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sette_test-cases.sh in branches/2017/dev_merge_2017/NEMOGCM/SETTE – NEMO

source: branches/2017/dev_merge_2017/NEMOGCM/SETTE/sette_test-cases.sh @ 9522

Last change on this file since 9522 was 9522, checked in by clem, 6 years ago

debug test cases
  • Property svn:executable set to *
File size: 23.9 KB
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[9268]1#!/bin/bash
2############################################################
3# Author : Simona Flavoni for NEMO
4# Contact: sflod@locean-ipsl.upmc.fr
5#
6# sette_test-cases.sh   : principal script of SET TEsts for NEMO (SETTE)
7#                       : this script : compiles, run and tests TEST_CASES
8#
9#                       : TO DO: test if nitend is equal to end of run.stat
10# ----------------------------------------------------------------------
11# NEMO/SETTE , NEMO Consortium (2018)
12# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
13# ----------------------------------------------------------------------
14#
15#
16#############################################################
17#set -vx
18set -o posix
19#set -u
20#set -e
21# ===========
22# DESCRIPTION
23# ===========
24#
25# Variables to be checked by user:
26#
27# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
28# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
29# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
30# INTERACT_FLAG     : flag to run in interactive mode "yes"
31#                           to run in batch mode "no"
32# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
33#                           to run in sequential mode (NB_PROC = 1) "no"
34# USING_XIOS        : flag to control the activation of key_iomput
35#                      "yes" to compile using key_iomput and link to the external XIOS library
36#                      "no"  to compile without key_iomput and link to the old IOIPSL library
37# USING_MPMD        : flag to control the use of stand-alone IO servers
38#                     requires USING_XIOS="yes"
39#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
40#                      "no"  to run in SPMD (attached) mode without separate IO servers
41# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
42#                     set to zero if USING_MPMD="no"
43#
44# Principal script is sette_test-cases.sh, that calls
45#
46#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
47#              and links to opa in ${CONFIG_NAME}/EXP00)
48#
49#  param.cfg : sets and loads following directories:
50#
51#   FORCING_DIR         : is the directory for forcing files (tarfile)
52#   INPUT_DIR           : is the directory for input files storing
53#   TMPDIR              : is the temporary directory (if needed)
54#   NEMO_VALIDATION_DIR : is the validation directory
55#
56#   (NOTE: this file is the same for all configrations to be tested with sette_test-cases.sh)
57#
58#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
59#   set_namelist     : function declared in all_functions that sets namelist parameters
60#   post_test_tidyup : creates validation storage directory and copies required output files
61#                      (run.stat and ocean.output) in it after execution of test.
62#
63#  VALIDATION tree is:
64#
65#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
66#
67#  prepare_exe_dir.sh : defines and creates directory where the test is executed
68#                       execution directory takes name of TEST_NAME defined for every test
69#                       in sette_test-cases.sh. (each test in executed in its own directory)
70#
71#  prepare_job.sh     : to generate the script run_job.sh
72#
73#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
74#                        see sette_test-cases.sh and BATCH_TEMPLATE directory
75#
76#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
77#        can be found paths to the input tar file)
78#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
79#        directory
