| 1 | #!/bin/bash |
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| 2 | |
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| 3 | |
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| 4 | ##-------------------------------------------------------------------------------- |
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| 5 | ## Messenger filenames |
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| 6 | ##-------------------------------------------------------------------------------- |
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| 7 | |
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| 8 | file_date=mesg_01_date.txt ; file_rslt=mesg_02_result.txt |
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| 9 | file_stat=mesg_03_status.txt; file_nemo=mesg_04_nemo.txt |
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| 10 | file_xios=mesg_05_xios.txt ; file_cmpf=mesg_06_compiler.txt |
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| 11 | file_lmpi=mesg_07_mpi.txt ; file_ncdf=mesg_08_netcdf.txt |
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| 12 | file_inpt=mesg_09_inputs.txt; file_time=mesg_10_time.txt |
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| 13 | file_memy=mesg_11_memory.txt; file_note=mesg_12_comments.txt |
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| 14 | |
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| 15 | |
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| 16 | ##-------------------------------------------------------------------------------- |
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| 17 | ## Functions in order of use |
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| 18 | ##-------------------------------------------------------------------------------- |
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| 19 | |
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| 20 | step() { |
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| 21 | local char_nb=$( echo "$1" | wc -c ) |
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| 22 | local outline=$( printf "%${char_nb}s" ) |
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| 23 | |
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| 24 | printf "\n%s\n%s\n\n" "$1" ${outline// /-} |
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| 25 | } |
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| 26 | |
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| 27 | |
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| 28 | ## |
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| 29 | ##-------------------------------------------------------------------------------- |
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| 30 | |
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| 31 | init() { |
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| 32 | mkdir -p ${TRUST_TEST_DIR} ${TRUST_TEST_BENCHMARK} || get_out B |
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| 33 | cd ${TRUST_TEST_DIR} |
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| 34 | echo ${TRUST_TEST_DIR} |
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| 35 | |
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| 36 | echo 'Date' > ${file_date}; echo 'Result' > ${file_rslt} |
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| 37 | echo 'Status' > ${file_stat}; echo 'NEMOGCM' > ${file_nemo} |
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| 38 | echo 'XIOS' > ${file_xios}; echo 'Fortran' > ${file_cmpf} |
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| 39 | echo 'MPI' > ${file_lmpi}; echo 'NetCDF' > ${file_ncdf} |
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| 40 | echo 'Inputs' > ${file_inpt}; echo 'Time' > ${file_time} |
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| 41 | echo 'RAM (Phy./Virt.)' > ${file_memy}; echo 'Comments' > ${file_note} |
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| 42 | |
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| 43 | ## 'FAILED' status with 'Unknown error' by default |
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| 44 | echo ${TRUST_FLAG_RESULT} \ |
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| 45 | >> ${file_rslt} |
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| 46 | echo 'Unknown error' \ |
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| 47 | >> ${file_stat} |
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| 48 | |
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| 49 | ## UTC time zone for timestamping |
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| 50 | local dat=$( date -ud "${TRUST_TEST_DATE}" +"%F %R %Z" ) |
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| 51 | |
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| 52 | echo $dat \ |
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| 53 | >> ${file_date} |
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| 54 | } |
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| 55 | |
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| 56 | |
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| 57 | ## |
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| 58 | ##-------------------------------------------------------------------------------- |
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| 59 | |
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| 60 | get_nemo_rev() { |
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| 61 | local dir rev_loc |
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| 62 | local rev=0 |
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| 63 | |
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| 64 | ## Loop on essential NEMO directories |
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| 65 | for dir in ${TRUST_SVN_UP}; do |
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| 66 | |
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| 67 | echo $dir && ${TRUST_SVN_ACTION} ${TRUST_SVN_NEMOGCM}/$dir || get_out C |
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| 68 | rev_loc=$( svn info ${TRUST_SVN_NEMOGCM}/$dir \ |
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| 69 | | awk '/Last Changed Rev/ {print $NF}' ) |
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| 70 | |
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| 71 | ## Keep last rev. nb |
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| 72 | [ ${rev_loc} -gt $rev ] && rev=${rev_loc} |
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| 73 | done |
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| 74 | |
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| 75 | echo 'NEMOGCM '$rev \ |
