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iodef.xml in branches/2014/dev_r4650_UKMO10_Tidally_Meaned_Diagnostics/NEMOGCM/CONFIG/AMM12/EXP00 – NEMO

source: branches/2014/dev_r4650_UKMO10_Tidally_Meaned_Diagnostics/NEMOGCM/CONFIG/AMM12/EXP00/iodef.xml @ 4756

Last change on this file since 4756 was 4756, checked in by deazer, 10 years ago

Added two new routines, diatmb and dia25h to handle 25hourly and tmb output.
modified diawri to call these routines when logicals are true
logicals are set by new namelist addition set to true in AMM12 cfg and false in reference
default should be false.
additional call in dynspg_ts for barotropic U and V
Created extra fields in field_def.xml and extrae file groups in iodef.xml
File size: 13.1 KB
RevLine 
[2921]1<?xml version="1.0"?>
2<simulation> 
[3695]3
[4147]4 <context id="nemo" time_origin="1950-01-01 00:00:00" >
[2921]5   
6    <!-- $id$ -->
7   
8    <!--
9============================================================================================================
10=                                  definition of all existing variables                                    =
11=                                            DO NOT CHANGE                                                 =
12============================================================================================================
13    -->
[3695]14    <field_definition src="./field_def.xml"/>
[2921]15    <!--
16============================================================================================================
17=                                           output files definition                                        =
18=                                            Define your own files                                         =
19=                                         put the variables you want...                                    =
20============================================================================================================
21    -->
22   
[4148]23    <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4">
[3695]24   
[4148]25      <file_group id="1ts" output_freq="1ts"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
26
[4756]27<!--old      <file_group id="1h" output_freq="1h"  output_level="10" enabled=".TRUE."/> old --> <!-- 1h files --> 
28   <!-- TMB files -->
29      <file_group id="1h" output_freq="1h"  output_level="10" enabled=".TRUE."  >                     
30
31   <file id="file9" name_suffix="_shelftmb_grid_T" description="ocean T grid variables" enabled=".TRUE." >
32     <field field_ref="top_temp"           name="votemper_top"  freq_op="3600" operation="instant" enabled=".TRUE." />
33     <field field_ref="mid_temp"           name="votemper_mid"  freq_op="3600" operation="instant" enabled=".TRUE." />
34     <field field_ref="bot_temp"           name="votemper_bot"  freq_op="3600" operation="instant" enabled=".TRUE." />
35     <field field_ref="sshnmasked"         name="sossheig"      freq_op="3600" operation="instant" enabled=".TRUE." /> 
36     <field field_ref="top_sal"            name="vosaline_top"  freq_op="3600" operation="instant" enabled=".TRUE." />
37     <field field_ref="mid_sal"            name="vosaline_mid"  freq_op="3600" operation="instant" enabled=".TRUE." />
38     <field field_ref="bot_sal"            name="vosaline_bot"  freq_op="3600" operation="instant" enabled=".TRUE." />
39   </file>
40
41   <file id="file10" name_suffix="_shelftmb_grid_U" description="TMB ocean U grid variables" enabled=".TRUE." >
42     <field field_ref="top_u"         name="vozocrtx_top"  freq_op="3600" operation="instant" />
43     <field field_ref="mid_u"         name="vozocrtx_mid"  freq_op="3600" operation="instant" />
44     <field field_ref="bot_u"         name="vozocrtx_bot"  freq_op="3600" operation="instant" />
45     <field field_ref="baro_u"        name="vobtcrtx"      freq_op="3600" operation="instant" />
46   </file>
47
48   <file id="file11" name_suffix="_shelftmb_grid_V" description="TMB ocean V grid variables" enabled=".TRUE." >
49     <field field_ref="top_v"         name="vomecrty_top"  freq_op="3600" operation="instant" />
50     <field field_ref="mid_v"         name="vomecrty_mid"  freq_op="3600" operation="instant" />
51     <field field_ref="bot_v"         name="vomecrty_bot"  freq_op="3600" operation="instant" />
52     <field field_ref="baro_v"        name="vobtcrty"      freq_op="3600" operation="instant" />
53   </file>
54
55      </file_group>
56
[3695]57      <file_group id="2h" output_freq="2h"  output_level="10" enabled=".TRUE."/> <!-- 2h files -->
58      <file_group id="3h" output_freq="3h"  output_level="10" enabled=".TRUE."/> <!-- 3h files -->     
59      <file_group id="4h" output_freq="4h"  output_level="10" enabled=".TRUE."/> <!-- 4h files -->