80#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
81#        remain in ${NEW_CONF}/EXP00
82#
83#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
84#        executed commands
85#
86#  NOTE: if sette_test-cases.sh is stopped in output.sette there is written the last command
87#        executed by sette_test-cases.sh
88#
89# example use: ./sette_test-cases.sh
90#########################################################################################
91#
92# Compiler among those in NEMOGCM/ARCH
93COMPILER=X64_ADA
94
95export BATCH_COMMAND_PAR="llsubmit"
96export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR
97export INTERACT_FLAG="no"
98export MPIRUN_FLAG="yes"
99export USING_XIOS="yes"
100#
101export DEL_KEYS="key_iomput"
102if [ ${USING_XIOS} == "yes" ] 
103 then
104   export DEL_KEYS=""
105fi
106#
107# Settings which control the use of stand alone servers (only relevant if using xios)
108#
109export USING_MPMD="no"
110export NUM_XIOSERVERS=4
111export JOB_PREFIX=batch-mpmd
112#
113if [ ${USING_MPMD} == "no" ] 
114 then
115   export NUM_XIOSERVERS=0
116   export JOB_PREFIX=batch
117fi
118#
119#
120if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no"]
121 then
122   echo "Incompatible choices. MPMD mode requires the XIOS server"
123   exit
124fi
125
126# Directory to run the tests
127SETTE_DIR=$(cd $(dirname "$0"); pwd)
128MAIN_DIR=$(dirname $SETTE_DIR)
129CONFIG_DIR0=${MAIN_DIR}/CONFIG
130TOOLS_DIR=${MAIN_DIR}/TOOLS
131COMPIL_DIR=${TOOLS_DIR}/COMPILE
132
133CMP_NAM=${1:-$COMPILER}
134# Copy job_batch_COMPILER file for specific compiler into job_batch_template
135cd ${SETTE_DIR}
136cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
137# Description of configuration tested:
138# OVERFLOW       : 1  TEST s-coordinates : (tracers) Advection schemes: FCT2, FCT4, ubs
139#                                        & (dynamics) advection schemes: flux form (ubs, centered), vector form (een)
140#                          zps-coordinates : (tracers) Advection schemes: FCT2, FCT4, ubs
141#                                        & (dynamics) advection schemes: flux form (ubs, centered), vector form (een, and een + Hollingsworth correction)
142# LOCK_EXCHANGE  : 2
143# VORTEX         : 3
144# WAD            : 4       
145# SAS_BIPER      : 5
[9518]146# ISOMIP         : 6
[9268]147
148
[9518]149for config in 1 2 3 4 5 6
[9268]150do
151
152# TESTS FOR OVERFLOW CONFIGURATION
153if [ ${config} -eq 1 ] ;  then
154    ## Restartability tests for OVERFLOW
155    export TEST_NAME="LONG"
156    cd ${CONFIG_DIR0}
[9518]157    . ./makenemo -m ${CMP_NAM} -a TEST_CASES -n OVERFLOW_ST -r OVERFLOW -j 8 del_key ${DEL_KEYS}
[9268]158    cd ${SETTE_DIR}
159    . ./param.cfg
160    . ./all_functions.sh
161    . ./prepare_exe_dir.sh
162    JOB_FILE=${EXE_DIR}/run_job.sh
163    NPROC=1
164    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
165    cd ${EXE_DIR} 
166    set_namelist namelist_cfg cn_exp \"OVF_LONG\"
167    set_namelist namelist_cfg nn_it000 1
168    set_namelist namelist_cfg nn_itend 120
169    set_namelist namelist_cfg nn_stock 60
170    if [ ${USING_MPMD} == "yes" ] ; then
171       set_xio_using_server iodef.xml true
172    else
173       set_xio_using_server iodef.xml false
174    fi
175    cd ${SETTE_DIR}
176    . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
177
178    cd ${SETTE_DIR}
179    export TEST_NAME="SHORT"
180    . ./prepare_exe_dir.sh
181    cd ${EXE_DIR}
182    set_namelist namelist_cfg cn_exp \"OVF_SHORT\"
183    set_namelist namelist_cfg nn_it000 61
184    set_namelist namelist_cfg nn_itend 120
185    set_namelist namelist_cfg nn_stock 60
186    set_namelist namelist_cfg ln_rstart .true.
187    set_namelist namelist_cfg nn_rstctl 2
188    set_namelist namelist_cfg cn_ocerst_in \"OVF_LONG_00000060_restart\"
189    if [ ${USING_MPMD} == "yes" ] ; then
190       set_xio_using_server iodef.xml true
191    else
192       set_xio_using_server iodef.xml false
193    fi
194    ln -sf ../LONG/OVF_LONG_00000060_restart.nc .