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| 76 | >> model.log |
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| 77 | echo "<a href=\"${TRUST_SVN_REPO}/nemo/changeset/$rev\" target=\"_blank\">$rev</a>" \ |
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| 78 | >> ${file_nemo} |
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| 79 | } |
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| 80 | |
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| 81 | |
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| 82 | ## |
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| 83 | ##-------------------------------------------------------------------------------- |
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| 84 | |
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| 85 | get_soft_rel() { |
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| 86 | local ver str |
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| 87 | |
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| 88 | ## Sourcing environment |
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| 89 | . ${TRUST_JOB_ENV} >& /dev/null |
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| 90 | |
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| 91 | for str in ${TRUST_COMPILE_FORTRAN} \ |
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| 92 | ${TRUST_COMPILE_MPI} ${TRUST_COMPILE_NETCDF} \ |
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| 93 | ${TRUST_IO_CDO} ; do |
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| 94 | [ -z "$str" ] && continue |
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| 95 | ver='' |
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| 96 | |
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| 97 | ## Extract version number after searching pattern in PATH env. variable |
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| 98 | ver=$( echo $PATH | sed "s|.*\($str[0-9.]*\).*|\1|" ) |
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| 99 | |
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| 100 | ## option --version would work for main Fortran compilers and CDO |
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| 101 | if [[ $str =~ ${TRUST_COMPILE_FORTRAN}|${TRUST_IO_CDO} ]]; then |
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| 102 | ver=$( $str --version 2>&1 | grep -m1 -oe '\<[0-9. ]*\>' \ |
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| 103 | | xargs echo $str ) |
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| 104 | fi |
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| 105 | |
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| 106 | ## Cleaning characters string to display proper soft name |
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| 107 | ver=$( echo $ver | sed 's|[/-]| |g' ) |
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| 108 | |
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| 109 | echo $ver \ |
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| 110 | >> model.log |
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| 111 | done |
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| 112 | |
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| 113 | sed -n 2p model.log \ |
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| 114 | >> ${file_cmpf} |
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| 115 | sed -n 3p model.log \ |
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| 116 | >> ${file_lmpi} |
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| 117 | sed -n 4p model.log \ |
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| 118 | >> ${file_ncdf} |
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| 119 | |
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| 120 | cat model.log | awk '{printf "%-20s %s %s\n", $1, $2, $3}' |
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| 121 | env | sort > env.log |
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| 122 | } |
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| 123 | |
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| 124 | |
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| 125 | ## |
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| 126 | ##-------------------------------------------------------------------------------- |
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| 127 | |
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| 128 | compile_xios() { |
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| 129 | cd ${TRUST_IO_XIOS} |
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| 130 | |
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| 131 | rev=$( svn info | awk '/Last Changed Rev/ {print $NF}' ) |
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| 132 | printf 'XIOS branch %s rev. %s\n' \ |
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| 133 | $( basename ${TRUST_IO_XIOS} ) $rev \ |
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| 134 | | tee -a ${TRUST_TEST_DIR}/model.log |
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| 135 | echo "<a href=\"${TRUST_SVN_REPO}/ioserver/changeset/$rev target=\"_blank\">$rev</a>" \ |
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| 136 | >> ${TRUST_TEST_DIR}/${file_xios} |
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| 137 | |
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| 138 | eval " |
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| 139 | ./make_xios ${TRUST_IO_XIOS_MODE} --arch ${TRUST_MAIN_HPCC} \ |
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| 140 | --job ${TRUST_COMPILE_NPROC} \ |
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| 141 | ${TRUST_MAIN_STDOUT} |
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| 142 | " |
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| 143 | |
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| 144 | [ ! -e ./lib/libxios.a ] && get_out D || echo 'Success' |
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| 145 | } |
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| 146 | |
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| 147 | |
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| 148 | ## |
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| 149 | ##-------------------------------------------------------------------------------- |
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| 150 | |
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| 151 | compile_nemo() { |
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| 152 | cd ${TRUST_SVN_NEMOGCM}/CONFIG |
