[5268] | 1 | #!/bin/bash |
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| 2 | |
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| 3 | |
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[5644] | 4 | cd $( dirname $0 ) |
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| 5 | |
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[5629] | 6 | ## Set defaults |
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| 7 | ##--------------------------------------------------- |
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[5799] | 8 | TRUS_DIRE=$PWD |
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| 9 | TRUS_DBUG=0; TRUS_PROD=0; TRUS_HELP=0 |
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| 10 | ## No update on SVN directories & 'FAILED' result for 'Unknown error' ) |
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| 11 | TRUS_SVNA='svn status'; TRUS_RSLT='FAILED'; TRUS_RORR=0 |
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[5788] | 12 | xios_mode='--full'; stdout_redir='>&' |
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[5799] | 13 | rev=$( svn info | awk '(NR == 9) {print $NF}' ) |
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[5268] | 14 | |
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[5681] | 15 | |
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[5799] | 16 | ## Get options (replacing initials settings) |
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[5629] | 17 | ##--------------------------------------------------- |
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[5268] | 18 | while [ $# -ne 0 ]; do |
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| 19 | case $1 in |
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[5799] | 20 | '-a'|'--archive') TRUS_TARF=$2; shift 2;; '-b'|'--branch' ) TRUS_BRAN=$2; shift 2;; |
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| 21 | '-d'|'--debug' ) TRUS_DBUG=1 ; shift ;; '-e'|'--email' ) TRUS_MAIL=$2; shift 2;; |
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| 22 | '-f'|'--forcdir') TRUS_FORC=$2; shift 2;; '-j'|'--job' ) TRUS_NPRO=$2; shift 2;; |
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| 23 | '-h'|'--help' ) TRUS_HELP=1 ; shift ;; '-m'|'--machine') TRUS_HPCC=$2; shift 2;; |
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| 24 | '-n'|'--newconf') TRUS_CONF=$2; shift 2;; '-r'|'--refconf') TRUS_REFE=$2; shift 2;; |
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| 25 | '-t'|'--time' ) TRUS_TOUT=$2; shift 2;; '-p'|'--prod' ) TRUS_PROD=1 ; shift ;; |
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| 26 | '-u'|'--user' ) TRUS_USER=$2; shift 2;; '-v'|'--version') TRUS_SVNV=$2; shift 2;; |
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| 27 | '-w'|'--workdir') TRUS_WORK=$2; shift 2;; "*" ) TRUS_HELP=1 ; shift ;; |
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[5268] | 28 | esac |
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| 29 | done |
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[5276] | 30 | |
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[5681] | 31 | |
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[5788] | 32 | ## Initialization (HPC & user environment) |
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| 33 | ##--------------------------------------------------- |
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[8780] | 34 | if [[ ! -e cfg/${TRUS_USER}.cfg || ! -e cfg/${TRUS_HPCC}.cfg || ${TRUS_HELP} -eq 1 ]]; then |
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[5929] | 35 | cat ./inc/trusting_help.txt |
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[5690] | 36 | |
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[5799] | 37 | if [ ${TRUS_HELP} -eq 0 ]; then |
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| 38 | printf "\n\n\033[0;33m" |
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| 39 | printf "At least one configuration (arch or user) file is missing or misspelled:" |
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| 40 | printf "\t'%s'.cfg\t'%s'.cfg" ${TRUS_USER} ${TRUS_HPCC} |
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| 41 | printf "\033[0m" |
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[5788] | 42 | fi |
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[5695] | 43 | |
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[5799] | 44 | printf "\n\nContent of 'config' folder:" |
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| 45 | find config -name *.cfg | cut -d/ -f2 \ |
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| 46 | | xargs -n 4 printf "%-25s\t%-25s\t%-25s\n" |
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[5788] | 47 | exit 1 |
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| 48 | else |
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[5929] | 49 | . ./inc/trusting.env && . ./inc/trusting_func.sh |
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| 50 | |
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[5799] | 51 | ## DEBUG option to speed up & expand verbosity of compilation |
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| 52 | [ ${TRUS_DBUG} -eq 1 ] && { set -vx; xios_mode=''; stdout_redir='>'; } |
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[5268] | 53 | |
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[5788] | 54 | ## If -v|--version option has been set, modify default SVN action on directories |
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[5799] | 55 | if [ $( echo ${TRUS_SVNV} | grep "HEAD\|up\|update" ) ]; then |
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[5988] | 56 | TRUS_SVNA='svn update -r HEAD --accept=theirs-conflict' |
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[5799] | 57 | elif [ $( echo ${TRUS_SVNV} | grep -o '{[0-9]\{4\}-[0-9]\{2\}-[0-9]\{2\}}' ) ]; then |
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[5809] | 58 | TRUS_SVNA='svn update -r '$( echo ${TRUS_SVNV} | grep -o '{[0-9]\{4\}-[0-9]\{2\}-[0-9]\{2\}}' ) |