60      <file_group id="6h" output_freq="6h"  output_level="10" enabled=".TRUE."/> <!-- 6h files -->
[4756]61
62      <file_group id="25h_mean" output_freq="1d" output_level="10" enabled=".TRUE.">
63
64
65     <file id="file12" name_suffix="_25hourm_grid_T" description="ocean T grid variables, 25h meaned" enabled=".TRUE." >
66     <field field_ref="temper25h"   name="votemper" freq_op="86400" operation="instant" enabled=".TRUE."/>
67     <field field_ref="tempis25h"   name="votempis" freq_op="86400" operation="instant" enabled=".TRUE."/>
68     <field field_ref="salin25h"    name="vosaline" freq_op="86400" operation="instant" enabled=".TRUE."/>
69     <field field_ref="ssh25h"      name="sossheig" freq_op="86400" operation="instant" enabled=".TRUE."/>
70    </file>
71
72     <file id="file13" name_suffix="_25hourm_grid_U" description="ocean U grid variables, 25h meaned" enabled=".TRUE." >
73     <field field_ref="vozocrtx25h" name="vozocrtx" freq_op="86400" operation="instant" enabled=".TRUE."/>
74    </file>
75
76     <file id="file14" name_suffix="_25hourm_grid_V" description="ocean V grid variables, 25h meaned" enabled=".TRUE." >
77     <field field_ref="vomecrty25h" name="vomecrty" freq_op="86400" operation="instant" enabled=".TRUE."/>
78    </file>
79
80     <file id="file15" name_suffix="_25hourm_grid_W" description="ocean W grid variables, 25h meaned" enabled=".TRUE." >
81     <field field_ref="vomecrtz25h"          name="vomerctz" freq_op="86400" operation="instant" enabled=".TRUE."/>
82     <field field_ref="woce"                 name="vovecrtz" freq_op="86400" operation="instant" enabled=".TRUE."/>
83     <field field_ref="avt25h"               name="votkeavt" freq_op="86400" operation="instant" enabled=".TRUE."/>
84     <field field_ref="avm25h"               name="votkeavm" freq_op="86400" operation="instant" enabled=".TRUE."/>
85     <field field_ref="tke25h"               name="votke" freq_op="86400" operation="instant" enabled=".TRUE."/>
86     <field field_ref="mxln25h"              name="mxln"  freq_op="86400" operation="instant" enabled=".TRUE."/>
87    </file>
88      </file_group>
[3695]89     
90      <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE."> <!-- 1d files -->
[4147]91
[4343]92   <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" >
[4756]93     <field field_ref="sshnmasked"         name="sossheig"      freq_op="3600" operation="instant" enabled=".TRUE." /> 
[4147]94     <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                       />
95     <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                          />
96     <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                />
97   </file>
98
[4343]99   <file id="file2" name_suffix="_grid_U" description="ocean U grid variables" >
[4147]100     <field field_ref="suoce"        name="uos"     long_name="sea_surface_x_velocity"    />
101   </file>
102   
[4343]103   <file id="file3" name_suffix="_grid_V" description="ocean V grid variables" >
[4147]104     <field field_ref="svoce"        name="vos"     long_name="sea_surface_y_velocity"    />
105   </file>
106   
[3695]107      </file_group>
108      <file_group id="3d" output_freq="3d"  output_level="10" enabled=".TRUE."/> <!-- 3d files -->   
[4147]109
[3695]110      <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE.">  <!-- 5d files -->   
[4147]111
[4343]112   <file id="file4" name_suffix="_grid_T" description="ocean T grid variables" >
[4147]113     <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"               />
114     <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                            />
115     <field field_ref="sst"          name="tos"      long_name="sea_surface_temperature"                       />
116     <field field_ref="sst2"         name="tossq"    long_name="square_of_sea_surface_temperature"             />
117     <field field_ref="sss"          name="sos"      long_name="sea_surface_salinity"                          />
118     <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"                />
119     <field field_ref="ssh2"         name="zossq"    long_name="square_of_sea_surface_height_above_geoid"      />
120     <field field_ref="empmr"        name="wfo"      long_name="water_flux_into_sea_water"                     />
121     <field field_ref="qsr"          name="rsntds"   long_name="surface_net_downward_shortwave_flux"           />
122     <field field_ref="qt"           name="tohfls"   long_name="surface_net_downward_total_heat_flux"          />
123     <field field_ref="taum"         />
124     <field field_ref="mldkz5"       />
125     <field field_ref="mldr10_1"     />
126   </file>
127   
[4343]128   <file id="file5" name_suffix="_grid_U" description="ocean U grid variables" >
[4147]129     <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity"      />
