---|
129 | #- |
---|
130 | # |
---|
131 | #- |
---|
132 | # Compiler among those in NEMOGCM/ARCH |
---|
133 | COMPILER=PW6_VARGAS |
---|
134 | export BATCH_COMMAND_PAR="llsubmit" |
---|
135 | export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR |
---|
136 | export INTERACT_FLAG="no" |
---|
137 | export MPIRUN_FLAG="yes" |
---|
138 | # IF YOU DON'T WANT TO USE XIOS : (this is a list of keys to be delete) |
---|
139 | export KEY_XIOS="key_iomput" |
---|
140 | # IF YOU WANT TO USE XIOS : |
---|
141 | #export KEY_XIOS="" |
---|
142 | |
---|
143 | |
---|
144 | # Directory to run the tests |
---|
145 | SETTE_DIR=$(cd $(dirname "$0"); pwd) |
---|
146 | MAIN_DIR=${SETTE_DIR%/SETTE} |
---|
147 | CONFIG_DIR=${MAIN_DIR}/CONFIG |
---|
148 | TOOLS_DIR=${MAIN_DIR}/TOOLS |
---|
149 | COMPIL_DIR=${TOOLS_DIR}/COMPILE |
---|
150 | |
---|
151 | CMP_NAM=${1:-$COMPILER} |
---|
152 | # Copy job_batch_COMPILER file for specific compiler into job_batch_template |
---|
153 | cd ${SETTE_DIR} |
---|
154 | cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit |
---|
155 | |
---|
156 | for config in 1 2 3 4 5 6 7 8 9 |
---|
157 | do |
---|
158 | |
---|
159 | # TESTS FOR GYRE CONFIGURATION |
---|
160 | if [ ${config} -eq 1 ] ; then |
---|
161 | ## Restartability tests for GYRE |
---|
162 | export TEST_NAME="LONG" |
---|
163 | cd ${SETTE_DIR} |
---|
164 | . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_LONG -r GYRE -j 8 add_key "key_mpp_mpi" del_key ${KEY_XIOS} |
---|
165 | cd ${SETTE_DIR} |
---|
166 | . param.cfg |
---|
167 | . all_functions.sh |
---|
168 | . prepare_exe_dir.sh |
---|
169 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
170 | NPROC=4 |
---|
171 | \rm ${JOB_FILE} |
---|
172 | cd ${EXE_DIR} |
---|
173 | set_namelist namelist cn_exp \"GYRE_LONG\" |
---|
174 | set_namelist namelist nn_it000 1 |
---|
175 | set_namelist namelist nn_itend 120 |
---|
176 | set_namelist namelist nn_stock 60 |
---|
177 | set_namelist namelist ln_clobber .true. |
---|
178 | set_namelist namelist nn_solv 2 |
---|
179 | set_namelist namelist jpni 2 |
---|
180 | set_namelist namelist jpnj 2 |
---|
181 | set_namelist namelist jpnij 4 |
---|
182 | cd ${SETTE_DIR} |
---|
183 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
184 | |
---|
185 | cd ${SETTE_DIR} |
---|
186 | export TEST_NAME="SHORT" |
---|
187 | . prepare_exe_dir.sh |
---|
188 | cd ${EXE_DIR} |
---|
189 | set_namelist namelist cn_exp \"GYRE_SHORT\" |
---|
190 | set_namelist namelist nn_it000 61 |
---|
191 | set_namelist namelist nn_itend 120 |
---|
192 | set_namelist namelist nn_stock 60 |
---|
193 | set_namelist namelist ln_rstart .true. |
---|
194 | set_namelist namelist nn_rstctl 2 |
---|
195 | set_namelist namelist ln_clobber .true. |
---|
196 | set_namelist namelist nn_solv 2 |
---|
197 | set_namelist namelist jpni 2 |
---|
198 | set_namelist namelist jpnj 2 |
---|
199 | set_namelist namelist jpnij 4 |
---|
200 | set_namelist namelist cn_ocerst_in \"GYRE_LONG_00000060_restart\" |
---|
201 | for (( i=1; i<=$NPROC; i++)) ; do |
---|
202 | L_NPROC=$(( $i - 1 )) |
---|
203 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
---|
204 | ln -sf ../LONG/GYRE_LONG_00000060_restart_${L_NPROC}.nc . |
---|
205 | done |
---|
206 | cd ${SETTE_DIR} |
---|
207 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
208 | cd ${SETTE_DIR} |
---|
209 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
