[9296] | 1 | MODULE asmbgc |
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[9297] | 2 | !!=========================================================================== |
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[9296] | 3 | !! *** MODULE asmbgc *** |
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| 4 | !! Routines and declarations for biogeochemical assimilation |
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[9297] | 5 | !!=========================================================================== |
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[9296] | 6 | !! History : 3.6 ! 2018-02 (D. Ford) Adapted from existing modules |
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[9297] | 7 | !!--------------------------------------------------------------------------- |
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[9296] | 8 | !! 'key_asminc' : assimilation increment interface |
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| 9 | !! 'key_top' : passive tracers |
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| 10 | !! 'key_hadocc' : HadOCC model |
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| 11 | !! 'key_medusa' : MEDUSA model |
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| 12 | !! 'key_roam' : MEDUSA extras for carbonate cycle |
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| 13 | !! 'key_karaml' : Kara mixed layer depth |
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[9297] | 14 | !!--------------------------------------------------------------------------- |
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| 15 | !! asm_bgc_check_options : check bgc assimilation options |
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[9296] | 16 | !! asm_bgc_init_incs : initialise bgc increments |
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| 17 | !! asm_bgc_init_bkg : initialise bgc background |
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[9297] | 18 | !! asm_bgc_bal_wri : write out bgc balancing increments |
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[9296] | 19 | !! asm_bgc_bkg_wri : write out bgc background |
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[13354] | 20 | !! asm_bgc_unlog_2d : calculate non-log versions of 2D log increments |
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| 21 | !! asm_bgc_unlog_3d : calculate non-log versions of 3D log increments |
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| 22 | !! phyto2d_asm_inc : apply the 2D phytoplankton increments |
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[9326] | 23 | !! phyto3d_asm_inc : apply the 3D phytoplankton increments |
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[9322] | 24 | !! pco2_asm_inc : apply the pCO2/fCO2 increments |
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| 25 | !! ph_asm_inc : apply the pH increments |
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| 26 | !! bgc3d_asm_inc : apply the generic 3D BGC increments |
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[9297] | 27 | !!--------------------------------------------------------------------------- |
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| 28 | USE par_kind, ONLY: & ! kind parameters |
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| 29 | & wp |
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| 30 | USE par_oce, ONLY: & ! domain array sizes |
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| 31 | & jpi, & |
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| 32 | & jpj, & |
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| 33 | & jpk |
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| 34 | USE iom ! i/o |
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| 35 | USE oce, ONLY: & ! active tracer variables |
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| 36 | & tsn |
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[13191] | 37 | USE zdfmxl, ONLY : & ! mixed layer depth |
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[9296] | 38 | #if defined key_karaml |
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[9297] | 39 | & hmld_kara, & |
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| 40 | & ln_kara, & |
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[13191] | 41 | #endif |
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| 42 | & hmld, & |
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[9297] | 43 | & hmlp, & |
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[13191] | 44 | & hmlpt |
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[9297] | 45 | USE asmpar, ONLY: & ! assimilation parameters |
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| 46 | & c_asmbkg, & |
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| 47 | & c_asmbal, & |
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| 48 | & nitbkg_r, & |
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| 49 | & nitdin_r, & |
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| 50 | & nitiaustr_r, & |
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| 51 | & nitiaufin_r |
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[9296] | 52 | #if defined key_top |
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[9297] | 53 | USE trc, ONLY: & ! passive tracer variables |
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| 54 | & trn, & |
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[9296] | 55 | & trb |
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[9297] | 56 | USE par_trc, ONLY: & ! passive tracer parameters |
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[9296] | 57 | & jptra |
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| 58 | #endif |
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[10141] | 59 | #if defined key_medusa |
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[13354] | 60 | USE asmphytobal_medusa, ONLY: & ! phytoplankton balancing for MEDUSA |
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| 61 | & asm_phyto_bal_medusa |
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[9297] | 62 | USE asmpco2bal, ONLY: & ! pCO2 balancing for MEDUSA |
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[9296] | 63 | & asm_pco2_bal |
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[9431] | 64 | USE sms_medusa ! MEDUSA parameters |
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[9297] | 65 | USE par_medusa ! MEDUSA parameters |
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[9381] | 66 | USE mocsy_wrapper, ONLY: & ! MEDUSA carbonate system |
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| 67 | & mocsy_interface |
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| 68 | USE mocsy_mainmod, ONLY: & ! fCO2 to pCO2 conversion |
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[9297] | 69 | & f2pCO2 |
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| 70 | USE sms_medusa, ONLY: & ! MEDUSA diagnostic variables |
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| 71 | & pgrow_avg, & |
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| 72 | & ploss_avg, & |
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| 73 | & phyt_avg, & |
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[13354] | 74 | & pgrow_avg_3d, & |
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| 75 | & ploss_avg_3d, & |
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| 76 | & phyt_avg_3d, & |
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[9297] | 77 | & mld_max |
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[9296] | 78 | #elif defined key_hadocc |
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[13354] | 79 | USE asmphytobal_hadocc, ONLY: & ! phytoplankton balancing for HadOCC |
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| 80 | & asm_phyto_bal_hadocc |
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[9297] | 81 | USE asmpco2bal, ONLY: & ! pCO2 balancing for HadOCC |
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[9296] | 82 | & asm_pco2_bal |
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[9297] | 83 | USE par_hadocc ! HadOCC parameters |
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[9326] | 84 | USE had_bgc_const ! HadOCC parameters |
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[9297] | 85 | USE trc, ONLY: & ! HadOCC diagnostic variables |
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| 86 | & pgrow_avg, & |
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| 87 | & ploss_avg, & |
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| 88 | & phyt_avg, & |
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[13354] | 89 | & pgrow_avg_3d, & |
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| 90 | & ploss_avg_3d, & |
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| 91 | & phyt_avg_3d, & |
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[9297] | 92 | & mld_max, & |
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| 93 | & HADOCC_CHL |
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| 94 | USE had_bgc_const, ONLY: & ! HadOCC C:Chl ratio |
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| 95 | & cchl_p |
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[9296] | 96 | #endif |
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| 97 | |
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| 98 | IMPLICIT NONE |
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[13191] | 99 | PRIVATE |
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[9296] | 100 | |
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[9322] | 101 | PUBLIC asm_bgc_check_options ! called by asm_inc_init in asminc.F90 |
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| 102 | PUBLIC asm_bgc_init_incs ! called by asm_inc_init in asminc.F90 |
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| 103 | PRIVATE asm_bgc_read_incs_2d ! called by asm_bgc_init_incs |
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| 104 | PRIVATE asm_bgc_read_incs_3d ! called by asm_bgc_init_incs |
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| 105 | PUBLIC asm_bgc_init_bkg ! called by asm_inc_init in asminc.F90 |
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| 106 | PUBLIC asm_bgc_bal_wri ! called by nemo_gcm in nemogcm.F90 |
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| 107 | PUBLIC asm_bgc_bkg_wri ! called by asm_bkg_wri in asmbkg.F90 |
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[13354] | 108 | PRIVATE asm_bgc_unlog_2d ! called by phyto2d_asm_inc |
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| 109 | PRIVATE asm_bgc_unlog_3d ! called by phyto3d_asm_inc |
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[9326] | 110 | PUBLIC phyto2d_asm_inc ! called by bgc_asm_inc in asminc.F90 |
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| 111 | PUBLIC phyto3d_asm_inc ! called by bgc_asm_inc in asminc.F90 |
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[9322] | 112 | PUBLIC pco2_asm_inc ! called by bgc_asm_inc in asminc.F90 |
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| 113 | PUBLIC ph_asm_inc ! called by bgc_asm_inc in asminc.F90 |
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| 114 | PUBLIC bgc3d_asm_inc ! called by bgc_asm_inc in asminc.F90 |
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[9296] | 115 | |
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[9322] | 116 | LOGICAL, PUBLIC :: ln_balwri = .FALSE. !: No output of balancing incs |
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| 117 | LOGICAL, PUBLIC :: ln_phytobal = .FALSE. !: No phytoplankton balancing |
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| 118 | LOGICAL, PUBLIC :: ln_slchltotinc = .FALSE. !: No surface total log10(chlorophyll) increment |
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| 119 | LOGICAL, PUBLIC :: ln_slchldiainc = .FALSE. !: No surface diatom log10(chlorophyll) increment |
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| 120 | LOGICAL, PUBLIC :: ln_slchlnoninc = .FALSE. !: No surface non-diatom log10(chlorophyll) increment |
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| 121 | LOGICAL, PUBLIC :: ln_schltotinc = .FALSE. !: No surface total chlorophyll increment |
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| 122 | LOGICAL, PUBLIC :: ln_slphytotinc = .FALSE. !: No surface total log10(phyto C) increment |