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| 153 | |
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| 154 | ## Recompiling from scratch if not in debug or dev mode |
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| 155 | if [[ ${TRUST_FLAG_DEBUG} == 'false' && ${TRUST_FLAG_DEV} == 'false' ]]; then |
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| 156 | |
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| 157 | if [[ -d ${TRUST_CFG_NEW} ]]; then |
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| 158 | ./makenemo -n ${TRUST_CFG_NEW} clean_config \ |
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| 159 | > /dev/null <<EOF |
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| 160 | y |
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| 161 | EOF |
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| 162 | fi |
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| 163 | |
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| 164 | fi |
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| 165 | |
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| 166 | eval " |
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| 167 | ./makenemo -n ${TRUST_CFG_NEW} -r ${TRUST_CFG_REF} \ |
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| 168 | -m ${TRUST_MAIN_HPCC} -j ${TRUST_COMPILE_NPROC} \ |
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| 169 | ${TRUST_CFG_KEY_ADD} ${TRUST_CFG_KEY_DEL} \ |
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| 170 | ${TRUST_MAIN_STDOUT} |
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| 171 | " |
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| 172 | |
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| 173 | [ ! -e ./${TRUST_CFG_NEW}/BLD/bin/nemo.exe ] && get_out E || echo 'Success' |
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| 174 | } |
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| 175 | |
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| 176 | |
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| 177 | ## |
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| 178 | ##-------------------------------------------------------------------------------- |
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| 179 | |
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| 180 | get_inputs() { |
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| 181 | cd ${TRUST_TEST_DIR} |
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| 182 | |
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| 183 | ## Test forcing directory |
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| 184 | if [[ ! ${TRUST_IO_FORC_PATH} && ${TRUST_IO_FORC_PATH-_} ]]; then |
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| 185 | |
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| 186 | echo 'No forcing files needed' |
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| 187 | |
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| 188 | else |
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| 189 | |
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| 190 | ## Test forcing archive |
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| 191 | if [ -n "${TRUST_IO_FORC_TAR}" ]; then |
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| 192 | |
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| 193 | echo 'Forcing archive(s): '${TRUST_IO_FORC_TAR} |
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| 194 | |
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| 195 | # List archive content & extract it by default |
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| 196 | local inputs_list=" |
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| 197 | for archive in \${TRUST_IO_FORC_TAR}; do |
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| 198 | tar -tvf \${TRUST_IO_FORC_PATH}/\$archive >> inputs_list.txt; |
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| 199 | done |
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| 200 | " |
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| 201 | local inputs_get=" |
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| 202 | for archive in \${TRUST_IO_FORC_TAR}; do |
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| 203 | tar -vxf \${TRUST_IO_FORC_PATH}/\$archive > /dev/null; |
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| 204 | done |
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| 205 | " |
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| 206 | |
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| 207 | else |
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| 208 | |
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| 209 | echo 'Forcing directory: '${TRUST_IO_FORC_PATH} |
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| 210 | |
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| 211 | ## List & copy files without archive |
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| 212 | local inputs_list=" ls -lh \${TRUST_IO_FORC_PATH}/* >> inputs_list.txt" |
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| 213 | local inputs_get=" \cp \${TRUST_IO_FORC_PATH}/* . " |
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| 214 | fi |
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| 215 | |
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| 216 | fi |
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| 217 | |
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| 218 | eval ${inputs_list} |
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| 219 | eval ${inputs_get} |
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| 220 | |
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| 221 | if [ $( find -name '*.gz' -print -quit ) ]; then |
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| 222 | find . -name '*.gz' -exec gzip -d {} \; |
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| 223 | fi |
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| 224 | |
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| 225 | cp ${TRUST_SVN_NEMOGCM}/CONFIG/${TRUST_CFG_NEW}/cpp_* . |
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| 226 | find ${TRUST_SVN_NEMOGCM}/CONFIG/${TRUST_CFG_NEW}/EXP00 \ |
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| 227 | -regex '.*\(_cfg\|.in\|opa\|_ref\|.xml\)' \ |
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| 228 | -exec cp {} . \; |
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| 229 | } |
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| 230 | |
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| 231 | |
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| 232 | ## |