210 | fi |
---|
211 | |
---|
212 | if [ ${config} -eq 2 ] ; then |
---|
213 | ## Reproducibility tests for GYRE |
---|
214 | export TEST_NAME="REPRO_1_4" |
---|
215 | cd ${SETTE_DIR} |
---|
216 | . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_4 -r GYRE -j 8 add_key "key_mpp_mpi key_mpp_rep" del_key ${KEY_XIOS} |
---|
217 | cd ${SETTE_DIR} |
---|
218 | . param.cfg |
---|
219 | . all_functions.sh |
---|
220 | . prepare_exe_dir.sh |
---|
221 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
222 | NPROC=4 |
---|
223 | \rm ${JOB_FILE} |
---|
224 | cd ${EXE_DIR} |
---|
225 | set_namelist namelist cn_exp \"GYRE_14\" |
---|
226 | set_namelist namelist nn_it000 1 |
---|
227 | set_namelist namelist nn_itend 60 |
---|
228 | set_namelist namelist nn_fwb 0 |
---|
229 | set_namelist namelist nn_bench 0 |
---|
230 | set_namelist namelist ln_ctl .false. |
---|
231 | set_namelist namelist ln_clobber .true. |
---|
232 | set_namelist namelist nn_solv 2 |
---|
233 | set_namelist namelist jpni 1 |
---|
234 | set_namelist namelist jpnj 4 |
---|
235 | set_namelist namelist jpnij 4 |
---|
236 | cd ${SETTE_DIR} |
---|
237 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
238 | cd ${SETTE_DIR} |
---|
239 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
240 | |
---|
241 | cd ${SETTE_DIR} |
---|
242 | export TEST_NAME="REPRO_2_2" |
---|
243 | . prepare_exe_dir.sh |
---|
244 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
245 | NPROC=4 |
---|
246 | \rm $JOB_FILE |
---|
247 | cd ${EXE_DIR} |
---|
248 | set_namelist namelist cn_exp \"GYRE_22\" |
---|
249 | set_namelist namelist nn_it000 1 |
---|
250 | set_namelist namelist nn_itend 60 |
---|
251 | set_namelist namelist nn_fwb 0 |
---|
252 | set_namelist namelist ln_ctl .false. |
---|
253 | set_namelist namelist ln_clobber .true. |
---|
254 | set_namelist namelist nn_solv 2 |
---|
255 | set_namelist namelist jpni 2 |
---|
256 | set_namelist namelist jpnj 2 |
---|
257 | set_namelist namelist jpnij 4 |
---|
258 | cd ${SETTE_DIR} |
---|
259 | . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
260 | cd ${SETTE_DIR} |
---|
261 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
262 | |
---|
263 | fi |
---|
264 | |
---|
265 | # TESTS FOR ORCA2_LIM_PISCES CONFIGURATION |
---|
266 | if [ ${config} -eq 3 ] ; then |
---|
267 | ## Restartability tests for ORCA2_LIM_PISCES |
---|
268 | export TEST_NAME="LONG" |
---|
269 | cd ${SETTE_DIR} |
---|
270 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_LONG -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_mpi" del_key ${KEY_XIOS} |
---|
271 | cd ${SETTE_DIR} |
---|
272 | . param.cfg |
---|
273 | . all_functions.sh |
---|
274 | . prepare_exe_dir.sh |
---|
275 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
276 | NPROC=4 |
---|
277 | \rm ${JOB_FILE} |
---|
278 | cd ${EXE_DIR} |
---|
279 | set_namelist namelist cn_exp \"O2LP_LONG\" |
---|
280 | set_namelist namelist nn_it000 1 |
---|
281 | set_namelist namelist nn_itend 150 |
---|
282 | set_namelist namelist nn_stock 75 |
---|
283 | set_namelist namelist ln_clobber .true. |
---|
284 | set_namelist namelist jpni 2 |
---|
285 | set_namelist namelist jpnj 2 |
---|
286 | set_namelist namelist jpnij 4 |
---|
287 | set_namelist namelist nn_solv 2 |
---|
288 | set_namelist namelist_top ln_trcdta .false. |
---|
289 | set_namelist namelist_top ln_diatrc .false. |
---|
290 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
