1 | MODULE bio_med_diag_trc_mod |
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2 | !!====================================================================== |
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3 | !! *** MODULE bio_med_diag_trc_mod *** |
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4 | !! Calculates diagnostics |
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5 | !!====================================================================== |
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6 | !! History : |
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7 | !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 |
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8 | !!---------------------------------------------------------------------- |
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9 | #if defined key_medusa |
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10 | !!---------------------------------------------------------------------- |
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11 | !! MEDUSA bio-model |
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12 | !!---------------------------------------------------------------------- |
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13 | |
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14 | IMPLICIT NONE |
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15 | PRIVATE |
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16 | |
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17 | PUBLIC bio_med_diag_trc ! Called in bio_medusa_diag.F90 |
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18 | |
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19 | !!---------------------------------------------------------------------- |
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20 | !! NEMO/TOP 2.0 , LOCEAN-IPSL (2007) |
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21 | !! $Id$ |
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22 | !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) |
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23 | !!---------------------------------------------------------------------- |
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24 | |
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25 | CONTAINS |
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26 | |
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27 | SUBROUTINE bio_med_diag_trc( jk ) |
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28 | !!------------------------------------------------------------------- |
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29 | !! *** ROUTINE bio_med_diag_trc *** |
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30 | !! Calculates diagnostics without using iom_use |
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31 | !!------------------------------------------------------------------- |
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32 | USE bio_medusa_mod |
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33 | USE dom_oce, ONLY: e3t_0, e3t_n, mbathy, tmask |
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34 | USE in_out_manager, ONLY: lwp, numout |
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35 | USE par_oce, ONLY: jpim1, jpjm1 |
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36 | USE phycst, ONLY: rsmall |
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37 | USE sbc_oce, ONLY: qsr, wndm |
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38 | USE sms_medusa, ONLY: f2_ccd_arg, f2_ccd_cal, & |
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39 | f3_omarg, f3_omcal, f3_pH, & |
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40 | i0100, i0150, i0200, i0500, i1000, & |
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41 | jdms, ocal_ccd, & |
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42 | xbetac, xbetan, xpar, xphi, & |
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43 | xthetapd, xthetapn, xthetazme, & |
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44 | xthetazmi, xze |
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45 | USE trc, ONLY: med_diag, trc2d, trc3d |
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46 | |
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47 | !!* Substitution |
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48 | # include "domzgr_substitute.h90" |
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49 | |
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50 | !! level |
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51 | INTEGER, INTENT( in ) :: jk |
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52 | |
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53 | !! Loop avariables |
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54 | INTEGER :: ji, jj, jn |
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55 | |
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56 | !! |
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57 | !! ** Without using iom_use |
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58 | # if defined key_debug_medusa |
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59 | IF (lwp) write (numout,*) 'trc_bio_medusa: diag in ij-jj-jk ln_diatrc' |
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60 | CALL flush(numout) |
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61 | # endif |
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62 | DO jj = 2,jpjm1 |
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63 | DO ji = 2,jpim1 |
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64 | IF (tmask(ji,jj,jk) == 1) then |
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65 | !!------------------------------------------------------- |
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66 | !! Prepare 2D diagnostics |
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67 | !!------------------------------------------------------- |
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68 | !! |
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69 | !! if ((kt / 240*240).eq.kt) then |
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70 | !! IF (lwp) write (*,*) '*******!MEDUSA DIAADD!*******',kt |
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71 | !! endif |
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72 | !! nitrogen inventory |
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73 | trc2d(ji,jj,1) = ftot_n(ji,jj) |
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74 | !! silicon inventory |
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75 | trc2d(ji,jj,2) = ftot_si(ji,jj) |
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76 | !! iron inventory |
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77 | trc2d(ji,jj,3) = ftot_fe(ji,jj) |
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78 | ENDIF |
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79 | ENDDO |
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80 | ENDDO |
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81 | |
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82 | DO jj = 2,jpjm1 |
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83 | DO ji = 2,jpim1 |
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84 | IF (tmask(ji,jj,jk) == 1) THEN |
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85 | !! non-diatom production |
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86 | trc2d(ji,jj,4) = trc2d(ji,jj,4) + & |
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87 | (fprn(ji,jj) * zphn(ji,jj) * & |
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88 | fse3t(ji,jj,jk)) |
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89 | !! non-diatom non-grazing losses |
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90 | trc2d(ji,jj,5) = trc2d(ji,jj,5) + & |
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91 | (fdpn(ji,jj) * fse3t(ji,jj,jk)) |
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92 | !! diatom production |
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93 | trc2d(ji,jj,6) = trc2d(ji,jj,6) + & |