195    if [ ${USING_MPMD} == "yes" ] ; then
196       set_xio_using_server iodef.xml true
197    else
198       set_xio_using_server iodef.xml false
199    fi
200    cd ${SETTE_DIR}
201    . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
202    cd ${SETTE_DIR}
203    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
204
205
206    ## Test for all advection, vert. coordinates, vector form, flux form: test runability and complete all time steps
207    ## Needed namelist-xxxx for every type of run tested
208    cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
209
210    for file in $(echo `ls namelist_*_cfg `) ; do
211        TEST_NAME=`ls $file | sed -e "s/namelist_//" | sed -e "s/_cfg//"`
212        TEST_NAME="EXP-${TEST_NAME}"
213        `mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME}`
214        export TEST_NAME="${TEST_NAME}"
215         ##
216        cd ${SETTE_DIR}
217        . ./param.cfg
218        . ./all_functions.sh
219        . ./prepare_exe_dir.sh
220        JOB_FILE=${EXE_DIR}/run_job.sh
221        NPROC=1
222        if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
223        cd ${EXE_DIR}
224        if [ ${USING_MPMD} == "yes" ] ; then
225           set_xio_using_server iodef.xml true
226        else
227           set_xio_using_server iodef.xml false
228        fi
229        cd ${SETTE_DIR}
230        . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
231        cd ${SETTE_DIR}
232        . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
233       ##
234     done
235fi
236
237# TESTS FOR LOCK_EXCHANGE CONFIGURATION
238if [ ${config} -eq 2 ] ;  then
239    ## Restartability tests for LOCK_EXCHANGE
240    export TEST_NAME="LONG"
241    cd ${CONFIG_DIR0}
[9518]242    . ./makenemo -m ${CMP_NAM} -a TEST_CASES -n LOCK_EXCHANGE_ST -r OVERFLOW -j 8 del_key ${DEL_KEYS}
[9268]243    cd ${SETTE_DIR}
244    . ./param.cfg
245    . ./all_functions.sh
246    . ./prepare_exe_dir.sh
247    JOB_FILE=${EXE_DIR}/run_job.sh
248    NPROC=1
249    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
250    cd ${EXE_DIR}
251    set_namelist namelist_cfg cn_exp \"LOCK_LONG\"
252    set_namelist namelist_cfg nn_it000 1
253    set_namelist namelist_cfg nn_stock 60
254    set_namelist namelist_cfg nn_itend 120
255    if [ ${USING_MPMD} == "yes" ] ; then
256       set_xio_using_server iodef.xml true
257    else
258       set_xio_using_server iodef.xml false
259    fi
260    cd ${SETTE_DIR}
261    . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
262
263    cd ${SETTE_DIR}
264    export TEST_NAME="SHORT"
265    . ./prepare_exe_dir.sh
266    cd ${EXE_DIR}
267    set_namelist namelist_cfg cn_exp \"LOCK_SHORT\"
268    set_namelist namelist_cfg nn_it000 61
269    set_namelist namelist_cfg nn_itend 120
270    set_namelist namelist_cfg nn_stock 60
271    set_namelist namelist_cfg ln_rstart .true.
272    set_namelist namelist_cfg nn_rstctl 2
273    set_namelist namelist_cfg cn_ocerst_in \"LOCK_LONG_00000060_restart\"
274    if [ ${USING_MPMD} == "yes" ] ; then
275       set_xio_using_server iodef.xml true
276    else
277       set_xio_using_server iodef.xml false
278    fi
279    ln -sf ../LONG/LOCK_LONG_00000060_restart.nc .