291 | # if not you need input files, and for tests is not necessary |
---|
292 | set_namelist namelist_pisces ln_presatm .false. |
---|
293 | set_namelist namelist_pisces ln_varpar .false. |
---|
294 | set_namelist namelist_pisces ln_dust .false. |
---|
295 | set_namelist namelist_pisces ln_solub .false. |
---|
296 | set_namelist namelist_pisces ln_river .false. |
---|
297 | set_namelist namelist_pisces ln_ndepo .false. |
---|
298 | set_namelist namelist_pisces ln_ironsed .false. |
---|
299 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
300 | cd ${SETTE_DIR} |
---|
301 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
302 | |
---|
303 | cd ${SETTE_DIR} |
---|
304 | export TEST_NAME="SHORT" |
---|
305 | . prepare_exe_dir.sh |
---|
306 | cd ${EXE_DIR} |
---|
307 | set_namelist namelist cn_exp \"O2LP_SHORT\" |
---|
308 | set_namelist namelist nn_it000 76 |
---|
309 | set_namelist namelist nn_itend 150 |
---|
310 | set_namelist namelist nn_stock 75 |
---|
311 | set_namelist namelist ln_rstart .true. |
---|
312 | set_namelist namelist nn_rstctl 2 |
---|
313 | set_namelist namelist ln_clobber .true. |
---|
314 | set_namelist namelist jpni 2 |
---|
315 | set_namelist namelist jpnj 2 |
---|
316 | set_namelist namelist jpnij 4 |
---|
317 | set_namelist namelist nn_solv 2 |
---|
318 | set_namelist namelist_top ln_diatrc .false. |
---|
319 | set_namelist namelist_top ln_rsttr .true. |
---|
320 | set_namelist namelist_top nn_rsttr 2 |
---|
321 | set_namelist namelist cn_ocerst_in \"O2LP_LONG_00000075_restart\" |
---|
322 | set_namelist namelist_ice cn_icerst_in \"O2LP_LONG_00000075_restart_ice\" |
---|
323 | set_namelist namelist_top cn_trcrst_in \"O2LP_LONG_00000075_restart_trc\" |
---|
324 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust |
---|
325 | # if not you need input files, and for tests is not necessary |
---|
326 | set_namelist namelist_pisces ln_presatm .false. |
---|
327 | set_namelist namelist_pisces ln_varpar .false. |
---|
328 | set_namelist namelist_pisces ln_dust .false. |
---|
329 | set_namelist namelist_pisces ln_solub .false. |
---|
330 | set_namelist namelist_pisces ln_river .false. |
---|
331 | set_namelist namelist_pisces ln_ndepo .false. |
---|
332 | set_namelist namelist_pisces ln_ironsed .false. |
---|
333 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
334 | # put ln_pisdmp to false : no restoring to global mean value |
---|
335 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
336 | for (( i=1; i<=$NPROC; i++)) ; do |
---|
337 | L_NPROC=$(( $i - 1 )) |
---|
338 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
---|
339 | ln -sf ../LONG/O2LP_LONG_00000075_restart_${L_NPROC}.nc . |
---|
340 | ln -sf ../LONG/O2LP_LONG_00000075_restart_trc_${L_NPROC}.nc . |
---|
341 | ln -sf ../LONG/O2LP_LONG_00000075_restart_ice_${L_NPROC}.nc . |
---|
342 | done |
---|
343 | cd ${SETTE_DIR} |
---|
344 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
345 | cd ${SETTE_DIR} |
---|
346 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
347 | fi |
---|
348 | |
---|
349 | if [ ${config} -eq 4 ] ; then |
---|
350 | ## Reproducibility tests for ORCA2_LIM_PISCES |
---|
351 | export TEST_NAME="REPRO_4_4" |
---|
352 | cd ${SETTE_DIR} |
---|
353 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_16 -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_mpi key_mpp_rep" del_key ${KEY_XIOS} |