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| 123 | LOGICAL, PUBLIC :: ln_slphydiainc = .FALSE. !: No surface diatom log10(phyto C) increment |
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| 124 | LOGICAL, PUBLIC :: ln_slphynoninc = .FALSE. !: No surface non-diatom log10(phyto C) increment |
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| 125 | LOGICAL, PUBLIC :: ln_spco2inc = .FALSE. !: No surface pCO2 increment |
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| 126 | LOGICAL, PUBLIC :: ln_sfco2inc = .FALSE. !: No surface fCO2 increment |
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| 127 | LOGICAL, PUBLIC :: ln_plchltotinc = .FALSE. !: No profile total log10(chlorophyll) increment |
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| 128 | LOGICAL, PUBLIC :: ln_pchltotinc = .FALSE. !: No profile total chlorophyll increment |
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| 129 | LOGICAL, PUBLIC :: ln_pno3inc = .FALSE. !: No profile nitrate increment |
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| 130 | LOGICAL, PUBLIC :: ln_psi4inc = .FALSE. !: No profile silicate increment |
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| 131 | LOGICAL, PUBLIC :: ln_pdicinc = .FALSE. !: No profile dissolved inorganic carbon increment |
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| 132 | LOGICAL, PUBLIC :: ln_palkinc = .FALSE. !: No profile alkalinity increment |
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| 133 | LOGICAL, PUBLIC :: ln_pphinc = .FALSE. !: No profile pH increment |
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| 134 | LOGICAL, PUBLIC :: ln_po2inc = .FALSE. !: No profile oxygen increment |
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[9296] | 135 | |
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[9297] | 136 | INTEGER, PUBLIC :: mld_choice_bgc = 1 !: choice of mld for bgc assimilation |
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| 137 | ! 1) hmld - Turbocline/mixing depth |
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| 138 | ! [W points] |
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| 139 | ! 2) hmlp - Density criterion |
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| 140 | ! (0.01 kg/m^3 change from 10m) |
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| 141 | ! [W points] |
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| 142 | ! 3) hmld_kara - Kara MLD |
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| 143 | ! [Interpolated] |
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| 144 | ! 4) hmld_tref - Temperature criterion |
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| 145 | ! (0.2 K change from surface) |
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| 146 | ! [T points] |
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| 147 | ! 5) hmlpt - Density criterion |
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| 148 | ! (0.01 kg/m^3 change from 10m) |
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| 149 | ! [T points] |
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| 150 | |
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| 151 | REAL(wp), PUBLIC :: rn_maxchlinc = -999.0 !: maximum absolute non-log chlorophyll inc |
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| 152 | ! <= 0 no maximum applied (switch turned off) |
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| 153 | ! > 0 absolute chl inc capped at this value |
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| 154 | |
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| 155 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: slchltot_bkginc ! slchltot inc |
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[9322] | 156 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: slchldia_bkginc ! slchldia inc |
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| 157 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: slchlnon_bkginc ! slchlnon inc |
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| 158 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: schltot_bkginc ! schltot inc |
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| 159 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: slphytot_bkginc ! slphytot inc |
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| 160 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: slphydia_bkginc ! slphydia inc |
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| 161 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: slphynon_bkginc ! slphynon inc |
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| 162 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: sfco2_bkginc ! sfco2 inc |
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| 163 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: spco2_bkginc ! spco2 inc |
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| 164 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: plchltot_bkginc ! plchltot inc |
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| 165 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pchltot_bkginc ! pchltot inc |
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| 166 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pno3_bkginc ! pno3 inc |
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| 167 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: psi4_bkginc ! psi4 inc |
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| 168 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pdic_bkginc ! pdic inc |
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| 169 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: palk_bkginc ! palk inc |
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| 170 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pph_bkginc ! pph inc |
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| 171 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: po2_bkginc ! po2 inc |
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[9326] | 172 | REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: phyto2d_balinc ! Balancing incs from ocean colour |
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| 173 | REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: phyto3d_balinc ! Balancing incs from p(l)chltot |
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[9322] | 174 | REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: pco2_balinc ! Balancing incs from spco2/sfco2 |
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| 175 | REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: ph_balinc ! Balancing incs from pph |
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[9297] | 176 | |
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| 177 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: pgrow_avg_bkg ! Background phyto growth |
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| 178 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: ploss_avg_bkg ! Background phyto loss |
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| 179 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: phyt_avg_bkg ! Background phyto conc |
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[13354] | 180 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: pgrow_avg_3d_bkg ! Background phyto growth |
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| 181 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: ploss_avg_3d_bkg ! Background phyto loss |
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| 182 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: phyt_avg_3d_bkg ! Background phyto conc |
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[9297] | 183 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: mld_max_bkg ! Background max MLD |
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| 184 | REAL(wp), DIMENSION(:,:,:,:), ALLOCATABLE :: tracer_bkg ! Background tracer state |
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[9322] | 185 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: chl_bkg ! Background chl |
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| 186 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: cchl_p_bkg ! Background c:chl |
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[9296] | 187 | |
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[9381] | 188 | # include "domzgr_substitute.h90" |
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| 189 | |
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[9296] | 190 | CONTAINS |
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| 191 | |
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| 192 | SUBROUTINE asm_bgc_check_options |
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[9297] | 193 | !!------------------------------------------------------------------------ |
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[9296] | 194 | !! *** ROUTINE asm_bgc_check_options *** |
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| 195 | !! |
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| 196 | !! ** Purpose : check validity of biogeochemical assimilation options |
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| 197 | !! |
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| 198 | !! ** Method : check settings of logicals |
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| 199 | !! |
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| 200 | !! ** Action : call ctl_stop/ctl_warn if required |
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| 201 | !! |
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| 202 | !! References : asm_inc_init |
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[9297] | 203 | !!------------------------------------------------------------------------ |
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[9296] | 204 | |
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[10141] | 205 | #if ! defined key_top || ( ! defined key_hadocc && ! defined key_medusa ) |
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[9322] | 206 | CALL ctl_stop( ' Attempting to assimilate biogeochemical observations', & |
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| 207 | & ' but no compatible biogeochemical model is available' ) |
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| 208 | #endif |
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| 209 | |
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| 210 | #if defined key_hadocc |
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| 211 | IF ( ln_slchldiainc .OR. ln_slchlnoninc .OR. ln_slphydiainc .OR. & |
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| 212 | & ln_slphynoninc .OR. ln_psi4inc .OR. ln_pphinc .OR. ln_po2inc ) THEN |
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| 213 | CALL ctl_stop( ' Cannot assimilate PFTs, Si4, pH or O2 into HadOCC' ) |
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[9296] | 214 | ENDIF |
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[9322] | 215 | #endif |
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[9296] | 216 | |
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[10141] | 217 | #if defined key_medusa |
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| 218 | IF ( .NOT. ln_foam_medusa ) THEN |
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| 219 | CALL ctl_stop( ' MEDUSA data assimilation options not turned on: set ln_foam_medusa' ) |
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| 220 | ENDIF |
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| 221 | #endif |
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| 222 | |
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[9322] | 223 | IF ( ( ln_phytobal ).AND. & |
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| 224 | & ( .NOT. ln_slchltotinc ).AND.( .NOT. ln_slchldiainc ).AND. & |
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| 225 | & ( .NOT. ln_slchlnoninc ).AND.( .NOT. ln_schltotinc ).AND. & |
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| 226 | & ( .NOT. ln_slphytotinc ).AND.( .NOT. ln_slphydiainc ).AND. & |
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[13354] | 227 | & ( .NOT. ln_slphynoninc ).AND.( .NOT. ln_plchltotinc ).AND. & |
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| 228 | & ( .NOT. ln_pchltotinc ) ) THEN |
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[9322] | 229 | CALL ctl_warn( ' Cannot calculate phytoplankton balancing increments', & |