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94 | (fprd(ji,jj) * zphd(ji,jj) * & |
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95 | fse3t(ji,jj,jk)) |
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96 | !! diatom non-grazing losses |
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97 | !! diagnostic field 8 is (ostensibly) supplied by trcsed.F |
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98 | trc2d(ji,jj,7) = trc2d(ji,jj,7) + & |
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99 | (fdpd(ji,jj) * fse3t(ji,jj,jk)) |
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100 | !! diatom silicon production |
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101 | trc2d(ji,jj,9) = trc2d(ji,jj,9) + & |
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102 | (fprds(ji,jj) * zpds(ji,jj) * & |
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103 | fse3t(ji,jj,jk)) |
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104 | !! diatom silicon dissolution |
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105 | trc2d(ji,jj,10) = trc2d(ji,jj,10) + & |
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106 | (fsdiss(ji,jj) * fse3t(ji,jj,jk)) |
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107 | ENDIF |
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108 | ENDDO |
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109 | ENDDO |
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110 | |
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111 | DO jj = 2,jpjm1 |
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112 | DO ji = 2,jpim1 |
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113 | IF (tmask(ji,jj,jk) == 1) THEN |
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114 | !! microzoo grazing on non-diatoms |
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115 | trc2d(ji,jj,11) = trc2d(ji,jj,11) + & |
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116 | (fgmipn(ji,jj) * fse3t(ji,jj,jk)) |
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117 | !! microzoo grazing on detrital nitrogen |
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118 | trc2d(ji,jj,12) = trc2d(ji,jj,12) + & |
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119 | (fgmid(ji,jj) * fse3t(ji,jj,jk)) |
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120 | !! microzoo non-grazing losses |
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121 | trc2d(ji,jj,13) = trc2d(ji,jj,13) + & |
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122 | (fdzmi(ji,jj) * fse3t(ji,jj,jk)) |
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123 | ENDIF |
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124 | ENDDO |
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125 | ENDDO |
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126 | |
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127 | DO jj = 2,jpjm1 |
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128 | DO ji = 2,jpim1 |
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129 | IF (tmask(ji,jj,jk) == 1) THEN |
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130 | !! mesozoo grazing on non-diatoms |
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131 | trc2d(ji,jj,14) = trc2d(ji,jj,14) + & |
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132 | (fgmepn(ji,jj) * fse3t(ji,jj,jk)) |
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133 | !! mesozoo grazing on diatoms |
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134 | trc2d(ji,jj,15) = trc2d(ji,jj,15) + & |
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135 | (fgmepd(ji,jj) * fse3t(ji,jj,jk)) |
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136 | !! mesozoo grazing on microzoo |
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137 | trc2d(ji,jj,16) = trc2d(ji,jj,16) + & |
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138 | (fgmezmi(ji,jj) * fse3t(ji,jj,jk)) |
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139 | !! mesozoo grazing on detrital nitrogen |
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140 | trc2d(ji,jj,17) = trc2d(ji,jj,17) + & |
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141 | (fgmed(ji,jj) * fse3t(ji,jj,jk)) |
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142 | !! mesozoo non-grazing losses |
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143 | trc2d(ji,jj,18) = trc2d(ji,jj,18) + & |
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144 | (fdzme(ji,jj) * fse3t(ji,jj,jk)) |
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145 | ENDIF |
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146 | ENDDO |
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147 | ENDDO |
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148 | |
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149 | DO jj = 2,jpjm1 |
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150 | DO ji = 2,jpim1 |
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151 | IF (tmask(ji,jj,jk) == 1) THEN |
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152 | !! diagnostic field 19 is (ostensibly) supplied by trcexp.F |
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153 | !! slow sinking detritus N production |
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154 | trc2d(ji,jj,20) = trc2d(ji,jj,20) + & |
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155 | (fslown(ji,jj) * fse3t(ji,jj,jk)) |
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156 | !! detrital remineralisation |
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157 | trc2d(ji,jj,21) = trc2d(ji,jj,21) + & |
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158 | (fdd(ji,jj) * fse3t(ji,jj,jk)) |
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159 | !! aeolian iron addition |
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160 | trc2d(ji,jj,22) = trc2d(ji,jj,22) + & |
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161 | (ffetop(ji,jj) * fse3t(ji,jj,jk)) |
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162 | !! seafloor iron addition |
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163 | trc2d(ji,jj,23) = trc2d(ji,jj,23) + & |
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164 | (ffebot(ji,jj) * fse3t(ji,jj,jk)) |
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165 | !! "free" iron scavenging |
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166 | trc2d(ji,jj,24) = trc2d(ji,jj,24) + & |
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167 | (ffescav(ji,jj) * fse3t(ji,jj,jk)) |
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168 | ENDIF |
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169 | ENDDO |
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170 | ENDDO |
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171 | |
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172 | DO jj = 2,jpjm1 |
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173 | DO ji = 2,jpim1 |
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174 | IF (tmask(ji,jj,jk) == 1) THEN |
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175 | !! non-diatom J limitation term |
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176 | trc2d(ji,jj,25) = trc2d(ji,jj,25) + & |
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177 | (fjlim_pn(ji,jj) * zphn(ji,jj) * & |
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178 | fse3t(ji,jj,jk)) |
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179 | !! non-diatom N limitation term |
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180 | trc2d(ji,jj,26) = trc2d(ji,jj,26) + & |
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181 | (fnln(ji,jj) * zphn(ji,jj) * & |
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182 | fse3t(ji,jj,jk)) |
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183 | !! non-diatom Fe limitation term |
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184 | trc2d(ji,jj,27) = trc2d(ji,jj,27) + & |
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185 | (ffln2(ji,jj) * zphn(ji,jj) * & |
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186 | fse3t(ji,jj,jk)) |
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187 | !! diatom J limitation term |