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| 233 | ##-------------------------------------------------------------------------------- |
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| 234 | |
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| 235 | diff_inputs() { |
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| 236 | local dif file |
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| 237 | local files_list='' mesg='Same' |
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| 238 | |
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| 239 | ################################### |
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| 240 | ## Think of copying initial test ## |
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| 241 | ################################### |
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| 242 | |
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| 243 | ## Simple diff |
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| 244 | for file in cpp_* 'inputs_list.txt' *namelist_* *.xml; do |
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| 245 | dif='' |
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| 246 | |
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| 247 | ## Continue even if input file is not in here (see after) |
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| 248 | if [ -e ${TRUST_TEST_BENCHMARK}/$file ]; then |
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| 249 | dif=$( diff -q $file ${TRUST_TEST_BENCHMARK}/$file ) |
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| 250 | else |
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| 251 | dif=0 |
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| 252 | fi |
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| 253 | |
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| 254 | ## Pass over useless file omission in benckmark directory |
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| 255 | if [[ -n "$dif" && "$dif" != '0' ]]; then |
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| 256 | mesg='Different' |
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| 257 | echo $dif |
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| 258 | files_list+=$file' ' |
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| 259 | fi |
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| 260 | |
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| 261 | done |
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| 262 | |
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| 263 | [ $mesg == 'Same' ] && echo $mesg |
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| 264 | echo $mesg \ |
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| 265 | >> ${file_inpt} |
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| 266 | |
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| 267 | ## List different files for web comment |
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| 268 | [ -n "${files_list}" ] && echo 'Inputs : '${files_list}'differ<br>' \ |
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| 269 | >> temp_${file_note} |
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| 270 | } |
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| 271 | |
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| 272 | |
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| 273 | ## |
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| 274 | ##-------------------------------------------------------------------------------- |
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| 275 | |
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| 276 | job_submit() { |
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| 277 | ## Copy the submitting script to testing folder |
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| 278 | cp ${TRUST_JOB_SCRIPT} ${TRUST_TEST_DIR} |
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| 279 | |
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| 280 | TRUST_JOB_ID=$( eval ${TRUST_JOB_SUBMIT} ) |
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| 281 | [ $? -ne 0 ] && get_out G || printf "Success (job ID %s)\n" ${TRUST_JOB_ID} |
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| 282 | } |
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| 283 | |
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| 284 | |
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| 285 | ## |
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| 286 | ##-------------------------------------------------------------------------------- |
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| 287 | |
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| 288 | job_pending() { |
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| 289 | local outline=$( printf "%100s" ) time_elapsed=0 time_increment=30 |
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| 290 | |
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| 291 | sleep ${time_increment} |
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| 292 | |
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| 293 | ## Append a log file while pending |
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| 294 | while [[ $( eval ${TRUST_JOB_STATE} ) \ |
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| 295 | && ${time_elapsed} -lt ${TRUST_JOB_TIMEOUT} ]]; do |
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| 296 | printf "\n%s\n" ${outline// /#} \ |
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| 297 | >> computation.log |
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| 298 | [ -n "${TRUST_JOB_INFO}" ] && eval ${TRUST_JOB_INFO} \ |
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| 299 | >> computation.log |
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| 300 | sleep ${time_increment} |
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| 301 | time_elapsed=$(( ${time_elapsed} + ${time_increment} )) |
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| 302 | done |
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| 303 | |
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| 304 | sleep ${time_increment} |
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| 305 | |
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| 306 | ## Kill remaining job & stop the test if it's too long |
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| 307 | if [ ${time_elapsed} -eq ${TRUST_JOB_TIMEOUT} ]; then |
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| 308 | eval ${TRUST_JOB_KILL} &> /dev/null |
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| 309 | get_out I |