---|
354 | cd ${SETTE_DIR} |
---|
355 | . param.cfg |
---|
356 | . all_functions.sh |
---|
357 | . prepare_exe_dir.sh |
---|
358 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
359 | NPROC=16 |
---|
360 | \rm $JOB_FILE |
---|
361 | cd ${EXE_DIR} |
---|
362 | set_namelist namelist nn_it000 1 |
---|
363 | set_namelist namelist nn_itend 75 |
---|
364 | set_namelist namelist nn_fwb 0 |
---|
365 | set_namelist namelist ln_ctl .false. |
---|
366 | set_namelist namelist ln_clobber .true. |
---|
367 | set_namelist namelist jpni 4 |
---|
368 | set_namelist namelist jpnj 4 |
---|
369 | set_namelist namelist jpnij 16 |
---|
370 | set_namelist namelist nn_solv 2 |
---|
371 | set_namelist namelist_top ln_trcdta .false. |
---|
372 | set_namelist namelist_top ln_diatrc .false. |
---|
373 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
374 | # if not you need input files, and for tests is not necessary |
---|
375 | set_namelist namelist_pisces ln_presatm .false. |
---|
376 | set_namelist namelist_pisces ln_varpar .false. |
---|
377 | set_namelist namelist_pisces ln_dust .false. |
---|
378 | set_namelist namelist_pisces ln_solub .false. |
---|
379 | set_namelist namelist_pisces ln_river .false. |
---|
380 | set_namelist namelist_pisces ln_ndepo .false. |
---|
381 | set_namelist namelist_pisces ln_ironsed .false. |
---|
382 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
383 | # put ln_pisdmp to false : no restoring to global mean value |
---|
384 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
385 | cd ${SETTE_DIR} |
---|
386 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
387 | cd ${SETTE_DIR} |
---|
388 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
389 | |
---|
390 | cd ${SETTE_DIR} |
---|
391 | export TEST_NAME="REPRO_2_8" |
---|
392 | . prepare_exe_dir.sh |
---|
393 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
394 | NPROC=16 |
---|
395 | \rm $JOB_FILE |
---|
396 | cd ${EXE_DIR} |
---|
397 | set_namelist namelist nn_it000 1 |
---|
398 | set_namelist namelist nn_itend 75 |
---|
399 | set_namelist namelist nn_fwb 0 |
---|
400 | set_namelist namelist ln_clobber .true. |
---|
401 | set_namelist namelist jpni 2 |
---|
402 | set_namelist namelist jpnj 8 |
---|
403 | set_namelist namelist jpnij 16 |
---|
404 | set_namelist namelist nn_solv 2 |
---|
405 | set_namelist namelist_top ln_trcdta .false. |
---|
406 | set_namelist namelist_top ln_diatrc .false. |
---|
407 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
408 | # if not you need input files, and for tests is not necessary |
---|
409 | set_namelist namelist_pisces ln_presatm .false. |
---|
410 | set_namelist namelist_pisces ln_varpar .false. |
---|
411 | set_namelist namelist_pisces ln_dust .false. |
---|
412 | set_namelist namelist_pisces ln_solub .false. |
---|
413 | set_namelist namelist_pisces ln_river .false. |
---|
414 | set_namelist namelist_pisces ln_ndepo .false. |
---|
415 | set_namelist namelist_pisces ln_ironsed .false. |
---|
416 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
417 | # put ln_pisdmp to false : no restoring to global mean value |
---|
418 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
419 | cd ${SETTE_DIR} |
---|
420 | . ./prepare_job.sh input_ORCA2_LIM_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
421 | cd ${SETTE_DIR} |
---|
422 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
423 | fi |
---|