280    if [ ${USING_MPMD} == "yes" ] ; then
281       set_xio_using_server iodef.xml true
282    else
283       set_xio_using_server iodef.xml false
284    fi
285    cd ${SETTE_DIR}
286    . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
287    cd ${SETTE_DIR}
288    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
289
290    ## Test for all advection, vector form, flux form: test runability and complete all time steps
291    ## Needed namelist-xxxx for every type of run tested
292    cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
293
294    for file in $(echo `ls namelist_*_cfg `) ; do
295        TEST_NAME=`ls $file | sed -e "s/namelist_//" | sed -e "s/_cfg//"`
296        TEST_NAME="EXP-${TEST_NAME}"
297        `mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME}`
298        export TEST_NAME="${TEST_NAME}"
299         ## 
300        cd ${SETTE_DIR}
301        . ./param.cfg
302        . ./all_functions.sh
303        . ./prepare_exe_dir.sh
304        JOB_FILE=${EXE_DIR}/run_job.sh
305        NPROC=1
306        if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
307        cd ${EXE_DIR}
308        if [ ${USING_MPMD} == "yes" ] ; then
309           set_xio_using_server iodef.xml true
310        else
311           set_xio_using_server iodef.xml false
312        fi
313        cd ${SETTE_DIR}
314        . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
315        cd ${SETTE_DIR}
316        . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
317       ##
318   done
319fi
320
321# TESTS FOR VORTEX CONFIGURATION
322if [ ${config} -eq 3 ] ;  then
323    ## Restartability tests for VORTEX
324    export TEST_NAME="LONG"
325    cd ${CONFIG_DIR0}
[9518]326    . ./makenemo -m ${CMP_NAM} -a TEST_CASES -n VORTEX_ST -r VORTEX -j 8 del_key ${DEL_KEYS}
[9268]327    cd ${SETTE_DIR}
328    . ./param.cfg
329    . ./all_functions.sh
330    . ./prepare_exe_dir.sh
331    JOB_FILE=${EXE_DIR}/run_job.sh
332    NPROC=1
333    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
334    cd ${EXE_DIR}
335    set_namelist namelist_cfg cn_exp \"VORTEX_LONG\"
336    set_namelist namelist_cfg nn_it000 1
337    set_namelist namelist_cfg nn_stock 60
338    set_namelist namelist_cfg nn_itend 120
339    if [ ${USING_MPMD} == "yes" ] ; then
340       set_xio_using_server iodef.xml true
341    else
342       set_xio_using_server iodef.xml false
343    fi
344    cd ${SETTE_DIR}
345    . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
346
347    cd ${SETTE_DIR}
348    export TEST_NAME="SHORT"
349    . ./prepare_exe_dir.sh
350    cd ${EXE_DIR}
351    set_namelist namelist_cfg cn_exp \"VORTEX_SHORT\"
352    set_namelist namelist_cfg nn_it000 61
353    set_namelist namelist_cfg nn_itend 120
354    set_namelist namelist_cfg nn_stock 60
355    set_namelist namelist_cfg ln_rstart .true.
356    set_namelist namelist_cfg nn_rstctl 2
357    set_namelist namelist_cfg cn_ocerst_in \"VORTEX_LONG_00000060_restart\"
358    if [ ${USING_MPMD} == "yes" ] ; then
359       set_xio_using_server iodef.xml true
360    else
361       set_xio_using_server iodef.xml false
362    fi
363    ln -sf ../LONG/VORTEX_LONG_00000060_restart.nc .