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[13354] | 230 | & ' if not assimilating phytoplankton,', & |
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[9322] | 231 | & ' so ln_phytobal will be set to .false.') |
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| 232 | ln_phytobal = .FALSE. |
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[9296] | 233 | ENDIF |
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| 234 | |
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[9381] | 235 | IF ( ( ln_balwri ).AND. & |
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| 236 | & ( .NOT. ln_slchltotinc ).AND.( .NOT. ln_slchldiainc ).AND. & |
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| 237 | & ( .NOT. ln_slchlnoninc ).AND.( .NOT. ln_schltotinc ).AND. & |
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| 238 | & ( .NOT. ln_slphytotinc ).AND.( .NOT. ln_slphydiainc ).AND. & |
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| 239 | & ( .NOT. ln_slphynoninc ).AND.( .NOT. ln_plchltotinc ).AND. & |
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| 240 | & ( .NOT. ln_pchltotinc ).AND.( .NOT. ln_pphinc ).AND. & |
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| 241 | & ( .NOT. ln_spco2inc ).AND.( .NOT. ln_sfco2inc ) ) THEN |
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| 242 | CALL ctl_warn( ' Balancing increments not being calculated', & |
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| 243 | & ' so ln_balwri will be set to .false.') |
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[9322] | 244 | ln_balwri = .FALSE. |
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| 245 | ENDIF |
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| 246 | |
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| 247 | IF ( ln_spco2inc .AND. ln_sfco2inc ) THEN |
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[9296] | 248 | CALL ctl_stop( ' Can only assimilate pCO2 OR fCO2, not both' ) |
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| 249 | ENDIF |
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| 250 | |
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[9322] | 251 | IF ( ln_slchltotinc .AND. ln_schltotinc ) THEN |
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| 252 | CALL ctl_stop( ' Can only assimilate surface log10(chlorophyll) or chlorophyll, not both' ) |
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| 253 | ENDIF |
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| 254 | |
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| 255 | IF ( ln_plchltotinc .AND. ln_pchltotinc ) THEN |
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| 256 | CALL ctl_stop( ' Can only assimilate profile log10(chlorophyll) or chlorophyll, not both' ) |
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| 257 | ENDIF |
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| 258 | |
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| 259 | IF ( ( ln_slchltotinc .OR. ln_schltotinc ) .AND. & |
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| 260 | & ( ln_slchldiainc .OR. ln_slchlnoninc ) ) THEN |
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| 261 | CALL ctl_stop( ' Can only assimilate total or PFT surface chlorophyll, not both' ) |
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| 262 | ENDIF |
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| 263 | |
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[9435] | 264 | IF ( ln_phytobal .AND. & |
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| 265 | & ( ( ln_slchlnoninc .AND.( .NOT. ln_slchldiainc ) ).OR. & |
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| 266 | & ( ln_slchldiainc .AND.( .NOT. ln_slchlnoninc ) ) ) ) THEN |
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| 267 | CALL ctl_stop( ' Cannot calculate phytoplankton balancing increments', & |
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| 268 | & ' unless assimilating all model PFTs,') |
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| 269 | ENDIF |
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| 270 | |
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[9322] | 271 | IF ( ln_slphytotinc .AND. ( ln_slphydiainc .OR. ln_slphynoninc ) ) THEN |
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| 272 | CALL ctl_stop( ' Can only assimilate total or PFT surface phytoplankton carbon, not both' ) |
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| 273 | ENDIF |
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| 274 | |
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[9435] | 275 | IF ( ln_phytobal .AND. & |
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| 276 | & ( ( ln_slphynoninc .AND.( .NOT. ln_slphydiainc ) ).OR. & |
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| 277 | & ( ln_slphydiainc .AND.( .NOT. ln_slphynoninc ) ) ) ) THEN |
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| 278 | CALL ctl_stop( ' Cannot calculate phytoplankton balancing increments', & |
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| 279 | & ' unless assimilating all model PFTs,') |
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| 280 | ENDIF |
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| 281 | |
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[9296] | 282 | END SUBROUTINE asm_bgc_check_options |
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| 283 | |
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[9297] | 284 | !!=========================================================================== |
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| 285 | !!=========================================================================== |
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| 286 | !!=========================================================================== |
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[9296] | 287 | |
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| 288 | SUBROUTINE asm_bgc_init_incs( knum ) |
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[9297] | 289 | !!------------------------------------------------------------------------ |
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[9296] | 290 | !! *** ROUTINE asm_bgc_init_incs *** |
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| 291 | !! |
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| 292 | !! ** Purpose : initialise bgc increments |
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| 293 | !! |
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| 294 | !! ** Method : allocate arrays and read increments from file |
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| 295 | !! |
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| 296 | !! ** Action : allocate arrays and read increments from file |
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| 297 | !! |
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| 298 | !! References : asm_inc_init |
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[9297] | 299 | !!------------------------------------------------------------------------ |
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[9296] | 300 | !! |
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| 301 | INTEGER, INTENT(in ) :: knum ! i/o unit of increments file |
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| 302 | !! |
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[9297] | 303 | !!------------------------------------------------------------------------ |
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[9296] | 304 | |
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[9322] | 305 | ! Allocate and read increments |
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[13191] | 306 | |
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[9296] | 307 | IF ( ln_slchltotinc ) THEN |
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| 308 | ALLOCATE( slchltot_bkginc(jpi,jpj) ) |
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[9322] | 309 | CALL asm_bgc_read_incs_2d( knum, 'bckinslchltot', slchltot_bkginc ) |
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| 310 | ENDIF |
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[13191] | 311 | |
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[9322] | 312 | IF ( ln_slchldiainc ) THEN |
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| 313 | ALLOCATE( slchldia_bkginc(jpi,jpj) ) |
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| 314 | CALL asm_bgc_read_incs_2d( knum, 'bckinslchldia', slchldia_bkginc ) |
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| 315 | ENDIF |
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[13191] | 316 | |
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[9322] | 317 | IF ( ln_slchlnoninc ) THEN |
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| 318 | ALLOCATE( slchlnon_bkginc(jpi,jpj) ) |
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| 319 | CALL asm_bgc_read_incs_2d( knum, 'bckinslchlnon', slchlnon_bkginc ) |
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| 320 | ENDIF |
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[13191] | 321 | |
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[9322] | 322 | IF ( ln_schltotinc ) THEN |
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| 323 | ALLOCATE( schltot_bkginc(jpi,jpj) ) |
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| 324 | CALL asm_bgc_read_incs_2d( knum, 'bckinschltot', schltot_bkginc ) |
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| 325 | ENDIF |
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[13191] | 326 | |
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[9322] | 327 | IF ( ln_slphytotinc ) THEN |
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| 328 | ALLOCATE( slphytot_bkginc(jpi,jpj) ) |
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| 329 | CALL asm_bgc_read_incs_2d( knum, 'bckinslphytot', slphytot_bkginc ) |
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| 330 | ENDIF |
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[13191] | 331 | |
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[9322] | 332 | IF ( ln_slphydiainc ) THEN |
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| 333 | ALLOCATE( slphydia_bkginc(jpi,jpj) ) |
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| 334 | CALL asm_bgc_read_incs_2d( knum, 'bckinslphydia', slphydia_bkginc ) |
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| 335 | ENDIF |
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[13191] | 336 | |
---|
[9322] | 337 | IF ( ln_slphynoninc ) THEN |
---|
| 338 | ALLOCATE( slphynon_bkginc(jpi,jpj) ) |
---|
| 339 | CALL asm_bgc_read_incs_2d( knum, 'bckinslphynon', slphynon_bkginc ) |
---|
| 340 | ENDIF |
---|
| 341 | |
---|
| 342 | IF ( ln_sfco2inc ) THEN |
---|
| 343 | ALLOCATE( sfco2_bkginc(jpi,jpj) ) |
---|
| 344 | CALL asm_bgc_read_incs_2d( knum, 'bckinsfco2', sfco2_bkginc ) |
---|
| 345 | ENDIF |
---|
| 346 | |
---|
| 347 | IF ( ln_spco2inc ) THEN |
---|
| 348 | ALLOCATE( spco2_bkginc(jpi,jpj) ) |
---|
| 349 | CALL asm_bgc_read_incs_2d( knum, 'bckinspco2', sfco2_bkginc ) |
---|
| 350 | ENDIF |
---|
[13191] | 351 | |
---|
[9322] | 352 | IF ( ln_plchltotinc ) THEN |
---|
| 353 | ALLOCATE( plchltot_bkginc(jpi,jpj,jpk) ) |
---|
| 354 | CALL asm_bgc_read_incs_3d( knum, 'bckinplchltot', plchltot_bkginc ) |
---|
| 355 | ENDIF |
---|
[13191] | 356 | |
---|
[9322] | 357 | IF ( ln_pchltotinc ) THEN |
---|
| 358 | ALLOCATE( pchltot_bkginc(jpi,jpj,jpk) ) |
---|
| 359 | CALL asm_bgc_read_incs_3d( knum, 'bckinpchltot', pchltot_bkginc ) |
---|
| 360 | ENDIF |
---|
[13191] | 361 | |
---|
[9322] | 362 | IF ( ln_pno3inc ) THEN |
---|
| 363 | ALLOCATE( pno3_bkginc(jpi,jpj,jpk) ) |
---|
| 364 | CALL asm_bgc_read_incs_3d( knum, 'bckinpno3', pno3_bkginc ) |
---|
| 365 | ENDIF |
---|
[13191] | 366 | |
---|
[9322] | 367 | IF ( ln_psi4inc ) THEN |
---|
| 368 | ALLOCATE( psi4_bkginc(jpi,jpj,jpk) ) |
---|
| 369 | CALL asm_bgc_read_incs_3d( knum, 'bckinpsi4', psi4_bkginc ) |
---|
| 370 | ENDIF |
---|
[13191] | 371 | |
---|
[9322] | 372 | IF ( ln_pdicinc ) THEN |
---|
| 373 | ALLOCATE( pdic_bkginc(jpi,jpj,jpk) ) |
---|
| 374 | CALL asm_bgc_read_incs_3d( knum, 'bckinpdic', pdic_bkginc ) |
---|
| 375 | ENDIF |
---|
[13191] | 376 | |
---|
[9322] | 377 | IF ( ln_palkinc ) THEN |
---|
| 378 | ALLOCATE( palk_bkginc(jpi,jpj,jpk) ) |