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188 | trc2d(ji,jj,28) = trc2d(ji,jj,28) + & |
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189 | (fjlim_pd(ji,jj) * zphd(ji,jj) * & |
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190 | fse3t(ji,jj,jk)) |
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191 | !! diatom N limitation term |
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192 | trc2d(ji,jj,29) = trc2d(ji,jj,29) + & |
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193 | (fnld(ji,jj) * zphd(ji,jj) * & |
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194 | fse3t(ji,jj,jk)) |
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195 | !! diatom Fe limitation term |
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196 | trc2d(ji,jj,30) = trc2d(ji,jj,30) + & |
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197 | (ffld(ji,jj) * zphd(ji,jj) * & |
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198 | fse3t(ji,jj,jk)) |
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199 | !! diatom Si limitation term |
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200 | trc2d(ji,jj,31) = trc2d(ji,jj,31) + & |
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201 | (fsld2(ji,jj) * zphd(ji,jj) * & |
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202 | fse3t(ji,jj,jk)) |
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203 | !! diatom Si uptake limitation term |
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204 | trc2d(ji,jj,32) = trc2d(ji,jj,32) + & |
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205 | (fsld(ji,jj) * zphd(ji,jj) * & |
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206 | fse3t(ji,jj,jk)) |
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207 | ENDIF |
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208 | ENDDO |
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209 | ENDDO |
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210 | |
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211 | IF (jk.eq.i0100) THEN |
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212 | DO jj = 2,jpjm1 |
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213 | DO ji = 2,jpim1 |
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214 | IF (tmask(ji,jj,jk) == 1) THEN |
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215 | !! slow detritus flux at 100 m |
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216 | trc2d(ji,jj,33) = fslownflux(ji,jj) |
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217 | ENDIF |
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218 | ENDDO |
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219 | ENDDO |
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220 | ENDIF |
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221 | |
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222 | IF (jk.eq.i0200) THEN |
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223 | DO jj = 2,jpjm1 |
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224 | DO ji = 2,jpim1 |
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225 | IF (tmask(ji,jj,jk) == 1) THEN |
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226 | !! slow detritus flux at 200 m |
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227 | trc2d(ji,jj,34) = fslownflux(ji,jj) |
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228 | ENDIF |
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229 | ENDDO |
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230 | ENDDO |
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231 | ENDIF |
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232 | |
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233 | IF (jk.eq.i0500) THEN |
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234 | DO jj = 2,jpjm1 |
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235 | DO ji = 2,jpim1 |
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236 | IF (tmask(ji,jj,jk) == 1) THEN |
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237 | !! slow detritus flux at 500 m |
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238 | trc2d(ji,jj,35) = fslownflux(ji,jj) |
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239 | ENDIF |
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240 | ENDDO |
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241 | ENDDO |
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242 | ENDIF |
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243 | |
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244 | IF (jk.eq.i1000) THEN |
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245 | DO jj = 2,jpjm1 |
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246 | DO ji = 2,jpim1 |
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247 | IF (tmask(ji,jj,jk) == 1) THEN |
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248 | !! slow detritus flux at 1000 m |
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249 | trc2d(ji,jj,36) = fslownflux(ji,jj) |
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250 | ENDIF |
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251 | ENDDO |
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252 | ENDDO |
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253 | ENDIF |
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254 | |
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255 | DO jj = 2,jpjm1 |
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256 | DO ji = 2,jpim1 |
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257 | IF (tmask(ji,jj,jk) == 1) THEN |
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258 | !! non-fast N full column regeneration |
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259 | trc2d(ji,jj,37) = trc2d(ji,jj,37) + fregen(ji,jj) |
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260 | !! non-fast Si full column regeneration |
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261 | trc2d(ji,jj,38) = trc2d(ji,jj,38) + fregensi(ji,jj) |
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262 | !! non-fast N regeneration to 100 m |
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263 | ENDIF |
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264 | ENDDO |
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265 | ENDDO |
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266 | |
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267 | IF (jk.eq.i0100) THEN |
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268 | DO jj = 2,jpjm1 |
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269 | DO ji = 2,jpim1 |
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270 | IF (tmask(ji,jj,jk) == 1) THEN |
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271 | trc2d(ji,jj,39) = trc2d(ji,jj,37) |
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272 | ENDIF |
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273 | ENDDO |
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274 | ENDDO |
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275 | ENDIF |
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276 | |
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277 | IF (jk.eq.i0200) THEN |
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278 | DO jj = 2,jpjm1 |
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279 | DO ji = 2,jpim1 |
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280 | IF (tmask(ji,jj,jk) == 1) THEN |
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281 | !! non-fast N regeneration to 200 m |
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282 | trc2d(ji,jj,40) = trc2d(ji,jj,37) |
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283 | ENDIF |
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284 | ENDDO |
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285 | ENDDO |
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286 | ENDIF |
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287 | |
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288 | IF (jk.eq.i0500) THEN |
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289 | DO jj = 2,jpjm1 |