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| 310 | fi |
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| 311 | |
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| 312 | } |
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| 313 | |
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| 314 | |
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| 315 | ## |
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| 316 | ##-------------------------------------------------------------------------------- |
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| 317 | |
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| 318 | job_perfs() { |
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| 319 | if [ -n "${TRUST_JOB_TIME}" ]; then |
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| 320 | |
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| 321 | ## Interest for checking unusual time computation |
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| 322 | local time_cpu=$( eval ${TRUST_JOB_TIME} ) |
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| 323 | |
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| 324 | printf "Time: " |
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| 325 | echo ${time_cpu} | tee -a ${file_time} |
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| 326 | |
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| 327 | fi |
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| 328 | |
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| 329 | if [[ -n "${TRUST_JOB_RAM_P}" && -n "${TRUST_JOB_RAM_V}" ]]; then |
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| 330 | |
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| 331 | ## Interest for checking unusual memory usage |
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| 332 | local memory_pmax=$( eval ${TRUST_JOB_RAM_P} ) |
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| 333 | local memory_vmax=$( eval ${TRUST_JOB_RAM_V} ) |
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| 334 | |
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| 335 | printf "Max memory usage (physical/virtual): " |
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| 336 | echo ${memory_pmax}' / '${memory_vmax} | tee -a ${file_memy} |
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| 337 | fi |
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| 338 | } |
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| 339 | |
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| 340 | |
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| 341 | ## |
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| 342 | ##-------------------------------------------------------------------------------- |
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| 343 | |
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| 344 | job_state() { |
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| 345 | if [[ ! -e time.step || $( grep 'E R R O R' ocean.output ) ]]; then |
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| 346 | get_out H |
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| 347 | else |
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| 348 | echo 'Success' ## Must be reviewed |
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| 349 | fi |
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| 350 | } |
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| 351 | |
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| 352 | |
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| 353 | ## |
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| 354 | ##-------------------------------------------------------------------------------- |
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| 355 | |
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| 356 | diff_results() { |
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| 357 | local file |
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| 358 | local files_list='' mesg='Same' |
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| 359 | |
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| 360 | ################################### |
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| 361 | ## Think of copying initial test ## |
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| 362 | ################################### |
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| 363 | |
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| 364 | ## Now test is good by default ('OK') |
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| 365 | TRUST_FLAG_RESULT='OK' |
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| 366 | |
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| 367 | ## Simple diff |
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| 368 | for file in 'ocean.output' *.stat; do |
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| 369 | ## Stop if no minimal benchmark files (ocean.output, eventual stat files) |
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| 370 | [ ! -e ${TRUST_TEST_BENCHMARK}/$file ] && get_out J |
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| 371 | |
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| 372 | diff -q $file ${TRUST_TEST_BENCHMARK}/$file |
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| 373 | |
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| 374 | ## Continue even if it differs |
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| 375 | if [ $? -ne 0 ]; then mesg='Different'; files_list+=$file' '; fi |
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| 376 | |
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| 377 | done |
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| 378 | |
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| 379 | [ $mesg == 'Same' ] && echo $mesg |
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| 380 | |
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| 381 | ## List different files for web comment |
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| 382 | [ -n "${files_list}" ] && echo 'Results : '${files_list}'differ<br>' \ |
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| 383 | >> temp_${file_note} |
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| 384 | } |
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| 385 | |
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| 386 | |
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| 387 | ## |
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| 388 | ##-------------------------------------------------------------------------------- |