---|
| 379 | CALL asm_bgc_read_incs_3d( knum, 'bckinpalk', palk_bkginc ) |
---|
| 380 | ENDIF |
---|
[13191] | 381 | |
---|
[9322] | 382 | IF ( ln_pphinc ) THEN |
---|
| 383 | ALLOCATE( pph_bkginc(jpi,jpj,jpk) ) |
---|
| 384 | CALL asm_bgc_read_incs_3d( knum, 'bckinpph', pph_bkginc ) |
---|
| 385 | ENDIF |
---|
[13191] | 386 | |
---|
[9322] | 387 | IF ( ln_po2inc ) THEN |
---|
| 388 | ALLOCATE( po2_bkginc(jpi,jpj,jpk) ) |
---|
| 389 | CALL asm_bgc_read_incs_3d( knum, 'bckinpo2', po2_bkginc ) |
---|
| 390 | ENDIF |
---|
| 391 | |
---|
| 392 | ! Allocate balancing increments |
---|
[13191] | 393 | |
---|
[9322] | 394 | IF ( ln_slchltotinc .OR. ln_slchldiainc .OR. ln_slchlnoninc .OR. & |
---|
| 395 | & ln_schltotinc .OR. ln_slphytotinc .OR. ln_slphydiainc .OR. & |
---|
| 396 | & ln_slphynoninc ) THEN |
---|
[9296] | 397 | #if defined key_top |
---|
[9326] | 398 | ALLOCATE( phyto2d_balinc(jpi,jpj,jpk,jptra) ) |
---|
| 399 | phyto2d_balinc(:,:,:,:) = 0.0 |
---|
[9322] | 400 | #else |
---|
| 401 | CALL ctl_stop( ' key_top must be set for balancing increments' ) |
---|
[9296] | 402 | #endif |
---|
| 403 | ENDIF |
---|
[13191] | 404 | |
---|
[9326] | 405 | IF ( ln_plchltotinc .OR. ln_pchltotinc ) THEN |
---|
| 406 | #if defined key_top |
---|
| 407 | ALLOCATE( phyto3d_balinc(jpi,jpj,jpk,jptra) ) |
---|
| 408 | phyto3d_balinc(:,:,:,:) = 0.0 |
---|
| 409 | #else |
---|
| 410 | CALL ctl_stop( ' key_top must be set for balancing increments' ) |
---|
| 411 | #endif |
---|
| 412 | ENDIF |
---|
[9322] | 413 | |
---|
[9296] | 414 | IF ( ln_spco2inc .OR. ln_sfco2inc ) THEN |
---|
| 415 | #if defined key_top |
---|
[9322] | 416 | ALLOCATE( pco2_balinc(jpi,jpj,jpk,jptra) ) |
---|
| 417 | pco2_balinc(:,:,:,:) = 0.0 |
---|
| 418 | #else |
---|
| 419 | CALL ctl_stop( ' key_top must be set for balancing increments' ) |
---|
[9296] | 420 | #endif |
---|
| 421 | ENDIF |
---|
| 422 | |
---|
[9322] | 423 | IF ( ln_pphinc ) THEN |
---|
| 424 | #if defined key_top |
---|
| 425 | ALLOCATE( ph_balinc(jpi,jpj,jpk,jptra) ) |
---|
| 426 | ph_balinc(:,:,:,:) = 0.0 |
---|
| 427 | #else |
---|
| 428 | CALL ctl_stop( ' key_top must be set for balancing increments' ) |
---|
| 429 | #endif |
---|
[9296] | 430 | ENDIF |
---|
| 431 | |
---|
| 432 | END SUBROUTINE asm_bgc_init_incs |
---|
| 433 | |
---|
[9297] | 434 | !!=========================================================================== |
---|
| 435 | !!=========================================================================== |
---|
| 436 | !!=========================================================================== |
---|
[9296] | 437 | |
---|
[9322] | 438 | SUBROUTINE asm_bgc_read_incs_2d( knum, cd_bgcname, p_incs ) |
---|
| 439 | !!------------------------------------------------------------------------ |
---|
| 440 | !! *** ROUTINE asm_bgc_init_incs *** |
---|
| 441 | !! |
---|
| 442 | !! ** Purpose : read 2d bgc increments |
---|
| 443 | !! |
---|
| 444 | !! ** Method : read increments from file |
---|
| 445 | !! |
---|
| 446 | !! ** Action : read increments from file |
---|
| 447 | !! |
---|
| 448 | !! References : asm_inc_init |
---|
| 449 | !!------------------------------------------------------------------------ |
---|
| 450 | !! |
---|
| 451 | INTEGER, INTENT(in ) :: knum ! i/o unit |
---|
| 452 | CHARACTER(LEN=13), INTENT(in ) :: cd_bgcname ! variable |
---|
| 453 | REAL(wp), DIMENSION(jpi,jpj), INTENT( out) :: p_incs ! increments |
---|
| 454 | !! |
---|
| 455 | !!------------------------------------------------------------------------ |
---|
| 456 | |
---|
| 457 | ! Initialise |
---|
| 458 | p_incs(:,:) = 0.0 |
---|
[13191] | 459 | |
---|
[9322] | 460 | ! read from file |
---|
| 461 | CALL iom_get( knum, jpdom_autoglo, TRIM(cd_bgcname), p_incs(:,:), 1 ) |
---|
[13191] | 462 | |
---|
[9322] | 463 | ! Apply the masks |
---|
| 464 | p_incs(:,:) = p_incs(:,:) * tmask(:,:,1) |
---|
[13191] | 465 | |
---|
[9322] | 466 | ! Set missing increments to 0.0 rather than 1e+20 |
---|
| 467 | ! to allow for differences in masks |
---|
| 468 | WHERE( ABS( p_incs(:,:) ) > 1.0e+10 ) p_incs(:,:) = 0.0 |
---|
| 469 | |
---|
| 470 | END SUBROUTINE asm_bgc_read_incs_2d |
---|
| 471 | |
---|
| 472 | !!=========================================================================== |
---|
| 473 | !!=========================================================================== |
---|
| 474 | !!=========================================================================== |
---|
| 475 | |
---|
| 476 | SUBROUTINE asm_bgc_read_incs_3d( knum, cd_bgcname, p_incs ) |
---|
| 477 | !!------------------------------------------------------------------------ |
---|
| 478 | !! *** ROUTINE asm_bgc_init_incs *** |
---|
| 479 | !! |
---|
| 480 | !! ** Purpose : read 3d bgc increments |
---|
| 481 | !! |
---|
| 482 | !! ** Method : read increments from file |
---|
| 483 | !! |
---|
| 484 | !! ** Action : read increments from file |
---|
| 485 | !! |
---|
| 486 | !! References : asm_inc_init |
---|
| 487 | !!------------------------------------------------------------------------ |
---|
| 488 | !! |
---|
| 489 | INTEGER, INTENT(in ) :: knum ! i/o unit |
---|
| 490 | CHARACTER(LEN=13), INTENT(in ) :: cd_bgcname ! variable |
---|
| 491 | REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT( out) :: p_incs ! increments |
---|
| 492 | !! |
---|
| 493 | !!------------------------------------------------------------------------ |
---|
| 494 | |
---|
| 495 | ! Initialise |
---|
| 496 | p_incs(:,:,:) = 0.0 |
---|
[13191] | 497 | |
---|
[9322] | 498 | ! read from file |
---|
| 499 | CALL iom_get( knum, jpdom_autoglo, TRIM(cd_bgcname), p_incs(:,:,:), 1 ) |
---|
[13191] | 500 | |
---|
[9322] | 501 | ! Apply the masks |
---|
| 502 | p_incs(:,:,:) = p_incs(:,:,:) * tmask(:,:,:) |
---|
[13191] | 503 | |
---|
[9322] | 504 | ! Set missing increments to 0.0 rather than 1e+20 |
---|
| 505 | ! to allow for differences in masks |
---|
| 506 | WHERE( ABS( p_incs(:,:,:) ) > 1.0e+10 ) p_incs(:,:,:) = 0.0 |
---|
| 507 | |
---|
| 508 | END SUBROUTINE asm_bgc_read_incs_3d |
---|
| 509 | |
---|
| 510 | !!=========================================================================== |
---|
| 511 | !!=========================================================================== |
---|
| 512 | !!=========================================================================== |
---|
| 513 | |
---|
[9296] | 514 | SUBROUTINE asm_bgc_init_bkg |
---|
[9297] | 515 | !!------------------------------------------------------------------------ |
---|
[9296] | 516 | !! *** ROUTINE asm_bgc_init_bkg *** |
---|
| 517 | !! |
---|
| 518 | !! ** Purpose : initialise bgc background |
---|
| 519 | !! |
---|
| 520 | !! ** Method : allocate arrays and read background from file |
---|
| 521 | !! |
---|
| 522 | !! ** Action : allocate arrays and read background from file |
---|
| 523 | !! |
---|
| 524 | !! References : asm_inc_init |
---|
[9297] | 525 | !!------------------------------------------------------------------------ |
---|
[9296] | 526 | !! |
---|
| 527 | INTEGER :: inum ! i/o unit of background file |
---|
| 528 | INTEGER :: jt ! loop counter |
---|
| 529 | !! |
---|
[9297] | 530 | !!------------------------------------------------------------------------ |
---|
[9296] | 531 | |
---|
[10141] | 532 | #if defined key_top && ( defined key_hadocc || defined key_medusa ) |
---|
[9322] | 533 | IF ( ln_slchltotinc .OR. ln_slchldiainc .OR. ln_slchlnoninc .OR. & |
---|
| 534 | & ln_schltotinc .OR. ln_slphytotinc .OR. ln_slphydiainc .OR. & |
---|
| 535 | & ln_slphynoninc .OR. ln_plchltotinc .OR. ln_pchltotinc ) THEN |
---|
[9296] | 536 | |
---|
| 537 | ALLOCATE( pgrow_avg_bkg(jpi,jpj) ) |
---|
| 538 | ALLOCATE( ploss_avg_bkg(jpi,jpj) ) |
---|
| 539 | ALLOCATE( phyt_avg_bkg(jpi,jpj) ) |
---|
[13354] | 540 | ALLOCATE( pgrow_avg_3d_bkg(jpi,jpj,jpk) ) |
---|
| 541 | ALLOCATE( ploss_avg_3d_bkg(jpi,jpj,jpk) ) |
---|
| 542 | ALLOCATE( phyt_avg_3d_bkg(jpi,jpj,jpk) ) |
---|
[9296] | 543 | ALLOCATE( mld_max_bkg(jpi,jpj) ) |
---|
| 544 | ALLOCATE( tracer_bkg(jpi,jpj,jpk,jptra) ) |
---|
| 545 | pgrow_avg_bkg(:,:) = 0.0 |
---|
| 546 | ploss_avg_bkg(:,:) = 0.0 |
---|
| 547 | phyt_avg_bkg(:,:) = 0.0 |
---|
[13354] | 548 | pgrow_avg_3d_bkg(:,:,:) = 0.0 |
---|
| 549 | ploss_avg_3d_bkg(:,:,:) = 0.0 |
---|
| 550 | phyt_avg_3d_bkg(:,:,:) = 0.0 |
---|
[9296] | 551 | mld_max_bkg(:,:) = 0.0 |
---|
| 552 | tracer_bkg(:,:,:,:) = 0.0 |
---|
| 553 | |
---|
| 554 | #if defined key_hadocc |
---|
[9322] | 555 | ALLOCATE( chl_bkg(jpi,jpj,jpk) ) |
---|
| 556 | ALLOCATE( cchl_p_bkg(jpi,jpj,jpk) ) |
---|
| 557 | chl_bkg(:,:,:) = 0.0 |
---|
| 558 | cchl_p_bkg(:,:,:) = 0.0 |
---|
[9296] | 559 | #endif |
---|
[13191] | 560 | |
---|
[9296] | 561 | !-------------------------------------------------------------------- |
---|
[9322] | 562 | ! Read background variables for phytoplankton assimilation |
---|
[9296] | 563 | ! Some only required if performing balancing |
---|
| 564 | !-------------------------------------------------------------------- |
---|
| 565 | |
---|
| 566 | CALL iom_open( c_asmbkg, inum ) |
---|
| 567 | |
---|
| 568 | #if defined key_hadocc |
---|
| 569 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_chl', chl_bkg ) |
---|
| 570 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_cchl', cchl_p_bkg ) |
---|
[9322] | 571 | chl_bkg(:,:,:) = chl_bkg(:,:,:) * tmask(:,:,:) |
---|
| 572 | cchl_p_bkg(:,:,:) = cchl_p_bkg(:,:,:) * tmask(:,:,:) |
---|
[10141] | 573 | #elif defined key_medusa |
---|
[9296] | 574 | CALL iom_get( inum, jpdom_autoglo, 'medusa_chn', tracer_bkg(:,:,:,jpchn) ) |
---|
| 575 | CALL iom_get( inum, jpdom_autoglo, 'medusa_chd', tracer_bkg(:,:,:,jpchd) ) |
---|
[9861] | 576 | CALL iom_get( inum, jpdom_autoglo, 'medusa_phn', tracer_bkg(:,:,:,jpphn) ) |
---|
| 577 | CALL iom_get( inum, jpdom_autoglo, 'medusa_phd', tracer_bkg(:,:,:,jpphd) ) |
---|
| 578 | CALL iom_get( inum, jpdom_autoglo, 'medusa_pds', tracer_bkg(:,:,:,jppds) ) |
---|
[9296] | 579 | #endif |
---|
[13191] | 580 | |
---|
[9322] | 581 | IF ( ln_phytobal ) THEN |
---|
[9296] | 582 | |
---|
| 583 | CALL iom_get( inum, jpdom_autoglo, 'pgrow_avg', pgrow_avg_bkg ) |
---|
| 584 | CALL iom_get( inum, jpdom_autoglo, 'ploss_avg', ploss_avg_bkg ) |
---|
| 585 | CALL iom_get( inum, jpdom_autoglo, 'phyt_avg', phyt_avg_bkg ) |
---|
[13354] | 586 | CALL iom_get( inum, jpdom_autoglo, 'pgrow_avg_3d', pgrow_avg_3d_bkg ) |
---|
| 587 | CALL iom_get( inum, jpdom_autoglo, 'ploss_avg_3d', ploss_avg_3d_bkg ) |
---|
| 588 | CALL iom_get( inum, jpdom_autoglo, 'phyt_avg_3d', phyt_avg_3d_bkg ) |
---|
[9296] | 589 | CALL iom_get( inum, jpdom_autoglo, 'mld_max', mld_max_bkg ) |
---|
| 590 | pgrow_avg_bkg(:,:) = pgrow_avg_bkg(:,:) * tmask(:,:,1) |
---|
| 591 | ploss_avg_bkg(:,:) = ploss_avg_bkg(:,:) * tmask(:,:,1) |
---|
| 592 | phyt_avg_bkg(:,:) = phyt_avg_bkg(:,:) * tmask(:,:,1) |
---|
[13354] | 593 | pgrow_avg_3d_bkg(:,:,:) = pgrow_avg_3d_bkg(:,:,:) * tmask(:,:,:) |
---|
| 594 | ploss_avg_3d_bkg(:,:,:) = ploss_avg_3d_bkg(:,:,:) * tmask(:,:,:) |
---|
| 595 | phyt_avg_3d_bkg(:,:,:) = phyt_avg_3d_bkg(:,:,:) * tmask(:,:,:) |
---|
[9296] | 596 | mld_max_bkg(:,:) = mld_max_bkg(:,:) * tmask(:,:,1) |
---|
| 597 | |
---|
| 598 | #if defined key_hadocc |
---|
| 599 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_nut', tracer_bkg(:,:,:,jp_had_nut) ) |
---|
| 600 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_phy', tracer_bkg(:,:,:,jp_had_phy) ) |
---|
| 601 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_zoo', tracer_bkg(:,:,:,jp_had_zoo) ) |
---|
| 602 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_pdn', tracer_bkg(:,:,:,jp_had_pdn) ) |
---|
| 603 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_dic', tracer_bkg(:,:,:,jp_had_dic) ) |
---|
| 604 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_alk', tracer_bkg(:,:,:,jp_had_alk) ) |
---|
[10141] | 605 | #elif defined key_medusa |
---|
[9296] | 606 | CALL iom_get( inum, jpdom_autoglo, 'medusa_zmi', tracer_bkg(:,:,:,jpzmi) ) |
---|
| 607 | CALL iom_get( inum, jpdom_autoglo, 'medusa_zme', tracer_bkg(:,:,:,jpzme) ) |
---|
| 608 | CALL iom_get( inum, jpdom_autoglo, 'medusa_din', tracer_bkg(:,:,:,jpdin) ) |
---|
| 609 | CALL iom_get( inum, jpdom_autoglo, 'medusa_sil', tracer_bkg(:,:,:,jpsil) ) |
---|
| 610 | CALL iom_get( inum, jpdom_autoglo, 'medusa_fer', tracer_bkg(:,:,:,jpfer) ) |
---|
| 611 | CALL iom_get( inum, jpdom_autoglo, 'medusa_det', tracer_bkg(:,:,:,jpdet) ) |
---|