364    if [ ${USING_MPMD} == "yes" ] ; then
365       set_xio_using_server iodef.xml true
366    else
367       set_xio_using_server iodef.xml false
368    fi
369    cd ${SETTE_DIR}
370    . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
371    cd ${SETTE_DIR}
372    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
373
374
375    ## Test for all advection, vert. coordinates, vector form, flux form: test runability and complete all time steps
376    ## Needed namelist-xxxx for every type of run tested
377    cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
378
379    for file in $(echo `ls namelist_*_cfg `) ; do
380        TEST_NAME=`ls $file | sed -e "s/namelist_//" | sed -e "s/_cfg//"`
381        TEST_NAME="EXP-${TEST_NAME}"
382        `mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME}`
383        export TEST_NAME="${TEST_NAME}"
384         ## 
385        cd ${SETTE_DIR}
386        . ./param.cfg
387        . ./all_functions.sh
388        . ./prepare_exe_dir.sh
389        JOB_FILE=${EXE_DIR}/run_job.sh
390        NPROC=1
391        if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
392        cd ${EXE_DIR}
393        if [ ${USING_MPMD} == "yes" ] ; then
394           set_xio_using_server iodef.xml true
395        else
396           set_xio_using_server iodef.xml false
397        fi
398        cd ${SETTE_DIR}
399        . ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
400        cd ${SETTE_DIR}
401        . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
402       ##
403    done
404fi
405
[9458]406
407# TESTS FOR SAS_BIPER CONFIGURATION
408if [ ${config} -eq 5 ] ;  then 
[9509]409## Restartability tests for SAS_BIPER
[9458]410    export TEST_NAME="LONG"
411    cd ${CONFIG_DIR0}
412    . ./makenemo -m ${CMP_NAM} -n SAS_BIPER_ST -r SAS_BIPER -a TEST_CASES -j 8  del_key ${DEL_KEYS}
413    cd ${SETTE_DIR}
414    . ./param.cfg
415    . ./all_functions.sh
416    . ./prepare_exe_dir.sh
417    JOB_FILE=${EXE_DIR}/run_job.sh
418    NPROC=1
419    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
420    cd ${EXE_DIR}
421    set_namelist namelist_cfg cn_exp \"SAS_BIPER_LONG\"
422    set_namelist namelist_cfg nn_it000 1
423    set_namelist namelist_cfg nn_itend 200
424    set_namelist namelist_cfg nn_stock 100
425   
[9509]426    #set_namelist namelist_ice_cfg ln_icethd .true.
[9458]427    set_namelist namelist_ice_cfg ln_icedyn .true.
428    set_namelist namelist_ice_cfg ln_dynFULL .true.
429    set_namelist namelist_ice_cfg ln_dynRHGADV .false.
430    set_namelist namelist_ice_cfg ln_dynADV .false.
431   
432    set_namelist 1_namelist_cfg cn_exp \"SAS_BIPER_LONG\"
433    set_namelist 1_namelist_cfg nn_it000 1
434    set_namelist 1_namelist_cfg nn_itend 600
435    set_namelist 1_namelist_cfg nn_stock 300
436   
[9509]437    #set_namelist 1_namelist_ice_cfg ln_icethd .true.
[9458]438    set_namelist 1_namelist_ice_cfg ln_icedyn .true.
439    set_namelist 1_namelist_ice_cfg ln_dynFULL .true.
440    set_namelist 1_namelist_ice_cfg ln_dynRHGADV .false.
441    set_namelist 1_namelist_ice_cfg ln_dynADV .false.
442    if [ ${USING_MPMD} == "yes" ] ; then
443        set_xio_using_server iodef.xml true
444    else
445        set_xio_using_server iodef.xml false
446    fi
447    cd ${SETTE_DIR}
448    . ./prepare_job.sh input_SASBIPER.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
449   
450    cd ${SETTE_DIR}
451    export TEST_NAME="SHORT"
452    . ./prepare_exe_dir.sh
453    cd ${EXE_DIR}
454    set_namelist namelist_cfg cn_exp \"SAS_BIPER_SHORT\"
455    set_namelist namelist_cfg nn_it000 101
456    set_namelist namelist_cfg nn_itend 200
457    set_namelist namelist_cfg nn_stock 100
458    set_namelist namelist_cfg ln_rstart .true.
459    set_namelist namelist_cfg nn_rstctl 2
460   
[9509]461    #set_namelist namelist_ice_cfg ln_icethd .true.
[9458]462    set_namelist namelist_ice_cfg ln_icedyn .true.
463    set_namelist namelist_ice_cfg ln_dynFULL .true.
464    set_namelist namelist_ice_cfg ln_dynRHGADV .false.
465    set_namelist namelist_ice_cfg ln_dynADV .false.