130     <field field_ref="suoce"        name="uos"     long_name="sea_surface_x_velocity"    />
131     <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" />
132   </file>
133   
[4343]134   <file id="file6" name_suffix="_grid_V" description="ocean V grid variables" >
[4147]135     <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity"      />
136     <field field_ref="svoce"        name="vos"     long_name="sea_surface_y_velocity"    />
137     <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" />
138   </file>
139   
[4343]140   <file id="file7" name_suffix="_grid_W" description="ocean W grid variables" >
[4147]141     <field field_ref="woce"         name="wo"      long_name="ocean vertical velocity"         />
142     <field field_ref="avt"          name="difvho"  long_name="ocean_vertical_heat_diffusivity" />
143   </file>
144   
[4343]145   <file id="file8" name_suffix="_icemod" description="ice variables" >
[4147]146     <field field_ref="ice_pres"                     />
147     <field field_ref="snowthic_cea" name="snd"     long_name="surface_snow_thickness"   />
148     <field field_ref="icethic_cea"  name="sit"     long_name="sea_ice_thickness"        />
149     <field field_ref="iceprod_cea"  name="sip"     long_name="sea_ice_thickness"        />
150     <field field_ref="ist_ipa"      />
151     <field field_ref="ioceflxb"     />
152     <field field_ref="uice_ipa"     />
153     <field field_ref="vice_ipa"     />
154     <field field_ref="utau_ice"     />
155     <field field_ref="vtau_ice"     />
156     <field field_ref="qsr_io_cea"   />
157     <field field_ref="qns_io_cea"   />
158     <field field_ref="snowpre"      />
159   </file>
160   
[3695]161      </file_group>
[2921]162
[3695]163      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
164      <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
165      <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
166      <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
167      <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
[2921]168
[3695]169      <file_group id="1y"  output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
170      <file_group id="2y"  output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
171      <file_group id="5y"  output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
172      <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
[2921]173
[4756]174
[3695]175   </file_definition>
[2921]176   
177    <!--
178============================================================================================================
[3695]179= grid definition = = DO NOT CHANGE =
[2921]180============================================================================================================
181    -->
182   
[3695]183   <axis_definition> 
[3771]184      <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" />
185      <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" />
186      <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" />
187      <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" />
[3695]188      <axis id="nfloat" long_name="Float number"      unit="-"  />
[4153]189      <axis id="icbcla" long_name="Iceberg class"     unit="-"  />
[3695]190   </axis_definition> 
[2921]191   
[3695]192   <domain_definition src="./domain_def.xml"/>
193   
[3771]194   <grid_definition>   
195     <grid id="grid_T_2D" domain_ref="grid_T"/>
196     <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/>
197     <grid id="grid_U_2D" domain_ref="grid_U"/>
198     <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/>
199     <grid id="grid_V_2D" domain_ref="grid_V"/>
200     <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/>
201     <grid id="grid_W_2D" domain_ref="grid_W"/>
202     <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/>
[4147]203    </grid_definition>   
[2921]204  </context>
[3695]205 
[2921]206
[3695]207  <context id="xios">
[2921]208
[3695]209      <variable_definition>
[2921]210   
[3695]211     <!--
212        We must have buffer_size > jpi*jpj*jpk*8 (with jpi and jpj the subdomain size)
213-->
214     <variable id="buffer_size"               type="integer">10000000</variable>
215     <variable id="buffer_server_factor_size" type="integer">2</variable>
216     <variable id="info_level"                type="integer">0</variable>
[3709]217     <variable id="using_server"              type="boolean">false</variable>
[3695]218     <variable id="using_oasis"               type="boolean">false</variable>
219     <variable id="oasis_codes_id"            type="string" >oceanx</variable>
[2921]220   
[3695]221      </variable_definition>
222               
[2921]223  </context>
[3695]224 
[2921]225</simulation>
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