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| 389 | |
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| 390 | diff_restarts() { |
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| 391 | local dif filebase filebases ndomain out |
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| 392 | local files_list='' dif_sum='0' |
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| 393 | |
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| 394 | ## Find all restart files to rebuild |
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| 395 | if [ $( find -regex ".*_restart.*[0-9]\.nc" -print -quit ) ]; then |
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| 396 | ############################################################### |
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| 397 | ## Think to set the configuration name in the 'namelist_cfg' ## |
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| 398 | ############################################################### |
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| 399 | filebases=$( find -regextype sed -regex ".*${TRUST_CFG_NEW}.*_[0-9]\{4\}\.nc" \ |
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| 400 | | sed 's/\(.*\)_.*/\1/' | sort -u ) |
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| 401 | |
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| 402 | for filebase in $filebases; do |
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| 403 | |
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| 404 | ndomain=$( find -regex ".*${filebase}_[0-9]*.nc" \ |
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| 405 | | wc -l | awk '{print $1}' ) |
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| 406 | |
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| 407 | ##################################################### |
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| 408 | ## Handle 2 possibilities of 'rebuild_nemo' origin ## |
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| 409 | ##################################################### |
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| 410 | |
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| 411 | ${TRUST_SVN_NEMOGCM}/TOOLS/REBUILD_NEMO/rebuild_nemo \ |
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| 412 | -t ${TRUST_COMPILE_NPROC} $filebase $ndomain \ |
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| 413 | > /dev/null |
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| 414 | |
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| 415 | ## Possibility of remaining decomposed restarts (even after rebuild) |
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| 416 | if [ $? -eq 0 ]; then |
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| 417 | rm -f ${filebase}_[0-9]*.nc \ |
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| 418 | > /dev/null |
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| 419 | else |
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| 420 | get_out K |
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| 421 | fi |
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| 422 | |
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| 423 | ## Stop if no benchmark files (restart file) |
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| 424 | if [ -e ${TRUST_TEST_BENCHMARK}/$filebase.nc ]; then |
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| 425 | |
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| 426 | cdo diffn $filebase.nc ${TRUST_TEST_BENCHMARK}/$filebase.nc \ |
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| 427 | > cdo_diff.out 2> /dev/null |
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| 428 | |
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| 429 | ## Identical if cdo_diff.out is zero size |
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| 430 | [ ! -s cdo_diff.out ] && continue |
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| 431 | |
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| 432 | dif=$( grep -om1 '[0-9]* of [0-9]* records' cdo_diff.out ) |
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| 433 | |
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| 434 | if [ -n "$dif" ]; then |
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| 435 | files_list+=$filebase' ' && echo $filebase'.nc: '$dif |
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| 436 | let dif_sum+=$( echo $dif | sed '|^\([0-9]*\).*|\1|' ) |
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| 437 | fi |
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| 438 | |
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| 439 | fi |
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| 440 | |
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| 441 | done |
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| 442 | |
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| 443 | ## List modified restart(s) for web comment with sum of differences |
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| 444 | if [ ${dif_sum} -ne 0 ]; then |
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| 445 | echo 'Restarts: '${files_list}${dif_sum}' record(s) differ<br>' \ |
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| 446 | >> temp_${file_note} |
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| 447 | else |
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| 448 | echo 'Same' |
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| 449 | fi |
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| 450 | |
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| 451 | fi |
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| 452 | |
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| 453 | [ $TRUST_FLAG_RESULT == 'FAILED' ] && get_out L |
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| 454 | } |
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| 455 | |
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| 456 | |
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| 457 | ## |
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| 458 | ##-------------------------------------------------------------------------------- |
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| 459 | |
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| 460 | comments() { |
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| 461 | local opat |
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| 462 | local line='' state=$1 |
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| 463 | |
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| 464 | if [ -e ocean.output ]; then |