424 | |
---|
425 | # TESTS FOR ORCA2_OFF_PISCES CONFIGURATION |
---|
426 | if [ ${config} -eq 5 ] ; then |
---|
427 | ## Restartability tests for ORCA2_OFF_PISCES |
---|
428 | export TEST_NAME="LONG" |
---|
429 | cd ${SETTE_DIR} |
---|
430 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_LONG -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_mpi key_mpp_rep" del_key ${KEY_XIOS} |
---|
431 | cd ${SETTE_DIR} |
---|
432 | . param.cfg |
---|
433 | . all_functions.sh |
---|
434 | . prepare_exe_dir.sh |
---|
435 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
436 | NPROC=4 |
---|
437 | \rm $JOB_FILE |
---|
438 | cd ${EXE_DIR} |
---|
439 | set_namelist namelist cn_exp \"OFFP_LONG\" |
---|
440 | set_namelist namelist nn_it000 1 |
---|
441 | set_namelist namelist nn_itend 40 |
---|
442 | set_namelist namelist nn_stock 20 |
---|
443 | set_namelist namelist ln_clobber .true. |
---|
444 | set_namelist namelist jpni 2 |
---|
445 | set_namelist namelist jpnj 2 |
---|
446 | set_namelist namelist jpnij 4 |
---|
447 | set_namelist namelist_top ln_trcdta .false. |
---|
448 | set_namelist namelist_top ln_diatrc .false. |
---|
449 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
450 | # if not you need input files, and for tests is not necessary |
---|
451 | set_namelist namelist_pisces ln_presatm .false. |
---|
452 | set_namelist namelist_pisces ln_varpar .false. |
---|
453 | set_namelist namelist_pisces ln_dust .false. |
---|
454 | set_namelist namelist_pisces ln_solub .false. |
---|
455 | set_namelist namelist_pisces ln_river .false. |
---|
456 | set_namelist namelist_pisces ln_ndepo .false. |
---|
457 | set_namelist namelist_pisces ln_ironsed .false. |
---|
458 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
459 | # put ln_pisdmp to false : no restoring to global mean value |
---|
460 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
461 | cd ${SETTE_DIR} |
---|
462 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
463 | |
---|
464 | cd ${SETTE_DIR} |
---|
465 | export TEST_NAME="SHORT" |
---|
466 | . prepare_exe_dir.sh |
---|
467 | cd ${EXE_DIR} |
---|
468 | set_namelist namelist cn_exp \"OFFP_SHORT\" |
---|
469 | set_namelist namelist nn_it000 21 |
---|
470 | set_namelist namelist nn_itend 40 |
---|
471 | set_namelist namelist nn_stock 20 |
---|
472 | set_namelist namelist ln_clobber .true. |
---|
473 | set_namelist namelist jpni 2 |
---|
474 | set_namelist namelist jpnj 2 |
---|
475 | set_namelist namelist jpnij 4 |
---|
476 | set_namelist namelist_top ln_diatrc .false. |
---|
477 | set_namelist namelist_top ln_rsttr .true. |
---|
478 | set_namelist namelist_top nn_rsttr 2 |
---|
479 | set_namelist namelist_top cn_trcrst_in \"OFFP_LONG_00000020_restart_trc\" |
---|
480 | for (( i=1; i<=$NPROC; i++)) ; do |
---|
481 | L_NPROC=$(( $i - 1 )) |
---|
482 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
---|
483 | ln -sf ../LONG/OFFP_LONG_00000020_restart_trc_${L_NPROC}.nc . |
---|
484 | done |
---|
485 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust |
---|
486 | # if not you need input files, and for tests is not necessary |
---|
487 | set_namelist namelist_pisces ln_presatm .false. |
---|
488 | set_namelist namelist_pisces ln_varpar .false. |
---|
489 | set_namelist namelist_pisces ln_dust .false. |
---|
490 | set_namelist namelist_pisces ln_solub .false. |
---|
491 | set_namelist namelist_pisces ln_river .false. |