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290 | DO ji = 2,jpim1 |
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291 | IF (tmask(ji,jj,jk) == 1) THEN |
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292 | !! non-fast N regeneration to 500 m |
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293 | trc2d(ji,jj,41) = trc2d(ji,jj,37) |
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294 | ENDIF |
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295 | ENDDO |
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296 | ENDDO |
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297 | ENDIF |
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298 | |
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299 | IF (jk.eq.i1000) THEN |
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300 | DO jj = 2,jpjm1 |
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301 | DO ji = 2,jpim1 |
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302 | IF (tmask(ji,jj,jk) == 1) THEN |
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303 | !! non-fast N regeneration to 1000 m |
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304 | trc2d(ji,jj,42) = trc2d(ji,jj,37) |
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305 | ENDIF |
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306 | ENDDO |
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307 | ENDDO |
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308 | ENDIF |
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309 | |
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310 | DO jj = 2,jpjm1 |
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311 | DO ji = 2,jpim1 |
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312 | IF (tmask(ji,jj,jk) == 1) THEN |
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313 | !! fast sinking detritus N production |
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314 | trc2d(ji,jj,43) = trc2d(ji,jj,43) + & |
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315 | (ftempn(ji,jj) * fse3t(ji,jj,jk)) |
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316 | !! fast sinking detritus Si production |
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317 | trc2d(ji,jj,44) = trc2d(ji,jj,44) + & |
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318 | (ftempsi(ji,jj) * fse3t(ji,jj,jk)) |
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319 | !! fast sinking detritus Fe production |
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320 | trc2d(ji,jj,45) = trc2d(ji,jj,45) + & |
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321 | (ftempfe(ji,jj) * fse3t(ji,jj,jk)) |
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322 | !! fast sinking detritus C production |
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323 | trc2d(ji,jj,46) = trc2d(ji,jj,46) + & |
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324 | (ftempc(ji,jj) * fse3t(ji,jj,jk)) |
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325 | !! fast sinking detritus CaCO3 production |
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326 | trc2d(ji,jj,47) = trc2d(ji,jj,47) + & |
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327 | (ftempca(ji,jj) * fse3t(ji,jj,jk)) |
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328 | ENDIF |
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329 | ENDDO |
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330 | ENDDO |
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331 | |
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332 | IF (jk.eq.i0100) THEN |
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333 | DO jj = 2,jpjm1 |
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334 | DO ji = 2,jpim1 |
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335 | IF (tmask(ji,jj,jk) == 1) THEN |
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336 | !! fast detritus N flux at 100 m |
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337 | trc2d(ji,jj,48) = ffastn(ji,jj) |
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338 | ENDIF |
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339 | ENDDO |
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340 | ENDDO |
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341 | ENDIF |
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342 | |
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343 | IF (jk.eq.i0200) THEN |
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344 | DO jj = 2,jpjm1 |
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345 | DO ji = 2,jpim1 |
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346 | IF (tmask(ji,jj,jk) == 1) THEN |
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347 | !! fast detritus N flux at 200 m |
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348 | trc2d(ji,jj,49) = ffastn(ji,jj) |
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349 | ENDIF |
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350 | ENDDO |
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351 | ENDDO |
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352 | ENDIF |
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353 | |
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354 | IF (jk.eq.i0500) THEN |
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355 | DO jj = 2,jpjm1 |
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356 | DO ji = 2,jpim1 |
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357 | IF (tmask(ji,jj,jk) == 1) THEN |
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358 | !! fast detritus N flux at 500 m |
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359 | trc2d(ji,jj,50) = ffastn(ji,jj) |
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360 | ENDIF |
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361 | ENDDO |
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362 | ENDDO |
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363 | ENDIF |
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364 | |
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365 | IF (jk.eq.i1000) THEN |
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366 | DO jj = 2,jpjm1 |
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367 | DO ji = 2,jpim1 |
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368 | IF (tmask(ji,jj,jk) == 1) THEN |
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369 | !! fast detritus N flux at 1000 m |
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370 | trc2d(ji,jj,51) = ffastn(ji,jj) |
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371 | ENDIF |
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372 | ENDDO |
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373 | ENDDO |
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374 | ENDIF |
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375 | |
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376 | IF (jk.eq.i0100) THEN |
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377 | DO jj = 2,jpjm1 |
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378 | DO ji = 2,jpim1 |
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379 | IF (tmask(ji,jj,jk) == 1) THEN |
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380 | !! N regeneration to 100 m |
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381 | trc2d(ji,jj,52) = fregenfast(ji,jj) |
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382 | ENDIF |
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383 | ENDDO |
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384 | ENDDO |
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385 | ENDIF |
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386 | |
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387 | IF (jk.eq.i0200) THEN |
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388 | DO jj = 2,jpjm1 |
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389 | DO ji = 2,jpim1 |
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390 | IF (tmask(ji,jj,jk) == 1) THEN |
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391 | !! N regeneration to 200 m |
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392 | trc2d(ji,jj,53) = fregenfast(ji,jj) |