| 612 | CALL iom_get( inum, jpdom_autoglo, 'medusa_dtc', tracer_bkg(:,:,:,jpdtc) ) |
---|
| 613 | CALL iom_get( inum, jpdom_autoglo, 'medusa_dic', tracer_bkg(:,:,:,jpdic) ) |
---|
| 614 | CALL iom_get( inum, jpdom_autoglo, 'medusa_alk', tracer_bkg(:,:,:,jpalk) ) |
---|
| 615 | CALL iom_get( inum, jpdom_autoglo, 'medusa_oxy', tracer_bkg(:,:,:,jpoxy) ) |
---|
| 616 | #endif |
---|
[9862] | 617 | ELSE IF ( ln_spco2inc .OR. ln_sfco2inc .OR. ln_pphinc ) THEN |
---|
[9296] | 618 | #if defined key_hadocc |
---|
| 619 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_dic', tracer_bkg(:,:,:,jp_had_dic) ) |
---|
| 620 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_alk', tracer_bkg(:,:,:,jp_had_alk) ) |
---|
[10141] | 621 | #elif defined key_medusa |
---|
[9296] | 622 | CALL iom_get( inum, jpdom_autoglo, 'medusa_dic', tracer_bkg(:,:,:,jpdic) ) |
---|
| 623 | CALL iom_get( inum, jpdom_autoglo, 'medusa_alk', tracer_bkg(:,:,:,jpalk) ) |
---|
| 624 | #endif |
---|
| 625 | CALL iom_get( inum, jpdom_autoglo, 'mld_max', mld_max_bkg ) |
---|
| 626 | mld_max_bkg(:,:) = mld_max_bkg(:,:) * tmask(:,:,1) |
---|
| 627 | ENDIF |
---|
| 628 | |
---|
| 629 | CALL iom_close( inum ) |
---|
[13191] | 630 | |
---|
[9296] | 631 | DO jt = 1, jptra |
---|
| 632 | tracer_bkg(:,:,:,jt) = tracer_bkg(:,:,:,jt) * tmask(:,:,:) |
---|
| 633 | END DO |
---|
[13191] | 634 | |
---|
[9322] | 635 | ELSE IF ( ln_spco2inc .OR. ln_sfco2inc .OR. ln_pphinc ) THEN |
---|
[9296] | 636 | |
---|
| 637 | ALLOCATE( tracer_bkg(jpi,jpj,jpk,jptra) ) |
---|
| 638 | ALLOCATE( mld_max_bkg(jpi,jpj) ) |
---|
| 639 | tracer_bkg(:,:,:,:) = 0.0 |
---|
| 640 | mld_max_bkg(:,:) = 0.0 |
---|
| 641 | |
---|
| 642 | CALL iom_open( c_asmbkg, inum ) |
---|
[13191] | 643 | |
---|
[9296] | 644 | #if defined key_hadocc |
---|
| 645 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_dic', tracer_bkg(:,:,:,jp_had_dic) ) |
---|
| 646 | CALL iom_get( inum, jpdom_autoglo, 'hadocc_alk', tracer_bkg(:,:,:,jp_had_alk) ) |
---|
[10141] | 647 | #elif defined key_medusa |
---|
[9296] | 648 | CALL iom_get( inum, jpdom_autoglo, 'medusa_dic', tracer_bkg(:,:,:,jpdic) ) |
---|
| 649 | CALL iom_get( inum, jpdom_autoglo, 'medusa_alk', tracer_bkg(:,:,:,jpalk) ) |
---|
| 650 | #endif |
---|
| 651 | CALL iom_get( inum, jpdom_autoglo, 'mld_max', mld_max_bkg ) |
---|
| 652 | |
---|
| 653 | CALL iom_close( inum ) |
---|
[13191] | 654 | |
---|
[9296] | 655 | DO jt = 1, jptra |
---|
| 656 | tracer_bkg(:,:,:,jt) = tracer_bkg(:,:,:,jt) * tmask(:,:,:) |
---|
| 657 | END DO |
---|
| 658 | mld_max_bkg(:,:) = mld_max_bkg(:,:) * tmask(:,:,1) |
---|
[13191] | 659 | |
---|
[9296] | 660 | ENDIF |
---|
[9322] | 661 | #else |
---|
| 662 | CALL ctl_stop( ' asm_bgc_init_bkg: key_top and a compatible biogeochemical model required' ) |
---|
[9296] | 663 | #endif |
---|
| 664 | |
---|
| 665 | END SUBROUTINE asm_bgc_init_bkg |
---|
| 666 | |
---|
[9297] | 667 | !!=========================================================================== |
---|
| 668 | !!=========================================================================== |
---|
| 669 | !!=========================================================================== |
---|
[9296] | 670 | |
---|
| 671 | SUBROUTINE asm_bgc_bal_wri( kt ) |
---|
[9297] | 672 | !!------------------------------------------------------------------------ |
---|
[9296] | 673 | !! |
---|
| 674 | !! *** ROUTINE asm_bgc_bal_wri *** |
---|
| 675 | !! |
---|
| 676 | !! ** Purpose : Write to file the balancing increments |
---|
| 677 | !! calculated for biogeochemistry |
---|
| 678 | !! |
---|
| 679 | !! ** Method : Write to file the balancing increments |
---|
| 680 | !! calculated for biogeochemistry |
---|
| 681 | !! |
---|
| 682 | !! ** Action : |
---|
[13191] | 683 | !! |
---|
[9296] | 684 | !! References : |
---|
| 685 | !! |
---|
| 686 | !! History : |
---|
| 687 | !! ! 2014-08 (D. Ford) Initial version, based on asm_bkg_wri |
---|
[9297] | 688 | !!------------------------------------------------------------------------ |
---|
[9296] | 689 | !! * Arguments |
---|
| 690 | INTEGER, INTENT( IN ) :: kt ! Current time-step |
---|
| 691 | !! * Local declarations |
---|
| 692 | CHARACTER(LEN=50) :: cl_asmbal ! Filename (with extension) |
---|
| 693 | LOGICAL :: llok ! Check if file exists |
---|
| 694 | INTEGER :: inum ! File unit number |
---|
| 695 | REAL(wp) :: zdate ! Date |
---|
[9297] | 696 | !!------------------------------------------------------------------------ |
---|
[13191] | 697 | |
---|
[9296] | 698 | ! Set things up |
---|
| 699 | zdate = REAL( ndastp ) |
---|
| 700 | WRITE(cl_asmbal, FMT='(A,".nc")' ) TRIM( c_asmbal ) |
---|
| 701 | |
---|
| 702 | ! Check if file exists |
---|
| 703 | INQUIRE( FILE = TRIM( cl_asmbal ), EXIST = llok ) |
---|
| 704 | IF( .NOT. llok ) THEN |
---|
| 705 | IF(lwp) WRITE(numout,*) ' Setting up assimilation balancing increments file '// & |
---|
| 706 | & TRIM( c_asmbal ) // ' at timestep = ', kt |
---|
| 707 | |
---|
[13191] | 708 | ! Define the output file |
---|
[9296] | 709 | CALL iom_open( c_asmbal, inum, ldwrt = .TRUE., kiolib = jprstlib) |
---|
| 710 | |
---|
| 711 | ! Write the information |
---|
| 712 | CALL iom_rstput( kt, kt, inum, 'rdastp' , zdate ) |
---|
| 713 | |
---|
[9381] | 714 | IF ( ln_slchltotinc .OR. ln_slchldiainc .OR. ln_slchlnoninc .OR. & |
---|
| 715 | & ln_schltotinc .OR. ln_slphytotinc .OR. ln_slphydiainc .OR. & |
---|
| 716 | & ln_slphynoninc ) THEN |
---|
[10141] | 717 | #if defined key_medusa |
---|
[9381] | 718 | CALL iom_rstput( kt, kt, inum, 'phy2d_chn', phyto2d_balinc(:,:,:,jpchn) ) |
---|
| 719 | CALL iom_rstput( kt, kt, inum, 'phy2d_chd', phyto2d_balinc(:,:,:,jpchd) ) |
---|
| 720 | CALL iom_rstput( kt, kt, inum, 'phy2d_phn', phyto2d_balinc(:,:,:,jpphn) ) |
---|
| 721 | CALL iom_rstput( kt, kt, inum, 'phy2d_phd', phyto2d_balinc(:,:,:,jpphd) ) |
---|
| 722 | CALL iom_rstput( kt, kt, inum, 'phy2d_pds', phyto2d_balinc(:,:,:,jppds) ) |
---|
[9322] | 723 | IF ( ln_phytobal ) THEN |
---|
[9381] | 724 | CALL iom_rstput( kt, kt, inum, 'phy2d_zmi', phyto2d_balinc(:,:,:,jpzmi) ) |
---|
| 725 | CALL iom_rstput( kt, kt, inum, 'phy2d_zme', phyto2d_balinc(:,:,:,jpzme) ) |
---|
| 726 | CALL iom_rstput( kt, kt, inum, 'phy2d_din', phyto2d_balinc(:,:,:,jpdin) ) |
---|
| 727 | CALL iom_rstput( kt, kt, inum, 'phy2d_sil', phyto2d_balinc(:,:,:,jpsil) ) |
---|
| 728 | CALL iom_rstput( kt, kt, inum, 'phy2d_fer', phyto2d_balinc(:,:,:,jpfer) ) |
---|
| 729 | CALL iom_rstput( kt, kt, inum, 'phy2d_det', phyto2d_balinc(:,:,:,jpdet) ) |
---|
| 730 | CALL iom_rstput( kt, kt, inum, 'phy2d_dtc', phyto2d_balinc(:,:,:,jpdtc) ) |
---|
| 731 | CALL iom_rstput( kt, kt, inum, 'phy2d_dic', phyto2d_balinc(:,:,:,jpdic) ) |
---|
| 732 | CALL iom_rstput( kt, kt, inum, 'phy2d_alk', phyto2d_balinc(:,:,:,jpalk) ) |
---|
| 733 | CALL iom_rstput( kt, kt, inum, 'phy2d_oxy', phyto2d_balinc(:,:,:,jpoxy) ) |
---|
[9296] | 734 | ENDIF |
---|
| 735 | #elif defined key_hadocc |
---|
[9381] | 736 | CALL iom_rstput( kt, kt, inum, 'phy2d_phy', phyto2d_balinc(:,:,:,jp_had_phy) ) |
---|
[9322] | 737 | IF ( ln_phytobal ) THEN |
---|
[9381] | 738 | CALL iom_rstput( kt, kt, inum, 'phy2d_nut', phyto2d_balinc(:,:,:,jp_had_nut) ) |
---|
| 739 | CALL iom_rstput( kt, kt, inum, 'phy2d_zoo', phyto2d_balinc(:,:,:,jp_had_zoo) ) |
---|
| 740 | CALL iom_rstput( kt, kt, inum, 'phy2d_det', phyto2d_balinc(:,:,:,jp_had_pdn) ) |
---|
| 741 | CALL iom_rstput( kt, kt, inum, 'phy2d_dic', phyto2d_balinc(:,:,:,jp_had_dic) ) |
---|
| 742 | CALL iom_rstput( kt, kt, inum, 'phy2d_alk', phyto2d_balinc(:,:,:,jp_had_alk) ) |
---|
[9296] | 743 | ENDIF |
---|
| 744 | #endif |
---|
| 745 | ENDIF |
---|
| 746 | |
---|
[9381] | 747 | IF ( ln_plchltotinc .OR. ln_pchltotinc ) THEN |
---|
[10141] | 748 | #if defined key_medusa |
---|
[9381] | 749 | CALL iom_rstput( kt, kt, inum, 'phy3d_chn', phyto3d_balinc(:,:,:,jpchn) ) |
---|
| 750 | CALL iom_rstput( kt, kt, inum, 'phy3d_chd', phyto3d_balinc(:,:,:,jpchd) ) |
---|
| 751 | CALL iom_rstput( kt, kt, inum, 'phy3d_phn', phyto3d_balinc(:,:,:,jpphn) ) |
---|
| 752 | CALL iom_rstput( kt, kt, inum, 'phy3d_phd', phyto3d_balinc(:,:,:,jpphd) ) |
---|
| 753 | CALL iom_rstput( kt, kt, inum, 'phy3d_pds', phyto3d_balinc(:,:,:,jppds) ) |
---|
[13354] | 754 | IF ( ln_phytobal ) THEN |
---|
| 755 | CALL iom_rstput( kt, kt, inum, 'phy3d_zmi', phyto3d_balinc(:,:,:,jpzmi) ) |
---|
| 756 | CALL iom_rstput( kt, kt, inum, 'phy3d_zme', phyto3d_balinc(:,:,:,jpzme) ) |
---|
| 757 | CALL iom_rstput( kt, kt, inum, 'phy3d_din', phyto3d_balinc(:,:,:,jpdin) ) |
---|
| 758 | CALL iom_rstput( kt, kt, inum, 'phy3d_sil', phyto3d_balinc(:,:,:,jpsil) ) |
---|
| 759 | CALL iom_rstput( kt, kt, inum, 'phy3d_fer', phyto3d_balinc(:,:,:,jpfer) ) |
---|
| 760 | CALL iom_rstput( kt, kt, inum, 'phy3d_det', phyto3d_balinc(:,:,:,jpdet) ) |
---|
| 761 | CALL iom_rstput( kt, kt, inum, 'phy3d_dtc', phyto3d_balinc(:,:,:,jpdtc) ) |
---|
| 762 | CALL iom_rstput( kt, kt, inum, 'phy3d_dic', phyto3d_balinc(:,:,:,jpdic) ) |
---|
| 763 | CALL iom_rstput( kt, kt, inum, 'phy3d_alk', phyto3d_balinc(:,:,:,jpalk) ) |
---|
| 764 | CALL iom_rstput( kt, kt, inum, 'phy3d_oxy', phyto3d_balinc(:,:,:,jpoxy) ) |
---|
| 765 | ENDIF |
---|
[9381] | 766 | #elif defined key_hadocc |
---|
| 767 | CALL iom_rstput( kt, kt, inum, 'phy3d_phy', phyto3d_balinc(:,:,:,jp_had_phy) ) |
---|
[13354] | 768 | IF ( ln_phytobal ) THEN |
---|
| 769 | CALL iom_rstput( kt, kt, inum, 'phy3d_nut', phyto3d_balinc(:,:,:,jp_had_nut) ) |
---|
| 770 | CALL iom_rstput( kt, kt, inum, 'phy3d_zoo', phyto3d_balinc(:,:,:,jp_had_zoo) ) |
---|
| 771 | CALL iom_rstput( kt, kt, inum, 'phy3d_det', phyto3d_balinc(:,:,:,jp_had_pdn) ) |
---|
| 772 | CALL iom_rstput( kt, kt, inum, 'phy3d_dic', phyto3d_balinc(:,:,:,jp_had_dic) ) |
---|
| 773 | CALL iom_rstput( kt, kt, inum, 'phy3d_alk', phyto3d_balinc(:,:,:,jp_had_alk) ) |
---|
| 774 | ENDIF |
---|
[9381] | 775 | #endif |
---|
| 776 | ENDIF |
---|
| 777 | |
---|
[9296] | 778 | IF ( ln_spco2inc ) THEN |
---|
[10141] | 779 | #if defined key_medusa |
---|
[9381] | 780 | CALL iom_rstput( kt, kt, inum, 'pco2_dic', pco2_balinc(:,:,:,jpdic) ) |
---|
| 781 | CALL iom_rstput( kt, kt, inum, 'pco2_alk', pco2_balinc(:,:,:,jpalk) ) |
---|
[9296] | 782 | #elif defined key_hadocc |
---|
[9381] | 783 | CALL iom_rstput( kt, kt, inum, 'pco2_dic', pco2_balinc(:,:,:,jp_had_dic) ) |
---|
| 784 | CALL iom_rstput( kt, kt, inum, 'pco2_alk', pco2_balinc(:,:,:,jp_had_alk) ) |
---|
[9296] | 785 | #endif |
---|
| 786 | ELSE IF ( ln_sfco2inc ) THEN |
---|
[10141] | 787 | #if defined key_medusa |
---|
[9381] | 788 | CALL iom_rstput( kt, kt, inum, 'fco2_dic', pco2_balinc(:,:,:,jpdic) ) |
---|
| 789 | CALL iom_rstput( kt, kt, inum, 'fco2_alk', pco2_balinc(:,:,:,jpalk) ) |
---|
[9296] | 790 | #elif defined key_hadocc |
---|
[9381] | 791 | CALL iom_rstput( kt, kt, inum, 'fco2_dic', pco2_balinc(:,:,:,jp_had_dic) ) |
---|
| 792 | CALL iom_rstput( kt, kt, inum, 'fco2_alk', pco2_balinc(:,:,:,jp_had_alk) ) |
---|
[9296] | 793 | #endif |
---|
| 794 | ENDIF |
---|
| 795 | |
---|
[9381] | 796 | IF ( ln_pphinc ) THEN |
---|
[10141] | 797 | #if defined key_medusa |
---|
[9381] | 798 | CALL iom_rstput( kt, kt, inum, 'ph_dic', ph_balinc(:,:,:,jpdic) ) |
---|
| 799 | CALL iom_rstput( kt, kt, inum, 'ph_alk', ph_balinc(:,:,:,jpalk) ) |
---|
| 800 | #elif defined key_hadocc |
---|
| 801 | CALL iom_rstput( kt, kt, inum, 'ph_dic', ph_balinc(:,:,:,jp_had_dic) ) |
---|
| 802 | CALL iom_rstput( kt, kt, inum, 'ph_alk', ph_balinc(:,:,:,jp_had_alk) ) |
---|
| 803 | #endif |
---|
| 804 | ENDIF |
---|
| 805 | |
---|
[9296] | 806 | CALL iom_close( inum ) |
---|
| 807 | ELSE |
---|
| 808 | CALL ctl_warn( TRIM( cl_asmbal ) // ' already exists ', & |
---|
| 809 | & ' Therefore not writing out balancing increments at this timestep', & |
---|
| 810 | & ' Something has probably gone wrong somewhere' ) |
---|
| 811 | IF(lwp) WRITE(numout,*) ' Failed to set up assimilation balancing increments file '// & |
---|
| 812 | & TRIM( c_asmbal ) // ' at timestep = ', kt |
---|
| 813 | ENDIF |
---|
[13191] | 814 | |
---|
[9296] | 815 | END SUBROUTINE asm_bgc_bal_wri |
---|
| 816 | |
---|
[9297] | 817 | !!=========================================================================== |
---|
| 818 | !!=========================================================================== |
---|
| 819 | !!=========================================================================== |
---|
[9296] | 820 | |
---|
| 821 | SUBROUTINE asm_bgc_bkg_wri( kt, knum ) |
---|