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[5799] | 59 | elif [ $( echo ${TRUS_SVNV} | grep -o '[0-9]*' ) ]; then |
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[5809] | 60 | TRUS_SVNA='svn update -r '$( echo ${TRUS_SVNV} | grep -o '[0-9]*' ) |
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[5355] | 61 | fi |
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[5268] | 62 | |
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[5355] | 63 | fi |
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[5268] | 64 | |
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| 65 | |
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[5690] | 66 | ## Display contextual summary of trusting test |
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[5629] | 67 | ##--------------------------------------------------- |
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[5788] | 68 | echo |
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[5929] | 69 | if [ -t 0 ]; then cat ./inc/banner.txt; else cat ./inc/banner.html; fi |
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[5788] | 70 | echo |
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| 71 | echo '****************************************************************************************************' |
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| 72 | echo '* *' |
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| 73 | echo '* NEMO Trusting (Continuous Integration Tool) *' |
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[5799] | 74 | echo "* ver.$rev *" |
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[5788] | 75 | echo '* *' |
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| 76 | echo '****************************************************************************************************' |
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| 77 | echo |
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[5929] | 78 | printf "\t§ Testing configuration\t\t%s based on %s\n" ${TRUS_CONF} ${TRUS_REFE} |
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| 79 | printf "\t§ SVN working copy\t\t%s/%s\n" ${TRUS_WORK} ${TRUS_BRAN} |
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| 80 | printf "\t§ Benchmark folder\t\t%s\n" ${TRUS_STOR} |
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| 81 | printf "\t§ (Super)Computer\t\t%s\n" ${TRUS_HPCC} |
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| 82 | printf "\t§ User installation\t\t%s\n\n" ${TRUS_USER} |
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[5644] | 83 | |
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[5681] | 84 | |
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[5690] | 85 | ## Make timestamped directory with messenger files |
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[5644] | 86 | ##--------------------------------------------------- |
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[5695] | 87 | print_step 'Timestamped testing directory' |
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[5929] | 88 | mkdir -p ${TRUS_SCRA} ${TRUS_STOR} |
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| 89 | cd ${TRUS_SCRA} |
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| 90 | echo ${TRUS_SCRA} |
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[5695] | 91 | init_files |
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| 92 | get_date |
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[5355] | 93 | |
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[5681] | 94 | |
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[5690] | 95 | ## Get SVN revision on XIOS & NEMO essentials directories |
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[5629] | 96 | ##--------------------------------------------------- |
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[5799] | 97 | print_step "SVN action on NEMO directories: ${TRUS_SVNA}" |
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[5695] | 98 | get_nemo_rev |
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[5444] | 99 | |
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[5681] | 100 | |
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[5690] | 101 | ## Check softwares versions (after sourced arch environment) |
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[5629] | 102 | ##--------------------------------------------------- |
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[5788] | 103 | print_step 'Get testing environement' |
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[5695] | 104 | get_soft_rel |
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[5929] | 105 | cat model.log | awk '{printf "%-20s %s %s\n", $1, $2, $3}' |
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[5788] | 106 | env | sort > env.log |
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[5268] | 107 | |
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[5929] | 108 | |
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[5690] | 109 | ## XIOS compilation from scratch |
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[5629] | 110 | ##--------------------------------------------------- |
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[5695] | 111 | print_step 'Compile XIOS' |
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[5799] | 112 | cd ${TRUS_XIOS} |
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[5788] | 113 | eval ./make_xios ${xios_mode} --arch ${TRUS_HPCC} --job ${TRUS_NPRO} \ |
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| 114 | ${stdout_redir} /dev/null |
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[5695] | 115 | [ ! -e lib/libxios.a ] && get_out 1 || echo 'Success' |
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[5444] | 116 | |
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[5690] | 117 | |
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| 118 | ## NEMO compilation from scratch |
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[5629] | 119 | ##--------------------------------------------------- |