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393 | ENDIF |
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394 | ENDDO |
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395 | ENDDO |
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396 | ENDIF |
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397 | |
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398 | IF (jk.eq.i0500) THEN |
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399 | DO jj = 2,jpjm1 |
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400 | DO ji = 2,jpim1 |
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401 | IF (tmask(ji,jj,jk) == 1) THEN |
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402 | !! N regeneration to 500 m |
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403 | trc2d(ji,jj,54) = fregenfast(ji,jj) |
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404 | ENDIF |
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405 | ENDDO |
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406 | ENDDO |
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407 | ENDIF |
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408 | |
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409 | IF (jk.eq.i1000) THEN |
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410 | DO jj = 2,jpjm1 |
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411 | DO ji = 2,jpim1 |
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412 | IF (tmask(ji,jj,jk) == 1) THEN |
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413 | !! N regeneration to 1000 m |
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414 | trc2d(ji,jj,55) = fregenfast(ji,jj) |
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415 | ENDIF |
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416 | ENDDO |
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417 | ENDDO |
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418 | ENDIF |
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419 | |
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420 | IF (jk.eq.i0100) THEN |
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421 | DO jj = 2,jpjm1 |
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422 | DO ji = 2,jpim1 |
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423 | IF (tmask(ji,jj,jk) == 1) THEN |
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424 | !! fast detritus Si flux at 100 m |
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425 | trc2d(ji,jj,56) = ffastsi(ji,jj) |
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426 | ENDIF |
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427 | ENDDO |
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428 | ENDDO |
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429 | ENDIF |
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430 | |
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431 | IF (jk.eq.i0200) THEN |
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432 | DO jj = 2,jpjm1 |
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433 | DO ji = 2,jpim1 |
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434 | IF (tmask(ji,jj,jk) == 1) THEN |
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435 | !! fast detritus Si flux at 200 m |
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436 | trc2d(ji,jj,57) = ffastsi(ji,jj) |
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437 | ENDIF |
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438 | ENDDO |
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439 | ENDDO |
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440 | ENDIF |
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441 | |
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442 | IF (jk.eq.i0500) THEN |
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443 | DO jj = 2,jpjm1 |
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444 | DO ji = 2,jpim1 |
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445 | IF (tmask(ji,jj,jk) == 1) THEN |
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446 | !! fast detritus Si flux at 500 m |
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447 | trc2d(ji,jj,58) = ffastsi(ji,jj) |
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448 | ENDIF |
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449 | ENDDO |
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450 | ENDDO |
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451 | ENDIF |
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452 | |
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453 | IF (jk.eq.i1000) THEN |
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454 | DO jj = 2,jpjm1 |
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455 | DO ji = 2,jpim1 |
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456 | IF (tmask(ji,jj,jk) == 1) THEN |
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457 | !! fast detritus Si flux at 1000 m |
---|
458 | trc2d(ji,jj,59) = ffastsi(ji,jj) |
---|
459 | ENDIF |
---|
460 | ENDDO |
---|
461 | ENDDO |
---|
462 | ENDIF |
---|
463 | |
---|
464 | IF (jk.eq.i0100) THEN |
---|
465 | DO jj = 2,jpjm1 |
---|
466 | DO ji = 2,jpim1 |
---|
467 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
468 | !! Si regeneration to 100 m |
---|
469 | trc2d(ji,jj,60) = fregenfastsi(ji,jj) |
---|
470 | ENDIF |
---|
471 | ENDDO |
---|
472 | ENDDO |
---|
473 | ENDIF |
---|
474 | |
---|
475 | IF (jk.eq.i0200) THEN |
---|
476 | DO jj = 2,jpjm1 |
---|
477 | DO ji = 2,jpim1 |
---|
478 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
479 | !! Si regeneration to 200 m |
---|
480 | trc2d(ji,jj,61) = fregenfastsi(ji,jj) |
---|
481 | ENDIF |
---|
482 | ENDDO |
---|
483 | ENDDO |
---|
484 | ENDIF |
---|
485 | |
---|
486 | IF (jk.eq.i0500) THEN |
---|
487 | DO jj = 2,jpjm1 |
---|
488 | DO ji = 2,jpim1 |
---|
489 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
490 | !! Si regeneration to 500 m |
---|
491 | trc2d(ji,jj,62) = fregenfastsi(ji,jj) |
---|
492 | ENDIF |
---|
493 | ENDDO |
---|
494 | ENDDO |
---|
495 | ENDIF |
---|
496 | |
---|
497 | IF (jk.eq.i1000) THEN |
---|
498 | DO jj = 2,jpjm1 |
---|
499 | DO ji = 2,jpim1 |
---|
500 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
501 | !! Si regeneration to 1000 m |
---|
502 | trc2d(ji,jj,63) = fregenfastsi(ji,jj) |
---|
503 | ENDIF |
---|
504 | ENDDO |
---|
505 | ENDDO |
---|
506 | ENDIF |
---|
507 | |
---|
508 | DO jj = 2,jpjm1 |
---|
509 | DO ji = 2,jpim1 |
---|
510 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
511 | !! sum of fast-sinking N fluxes |
---|
512 | trc2d(ji,jj,64) = trc2d(ji,jj,64) + & |
---|
513 | (freminn(ji,jj) * fse3t(ji,jj,jk)) |
---|
514 | !! sum of fast-sinking Si fluxes |
---|
515 | trc2d(ji,jj,65) = trc2d(ji,jj,65) + & |
---|
516 | (freminsi(ji,jj) * fse3t(ji,jj,jk)) |
---|
517 | !! sum of fast-sinking Fe fluxes |
---|
518 | trc2d(ji,jj,66) = trc2d(ji,jj,66) + & |
---|
519 | (freminfe(ji,jj) * fse3t(ji,jj,jk)) |
---|
520 | !! sum of fast-sinking C fluxes |
---|
521 | trc2d(ji,jj,67) = trc2d(ji,jj,67) + & |
---|
522 | (freminc(ji,jj) * fse3t(ji,jj,jk)) |
---|
523 | !! sum of fast-sinking Ca fluxes |
---|
524 | trc2d(ji,jj,68) = trc2d(ji,jj,68) + & |
---|
525 | (freminca(ji,jj) * fse3t(ji,jj,jk)) |
---|
526 | ENDIF |
---|
527 | ENDDO |
---|
528 | ENDDO |
---|
529 | |
---|
530 | |
---|
531 | DO jj = 2,jpjm1 |
---|
532 | DO ji = 2,jpim1 |
---|
533 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
534 | if (jk.eq.mbathy(ji,jj)) then |
---|
535 | !! N sedimentation flux |
---|
536 | trc2d(ji,jj,69) = fsedn(ji,jj) |
---|
537 | !! Si sedimentation flux |
---|
538 | trc2d(ji,jj,70) = fsedsi(ji,jj) |
---|
539 | !! Fe sedimentation flux |
---|
540 | trc2d(ji,jj,71) = fsedfe(ji,jj) |
---|
541 | !! C sedimentation flux |
---|
542 | trc2d(ji,jj,72) = fsedc(ji,jj) |
---|
543 | !! Ca sedimentation flux |
---|
544 | trc2d(ji,jj,73) = fsedca(ji,jj) |
---|
545 | endif |
---|
546 | ENDIF |
---|
547 | ENDDO |
---|
548 | ENDDO |
---|
549 | |
---|
550 | if (jk.eq.1) then |
---|
551 | DO jj = 2,jpjm1 |
---|
552 | DO ji = 2,jpim1 |
---|
553 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
554 | trc2d(ji,jj,74) = qsr(ji,jj) |
---|