[9297] | 822 | !!------------------------------------------------------------------------ |
---|
[9296] | 823 | !! *** ROUTINE asm_bgc_bkg_wri *** |
---|
| 824 | !! |
---|
| 825 | !! ** Purpose : write out bgc background |
---|
| 826 | !! |
---|
| 827 | !! ** Method : write out bgc background |
---|
| 828 | !! |
---|
| 829 | !! ** Action : write out bgc background |
---|
| 830 | !! |
---|
| 831 | !! References : asm_bkg_wri |
---|
[9297] | 832 | !!------------------------------------------------------------------------ |
---|
[9296] | 833 | !! |
---|
| 834 | INTEGER, INTENT(in ) :: kt ! Current time-step |
---|
| 835 | INTEGER, INTENT(in ) :: knum ! i/o unit of increments file |
---|
| 836 | !! |
---|
[9297] | 837 | !!------------------------------------------------------------------------ |
---|
[9296] | 838 | |
---|
[13354] | 839 | #if defined key_hadocc || defined key_medusa |
---|
[9296] | 840 | CALL iom_rstput( kt, nitbkg_r, knum, 'pgrow_avg' , pgrow_avg ) |
---|
| 841 | CALL iom_rstput( kt, nitbkg_r, knum, 'ploss_avg' , ploss_avg ) |
---|
| 842 | CALL iom_rstput( kt, nitbkg_r, knum, 'phyt_avg' , phyt_avg ) |
---|
[13354] | 843 | CALL iom_rstput( kt, nitbkg_r, knum, 'pgrow_avg_3d', pgrow_avg_3d ) |
---|
| 844 | CALL iom_rstput( kt, nitbkg_r, knum, 'ploss_avg_3d', ploss_avg_3d ) |
---|
| 845 | CALL iom_rstput( kt, nitbkg_r, knum, 'phyt_avg_3d' , phyt_avg_3d ) |
---|
[9296] | 846 | CALL iom_rstput( kt, nitbkg_r, knum, 'mld_max' , mld_max ) |
---|
[13354] | 847 | #if defined key_hadocc |
---|
[9296] | 848 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_nut' , trn(:,:,:,jp_had_nut) ) |
---|
| 849 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_phy' , trn(:,:,:,jp_had_phy) ) |
---|
| 850 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_zoo' , trn(:,:,:,jp_had_zoo) ) |
---|
| 851 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_pdn' , trn(:,:,:,jp_had_pdn) ) |
---|
| 852 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_dic' , trn(:,:,:,jp_had_dic) ) |
---|
| 853 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_alk' , trn(:,:,:,jp_had_alk) ) |
---|
[9322] | 854 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_chl' , HADOCC_CHL(:,:,:) ) |
---|
| 855 | CALL iom_rstput( kt, nitbkg_r, knum, 'hadocc_cchl' , cchl_p(:,:,:) ) |
---|
[10141] | 856 | #elif defined key_medusa |
---|
[9296] | 857 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_chn' , trn(:,:,:,jpchn) ) |
---|
| 858 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_chd' , trn(:,:,:,jpchd) ) |
---|
| 859 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_phn' , trn(:,:,:,jpphn) ) |
---|
| 860 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_phd' , trn(:,:,:,jpphd) ) |
---|
| 861 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_pds' , trn(:,:,:,jppds) ) |
---|
| 862 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_zmi' , trn(:,:,:,jpzmi) ) |
---|
| 863 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_zme' , trn(:,:,:,jpzme) ) |
---|
| 864 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_din' , trn(:,:,:,jpdin) ) |
---|
| 865 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_sil' , trn(:,:,:,jpsil) ) |
---|
| 866 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_fer' , trn(:,:,:,jpfer) ) |
---|
| 867 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_det' , trn(:,:,:,jpdet) ) |
---|
| 868 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_dtc' , trn(:,:,:,jpdtc) ) |
---|
| 869 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_dic' , trn(:,:,:,jpdic) ) |
---|
| 870 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_alk' , trn(:,:,:,jpalk) ) |
---|
| 871 | CALL iom_rstput( kt, nitbkg_r, knum, 'medusa_oxy' , trn(:,:,:,jpoxy) ) |
---|
| 872 | #endif |
---|
[13354] | 873 | #endif |
---|
[9296] | 874 | |
---|
| 875 | END SUBROUTINE asm_bgc_bkg_wri |
---|
| 876 | |
---|
[9297] | 877 | !!=========================================================================== |
---|
| 878 | !!=========================================================================== |
---|
| 879 | !!=========================================================================== |
---|
[9296] | 880 | |
---|
[9431] | 881 | SUBROUTINE asm_bgc_unlog_2d( pbkg, pinc_log, pinc_nonlog ) |
---|
| 882 | !!------------------------------------------------------------------------ |
---|
| 883 | !! *** ROUTINE asm_bgc_init_incs *** |
---|
| 884 | !! |
---|
| 885 | !! ** Purpose : convert log increments to non-log |
---|
| 886 | !! |
---|
| 887 | !! ** Method : need to account for model background, |
---|
| 888 | !! cannot simply do 10^log_inc. Need to: |
---|
| 889 | !! 1) Add log_inc to log10(background) to get log10(analysis) |
---|
| 890 | !! 2) Take 10^log10(analysis) to get analysis |
---|
| 891 | !! 3) Subtract background from analysis to get non-log incs |
---|
| 892 | !! |
---|
| 893 | !! ** Action : return non-log increments |
---|
| 894 | !! |
---|
[13191] | 895 | !! References : |
---|
[9431] | 896 | !!------------------------------------------------------------------------ |
---|
| 897 | !! |
---|
| 898 | REAL(wp), INTENT(in ), DIMENSION(jpi,jpj) :: pbkg ! Background |
---|
| 899 | REAL(wp), INTENT(in ), DIMENSION(jpi,jpj) :: pinc_log ! Log incs |
---|
| 900 | REAL(wp), INTENT( out), DIMENSION(jpi,jpj) :: pinc_nonlog ! Non-log incs |
---|
| 901 | ! |
---|
| 902 | INTEGER :: ji, jj ! Loop counters |
---|
| 903 | !! |
---|
| 904 | !!------------------------------------------------------------------------ |
---|
| 905 | |
---|
| 906 | DO jj = 1, jpj |
---|
| 907 | DO ji = 1, jpi |
---|
| 908 | IF ( pbkg(ji,jj) > 0.0 ) THEN |
---|
| 909 | pinc_nonlog(ji,jj) = 10**( LOG10( pbkg(ji,jj) ) + & |
---|
| 910 | & pinc_log(ji,jj) ) & |
---|
| 911 | & - pbkg(ji,jj) |
---|
| 912 | ELSE |
---|
| 913 | pinc_nonlog(ji,jj) = 0.0 |
---|
| 914 | ENDIF |
---|
| 915 | END DO |
---|
| 916 | END DO |
---|
| 917 | |
---|
| 918 | END SUBROUTINE asm_bgc_unlog_2d |
---|
| 919 | |
---|
| 920 | !!=========================================================================== |
---|
| 921 | !!=========================================================================== |
---|
| 922 | !!=========================================================================== |
---|
| 923 | |
---|
[13354] | 924 | SUBROUTINE asm_bgc_unlog_3d( pbkg, pinc_log, pinc_nonlog ) |
---|
| 925 | !!------------------------------------------------------------------------ |
---|
| 926 | !! *** ROUTINE asm_bgc_init_incs *** |
---|
| 927 | !! |
---|
| 928 | !! ** Purpose : convert log increments to non-log |
---|
| 929 | !! |
---|
| 930 | !! ** Method : need to account for model background, |
---|
| 931 | !! cannot simply do 10^log_inc. Need to: |
---|
| 932 | !! 1) Add log_inc to log10(background) to get log10(analysis) |
---|
| 933 | !! 2) Take 10^log10(analysis) to get analysis |
---|
| 934 | !! 3) Subtract background from analysis to get non-log incs |
---|
| 935 | !! |
---|
| 936 | !! ** Action : return non-log increments |
---|
| 937 | !! |
---|
| 938 | !! References : |
---|
| 939 | !!------------------------------------------------------------------------ |
---|
| 940 | !! |
---|
| 941 | REAL(wp), INTENT(in ), DIMENSION(jpi,jpj,jpk) :: pbkg ! Background |
---|
| 942 | REAL(wp), INTENT(in ), DIMENSION(jpi,jpj,jpk) :: pinc_log ! Log incs |
---|
| 943 | REAL(wp), INTENT( out), DIMENSION(jpi,jpj,jpk) :: pinc_nonlog ! Non-log incs |
---|
| 944 | ! |
---|
| 945 | INTEGER :: ji, jj, jk ! Loop counters |
---|
| 946 | !! |
---|
| 947 | !!------------------------------------------------------------------------ |
---|
| 948 | |
---|
| 949 | DO jk = 1, jpk |
---|
| 950 | DO jj = 1, jpj |
---|
| 951 | DO ji = 1, jpi |
---|
| 952 | IF ( pbkg(ji,jj,jk) > 0.0 ) THEN |
---|
| 953 | pinc_nonlog(ji,jj,jk) = 10**( LOG10( pbkg(ji,jj,jk) ) + & |
---|
| 954 | & pinc_log(ji,jj,jk) ) & |
---|
| 955 | & - pbkg(ji,jj,jk) |
---|
| 956 | ELSE |
---|
| 957 | pinc_nonlog(ji,jj,jk) = 0.0 |
---|
| 958 | ENDIF |
---|
| 959 | END DO |
---|
| 960 | END DO |
---|
| 961 | END DO |
---|
| 962 | |
---|
| 963 | END SUBROUTINE asm_bgc_unlog_3d |
---|
| 964 | |
---|
| 965 | !!=========================================================================== |
---|
| 966 | !!=========================================================================== |
---|
| 967 | !!=========================================================================== |
---|
| 968 | |
---|
[9326] | 969 | SUBROUTINE phyto2d_asm_inc( kt, ll_asmdin, ll_asmiau, kcycper, pwgtiau ) |
---|
[9297] | 970 | !!------------------------------------------------------------------------ |
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[9326] | 971 | !! *** ROUTINE phyto2d_asm_inc *** |
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[13191] | 972 | !! |
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[9296] | 973 | !! ** Purpose : Apply the chlorophyll assimilation increments. |
---|
| 974 | !! |
---|
| 975 | !! ** Method : Calculate increments to state variables using nitrogen |
---|
| 976 | !! balancing. |
---|
| 977 | !! Direct initialization or Incremental Analysis Updating. |
---|
| 978 | !! |
---|
[13191] | 979 | !! ** Action : |
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[9297] | 980 | !!------------------------------------------------------------------------ |
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[9296] | 981 | INTEGER, INTENT(IN) :: kt ! Current time step |
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| 982 | LOGICAL, INTENT(IN) :: ll_asmdin ! Flag for direct initialisation |
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| 983 | LOGICAL, INTENT(IN) :: ll_asmiau ! Flag for incremental analysis update |
---|
| 984 | INTEGER, INTENT(IN) :: kcycper ! Dimension of pwgtiau |
---|
| 985 | REAL(wp), DIMENSION(kcycper), INTENT(IN) :: pwgtiau ! IAU weights |
---|
| 986 | ! |
---|
[13354] | 987 | INTEGER :: jk ! Loop counter |
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| 988 | INTEGER :: it ! Index |
---|
| 989 | REAL(wp) :: zincwgt ! IAU weight for current time step |
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| 990 | REAL(wp) :: zincper ! IAU interval in seconds |
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| 991 | REAL(wp), DIMENSION(jpi,jpj) :: zmld ! Mixed layer depth |
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| 992 | REAL(wp), DIMENSION(jpi,jpj,1) :: zinc_chltot ! Local chltot incs |
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| 993 | REAL(wp), DIMENSION(jpi,jpj) :: zbkg_chltot ! Local chltot bkg |
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| 994 | REAL(wp), DIMENSION(jpi,jpj,1) :: zinc_phytot ! Local phytot incs |
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| 995 | REAL(wp), DIMENSION(jpi,jpj) :: zbkg_phytot ! Local phytot bkg |
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[10141] | 996 | #if defined key_medusa |
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[13354] | 997 | REAL(wp), DIMENSION(jpi,jpj,1) :: zinc_chldia ! Local chldia incs |
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| 998 | REAL(wp), DIMENSION(jpi,jpj) :: zbkg_chldia ! Local chldia bkg |
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| 999 | REAL(wp), DIMENSION(jpi,jpj,1) :: zinc_chlnon ! Local chlnon incs |
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| 1000 | REAL(wp), DIMENSION(jpi,jpj) :: zbkg_chlnon ! Local chlnon bkg |
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| 1001 | REAL(wp), DIMENSION(jpi,jpj,1) :: zinc_phydia ! Local phydia incs |
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| 1002 | REAL(wp), DIMENSION(jpi,jpj) :: zbkg_phydia ! Local phydia bkg |
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| 1003 | REAL(wp), DIMENSION(jpi,jpj,1) :: zinc_phynon ! Local phynon incs |
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| 1004 | REAL(wp), DIMENSION(jpi,jpj) :: zbkg_phynon ! Local phynon bkg |
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[9431] | 1005 | #endif |
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[13354] | 1006 | REAL(wp), DIMENSION(jpi,jpj,1) :: zpgrow_avg_bkg ! Local pgrow_avg_bkg |
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| 1007 | REAL(wp), DIMENSION(jpi,jpj,1) :: zploss_avg_bkg ! Local ploss_avg_bkg |
---|
| 1008 | REAL(wp), DIMENSION(jpi,jpj,1) :: zphyt_avg_bkg ! Local phyt_avg_bkg |
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[9297] | 1009 | !!------------------------------------------------------------------------ |