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| 465 | ## 'W A R N I N G' pattern by default |
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| 466 | opat="-A2 \"^ $state\"" |
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| 467 | [ "$state" == 'E R R O R' ] && opat="-A4 \"$state\"" |
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| 468 | |
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| 469 | ## Select first occurence for web comment |
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| 470 | line=$( eval grep -m1 $opat ocean.output | tr -d '\n' ) |
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| 471 | fi |
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| 472 | |
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| 473 | [ -n "$line" ] && ( echo $line; printf "$line<br>" \ |
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| 474 | >> temp_${file_note} ) |
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| 475 | } |
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| 476 | |
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| 477 | |
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| 478 | ## |
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| 479 | ##-------------------------------------------------------------------------------- |
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| 480 | |
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| 481 | log_make() { |
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| 482 | ## Format comments for web |
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| 483 | if [ -e temp_${file_note} ]; then |
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| 484 | cat temp_${file_note} | tr -d '\n' | sed 's/<br>$//' \ |
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| 485 | >> ${file_note} |
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| 486 | fi |
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| 487 | |
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| 488 | ## Construct txt file with all messenger files |
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| 489 | paste -d ';' mesg_*.txt | tee ${TRUST_TEST_SUMMARY} |
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| 490 | } |
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| 491 | |
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| 492 | |
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| 493 | ## |
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| 494 | ##-------------------------------------------------------------------------------- |
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| 495 | |
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| 496 | prod_publish() { |
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| 497 | local cmd |
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| 498 | local rev=$( awk '/NEMOGCM/ {print $NF}' model.log ) |
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| 499 | |
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| 500 | ## Production mode (-p|--prod) |
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| 501 | if [ ${TRUST_FLAG_PROD} == 'true' ]; then |
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| 502 | |
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| 503 | ## Create or append trusting logfile |
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| 504 | if [ -f ${TRUST_TEST_LOG} ]; then cmd='tail -1'; else cmd='cat'; fi |
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| 505 | |
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| 506 | $cmd ${TRUST_TEST_SUMMARY} \ |
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| 507 | >> ${TRUST_TEST_LOG} |
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| 508 | |
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| 509 | ## Send mail only when FAILED |
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| 510 | if [[ -n "${TRUST_TEST_MAILING}" \ |
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| 511 | && ${TRUST_FLAG_RESULT} == 'FAILED' ]]; then |
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| 512 | |
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| 513 | ## Content |
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| 514 | cat <<END_MAIL \ |
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| 515 | > trusting.mail |
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| 516 | Dear all, |
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| 517 | |
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| 518 | |
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| 519 | The following trusting sequence has not completed successfully: |
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| 520 | |
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| 521 | Testing configuration ${TRUST_CFG_NEW} based on ${TRUST_CFG_REF}. |
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| 522 | User installation ${TRUST_MAIN_USER} |
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| 523 | HPC environment ${TRUST_MAIN_HPCC} |
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| 524 | |
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| 525 | Here is the running environment summary: |
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| 526 | `cat model.log` |
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| 527 | |
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| 528 | For more details, look into the testing folder at: |
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| 529 | ${TRUST_TEST_DIR} |
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| 530 | An archive is also available to share the questionable configuration: |
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| 531 | ${TRUST_TEST_BENCHMARK}/${TRUST_TEST_BACKUP} |
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| 532 | |
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| 533 | END_MAIL |
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| 534 | |
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| 535 | ## Send with detailed subject |
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| 536 | mail -s "[NEMO Trusting][${TRUST_CFG_REF}][${TRUST_SVN_BRANCH}] \ |
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| 537 | ${TRUST_FLAG_RESULT} ${TRUST_FLAG_ERROR}" \ |
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| 538 | ${TRUST_TEST_MAILING} \ |
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| 539 | < trusting.mail |
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| 540 | fi |
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| 541 | |