555 | trc2d(ji,jj,75) = xpar(ji,jj,jk) |
---|
556 | !! trc2d(ji,jj,75) = real(iters(ji,jj)) |
---|
557 | ENDIF |
---|
558 | ENDDO |
---|
559 | ENDDO |
---|
560 | endif |
---|
561 | |
---|
562 | DO jj = 2,jpjm1 |
---|
563 | DO ji = 2,jpim1 |
---|
564 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
565 | !! diagnostic fields 76 to 80 calculated below |
---|
566 | !! mixed layer non-diatom production |
---|
567 | trc2d(ji,jj,81) = trc2d(ji,jj,81) + fprn_ml(ji,jj) |
---|
568 | !! mixed layer diatom production |
---|
569 | trc2d(ji,jj,82) = trc2d(ji,jj,82) + fprd_ml(ji,jj) |
---|
570 | ENDIF |
---|
571 | ENDDO |
---|
572 | ENDDO |
---|
573 | |
---|
574 | # if defined key_gulf_finland |
---|
575 | if (jk.eq.1) then |
---|
576 | DO jj = 2,jpjm1 |
---|
577 | DO ji = 2,jpim1 |
---|
578 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
579 | !! Gulf of Finland check |
---|
580 | trc2d(ji,jj,83) = real(ibio_switch) |
---|
581 | ENDIF |
---|
582 | ENDDO |
---|
583 | ENDDO |
---|
584 | endif |
---|
585 | # else |
---|
586 | DO jj = 2,jpjm1 |
---|
587 | DO ji = 2,jpim1 |
---|
588 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
589 | !! calcite CCD depth |
---|
590 | trc2d(ji,jj,83) = ocal_ccd(ji,jj) |
---|
591 | ENDIF |
---|
592 | ENDDO |
---|
593 | ENDDO |
---|
594 | # endif |
---|
595 | DO jj = 2,jpjm1 |
---|
596 | DO ji = 2,jpim1 |
---|
597 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
598 | !! last model level above calcite CCD depth |
---|
599 | trc2d(ji,jj,84) = fccd(ji,jj) |
---|
600 | ENDIF |
---|
601 | ENDDO |
---|
602 | ENDDO |
---|
603 | |
---|
604 | IF (jk.eq.1) THEN |
---|
605 | DO jj = 2,jpjm1 |
---|
606 | DO ji = 2,jpim1 |
---|
607 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
608 | !! surface "free" iron |
---|
609 | trc2d(ji,jj,85) = xFree(ji,jj) |
---|
610 | ENDIF |
---|
611 | ENDDO |
---|
612 | ENDDO |
---|
613 | ENDIF |
---|
614 | |
---|
615 | ! I'm keeping this the same as before for reproducibility, but it looks |
---|
616 | ! like it should be i0100 and not i0200 - marc 8/5/17 |
---|
617 | IF (jk.eq.i0200) THEN |
---|
618 | DO jj = 2,jpjm1 |
---|
619 | DO ji = 2,jpim1 |
---|
620 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
621 | !! "free" iron at 100 m |
---|
622 | trc2d(ji,jj,86) = xFree(ji,jj) |
---|
623 | ENDIF |
---|
624 | ENDDO |
---|
625 | ENDDO |
---|
626 | ENDIF |
---|
627 | |
---|
628 | |
---|
629 | IF (jk.eq.i0200) THEN |
---|
630 | DO jj = 2,jpjm1 |
---|
631 | DO ji = 2,jpim1 |
---|
632 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
633 | !! "free" iron at 200 m |
---|
634 | trc2d(ji,jj,87) = xFree(ji,jj) |
---|
635 | ENDIF |
---|
636 | ENDDO |
---|
637 | ENDDO |
---|
638 | ENDIF |
---|
639 | |
---|
640 | |
---|
641 | IF (jk.eq.i0500) THEN |
---|
642 | DO jj = 2,jpjm1 |
---|
643 | DO ji = 2,jpim1 |
---|
644 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
645 | !! "free" iron at 500 m |
---|
646 | trc2d(ji,jj,88) = xFree(ji,jj) |
---|
647 | ENDIF |
---|
648 | ENDDO |
---|
649 | ENDDO |
---|
650 | ENDIF |
---|
651 | |
---|
652 | |
---|
653 | IF (jk.eq.i1000) THEN |
---|
654 | DO jj = 2,jpjm1 |
---|
655 | DO ji = 2,jpim1 |
---|
656 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
657 | !! "free" iron at 1000 m |
---|
658 | trc2d(ji,jj,89) = xFree(ji,jj) |
---|
659 | ENDIF |
---|
660 | ENDDO |
---|
661 | ENDDO |
---|
662 | ENDIF |
---|
663 | |
---|
664 | |
---|
665 | IF (jk.eq.1) THEN |
---|
666 | DO jj = 2,jpjm1 |
---|
667 | DO ji = 2,jpim1 |
---|
668 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
669 | !! AXY (27/06/12): extract "euphotic depth" |
---|
670 | trc2d(ji,jj,90) = xze(ji,jj) |
---|
671 | ENDIF |
---|
672 | ENDDO |
---|
673 | ENDDO |
---|
674 | ENDIF |
---|
675 | |
---|
676 | # if defined key_roam |
---|
677 | if (jk .eq. 1) then |
---|
678 | DO jj = 2,jpjm1 |
---|
679 | DO ji = 2,jpim1 |
---|
680 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
681 | !! ROAM provisionally has access to a further 20 2D |
---|
682 | !! diagnostics |
---|
683 | !! surface wind |
---|
684 | trc2d(ji,jj,91) = trc2d(ji,jj,91) + wndm(ji,jj) |
---|
685 | !! atmospheric pCO2 |
---|
686 | trc2d(ji,jj,92) = trc2d(ji,jj,92) + f_pco2atm(ji,jj) |
---|
687 | !! ocean pH |
---|
688 | trc2d(ji,jj,93) = trc2d(ji,jj,93) + f_ph(ji,jj) |
---|
689 | !! ocean pCO2 |
---|
690 | trc2d(ji,jj,94) = trc2d(ji,jj,94) + f_pco2w(ji,jj) |
---|
691 | !! ocean H2CO3 conc. |
---|
692 | trc2d(ji,jj,95) = trc2d(ji,jj,95) + f_h2co3(ji,jj) |
---|
693 | !! ocean HCO3 conc. |
---|
694 | trc2d(ji,jj,96) = trc2d(ji,jj,96) + f_hco3(ji,jj) |
---|
695 | !! ocean CO3 conc. |
---|
696 | trc2d(ji,jj,97) = trc2d(ji,jj,97) + f_co3(ji,jj) |
---|
697 | !! air-sea CO2 flux |
---|
698 | trc2d(ji,jj,98) = trc2d(ji,jj,98) + f_co2flux(ji,jj) |
---|
699 | ENDIF |
---|
700 | ENDDO |
---|
701 | ENDDO |
---|
702 | |
---|
703 | DO jj = 2,jpjm1 |
---|
704 | DO ji = 2,jpim1 |
---|
705 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
706 | !! ocean omega calcite |
---|
707 | trc2d(ji,jj,99) = trc2d(ji,jj,99) + f_omcal(ji,jj) |
---|
708 | !! ocean omega aragonite |
---|
709 | trc2d(ji,jj,100) = trc2d(ji,jj,100) + f_omarg(ji,jj) |
---|
710 | !! ocean TDIC |
---|
711 | trc2d(ji,jj,101) = trc2d(ji,jj,101) + f_TDIC(ji,jj) |
---|
712 | !! ocean TALK |
---|
713 | trc2d(ji,jj,102) = trc2d(ji,jj,102) + f_TALK(ji,jj) |
---|
714 | !! surface kw660 |
---|
715 | trc2d(ji,jj,103) = trc2d(ji,jj,103) + f_kw660(ji,jj) |
---|
716 | !! surface pressure |
---|
717 | trc2d(ji,jj,104) = trc2d(ji,jj,104) + f_pp0(ji,jj) |
---|
718 | !! air-sea O2 flux |
---|
719 | trc2d(ji,jj,105) = trc2d(ji,jj,105) + f_o2flux(ji,jj) |
---|
720 | !! ocean O2 saturation |
---|
721 | trc2d(ji,jj,106) = trc2d(ji,jj,106) + f_o2sat(ji,jj) |
---|
722 | !! depth calcite CCD |
---|
723 | trc2d(ji,jj,107) = f2_ccd_cal(ji,jj) |
---|
724 | !! depth aragonite CCD |
---|
725 | trc2d(ji,jj,108) = f2_ccd_arg(ji,jj) |
---|
726 | ENDIF |
---|
727 | ENDDO |
---|
728 | ENDDO |
---|
729 | endif |
---|
730 | |
---|
731 | DO jj = 2,jpjm1 |
---|
732 | DO ji = 2,jpim1 |
---|
733 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
734 | if (jk .eq. mbathy(ji,jj)) then |
---|
735 | !! seafloor omega calcite |
---|
736 | trc2d(ji,jj,109) = f3_omcal(ji,jj,jk) |
---|
737 | !! seafloor omega aragonite |
---|
738 | trc2d(ji,jj,110) = f3_omarg(ji,jj,jk) |
---|
739 | endif |
---|
740 | ENDIF |
---|
741 | ENDDO |
---|
742 | ENDDO |
---|
743 | |
---|
744 | if (jk.eq.i0100) then |
---|
745 | DO jj = 2,jpjm1 |
---|
746 | DO ji = 2,jpim1 |
---|
747 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
748 | !! diagnostic fields 111 to 117 calculated below |
---|
749 | !! rain ratio at 100 m |
---|
750 | trc2d(ji,jj,118) = & |
---|
751 | ffastca(ji,jj)/MAX(ffastc(ji,jj), rsmall) |
---|
752 | ENDIF |
---|
753 | ENDDO |
---|
754 | ENDDO |
---|
755 | endif |
---|
756 | |
---|
757 | if (jk.eq.i0500) then |
---|
758 | DO jj = 2,jpjm1 |
---|
759 | DO ji = 2,jpim1 |
---|
760 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
761 | !! rain ratio at 500 m |
---|
762 | trc2d(ji,jj,119) = & |
---|
763 | ffastca(ji,jj)/MAX(ffastc(ji,jj), rsmall) |
---|
764 | ENDIF |
---|
765 | ENDDO |
---|
766 | ENDDO |
---|
767 | endif |
---|
768 | |
---|
769 | if (jk.eq.i1000) then |
---|
770 | DO jj = 2,jpjm1 |
---|
771 | DO ji = 2,jpim1 |
---|
772 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
773 | !! rain ratio at 1000 m |
---|
774 | trc2d(ji,jj,120) = & |
---|
775 | ffastca(ji,jj)/MAX(ffastc(ji,jj), rsmall) |
---|
776 | ENDIF |
---|
777 | ENDDO |
---|
778 | ENDDO |
---|
779 | endif |
---|
780 | |
---|
781 | DO jj = 2,jpjm1 |
---|
782 | DO ji = 2,jpim1 |
---|
783 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
784 | if (jk.eq.mbathy(ji,jj)) then |
---|
785 | !! AXY (18/01/12): benthic flux diagnostics |
---|
786 | trc2d(ji,jj,121) = f_sbenin_n(ji,jj) + f_fbenin_n(ji,jj) |
---|
787 | trc2d(ji,jj,122) = f_sbenin_fe(ji,jj) + f_fbenin_fe(ji,jj) |
---|
788 | trc2d(ji,jj,123) = f_sbenin_c(ji,jj) + f_fbenin_c(ji,jj) |
---|
789 | trc2d(ji,jj,124) = f_fbenin_si(ji,jj) |
---|
790 | trc2d(ji,jj,125) = f_fbenin_ca(ji,jj) |
---|
791 | trc2d(ji,jj,126) = f_benout_n(ji,jj) |
---|
792 | trc2d(ji,jj,127) = f_benout_fe(ji,jj) |
---|
793 | trc2d(ji,jj,128) = f_benout_c(ji,jj) |