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[13191] | 1010 | |
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[9296] | 1011 | IF ( kt <= nit000 ) THEN |
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| 1012 | |
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[9431] | 1013 | ! Un-log any log increments for passing to balancing routines |
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[9435] | 1014 | ! Remember that two sets of non-log increments should not be |
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| 1015 | ! expected to be in the same ratio as their log equivalents |
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[13191] | 1016 | |
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[9431] | 1017 | ! Total chlorophyll |
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| 1018 | IF ( ln_slchltotinc ) THEN |
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[10141] | 1019 | #if defined key_medusa |
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[9431] | 1020 | zbkg_chltot(:,:) = tracer_bkg(:,:,1,jpchn) + tracer_bkg(:,:,1,jpchd) |
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| 1021 | #elif defined key_hadocc |
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| 1022 | zbkg_chltot(:,:) = chl_bkg(:,:,1) |
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| 1023 | #endif |
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[13354] | 1024 | CALL asm_bgc_unlog_2d( zbkg_chltot, slchltot_bkginc, zinc_chltot(:,:,1) ) |
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[9431] | 1025 | ELSE IF ( ln_schltotinc ) THEN |
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[13354] | 1026 | zinc_chltot(:,:,1) = schltot_bkginc(:,:) |
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[9431] | 1027 | ELSE |
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[13354] | 1028 | zinc_chltot(:,:,:) = 0.0 |
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[9431] | 1029 | ENDIF |
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| 1030 | |
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[10141] | 1031 | #if defined key_medusa |
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[9431] | 1032 | ! Diatom chlorophyll |
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| 1033 | IF ( ln_slchldiainc ) THEN |
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| 1034 | zbkg_chldia(:,:) = tracer_bkg(:,:,1,jpchd) |
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[13354] | 1035 | CALL asm_bgc_unlog_2d( zbkg_chldia, slchldia_bkginc, zinc_chldia(:,:,1) ) |
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[9431] | 1036 | ELSE |
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[13354] | 1037 | zinc_chldia(:,:,:) = 0.0 |
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[9431] | 1038 | ENDIF |
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| 1039 | #endif |
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| 1040 | |
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[10141] | 1041 | #if defined key_medusa |
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[9431] | 1042 | ! Non-diatom chlorophyll |
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| 1043 | IF ( ln_slchlnoninc ) THEN |
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| 1044 | zbkg_chlnon(:,:) = tracer_bkg(:,:,1,jpchn) |
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[13354] | 1045 | CALL asm_bgc_unlog_2d( zbkg_chlnon, slchlnon_bkginc, zinc_chlnon(:,:,1) ) |
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[9431] | 1046 | ELSE |
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[13354] | 1047 | zinc_chlnon(:,:,:) = 0.0 |
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[9431] | 1048 | ENDIF |
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| 1049 | #endif |
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| 1050 | |
---|
| 1051 | ! Total phytoplankton carbon |
---|
| 1052 | IF ( ln_slphytotinc ) THEN |
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[10141] | 1053 | #if defined key_medusa |
---|
[9431] | 1054 | zbkg_phytot(:,:) = (trn(:,:,1,jpphn) * xthetapn) + (trn(:,:,1,jpphd) * xthetapd) |
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| 1055 | #elif defined key_hadocc |
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| 1056 | zbkg_phytot(:,:) = trn(:,:,1,jp_had_phy) * c2n_p |
---|
| 1057 | #endif |
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[13354] | 1058 | CALL asm_bgc_unlog_2d( zbkg_phytot, slphytot_bkginc, zinc_phytot(:,:,1) ) |
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[9431] | 1059 | ELSE |
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[13354] | 1060 | zinc_phytot(:,:,:) = 0.0 |
---|
[9431] | 1061 | ENDIF |
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| 1062 | |
---|
[10141] | 1063 | #if defined key_medusa |
---|
[9431] | 1064 | ! Diatom phytoplankton carbon |
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| 1065 | IF ( ln_slphydiainc ) THEN |
---|
| 1066 | zbkg_phydia(:,:) = trn(:,:,1,jpphd) * xthetapd |
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[13354] | 1067 | CALL asm_bgc_unlog_2d( zbkg_phydia, slphydia_bkginc, zinc_phydia(:,:,1) ) |
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[9431] | 1068 | ELSE |
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[13354] | 1069 | zinc_phydia(:,:,:) = 0.0 |
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[9431] | 1070 | ENDIF |
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| 1071 | #endif |
---|
| 1072 | |
---|
[10141] | 1073 | #if defined key_medusa |
---|
[9431] | 1074 | ! Non-diatom phytoplankton carbon |
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| 1075 | IF ( ln_slphynoninc ) THEN |
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| 1076 | zbkg_phynon(:,:) = trn(:,:,1,jpphn) * xthetapn |
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[13354] | 1077 | CALL asm_bgc_unlog_2d( zbkg_phynon, slphynon_bkginc, zinc_phynon(:,:,1) ) |
---|
[9431] | 1078 | ELSE |
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[13354] | 1079 | zinc_phynon(:,:,:) = 0.0 |
---|
[9431] | 1080 | ENDIF |
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| 1081 | #endif |
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| 1082 | |
---|
| 1083 | ! Select mixed layer |
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| 1084 | IF ( ll_asmdin ) THEN |
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[10141] | 1085 | #if defined key_top && ( defined key_hadocc || defined key_medusa ) |
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[9431] | 1086 | CALL ctl_warn( ' Doing direct initialisation with ocean colour assimilation', & |
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| 1087 | & ' Mixed layer depth taken to be background maximum mld_max_bkg' ) |
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| 1088 | zmld(:,:) = mld_max_bkg(:,:) |
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[10057] | 1089 | #else |
---|
| 1090 | CALL ctl_stop( ' Should not be doing biogeochemical assimilation without key_top' ) |
---|
| 1091 | #endif |
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[9431] | 1092 | ELSE |
---|
| 1093 | SELECT CASE( mld_choice_bgc ) |
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| 1094 | CASE ( 1 ) ! Turbocline/mixing depth [W points] |
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| 1095 | zmld(:,:) = hmld(:,:) |
---|
| 1096 | CASE ( 2 ) ! Density criterion (0.01 kg/m^3 change from 10m) [W points] |
---|
| 1097 | zmld(:,:) = hmlp(:,:) |
---|
| 1098 | CASE ( 3 ) ! Kara MLD [Interpolated] |
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| 1099 | #if defined key_karaml |
---|
| 1100 | IF ( ln_kara ) THEN |
---|
| 1101 | zmld(:,:) = hmld_kara(:,:) |
---|
| 1102 | ELSE |
---|
| 1103 | CALL ctl_stop( ' Kara mixed layer requested for phyto2d assimilation,', & |
---|
| 1104 | & ' but ln_kara=.false.' ) |
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| 1105 | ENDIF |
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| 1106 | #else |
---|
| 1107 | CALL ctl_stop( ' Kara mixed layer requested for phyto2d assimilation,', & |
---|
| 1108 | & ' but is not defined' ) |
---|
| 1109 | #endif |
---|
| 1110 | CASE ( 4 ) ! Temperature criterion (0.2 K change from surface) [T points] |
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| 1111 | !zmld(:,:) = hmld_tref(:,:) |
---|
[9432] | 1112 | CALL ctl_stop( ' hmld_tref mixed layer requested for phyto2d assimilation,', & |
---|
[9431] | 1113 | & ' but is not available in this version' ) |
---|
| 1114 | CASE ( 5 ) ! Density criterion (0.01 kg/m^3 change from 10m) [T points] |
---|
| 1115 | zmld(:,:) = hmlpt(:,:) |
---|
| 1116 | END SELECT |
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| 1117 | ENDIF |
---|
| 1118 | |
---|
[9296] | 1119 | zincper = (nitiaufin_r - nitiaustr_r + 1) * rdt |
---|
[13354] | 1120 | |
---|
| 1121 | zpgrow_avg_bkg(:,:,1) = pgrow_avg_bkg(:,:) |
---|
| 1122 | zploss_avg_bkg(:,:,1) = ploss_avg_bkg(:,:) |
---|
| 1123 | zphyt_avg_bkg(:,:,1) = phyt_avg_bkg(:,:) |
---|
[9296] | 1124 | |
---|
[10141] | 1125 | #if defined key_medusa |
---|
[13354] | 1126 | CALL asm_phyto_bal_medusa( 1, & |
---|
| 1127 | & (ln_slchltotinc .OR. ln_schltotinc), & |
---|
| 1128 | & zinc_chltot, & |
---|
| 1129 | & ln_slchldiainc, & |
---|
| 1130 | & zinc_chldia, & |
---|
| 1131 | & ln_slchlnoninc, & |
---|
| 1132 | & zinc_chlnon, & |
---|
| 1133 | & ln_slphytotinc, & |
---|
| 1134 | & zinc_phytot, & |
---|
| 1135 | & ln_slphydiainc, & |
---|
| 1136 | & zinc_phydia, & |
---|
| 1137 | & ln_slphynoninc, & |
---|
| 1138 | & zinc_phynon, & |
---|
| 1139 | & zincper, & |
---|
| 1140 | & rn_maxchlinc, ln_phytobal, zmld, & |
---|
| 1141 | & zpgrow_avg_bkg, zploss_avg_bkg, & |
---|
| 1142 | & zphyt_avg_bkg, mld_max_bkg, & |
---|
| 1143 | & tracer_bkg, phyto2d_balinc ) |
---|
[9296] | 1144 | #elif defined key_hadocc |
---|
[13354] | 1145 | CALL asm_phyto_bal_hadocc( 1, & |
---|
| 1146 | & (ln_slchltotinc .OR. ln_schltotinc), & |
---|
| 1147 | & zinc_chltot, & |
---|
| 1148 | & ln_slphytotinc, & |
---|
| 1149 | & zinc_phytot, & |
---|
| 1150 | & zincper, & |
---|
| 1151 | & rn_maxchlinc, ln_phytobal, zmld, & |
---|
| 1152 | & zpgrow_avg_bkg, zploss_avg_bkg, & |
---|
| 1153 | & zphyt_avg_bkg, mld_max_bkg, & |
---|
| 1154 | & cchl_p_bkg(:,:,1), & |
---|
| 1155 | & tracer_bkg, phyto2d_balinc ) |
---|
[9296] | 1156 | #else |
---|
[9431] | 1157 | CALL ctl_stop( 'Attempting to assimilate phyto2d data, ', & |
---|
[9296] | 1158 | & 'but not defined a biogeochemical model' ) |
---|
| 1159 | #endif |
---|
| 1160 | |
---|
| 1161 | ENDIF |
---|
| 1162 | |
---|
| 1163 | IF ( ll_asmiau ) THEN |
---|
| 1164 | |
---|
| 1165 | !-------------------------------------------------------------------- |
---|
| 1166 | ! Incremental Analysis Updating |
---|
| 1167 | !-------------------------------------------------------------------- |
---|
| 1168 | |
---|
| 1169 | IF ( ( kt >= nitiaustr_r ).AND.( kt <= nitiaufin_r ) ) THEN |
---|
| 1170 | |
---|
| 1171 | it = kt - nit000 + 1 |
---|
| 1172 | zincwgt = pwgtiau(it) ! IAU weight for the current time step |
---|
| 1173 | ! note this is not a tendency so should not be divided by rdt |
---|
| 1174 | |
---|
| 1175 | IF(lwp) THEN |
---|
[13191] | 1176 | WRITE(numout,*) |
---|
[9431] | 1177 | WRITE(numout,*) 'phyto2d_asm_inc : phyto2d IAU at time step = ', & |
---|
[9296] | 1178 | & kt,' with IAU weight = ', pwgtiau(it) |
---|
| 1179 | WRITE(numout,*) '~~~~~~~~~~~~' |
---|
| 1180 | ENDIF |
---|
| 1181 | |
---|
| 1182 | ! Update the biogeochemical variables |
---|
| 1183 | ! Add directly to trn and trb, rather than to tra, because tra gets |
---|
| 1184 | ! reset to zero at the start of trc_stp, called after this routine |
---|
[10141] | 1185 | #if defined key_medusa |
---|
[9382] | 1186 | WHERE( phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1187 | & trn(:,:,:,jp_msa0:jp_msa1) + phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt > 0.0_wp ) |
---|
[9333] | 1188 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1189 | & phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1190 | trb(:,:,:,jp_msa0:jp_msa1) = trb(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1191 | & phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1192 | END WHERE |
---|
[9296] | 1193 | #elif defined key_hadocc |
---|