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| 542 | fi |
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| 543 | } |
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| 544 | |
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| 545 | |
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| 546 | ## |
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| 547 | ##-------------------------------------------------------------------------------- |
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| 548 | |
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| 549 | get_out() { |
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| 550 | local time_step=0 |
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| 551 | |
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| 552 | TRUST_FLAG_ERROR=$1 |
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| 553 | |
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| 554 | printf "\n\nEnd of test\n" |
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| 555 | |
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| 556 | ## In case of compilation error |
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| 557 | cd ${TRUST_TEST_DIR} |
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| 558 | |
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| 559 | if [ ${TRUST_FLAG_RESULT} == 'FAILED' ]; then |
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| 560 | echo 'Failure' |
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| 561 | |
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| 562 | ## Error identification |
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| 563 | case ${TRUST_FLAG_ERROR} in |
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| 564 | |
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| 565 | ## Initialisation |
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| 566 | 'A') TRUST_FLAG_ERROR='Missing environment variable' ;; |
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| 567 | 'B') TRUST_FLAG_ERROR='Unable to create testing directory';; |
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| 568 | 'C') TRUST_FLAG_ERROR='SVN issue on local working copy' ;; |
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| 569 | |
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| 570 | ## Compilation |
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| 571 | 'D') TRUST_FLAG_ERROR='XIOS compilation failed' ;; |
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| 572 | 'E') TRUST_FLAG_ERROR='NEMO compilation failed' ;; |
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| 573 | |
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| 574 | ## Submission |
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| 575 | 'F') TRUST_FLAG_ERROR='Missing input files' ;; |
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| 576 | 'G') TRUST_FLAG_ERROR='Job submission error' ;; |
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| 577 | |
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| 578 | ## Computing |
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| 579 | 'H') TRUST_FLAG_ERROR='Crashed at time step ' |
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| 580 | comments 'E R R O R' |
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| 581 | [ -e time.step ] && time_step=$( cat time.step ) |
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| 582 | TRUST_FLAG_ERROR+=${time_step:=0} ;; |
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| 583 | 'I') TRUST_FLAG_ERROR='Exceeded time limit of ' |
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| 584 | TRUST_FLAG_ERROR+=$(( ${TRUST_JOB_TIMEOUT}/3600 ))'h' ;; |
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| 585 | |
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| 586 | ## Results |
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| 587 | 'J') TRUST_FLAG_ERROR='Missing previous outputs' ;; |
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| 588 | 'K') TRUST_FLAG_ERROR='Restart rebuild error' ;; |
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| 589 | 'L') TRUST_FLAG_ERROR='New outputs differ' ;; |
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| 590 | |
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| 591 | ## Other |
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| 592 | '*') TRUST_FLAG_ERROR='Unknown error' ;; |
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| 593 | |
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| 594 | esac |
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| 595 | |
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| 596 | else |
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| 597 | echo 'Success' && TRUST_FLAG_ERROR='Code is reliable' |
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| 598 | fi |
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| 599 | |
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| 600 | ## Eventual comments from ocean.output |
|---|
| 601 | [[ ! ${TRUST_FLAG_ERROR} =~ 'Crashed at time step' ]] && comments 'W A R N I N G' |
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| 602 | |
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| 603 | ## Last messenger files |
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| 604 | sed -i "2 s/.*/$TRUST_FLAG_RESULT/" ${file_rslt} |
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| 605 | sed -i "2 s/.*/$TRUST_FLAG_ERROR/" ${file_stat} |
|---|
| 606 | |
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| 607 | ## Save tested configuration if trusting failed in production mode ('-p') |
|---|
| 608 | if [[ ${TRUST_FLAG_RESULT} == 'FAILED' && ${TRUST_FLAG_PROD} == 'true' ]]; then |
|---|
| 609 | echo 'Creating archive '${TRUST_TEST_BACKUP}' under '${TRUST_TEST_BENCHMARK} |
|---|
| 610 | tar -czf ${TRUST_TEST_BENCHMARK}/${TRUST_TEST_BACKUP} * \ |
|---|
| 611 | -C ${TRUST_SVN_NEMOGCM}/CONFIG/${TRUST_CFG_NEW}/MY_SRC . \ |
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| 612 | -C ${TRUST_SVN_NEMOGCM}/CONFIG/${TRUST_CFG_NEW} \ |
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| 613 | cpp_${TRUST_CFG_NEW}.fcm |
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| 614 | fi |
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| 615 | |
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| 616 | ## Logfile construct & eventual sending of notification email |
|---|
| 617 | printf "\nTrusting digest:\n----------------\n" |
|---|
| 618 | log_make |
|---|
| 619 | prod_publish |
|---|
| 620 | |
|---|
| 621 | exit 0 |
|---|
| 622 | } |
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