---|
794 | trc2d(ji,jj,129) = f_benout_si(ji,jj) |
---|
795 | trc2d(ji,jj,130) = f_benout_ca(ji,jj) |
---|
796 | endif |
---|
797 | ENDIF |
---|
798 | ENDDO |
---|
799 | ENDDO |
---|
800 | |
---|
801 | DO jj = 2,jpjm1 |
---|
802 | DO ji = 2,jpim1 |
---|
803 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
804 | !! diagnostics fields 131 to 135 calculated below |
---|
805 | trc2d(ji,jj,136) = f_runoff(ji,jj) |
---|
806 | !! AXY (19/07/12): amended to allow for riverine |
---|
807 | !! nutrient addition below surface |
---|
808 | trc2d(ji,jj,137) = trc2d(ji,jj,137) + & |
---|
809 | (f_riv_loc_n(ji,jj) * fse3t(ji,jj,jk)) |
---|
810 | trc2d(ji,jj,138) = trc2d(ji,jj,138) + & |
---|
811 | (f_riv_loc_si(ji,jj) * fse3t(ji,jj,jk)) |
---|
812 | trc2d(ji,jj,139) = trc2d(ji,jj,139) + & |
---|
813 | (f_riv_loc_c(ji,jj) * fse3t(ji,jj,jk)) |
---|
814 | trc2d(ji,jj,140) = trc2d(ji,jj,140) + & |
---|
815 | (f_riv_loc_alk(ji,jj) * fse3t(ji,jj,jk)) |
---|
816 | !! slow sinking detritus C production |
---|
817 | trc2d(ji,jj,141) = trc2d(ji,jj,141) + & |
---|
818 | (fslowc(ji,jj) * fse3t(ji,jj,jk)) |
---|
819 | ENDIF |
---|
820 | ENDDO |
---|
821 | ENDDO |
---|
822 | |
---|
823 | if (jk.eq.i0100) then |
---|
824 | DO jj = 2,jpjm1 |
---|
825 | DO ji = 2,jpim1 |
---|
826 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
827 | !! slow detritus flux at 100 m |
---|
828 | trc2d(ji,jj,142) = fslowcflux(ji,jj) |
---|
829 | ENDIF |
---|
830 | ENDDO |
---|
831 | ENDDO |
---|
832 | endif |
---|
833 | |
---|
834 | if (jk.eq.i0200) then |
---|
835 | DO jj = 2,jpjm1 |
---|
836 | DO ji = 2,jpim1 |
---|
837 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
838 | !! slow detritus flux at 200 m |
---|
839 | trc2d(ji,jj,143) = fslowcflux(ji,jj) |
---|
840 | ENDIF |
---|
841 | ENDDO |
---|
842 | ENDDO |
---|
843 | endif |
---|
844 | |
---|
845 | |
---|
846 | if (jk.eq.i0500) then |
---|
847 | DO jj = 2,jpjm1 |
---|
848 | DO ji = 2,jpim1 |
---|
849 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
850 | !! slow detritus flux at 500 m |
---|
851 | trc2d(ji,jj,144) = fslowcflux(ji,jj) |
---|
852 | ENDIF |
---|
853 | ENDDO |
---|
854 | ENDDO |
---|
855 | endif |
---|
856 | |
---|
857 | |
---|
858 | if (jk.eq.i1000) then |
---|
859 | DO jj = 2,jpjm1 |
---|
860 | DO ji = 2,jpim1 |
---|
861 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
862 | !! slow detritus flux at 1000 m |
---|
863 | trc2d(ji,jj,145) = fslowcflux(ji,jj) |
---|
864 | ENDIF |
---|
865 | ENDDO |
---|
866 | ENDDO |
---|
867 | endif |
---|
868 | |
---|
869 | DO jj = 2,jpjm1 |
---|
870 | DO ji = 2,jpim1 |
---|
871 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
872 | !! carbon inventory |
---|
873 | trc2d(ji,jj,146) = trc2d(ji,jj,146) + ftot_c(ji,jj) |
---|
874 | !! alkalinity inventory |
---|
875 | trc2d(ji,jj,147) = trc2d(ji,jj,147) + ftot_a(ji,jj) |
---|
876 | !! oxygen inventory |
---|
877 | trc2d(ji,jj,148) = trc2d(ji,jj,148) + ftot_o2(ji,jj) |
---|
878 | |
---|
879 | if (jk.eq.mbathy(ji,jj)) then |
---|
880 | trc2d(ji,jj,149) = f_benout_lyso_ca(ji,jj) |
---|
881 | endif |
---|
882 | |
---|
883 | !! community respiration |
---|
884 | trc2d(ji,jj,150) = fcomm_resp(ji,jj) * fse3t(ji,jj,jk) |
---|
885 | ENDIF |
---|
886 | ENDDO |
---|
887 | ENDDO |
---|
888 | |
---|
889 | DO jj = 2,jpjm1 |
---|
890 | DO ji = 2,jpim1 |
---|
891 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
892 | !! |
---|
893 | !! AXY (14/02/14): a Valentines Day gift to BASIN - a |
---|
894 | !! shedload of new diagnostics that |
---|
895 | !! they'll most likely never need! |
---|
896 | !! (actually, as with all such gifts, |
---|
897 | !! I'm giving them some things I'd like |
---|
898 | !! myself!) |
---|
899 | !! |
---|
900 | !! ------------------------------------------------------ |
---|
901 | !! linear losses |
---|
902 | !! non-diatom |
---|
903 | trc2d(ji,jj,151) = trc2d(ji,jj,151) + & |
---|
904 | (fdpn2(ji,jj) * fse3t(ji,jj,jk)) |
---|
905 | !! diatom |
---|
906 | trc2d(ji,jj,152) = trc2d(ji,jj,152) + & |
---|
907 | (fdpd2(ji,jj) * fse3t(ji,jj,jk)) |
---|
908 | !! microzooplankton |
---|
909 | trc2d(ji,jj,153) = trc2d(ji,jj,153) + & |
---|
910 | (fdzmi2(ji,jj) * fse3t(ji,jj,jk)) |
---|
911 | !! mesozooplankton |
---|
912 | trc2d(ji,jj,154) = trc2d(ji,jj,154) + & |
---|
913 | (fdzme2(ji,jj) * fse3t(ji,jj,jk)) |
---|
914 | ENDIF |
---|
915 | ENDDO |
---|
916 | ENDDO |
---|
917 | |
---|
918 | DO jj = 2,jpjm1 |
---|
919 | DO ji = 2,jpim1 |
---|
920 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
921 | !! ------------------------------------------------------ |
---|
922 | !! microzooplankton grazing |
---|
923 | !! microzooplankton messy -> N |
---|
924 | trc2d(ji,jj,155) = trc2d(ji,jj,155) + & |
---|
925 | (xphi * (fgmipn(ji,jj) + & |
---|
926 | fgmid(ji,jj)) * fse3t(ji,jj,jk)) |
---|
927 | !! microzooplankton messy -> D |
---|
928 | trc2d(ji,jj,156) = trc2d(ji,jj,156) + & |
---|
929 | ((1. - xbetan) * finmi(ji,jj) * & |
---|
930 | fse3t(ji,jj,jk)) |
---|
931 | !! microzooplankton messy -> DIC |
---|
932 | trc2d(ji,jj,157) = trc2d(ji,jj,157) + & |
---|
933 | (xphi * ((xthetapn * fgmipn(ji,jj)) + & |
---|
934 | fgmidc(ji,jj)) * & |
---|
935 | fse3t(ji,jj,jk)) |
---|
936 | !! microzooplankton messy -> Dc |
---|
937 | trc2d(ji,jj,158) = trc2d(ji,jj,158) + & |
---|
938 | ((1. - xbetac) * ficmi(ji,jj) * & |
---|
939 | fse3t(ji,jj,jk)) |
---|
940 | !! microzooplankton excretion |
---|
941 | trc2d(ji,jj,159) = trc2d(ji,jj,159) + & |
---|
942 | (fmiexcr(ji,jj) * fse3t(ji,jj,jk)) |
---|
943 | !! microzooplankton respiration |
---|
944 | trc2d(ji,jj,160) = trc2d(ji,jj,160) + & |
---|
945 | (fmiresp(ji,jj) * fse3t(ji,jj,jk)) |
---|
946 | !! microzooplankton growth |
---|
947 | trc2d(ji,jj,161) = trc2d(ji,jj,161) + & |
---|
948 | (fmigrow(ji,jj) * fse3t(ji,jj,jk)) |
---|
949 | ENDIF |
---|
950 | ENDDO |
---|
951 | ENDDO |
---|
952 | |
---|
953 | DO jj = 2,jpjm1 |
---|
954 | DO ji = 2,jpim1 |
---|
955 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
956 | !! ------------------------------------------------------ |
---|
957 | !! mesozooplankton grazing |
---|
958 | !! mesozooplankton messy -> N |
---|
959 | trc2d(ji,jj,162) = trc2d(ji,jj,162) + & |
---|
960 | (xphi * & |
---|
961 | (fgmepn(ji,jj) + fgmepd(ji,jj) + & |
---|
962 | fgmezmi(ji,jj) + fgmed(ji,jj)) * & |
---|
963 | fse3t(ji,jj,jk)) |
---|
964 | !! mesozooplankton messy -> D |
---|
965 | trc2d(ji,jj,163) = trc2d(ji,jj,163) + & |
---|
966 | ((1. - xbetan) * finme(ji,jj) * & |
---|
967 | fse3t(ji,jj,jk)) |
---|
968 | !! mesozooplankton messy -> DIC |
---|
969 | trc2d(ji,jj,164) = trc2d(ji,jj,164) + & |
---|
970 | (xphi * & |
---|
971 | ((xthetapn * fgmepn(ji,jj)) + & |
---|
972 | (xthetapd * fgmepd(ji,jj)) + & |
---|
973 | (xthetazmi * fgmezmi(ji,jj)) + & |
---|
974 | fgmedc(ji,jj)) * fse3t(ji,jj,jk)) |
---|
975 | !! mesozooplankton messy -> Dc |
---|
976 | trc2d(ji,jj,165) = trc2d(ji,jj,165) + & |
---|
977 | ((1. - xbetac) * ficme(ji,jj) * & |
---|
978 | fse3t(ji,jj,jk)) |
---|
979 | !! mesozooplankton excretion |
---|
980 | trc2d(ji,jj,166) = trc2d(ji,jj,166) + & |
---|
981 | (fmeexcr(ji,jj) * fse3t(ji,jj,jk)) |
---|
982 | !! mesozooplankton respiration |
---|
983 | trc2d(ji,jj,167) = trc2d(ji,jj,167) + & |
---|
984 | (fmeresp(ji,jj) * fse3t(ji,jj,jk)) |
---|
985 | !! mesozooplankton growth |
---|
986 | trc2d(ji,jj,168) = trc2d(ji,jj,168) + & |
---|
987 | (fmegrow(ji,jj) * fse3t(ji,jj,jk)) |
---|
988 | ENDIF |
---|
989 | ENDDO |
---|
990 | ENDDO |
---|
991 | |
---|
992 | DO jj = 2,jpjm1 |
---|
993 | DO ji = 2,jpim1 |
---|
994 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
995 | !! ------------------------------------------------------ |
---|
996 | !! miscellaneous |
---|
997 | !! detrital C remineralisation |
---|
998 | trc2d(ji,jj,169) = trc2d(ji,jj,169) + & |
---|
999 | (fddc(ji,jj) * fse3t(ji,jj,jk)) |
---|
1000 | !! microzoo grazing on detrital carbon |
---|
1001 | trc2d(ji,jj,170) = trc2d(ji,jj,170) + & |
---|
1002 | (fgmidc(ji,jj) * fse3t(ji,jj,jk)) |
---|
1003 | !! mesozoo grazing on detrital carbon |
---|
1004 | trc2d(ji,jj,171) = trc2d(ji,jj,171) + & |
---|
1005 | (fgmedc(ji,jj) * fse3t(ji,jj,jk)) |
---|
1006 | !! |
---|
1007 | ENDIF |
---|
1008 | ENDDO |
