source: branches/2015/dev_r5092_CNRS_SETTE/NEMOGCM/TRUST/trusting_func.sh @ 5402

#!/bin/bash


diff_inputs() {
    for file in inputs_list.txt $( ls namelist_* ) iodef.xml; do
   diff $file ${REFE_DIR}/$file

   if [ $? -ne 0 ]; then
       printf "Input files\nDifferent" | tee mesg_09_inputfiles_${CFG_USER}_${CFG_ARCH}.txt
       get_out
   fi

    done

    printf "Input files\nSame"              | tee mesg_09_inputfiles_${CFG_USER}_${CFG_ARCH}.txt
}

diff_nc() {
    stat=100; file1=$1; file2=$2

    cdo diffv $file1 $file2 > out_tmp
    ( [ $? -ne 0 ] && stat=100 ) || stat=$( grep -m 1 'records differ' out_tmp | awk -Fof '{print $1}' )
    [ -f out_tmp ] && rm out_tmp

    return $stat
} 

diff_restart() {
    last_time_step=$( cat ${REFE_DIR}/time.step | tr -d [:space:] )
    result_final=0

    echo 'Last time step: '${last_time_step}

    for file in restart restart_ice restart_trc; do
   printf "${TEST_DIR}/*${last_time_step}_${file}*.nc: "
   find ${TEST_DIR} -name *${last_time_step}_$file*.nc && exit 0
   if [ $( find ${TEST_DIR} -regex .*${last_time_step}_$file[_0-9]*.nc ) ]; then
       filebase=$( ls *${last_time_step}_$file*.nc | sed "s/^\(.*_\)0*$last_time_step.*/\1/" )
       ${NEMO_TRBD}/rebuild_nemo -t $NPROC ${filebase}_${last_time_step}_$file $(( ${last_time_step} + 1 )) #>/dev/null
       result=$( diff_nc ${TEST_DIR}/*${last_time_step}_$file.nc ${REFE_DIR}/*${last_time_step}_$file.nc )
       printf "cdo diffv $result\n"
       (( result_final = result_final + result ))
#      \rm *${last_time_step}_${file}_[0-9]*.nc
   else
       printf "no restart files found for comparison\n"
   fi

    done

    return ${result_final}
}

get_rel() {
    for rel in $CDO $COMPILER $MPI $NETCDF; do
                                arch_rel=$( echo $LOADEDMODULES | sed "s#.*$rel/\([^:]*\).*#\1#" )
   [ -z "${arch_rel}" ] && arch_rel=$( echo $PATH          | sed "s#.*$rel/\([^/]*\).*#\1#" )
   [ $( echo $rel | grep $COMPILER ) ] && arch_rel=$( $rel --version | grep -m1 -o ' [0-9.]* ' )
   echo $rel ${arch_rel} >> model.log
    done
}

get_rev() {
    rev=0

#    for dir in ${DIR_XIOS}  ${NEMO_ARCH} ${NEMO_CONF} ${NEMO_ENGI} ${NEMO_EIOI} \
    for dir in ${NEMO_ARCH} ${NEMO_CONF} ${NEMO_ENGI} ${NEMO_EIOI} \
          ${NEMO_EFCM} ${NEMO_TRUS} ${NEMO_TCMP} ${NEMO_TRBD}               ; do
   # For time being, just get revision number from XIOS
#  [ $dir == ${DIR_XIOS} ] && echo 'XIOS '$( svn info $dir | awk '(NR == 9) {print $NF}' ) >> model.log && continue
   ${SVN_CMD} $dir
   rev_loc=$( svn info $dir | awk '(NR == 9) {print $NF}' )
   (( ${rev_loc} >= $rev )) && rev=${rev_loc}
    done

    echo 'NEMO '$rev >> model.log
}

mesg_make() {
    paste -d ';' mesg_*_${CFG_USER}_${CFG_ARCH}.txt > trusting_${DATE_STR}_${CFG_USER}_${CFG_ARCH}.txt
    cat trusting_${DATE_STR}_${CFG_USER}_${CFG_ARCH}.txt
}

mesg_publish() {
  
if [ $PUBLISH -eq 1 ]; then

  if [ -f ${TEST_DIR}/trusting_${CFG_USER}_${CFG_ARCH}.txt ] ; then
      tail -1 trusting_${DATE_STR}_${CFG_USER}_${CFG_ARCH}.txt >> ${TEST_DIR}/trusting_${CFG_USER}_${CFG_ARCH}.txt
  else
      cp      trusting_${DATE_STR}_${CFG_USER}_${CFG_ARCH}.txt    ${TEST_DIR}/trusting_${CFG_USER}_${CFG_ARCH}.txt
  fi

  cp trusting_${DATE_STR}_${CFG_USER}_${CFG_ARCH}.txt ${TEST_DIR}
#  chmod o+r ${TEST_DIR}/trusting_${DATE_STR}_${CFG_USER}_${CFG_ARCH}.txt
  
#  rm -rf              ${DIR_WORK}/../../dods/public/${LOGNAME}/trusting/${CONF_REF}
#  cp -alf ${TEST_DIR} ${DIR_WORK}/../../dods/public/${LOGNAME}/trusting/${CONF_REF}
#  chmod o+rX          ${DIR_WORK}/../../dods/public/${LOGNAME}/trusting/${CONF_REF}
  
  # Send mail only when FAILED
  if [[ $( grep 'FAILED' mesg_02_status_${CFG_USER}_${CFG_ARCH}.txt ) && ! -z $MAIL ]]; then
      cat << END_MAIL > ${TEST_DIR}/trusting.mail
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Dear $USER,

The trusting sequence for ${CONF_REF} has failed.
Please consult http://webservices.ipsl.fr/trusting/

Failed at step: `tail -n 1 mesg_03_step_${CFG_USER}_${CFG_ARCH}.txt`
Directory : ${TEST_DIR}

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

END_MAIL
      mail -s "[trusting ${CONF_REF}] FAILED" $MAIL < ${TEST_DIR}/trusting.mail
  fi

fi
}

get_out() {
   cd ${TEST_DIR}
        mesg_make; mesg_publish

        # Add tar saved into {DIR_STOR}
   find ${DIR_SCRA}/trusting/${CONF_REF}/* -prune -mtime +7 -exec /bin/rm -rf {} \; > /dev/null 2>&1
        [ -f ${DIR_STOR}/${CONF_REF}.tar ] && \rm ${DIR_STOR}/${CONF_REF}.tar
        tar -cf ${DIR_STOR}/${CONF_REF}.tar .

        exit
}