---|
492 | set_namelist namelist_pisces ln_ndepo .false. |
---|
493 | set_namelist namelist_pisces ln_ironsed .false. |
---|
494 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
495 | # put ln_pisdmp to false : no restoring to global mean value |
---|
496 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
497 | cd ${SETTE_DIR} |
---|
498 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
499 | cd ${SETTE_DIR} |
---|
500 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
501 | fi |
---|
502 | |
---|
503 | if [ ${config} -eq 6 ] ; then |
---|
504 | ## Reproducibility tests for ORCA2_OFF_PISCES |
---|
505 | export TEST_NAME="REPRO_4_4" |
---|
506 | cd ${SETTE_DIR} |
---|
507 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_16 -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_mpi key_mpp_rep" del_key ${KEY_XIOS} |
---|
508 | cd ${SETTE_DIR} |
---|
509 | . param.cfg |
---|
510 | . all_functions.sh |
---|
511 | . prepare_exe_dir.sh |
---|
512 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
513 | NPROC=16 |
---|
514 | \rm $JOB_FILE |
---|
515 | cd ${EXE_DIR} |
---|
516 | set_namelist namelist nn_it000 1 |
---|
517 | set_namelist namelist nn_itend 40 |
---|
518 | set_namelist namelist ln_ctl .false. |
---|
519 | set_namelist namelist ln_clobber .true. |
---|
520 | set_namelist namelist jpni 4 |
---|
521 | set_namelist namelist jpnj 4 |
---|
522 | set_namelist namelist jpnij 16 |
---|
523 | set_namelist namelist_top ln_trcdta .false. |
---|
524 | set_namelist namelist_top ln_diatrc .false. |
---|
525 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
526 | # if not you need input files, and for tests is not necessary |
---|
527 | set_namelist namelist_pisces ln_presatm .false. |
---|
528 | set_namelist namelist_pisces ln_varpar .false. |
---|
529 | set_namelist namelist_pisces ln_dust .false. |
---|
530 | set_namelist namelist_pisces ln_solub .false. |
---|
531 | set_namelist namelist_pisces ln_river .false. |
---|
532 | set_namelist namelist_pisces ln_ndepo .false. |
---|
533 | set_namelist namelist_pisces ln_ironsed .false. |
---|
534 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
535 | # put ln_pisdmp to false : no restoring to global mean value |
---|
536 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
537 | cd ${SETTE_DIR} |
---|
538 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
539 | cd ${SETTE_DIR} |
---|
540 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
541 | |
---|
542 | cd ${SETTE_DIR} |
---|
543 | export TEST_NAME="REPRO_2_8" |
---|
544 | . prepare_exe_dir.sh |
---|
545 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
546 | NPROC=16 |
---|
547 | \rm $JOB_FILE |
---|
548 | cd ${EXE_DIR} |
---|
549 | set_namelist namelist nn_it000 1 |
---|
550 | set_namelist namelist nn_itend 40 |
---|
551 | set_namelist namelist ln_ctl .false. |
---|
552 | set_namelist namelist ln_clobber .true. |
---|
553 | set_namelist namelist jpni 2 |
---|
554 | set_namelist namelist jpnj 8 |
---|
555 | set_namelist namelist jpnij 16 |
---|
556 | set_namelist namelist_top ln_trcdta .false. |
---|
557 | set_namelist namelist_top ln_diatrc .false. |
---|
558 | # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false |
---|
559 | # if not you need input files, and for tests is not necessary |
---|
560 | set_namelist namelist_pisces ln_presatm .false. |
---|
561 | set_namelist namelist_pisces ln_varpar .false. |