466    set_namelist namelist_cfg cn_ocerst_in \"SAS_BIPER_LONG_00000100_restart\"
467    set_namelist namelist_ice_cfg cn_icerst_in \"SAS_BIPER_LONG_00000100_restart_ice\"
468   
469    set_namelist 1_namelist_cfg cn_exp \"SAS_BIPER_SHORT\"
470    set_namelist 1_namelist_cfg nn_it000 301
471    set_namelist 1_namelist_cfg nn_itend 600
472    set_namelist 1_namelist_cfg nn_stock 300
473    set_namelist 1_namelist_cfg ln_rstart .true.
474    set_namelist 1_namelist_cfg nn_rstctl 2
475   
[9509]476    #set_namelist 1_namelist_ice_cfg ln_icethd .true.
[9458]477    set_namelist 1_namelist_ice_cfg ln_icedyn .true.
478    set_namelist 1_namelist_ice_cfg ln_dynFULL .true.
479    set_namelist 1_namelist_ice_cfg ln_dynRHGADV .false.
480    set_namelist 1_namelist_ice_cfg ln_dynADV .false.
481    set_namelist 1_namelist_cfg cn_ocerst_in \"SAS_BIPER_LONG_00000300_restart\"
482    set_namelist 1_namelist_ice_cfg cn_icerst_in \"SAS_BIPER_LONG_00000300_restart_ice\"
483   
484   
485    if [ ${USING_MPMD} == "yes" ] ; then
486        set_xio_using_server iodef.xml true
487    else
488        set_xio_using_server iodef.xml false
489    fi
490    if [ $NPROC -eq 1 ] ;  then
491        ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart.nc .
492        ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart_ice.nc .
493        ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart.nc .
494        ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart_ice.nc .
495    else
496        for (( i=1; i<=$NPROC; i++)) ; do
497            L_NPROC=$(( $i - 1 ))
498            L_NPROC=`printf "%04d\n" ${L_NPROC}`
499            ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart_${L_NPROC}.nc .
500            ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart_ice_${L_NPROC}.nc .
501            ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart_${L_NPROC}.nc .
502            ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart_ice_${L_NPROC}.nc .
503        done
504    fi
505    if [ ${USING_MPMD} == "yes" ] ; then
506        set_xio_using_server iodef.xml true
507    else
508        set_xio_using_server iodef.xml false
509    fi
510    if [ $NPROC -eq 1 ] ;  then
511        ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart.nc .
512        ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart_ice.nc .
513   ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart.nc .
514        ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart_ice.nc .
515    else
516        for (( i=1; i<=$NPROC; i++)) ; do
517            L_NPROC=$(( $i - 1 ))
518            L_NPROC=`printf "%04d\n" ${L_NPROC}`
519            ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart_${L_NPROC}.nc .
520            ln -sf ../LONG/SAS_BIPER_LONG_00000100_restart_ice_${L_NPROC}.nc .
521            ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart_${L_NPROC}.nc .
522            ln -sf ../LONG/1_SAS_BIPER_LONG_00000300_restart_ice_${L_NPROC}.nc .
523        done
524    fi
525    if [ ${USING_MPMD} == "yes" ] ; then
526        set_xio_using_server iodef.xml true
527    else
528        set_xio_using_server iodef.xml false
529    fi
530    cd ${SETTE_DIR}
531    . ./prepare_job.sh input_SASBIPER.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
532    cd ${SETTE_DIR}
533    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
534   
535fi
536
[9518]537# ------
538# ISOMIP
539# ------
540if [ ${config} -eq 6 ] ;  then
541## Restartability tests
542    export TEST_NAME="LONG"
543    cd ${CONFIG_DIR0}
544    . ./makenemo -m ${CMP_NAM} -n ISOMIP_ST -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
545    cd ${SETTE_DIR}
546    . ./param.cfg
547    . ./all_functions.sh
548    . ./prepare_exe_dir.sh
549    JOB_FILE=${EXE_DIR}/run_job.sh
550    NPROC=15
551    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
552    cd ${EXE_DIR}
553    set_namelist namelist_cfg cn_exp \"ISOMIP_LONG\"
554    set_namelist namelist_cfg nn_it000 1
555    set_namelist namelist_cfg nn_itend 96
556    set_namelist namelist_cfg nn_stock 48
557    set_namelist namelist_cfg jpni 5
558    set_namelist namelist_cfg jpnj 3
559    set_namelist namelist_cfg jpnij 15
560    if [ ${USING_MPMD} == "yes" ] ; then
561       set_xio_using_server iodef.xml true
562    else
563       set_xio_using_server iodef.xml false
564    fi
565    cd ${SETTE_DIR}
566    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
567
568    cd ${SETTE_DIR}
569    export TEST_NAME="SHORT"
570    . ./prepare_exe_dir.sh
571    cd ${EXE_DIR}
572    set_namelist namelist_cfg cn_exp \"ISOMIP_SHORT\"
573    set_namelist namelist_cfg nn_it000 49
574    set_namelist namelist_cfg nn_itend 96
575    set_namelist namelist_cfg nn_stock 48
576    set_namelist namelist_cfg ln_rstart .true.