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[5788] | 120 | print_step "Compile ${TRUS_REFE} configuration" |
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[5799] | 121 | cd ${TRUS_NGCM}/CONFIG |
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| 122 | [[ -d ${TRUS_CONF} && ${TRUS_DBUG} -eq 0 ]] && ./makenemo -n ${TRUS_CONF} clean_config \ |
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[5695] | 123 | > /dev/null <<EOF |
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[5669] | 124 | y |
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| 125 | EOF |
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[5681] | 126 | |
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[5799] | 127 | eval ./makenemo -n ${TRUS_CONF} -r ${TRUS_REFE} -m ${TRUS_HPCC} -j ${TRUS_NPRO} \ |
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| 128 | ${TRUS_KEYA} ${TRUS_KEYD} \ |
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[5788] | 129 | ${stdout_redir} /dev/null |
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[5799] | 130 | [ ! -e ${TRUS_CONF}/BLD/bin/nemo.exe ] && get_out 2 || echo 'Success' |
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[5268] | 131 | |
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[5681] | 132 | |
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[5690] | 133 | ## Get all inputs for running |
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[5629] | 134 | ##--------------------------------------------------- |
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[5695] | 135 | print_step 'Set job (copying or extracting inputs)' |
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[5929] | 136 | cd ${TRUS_SCRA} |
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| 137 | get_inputs |
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[5799] | 138 | cp ${TRUS_NGCM}/CONFIG/${TRUS_CONF}/cpp_* . |
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| 139 | find ${TRUS_NGCM}/CONFIG/${TRUS_CONF}/EXP00 -regex '.*\(_cfg\|.in\|opa\|_ref\|.xml\)' \ |
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[5788] | 140 | -exec cp {} . \; |
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[5286] | 141 | |
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[5681] | 142 | |
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[5690] | 143 | ## Check inputs |
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[5629] | 144 | ##--------------------------------------------------- |
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[5788] | 145 | print_step 'Compare inputs' |
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[5695] | 146 | diff_inputs |
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[5633] | 147 | |
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[5681] | 148 | |
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[5690] | 149 | ## Job submission & computation |
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[5629] | 150 | ##--------------------------------------------------- |
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[5695] | 151 | print_step 'Submit job' |
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[5929] | 152 | cp ${TRUS_DIRE}/batch/${TRUS_JSPT} ${TRUS_SCRA} ## Copy the submitting script to testing folder |
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| 153 | TRUS_JIDN=$( eval ${TRUS_JSUB} ) |
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| 154 | [ $? -ne 0 ] && get_out 4 || printf "Success (job ID %s)\n" ${TRUS_JIDN} |
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[5695] | 155 | print_step 'Pending job' |
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| 156 | job_pending |
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[5455] | 157 | print_step 'Job finished' |
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| 158 | |
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[5681] | 159 | |
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[5788] | 160 | ## Check job state & get computation performances if succeeded |
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[5629] | 161 | ##--------------------------------------------------- |
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[5472] | 162 | print_step 'Test job state' |
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[5929] | 163 | [[ ! -e time.step || $( grep 'E R R O R' ocean.output ) ]] && get_out 5 || echo 'Success' ## Must be reviewed |
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[5788] | 164 | print_step 'Get job performances' |
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| 165 | get_time |
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| 166 | get_memy |
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[5681] | 167 | |
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[5286] | 168 | |
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[5690] | 169 | ## Check outputs |
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[5629] | 170 | ##--------------------------------------------------- |
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[5788] | 171 | TRUS_RSLT='OK' ## 'OK' by default |
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| 172 | print_step 'Compare outputs' |
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[5695] | 173 | diff_results |
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[5788] | 174 | print_step 'Compare restarts' |
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[5695] | 175 | diff_restart |
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[5788] | 176 | [ $TRUS_RSLT == 'FAILED' ] && get_out 8 |
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[5286] | 177 | |
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[5268] | 178 | |
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[5690] | 179 | ## End, at least nothing has changed ;-) |
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[5629] | 180 | ##--------------------------------------------------- |
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[5695] | 181 | get_out 0 |
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