---|
562 | set_namelist namelist_pisces ln_dust .false. |
---|
563 | set_namelist namelist_pisces ln_solub .false. |
---|
564 | set_namelist namelist_pisces ln_river .false. |
---|
565 | set_namelist namelist_pisces ln_ndepo .false. |
---|
566 | set_namelist namelist_pisces ln_ironsed .false. |
---|
567 | set_namelist namelist_pisces ln_hydrofe .false. |
---|
568 | # put ln_pisdmp to false : no restoring to global mean value |
---|
569 | set_namelist namelist_pisces ln_pisdmp .false. |
---|
570 | cd ${SETTE_DIR} |
---|
571 | . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
572 | cd ${SETTE_DIR} |
---|
573 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
574 | fi |
---|
575 | |
---|
576 | # TESTS FOR AMM12 CONFIGURATION |
---|
577 | if [ ${config} -eq 7 ] ; then |
---|
578 | ## Restartability tests for AMM12 |
---|
579 | export TEST_NAME="LONG" |
---|
580 | cd ${SETTE_DIR} |
---|
581 | . ../CONFIG/makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 add_key "key_tide" del_key ${KEY_XIOS} |
---|
582 | cd ${SETTE_DIR} |
---|
583 | . param.cfg |
---|
584 | . all_functions.sh |
---|
585 | . prepare_exe_dir.sh |
---|
586 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
587 | NPROC=32 |
---|
588 | \rm $JOB_FILE |
---|
589 | cd ${EXE_DIR} |
---|
590 | set_namelist namelist nn_it000 1 |
---|
591 | set_namelist namelist nn_itend 12 |
---|
592 | set_namelist namelist nn_stock 6 |
---|
593 | set_namelist namelist nn_fwb 0 |
---|
594 | set_namelist namelist ln_ctl .false. |
---|
595 | set_namelist namelist ln_clobber .true. |
---|
596 | set_namelist namelist nn_dyn2d 2 |
---|
597 | set_namelist namelist nn_tra_dta 0 |
---|
598 | set_namelist namelist cn_ocerst_in \"amm12.restart_20070101\" |
---|
599 | set_namelist namelist jpni 8 |
---|
600 | set_namelist namelist jpnj 4 |
---|
601 | set_namelist namelist jpnij 32 |
---|
602 | cd ${SETTE_DIR} |
---|
603 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
604 | |
---|
605 | cd ${SETTE_DIR} |
---|
606 | export TEST_NAME="SHORT" |
---|
607 | . prepare_exe_dir.sh |
---|
608 | cd ${EXE_DIR} |
---|
609 | set_namelist namelist nn_it000 7 |
---|
610 | set_namelist namelist nn_itend 12 |
---|
611 | set_namelist namelist nn_fwb 0 |
---|
612 | set_namelist namelist ln_ctl .false. |
---|
613 | set_namelist namelist ln_clobber .true. |
---|
614 | set_namelist namelist nn_dyn2d 2 |
---|
615 | set_namelist namelist nn_tra_dta 0 |
---|
616 | set_namelist namelist jpni 8 |
---|
617 | set_namelist namelist jpnj 4 |
---|
618 | set_namelist namelist jpnij 32 |
---|
619 | set_namelist namelist ln_rstart .true. |
---|
620 | set_namelist namelist nn_rstctl 2 |
---|
621 | set_namelist namelist cn_ocerst_in \"AMM12_00000006_restart\" |
---|
622 | for (( i=1; i<=$NPROC; i++)) ; do |
---|
623 | L_NPROC=$(( $i - 1 )) |
---|
624 | L_NPROC=`printf "%04d\n" ${L_NPROC}` |
---|
625 | ln -sf ../LONG/AMM12_00000006_restart_${L_NPROC}.nc . |
---|
626 | done |
---|
627 | cd ${SETTE_DIR} |
---|
628 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
629 | cd ${SETTE_DIR} |
---|
630 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
631 | fi |
---|
632 | |
---|
633 | if [ ${config} -eq 8 ] ; then |
---|
634 | ## Reproducibility tests for AMM12 |
---|
635 | export TEST_NAME="REPRO_8_4" |
---|
636 | cd ${SETTE_DIR} |
---|
637 | . ../CONFIG/makenemo -m ${CMP_NAM} -n AMM12_32 -r AMM12 -j 8 add_key "key_mpp_rep key_tide" del_key ${KEY_XIOS} |