577    set_namelist namelist_cfg nn_rstctl 2
578    set_namelist namelist_cfg jpni 5
579    set_namelist namelist_cfg jpnj 3
580    set_namelist namelist_cfg jpnij 15
581    set_namelist namelist_cfg cn_ocerst_in \"ISOMIP_LONG_00000048_restart\"
582    if [ ${USING_MPMD} == "yes" ] ; then
583       set_xio_using_server iodef.xml true
584    else
585       set_xio_using_server iodef.xml false
586    fi
587    for (( i=1; i<=$NPROC; i++)) ; do
588        L_NPROC=$(( $i - 1 ))
589        L_NPROC=`printf "%04d\n" ${L_NPROC}`
590        ln -sf ../LONG/ISOMIP_LONG_00000048_restart_${L_NPROC}.nc .
591    done
592    if [ ${USING_MPMD} == "yes" ] ; then
593       set_xio_using_server iodef.xml true
594    else
595       set_xio_using_server iodef.xml false
596    fi
597    cd ${SETTE_DIR}
598    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
599    cd ${SETTE_DIR}
600    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
601
602## Reproducibility tests
603    export TEST_NAME="REPRO_7_3"
604    cd ${CONFIG_DIR0}
605    cd ${SETTE_DIR}
606    . ./param.cfg
607    . ./all_functions.sh
608    . ./prepare_exe_dir.sh
609    JOB_FILE=${EXE_DIR}/run_job.sh
610    NPROC=21
611    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
612    cd ${EXE_DIR}
613    set_namelist namelist_cfg cn_exp \"ISOMIP_73\"
614    set_namelist namelist_cfg nn_it000 1
615    set_namelist namelist_cfg nn_itend 48
616    set_namelist namelist_cfg jpni 7
617    set_namelist namelist_cfg jpnj 3
618    set_namelist namelist_cfg jpnij 21
619    if [ ${USING_MPMD} == "yes" ] ; then
620       set_xio_using_server iodef.xml true
621    else
622       set_xio_using_server iodef.xml false
623    fi
624    cd ${SETTE_DIR}
625    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
626    cd ${SETTE_DIR}
627    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
628
629    cd ${SETTE_DIR}
630    export TEST_NAME="REPRO_8_4"
631    . ./prepare_exe_dir.sh
632    JOB_FILE=${EXE_DIR}/run_job.sh
633    NPROC=32
634    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
635    cd ${EXE_DIR}
636    set_namelist namelist_cfg cn_exp \"ISOMIP_84\"
637    set_namelist namelist_cfg nn_it000 1
638    set_namelist namelist_cfg nn_itend 48
639    set_namelist namelist_cfg jpni 8
640    set_namelist namelist_cfg jpnj 4
641    set_namelist namelist_cfg jpnij 32
642    if [ ${USING_MPMD} == "yes" ] ; then
643       set_xio_using_server iodef.xml true
644    else
645       set_xio_using_server iodef.xml false
646    fi
647    cd ${SETTE_DIR}
648    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
649    cd ${SETTE_DIR}
650    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
651
652fi
653
[9458]654#----
[9268]655done
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