---|
1009 | ENDDO |
---|
1010 | |
---|
1011 | !! ------------------------------------------------------ |
---|
1012 | !! |
---|
1013 | !! AXY (23/10/14): extract primary production related |
---|
1014 | !! surface fields to deal with diel |
---|
1015 | !! cycle issues; hijacking BASIN 150m |
---|
1016 | !! diagnostics to do so (see commented |
---|
1017 | !! out diagnostics below this section) |
---|
1018 | !! |
---|
1019 | !! extract relevant BASIN fields at 150m |
---|
1020 | if (jk .eq. i0150) then |
---|
1021 | DO jj = 2,jpjm1 |
---|
1022 | DO ji = 2,jpim1 |
---|
1023 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
1024 | !! Pn PP |
---|
1025 | trc2d(ji,jj,172) = trc2d(ji,jj,4) |
---|
1026 | !! Pn linear loss |
---|
1027 | trc2d(ji,jj,173) = trc2d(ji,jj,151) |
---|
1028 | !! Pn non-linear loss |
---|
1029 | trc2d(ji,jj,174) = trc2d(ji,jj,5) |
---|
1030 | !! Pn grazing to Zmi |
---|
1031 | trc2d(ji,jj,175) = trc2d(ji,jj,11) |
---|
1032 | !! Pn grazing to Zme |
---|
1033 | trc2d(ji,jj,176) = trc2d(ji,jj,14) |
---|
1034 | !! Pd PP |
---|
1035 | trc2d(ji,jj,177) = trc2d(ji,jj,6) |
---|
1036 | !! Pd linear loss |
---|
1037 | trc2d(ji,jj,178) = trc2d(ji,jj,152) |
---|
1038 | !! Pd non-linear loss |
---|
1039 | trc2d(ji,jj,179) = trc2d(ji,jj,7) |
---|
1040 | !! Pd grazing to Zme |
---|
1041 | trc2d(ji,jj,180) = trc2d(ji,jj,15) |
---|
1042 | !! Zmi grazing on D |
---|
1043 | trc2d(ji,jj,181) = trc2d(ji,jj,12) |
---|
1044 | !! Zmi grazing on Dc |
---|
1045 | trc2d(ji,jj,182) = trc2d(ji,jj,170) |
---|
1046 | !! Zmi messy feeding loss to N |
---|
1047 | trc2d(ji,jj,183) = trc2d(ji,jj,155) |
---|
1048 | !! Zmi messy feeding loss to D |
---|
1049 | trc2d(ji,jj,184) = trc2d(ji,jj,156) |
---|
1050 | !! Zmi messy feeding loss to DIC |
---|
1051 | trc2d(ji,jj,185) = trc2d(ji,jj,157) |
---|
1052 | !! Zmi messy feeding loss to Dc |
---|
1053 | trc2d(ji,jj,186) = trc2d(ji,jj,158) |
---|
1054 | !! Zmi excretion |
---|
1055 | trc2d(ji,jj,187) = trc2d(ji,jj,159) |
---|
1056 | !! Zmi respiration |
---|
1057 | trc2d(ji,jj,188) = trc2d(ji,jj,160) |
---|
1058 | !! Zmi growth |
---|
1059 | trc2d(ji,jj,189) = trc2d(ji,jj,161) |
---|
1060 | !! Zmi linear loss |
---|
1061 | trc2d(ji,jj,190) = trc2d(ji,jj,153) |
---|
1062 | !! Zmi non-linear loss |
---|
1063 | trc2d(ji,jj,191) = trc2d(ji,jj,13) |
---|
1064 | !! Zmi grazing to Zme |
---|
1065 | trc2d(ji,jj,192) = trc2d(ji,jj,16) |
---|
1066 | !! Zme grazing on D |
---|
1067 | trc2d(ji,jj,193) = trc2d(ji,jj,17) |
---|
1068 | !! Zme grazing on Dc |
---|
1069 | trc2d(ji,jj,194) = trc2d(ji,jj,171) |
---|
1070 | !! Zme messy feeding loss to N |
---|
1071 | trc2d(ji,jj,195) = trc2d(ji,jj,162) |
---|
1072 | !! Zme messy feeding loss to D |
---|
1073 | trc2d(ji,jj,196) = trc2d(ji,jj,163) |
---|
1074 | !! Zme messy feeding loss to DIC |
---|
1075 | trc2d(ji,jj,197) = trc2d(ji,jj,164) |
---|
1076 | !! Zme messy feeding loss to Dc |
---|
1077 | trc2d(ji,jj,198) = trc2d(ji,jj,165) |
---|
1078 | !! Zme excretion |
---|
1079 | trc2d(ji,jj,199) = trc2d(ji,jj,166) |
---|
1080 | !! Zme respiration |
---|
1081 | trc2d(ji,jj,200) = trc2d(ji,jj,167) |
---|
1082 | !! Zme growth |
---|
1083 | trc2d(ji,jj,201) = trc2d(ji,jj,168) |
---|
1084 | !! Zme linear loss |
---|
1085 | trc2d(ji,jj,202) = trc2d(ji,jj,154) |
---|
1086 | !! Zme non-linear loss |
---|
1087 | trc2d(ji,jj,203) = trc2d(ji,jj,18) |
---|
1088 | !! Slow detritus production, N |
---|
1089 | trc2d(ji,jj,204) = trc2d(ji,jj,20) |
---|
1090 | !! Slow detritus remineralisation, N |
---|
1091 | trc2d(ji,jj,205) = trc2d(ji,jj,21) |
---|
1092 | !! Slow detritus production, C |
---|
1093 | trc2d(ji,jj,206) = trc2d(ji,jj,141) |
---|
1094 | !! Slow detritus remineralisation, C |
---|
1095 | trc2d(ji,jj,207) = trc2d(ji,jj,169) |
---|
1096 | !! Fast detritus production, N |
---|
1097 | trc2d(ji,jj,208) = trc2d(ji,jj,43) |
---|
1098 | !! Fast detritus remineralisation, N |
---|
1099 | trc2d(ji,jj,209) = trc2d(ji,jj,21) |
---|
1100 | !! Fast detritus production, C |
---|
1101 | trc2d(ji,jj,210) = trc2d(ji,jj,64) |
---|
1102 | !! Fast detritus remineralisation, C |
---|
1103 | trc2d(ji,jj,211) = trc2d(ji,jj,67) |
---|
1104 | !! Community respiration |
---|
1105 | trc2d(ji,jj,212) = trc2d(ji,jj,150) |
---|
1106 | !! Slow detritus N flux at 150 m |
---|
1107 | trc2d(ji,jj,213) = fslownflux(ji,jj) |
---|
1108 | !! Slow detritus C flux at 150 m |
---|
1109 | trc2d(ji,jj,214) = fslowcflux(ji,jj) |
---|
1110 | !! Fast detritus N flux at 150 m |
---|
1111 | trc2d(ji,jj,215) = ffastn(ji,jj) |
---|
1112 | !! Fast detritus C flux at 150 m |
---|
1113 | trc2d(ji,jj,216) = ffastc(ji,jj) |
---|
1114 | ENDIF |
---|
1115 | ENDDO |
---|
1116 | ENDDO |
---|
1117 | endif |
---|
1118 | |
---|
1119 | !! |
---|
1120 | !! Jpalm (11-08-2014) |
---|
1121 | !! Add UKESM1 diagnoatics |
---|
1122 | !!^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
---|
1123 | if ((jk .eq. 1) .and.( jdms.eq.1)) then |
---|
1124 | DO jj = 2,jpjm1 |
---|
1125 | DO ji = 2,jpim1 |
---|
1126 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
1127 | !! DMS surface concentration |
---|
1128 | trc2d(ji,jj,221) = dms_surf(ji,jj) |
---|
1129 | !! AXY (13/03/15): add in other DMS estimates |
---|
1130 | !! DMS surface concentration |
---|
1131 | trc2d(ji,jj,222) = dms_andr(ji,jj) |
---|
1132 | !! DMS surface concentration |
---|
1133 | trc2d(ji,jj,223) = dms_simo(ji,jj) |
---|
1134 | !! DMS surface concentration |
---|
1135 | trc2d(ji,jj,224) = dms_aran(ji,jj) |
---|
1136 | !! DMS surface concentration |
---|
1137 | trc2d(ji,jj,225) = dms_hall(ji,jj) |
---|
1138 | !! DMS surface concentration |
---|
1139 | trc2d(ji,jj,226) = dms_andm(ji,jj) |
---|
1140 | ENDIF |
---|
1141 | ENDDO |
---|
1142 | ENDDO |
---|
1143 | endif |
---|
1144 | # endif |
---|
1145 | |
---|
1146 | DO jj = 2,jpjm1 |
---|
1147 | DO ji = 2,jpim1 |
---|
1148 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
1149 | !! other possible future diagnostics include: |
---|
1150 | !! - integrated tracer values (esp. biological) |
---|
1151 | !! - mixed layer tracer values |
---|
1152 | !! - sub-surface chlorophyll maxima (plus depth) |
---|
1153 | !! - different mixed layer depth criteria (T, sigma, |
---|
1154 | !! var. sigma) |
---|
1155 | !!------------------------------------------------------- |
---|
1156 | !! Prepare 3D diagnostics |
---|
1157 | !!------------------------------------------------------- |
---|
1158 | !! |
---|
1159 | !! primary production |
---|
1160 | trc3d(ji,jj,jk,1) = ((fprn(ji,jj) + fprd(ji,jj)) * & |
---|
1161 | zphn(ji,jj)) |
---|
1162 | !! detrital flux |
---|
1163 | trc3d(ji,jj,jk,2) = fslownflux(ji,jj) + ffastn(ji,jj) |
---|
1164 | !! remineralisation |
---|
1165 | trc3d(ji,jj,jk,3) = fregen(ji,jj) + & |
---|
1166 | (freminn(ji,jj) * fse3t(ji,jj,jk)) |
---|
1167 | ENDIF |
---|
1168 | ENDDO |
---|
1169 | ENDDO |
---|
1170 | # if defined key_roam |
---|
1171 | DO jj = 2,jpjm1 |
---|
1172 | DO ji = 2,jpim1 |
---|
1173 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
1174 | !! pH |
---|
1175 | trc3d(ji,jj,jk,4) = f3_pH(ji,jj,jk) |
---|
1176 | !! omega calcite |
---|
1177 | trc3d(ji,jj,jk,5) = f3_omcal(ji,jj,jk) |
---|
1178 | ENDIF |
---|
1179 | ENDDO |
---|
1180 | ENDDO |
---|
1181 | # else |
---|
1182 | DO jj = 2,jpjm1 |
---|
1183 | DO ji = 2,jpim1 |
---|
1184 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
1185 | !! fast Si flux |
---|
1186 | trc3d(ji,jj,jk,4) = ffastsi(ji,jj) |
---|
1187 | ENDIF |
---|
1188 | ENDDO |
---|
1189 | ENDDO |
---|
1190 | # endif |
---|
1191 | |
---|
1192 | END SUBROUTINE bio_med_diag_trc |
---|
1193 | |
---|
1194 | #else |
---|
1195 | !!====================================================================== |
---|
1196 | !! Dummy module : No MEDUSA bio-model |
---|
1197 | !!====================================================================== |
---|
1198 | CONTAINS |
---|
1199 | SUBROUTINE bio_med_diag_trc( ) ! Empty routine |
---|
1200 | WRITE(*,*) 'bio_med_diag_trc: You should not have seen this print! error?' |
---|
1201 | END SUBROUTINE bio_med_diag_trc |
---|
1202 | #endif |
---|
1203 | |
---|
1204 | !!====================================================================== |
---|
1205 | END MODULE bio_med_diag_trc_mod |
---|