---|
638 | cd ${SETTE_DIR} |
---|
639 | . param.cfg |
---|
640 | . all_functions.sh |
---|
641 | . prepare_exe_dir.sh |
---|
642 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
643 | NPROC=32 |
---|
644 | \rm ${JOB_FILE} |
---|
645 | cd ${EXE_DIR} |
---|
646 | set_namelist namelist nn_it000 1 |
---|
647 | set_namelist namelist nn_itend 576 |
---|
648 | set_namelist namelist nn_fwb 0 |
---|
649 | set_namelist namelist ln_ctl .false. |
---|
650 | set_namelist namelist ln_clobber .true. |
---|
651 | set_namelist namelist nn_dyn2d 2 |
---|
652 | set_namelist namelist nn_tra_dta 0 |
---|
653 | set_namelist namelist cn_ocerst_in \"amm12.restart_20070101\" |
---|
654 | set_namelist namelist jpni 8 |
---|
655 | set_namelist namelist jpnj 4 |
---|
656 | set_namelist namelist jpnij 32 |
---|
657 | cd ${SETTE_DIR} |
---|
658 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
659 | cd ${SETTE_DIR} |
---|
660 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
661 | |
---|
662 | cd ${SETTE_DIR} |
---|
663 | export TEST_NAME="REPRO_4_8" |
---|
664 | . prepare_exe_dir.sh |
---|
665 | cd ${EXE_DIR} |
---|
666 | set_namelist namelist nn_it000 1 |
---|
667 | set_namelist namelist nn_itend 576 |
---|
668 | set_namelist namelist nn_fwb 0 |
---|
669 | set_namelist namelist ln_ctl .false. |
---|
670 | set_namelist namelist nn_dyn2d 2 |
---|
671 | set_namelist namelist nn_tra_dta 0 |
---|
672 | set_namelist namelist ln_clobber .true. |
---|
673 | set_namelist namelist cn_ocerst_in \"amm12.restart_20070101\" |
---|
674 | set_namelist namelist jpni 4 |
---|
675 | set_namelist namelist jpnj 8 |
---|
676 | set_namelist namelist jpnij 32 |
---|
677 | cd ${SETTE_DIR} |
---|
678 | . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
679 | cd ${SETTE_DIR} |
---|
680 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
681 | fi |
---|
682 | |
---|
683 | # TEST FOR ORCA2_LIM_AGRIF : simple test of running AGRIF (no restartability neither reproducibility tests) |
---|
684 | if [ ${config} -eq 9 ] ; then |
---|
685 | ## ORCA2_LIM with Agulhas AGRIF zoom in MPI |
---|
686 | export TEST_NAME="SHORT" |
---|
687 | cd ${SETTE_DIR} |
---|
688 | . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM -j 8 add_key "key_mpp_mpi key_mpp_rep key_agrif" del_key "key_zdftmx" del_key ${KEY_XIOS} |
---|
689 | cd ${SETTE_DIR} |
---|
690 | . param.cfg |
---|
691 | . all_functions.sh |
---|
692 | . prepare_exe_dir.sh |
---|
693 | JOB_FILE=${EXE_DIR}/run_job.sh |
---|
694 | NPROC=2 |
---|
695 | \rm ${JOB_FILE} |
---|
696 | cd ${EXE_DIR} |
---|
697 | set_namelist namelist nn_it000 1 |
---|
698 | set_namelist namelist nn_itend 75 |
---|
699 | set_namelist namelist ln_ctl .false. |
---|
700 | set_namelist namelist ln_clobber .true. |
---|
701 | set_namelist namelist jpni 1 |
---|
702 | set_namelist namelist jpnj 2 |
---|
703 | set_namelist namelist jpnij 2 |
---|
704 | set_namelist 1_namelist nn_it000 1 |
---|
705 | set_namelist 1_namelist nn_itend 150 |
---|
706 | set_namelist 1_namelist ln_ctl .false. |
---|
707 | set_namelist 1_namelist ln_clobber .true. |
---|
708 | cd ${SETTE_DIR} |
---|
709 | . ./prepare_job.sh input_ORCA2_LIM_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} |
---|
710 | cd ${SETTE_DIR} |
---|
711 | . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG} |
---|
712 | fi |
---|
713 | |
---|
714 | done |
---|