[9382] | 1194 | WHERE( phyto2d_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp .OR. & |
---|
| 1195 | & trn(:,:,:,jp_had0:jp_had1) + phyto2d_balinc(:,:,:,jp_had0:jp_had1) * zincwgt > 0.0_wp ) |
---|
[9333] | 1196 | trn(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) + & |
---|
| 1197 | & phyto2d_balinc(:,:,:,jp_had0:jp_had1) * zincwgt |
---|
| 1198 | trb(:,:,:,jp_had0:jp_had1) = trb(:,:,:,jp_had0:jp_had1) + & |
---|
| 1199 | & phyto2d_balinc(:,:,:,jp_had0:jp_had1) * zincwgt |
---|
| 1200 | END WHERE |
---|
[9296] | 1201 | #endif |
---|
| 1202 | |
---|
| 1203 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1204 | ! which is called at end of model run |
---|
| 1205 | ENDIF |
---|
| 1206 | |
---|
[13191] | 1207 | ELSEIF ( ll_asmdin ) THEN |
---|
[9296] | 1208 | |
---|
| 1209 | !-------------------------------------------------------------------- |
---|
| 1210 | ! Direct Initialization |
---|
| 1211 | !-------------------------------------------------------------------- |
---|
[13191] | 1212 | |
---|
[9296] | 1213 | IF ( kt == nitdin_r ) THEN |
---|
| 1214 | |
---|
| 1215 | neuler = 0 ! Force Euler forward step |
---|
| 1216 | |
---|
| 1217 | ! Initialize the now fields with the background + increment |
---|
| 1218 | ! Background currently is what the model is initialised with |
---|
[9333] | 1219 | CALL ctl_warn( ' Doing direct initialisation with phyto2d assimilation', & |
---|
[9296] | 1220 | & ' Background state is taken from model rather than background file' ) |
---|
[10141] | 1221 | #if defined key_medusa |
---|
[9382] | 1222 | WHERE( phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1223 | & trn(:,:,:,jp_msa0:jp_msa1) + phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp ) |
---|
[9333] | 1224 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1225 | & phyto2d_balinc(:,:,:,jp_msa0:jp_msa1) |
---|
| 1226 | trb(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) |
---|
| 1227 | END WHERE |
---|
[9296] | 1228 | #elif defined key_hadocc |
---|
[9382] | 1229 | WHERE( phyto2d_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp .OR. & |
---|
| 1230 | & trn(:,:,:,jp_had0:jp_had1) + phyto2d_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp ) |
---|
[9333] | 1231 | trn(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) + & |
---|
| 1232 | & phyto2d_balinc(:,:,:,jp_had0:jp_had1) |
---|
| 1233 | trb(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) |
---|
| 1234 | END WHERE |
---|
[9296] | 1235 | #endif |
---|
[13191] | 1236 | |
---|
[9296] | 1237 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1238 | ! which is called at end of model run |
---|
| 1239 | ENDIF |
---|
| 1240 | ! |
---|
| 1241 | ENDIF |
---|
| 1242 | ! |
---|
[9326] | 1243 | END SUBROUTINE phyto2d_asm_inc |
---|
[9296] | 1244 | |
---|
[9297] | 1245 | !!=========================================================================== |
---|
| 1246 | !!=========================================================================== |
---|
| 1247 | !!=========================================================================== |
---|
[9296] | 1248 | |
---|
[9326] | 1249 | SUBROUTINE phyto3d_asm_inc( kt, ll_asmdin, ll_asmiau, kcycper, pwgtiau ) |
---|
| 1250 | !!------------------------------------------------------------------------ |
---|
| 1251 | !! *** ROUTINE phyto3d_asm_inc *** |
---|
[13191] | 1252 | !! |
---|
[9326] | 1253 | !! ** Purpose : Apply the profile chlorophyll assimilation increments. |
---|
| 1254 | !! |
---|
| 1255 | !! ** Method : Calculate increments to state variables. |
---|
| 1256 | !! Direct initialization or Incremental Analysis Updating. |
---|
| 1257 | !! |
---|
[13191] | 1258 | !! ** Action : |
---|
[9326] | 1259 | !!------------------------------------------------------------------------ |
---|
| 1260 | INTEGER, INTENT(IN) :: kt ! Current time step |
---|
| 1261 | LOGICAL, INTENT(IN) :: ll_asmdin ! Flag for direct initialisation |
---|
| 1262 | LOGICAL, INTENT(IN) :: ll_asmiau ! Flag for incremental analysis update |
---|
| 1263 | INTEGER, INTENT(IN) :: kcycper ! Dimension of pwgtiau |
---|
| 1264 | REAL(wp), DIMENSION(kcycper), INTENT(IN) :: pwgtiau ! IAU weights |
---|
| 1265 | ! |
---|
[9381] | 1266 | INTEGER :: ji, jj, jk ! Loop counters |
---|
| 1267 | INTEGER :: it ! Index |
---|
[13354] | 1268 | REAL(wp) :: zincper ! IAU interval in seconds |
---|
[9381] | 1269 | REAL(wp) :: zincwgt ! IAU weight for timestep |
---|
[13354] | 1270 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: zinc_chltot ! Chlorophyll increments |
---|
| 1271 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: zbkg_chltot ! Chlorophyll background |
---|
| 1272 | REAL(wp), DIMENSION(jpi,jpj) :: zdummy_2d ! Dummy array for call |
---|
| 1273 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: zdummy_3d ! Dummy array for call |
---|
[9326] | 1274 | !!------------------------------------------------------------------------ |
---|
| 1275 | |
---|
| 1276 | IF ( kt <= nit000 ) THEN |
---|
| 1277 | |
---|
| 1278 | IF ( ln_plchltotinc ) THEN |
---|
[10141] | 1279 | #if defined key_medusa |
---|
[13354] | 1280 | zbkg_chltot(:,:,:) = tracer_bkg(:,:,:,jpchn) + tracer_bkg(:,:,:,jpchd) |
---|
[9326] | 1281 | #elif defined key_hadocc |
---|
[13354] | 1282 | zbkg_chltot(:,:,:) = chl_bkg(:,:,:) |
---|
[9326] | 1283 | #endif |
---|
[13354] | 1284 | CALL asm_bgc_unlog_3d( zbkg_chltot, plchltot_bkginc, zinc_chltot ) |
---|
[9326] | 1285 | ELSE IF ( ln_pchltotinc ) THEN |
---|
[13354] | 1286 | zinc_chltot(:,:,:) = pchltot_bkginc(:,:,:) |
---|
[9326] | 1287 | ENDIF |
---|
| 1288 | |
---|
[13354] | 1289 | zincper = (nitiaufin_r - nitiaustr_r + 1) * rdt |
---|
| 1290 | |
---|
[10141] | 1291 | #if defined key_medusa |
---|
[13354] | 1292 | CALL asm_phyto_bal_medusa( jpk, & |
---|
| 1293 | & (ln_plchltotinc .OR. ln_pchltotinc), & |
---|
| 1294 | & zinc_chltot, & |
---|
| 1295 | & .FALSE., & |
---|
| 1296 | & zdummy_3d, & |
---|
| 1297 | & .FALSE., & |
---|
| 1298 | & zdummy_3d, & |
---|
| 1299 | & .FALSE., & |
---|
| 1300 | & zdummy_3d, & |
---|
| 1301 | & .FALSE., & |
---|
| 1302 | & zdummy_3d, & |
---|
| 1303 | & .FALSE., & |
---|
| 1304 | & zdummy_3d, & |
---|
| 1305 | & zincper, & |
---|
| 1306 | & rn_maxchlinc, ln_phytobal, zdummy_2d, & |
---|
| 1307 | & pgrow_avg_3d_bkg, ploss_avg_3d_bkg, & |
---|
| 1308 | & phyt_avg_3d_bkg, mld_max_bkg, & |
---|
| 1309 | & tracer_bkg, phyto3d_balinc ) |
---|
[9326] | 1310 | #elif defined key_hadocc |
---|
[13354] | 1311 | CALL asm_phyto_bal_hadocc( jpk, & |
---|
| 1312 | & (ln_plchltotinc .OR. ln_pchltotinc), & |
---|
| 1313 | & zinc_chltot, & |
---|
| 1314 | & .FALSE., & |
---|
| 1315 | & zdummy_3d, & |
---|
| 1316 | & zincper, & |
---|
| 1317 | & rn_maxchlinc, ln_phytobal, zdummy_2d, & |
---|
| 1318 | & pgrow_avg_3d_bkg, ploss_avg_3d_bkg, & |
---|
| 1319 | & phyt_avg_3d_bkg, mld_max_bkg, & |
---|
| 1320 | & cchl_p_bkg, & |
---|
| 1321 | & tracer_bkg, phyto3d_balinc ) |
---|
[9326] | 1322 | #else |
---|
[13354] | 1323 | CALL ctl_stop( 'Attempting to assimilate phyto3d data, ', & |
---|
[9326] | 1324 | & 'but not defined a biogeochemical model' ) |
---|
| 1325 | #endif |
---|
| 1326 | |
---|
| 1327 | ENDIF |
---|
| 1328 | |
---|
| 1329 | IF ( ll_asmiau ) THEN |
---|
| 1330 | |
---|
| 1331 | !-------------------------------------------------------------------- |
---|
| 1332 | ! Incremental Analysis Updating |
---|
| 1333 | !-------------------------------------------------------------------- |
---|
| 1334 | |
---|
| 1335 | IF ( ( kt >= nitiaustr_r ).AND.( kt <= nitiaufin_r ) ) THEN |
---|
| 1336 | |
---|
| 1337 | it = kt - nit000 + 1 |
---|
| 1338 | zincwgt = pwgtiau(it) ! IAU weight for the current time step |
---|
| 1339 | ! note this is not a tendency so should not be divided by rdt |
---|
| 1340 | |
---|
| 1341 | IF(lwp) THEN |
---|
[13191] | 1342 | WRITE(numout,*) |
---|
[9326] | 1343 | WRITE(numout,*) 'phyto3d_asm_inc : phyto3d IAU at time step = ', & |
---|
| 1344 | & kt,' with IAU weight = ', pwgtiau(it) |
---|
| 1345 | WRITE(numout,*) '~~~~~~~~~~~~' |
---|
| 1346 | ENDIF |
---|
| 1347 | |
---|
| 1348 | ! Update the biogeochemical variables |
---|
| 1349 | ! Add directly to trn and trb, rather than to tra, because tra gets |
---|
| 1350 | ! reset to zero at the start of trc_stp, called after this routine |
---|
[10141] | 1351 | #if defined key_medusa |
---|
[9382] | 1352 | WHERE( phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1353 | & trn(:,:,:,jp_msa0:jp_msa1) + phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt > 0.0_wp ) |
---|
[9326] | 1354 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1355 | & phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1356 | trb(:,:,:,jp_msa0:jp_msa1) = trb(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1357 | & phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1358 | END WHERE |
---|
| 1359 | #elif defined key_hadocc |
---|
[9382] | 1360 | WHERE( phyto3d_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp .OR. & |
---|
| 1361 | & trn(:,:,:,jp_had0:jp_had1) + phyto3d_balinc(:,:,:,jp_had0:jp_had1) * zincwgt > 0.0_wp ) |
---|
[9326] | 1362 | trn(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) + & |
---|
| 1363 | & phyto3d_balinc(:,:,:,jp_had0:jp_had1) * zincwgt |
---|
| 1364 | trb(:,:,:,jp_had0:jp_had1) = trb(:,:,:,jp_had0:jp_had1) + & |
---|
| 1365 | & phyto3d_balinc(:,:,:,jp_had0:jp_had1) * zincwgt |
---|
| 1366 | END WHERE |
---|
| 1367 | #endif |
---|
| 1368 | |
---|
| 1369 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1370 | ! which is called at end of model run |
---|
| 1371 | ENDIF |
---|
| 1372 | |
---|
[13191] | 1373 | ELSEIF ( ll_asmdin ) THEN |
---|
[9326] | 1374 | |
---|
| 1375 | !-------------------------------------------------------------------- |
---|
| 1376 | ! Direct Initialization |
---|
| 1377 | !-------------------------------------------------------------------- |
---|
[13191] | 1378 | |
---|
[9326] | 1379 | IF ( kt == nitdin_r ) THEN |
---|
| 1380 | |
---|
| 1381 | neuler = 0 ! Force Euler forward step |
---|
| 1382 | |
---|
| 1383 | ! Initialize the now fields with the background + increment |
---|
| 1384 | ! Background currently is what the model is initialised with |
---|
| 1385 | CALL ctl_warn( ' Doing direct initialisation with phyto3d assimilation', & |
---|
| 1386 | & ' Background state is taken from model rather than background file' ) |
---|
[10141] | 1387 | #if defined key_medusa |
---|
[9382] | 1388 | WHERE( phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1389 | & trn(:,:,:,jp_msa0:jp_msa1) + phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp ) |
---|
[9326] | 1390 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1391 | & phyto3d_balinc(:,:,:,jp_msa0:jp_msa1) |
---|
| 1392 | trb(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) |
---|
| 1393 | END WHERE |
---|
| 1394 | #elif defined key_hadocc |
---|
[9382] | 1395 | WHERE( phyto3d_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp .OR. & |
---|
| 1396 | & trn(:,:,:,jp_had0:jp_had1) + phyto3d_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp ) |
---|
[9326] | 1397 | trn(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) + & |
---|
| 1398 | & phyto3d_balinc(:,:,:,jp_had0:jp_had1) |
---|
| 1399 | trb(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) |
---|
| 1400 | END WHERE |
---|
| 1401 | #endif |
---|
[13191] | 1402 | |
---|
[9326] | 1403 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1404 | ! which is called at end of model run |
---|
| 1405 | ENDIF |
---|
| 1406 | ! |
---|
| 1407 | ENDIF |
---|
| 1408 | ! |
---|
| 1409 | END SUBROUTINE phyto3d_asm_inc |
---|
| 1410 | |
---|
| 1411 | !!=========================================================================== |
---|
| 1412 | !!=========================================================================== |
---|
| 1413 | !!=========================================================================== |
---|
| 1414 | |
---|
[9322] | 1415 | SUBROUTINE pco2_asm_inc( kt, ll_asmdin, ll_asmiau, kcycper, pwgtiau, & |
---|
| 1416 | & ll_trainc, pt_bkginc, ps_bkginc ) |
---|
[9297] | 1417 | !!------------------------------------------------------------------------ |
---|
[9296] | 1418 | !! *** ROUTINE pco2_asm_inc *** |
---|
[13191] | 1419 | !! |
---|
[9296] | 1420 | !! ** Purpose : Apply the pco2/fco2 assimilation increments. |
---|
| 1421 | !! |
---|
| 1422 | !! ** Method : Calculate increments to state variables using carbon |
---|
| 1423 | !! balancing. |
---|
| 1424 | !! Direct initialization or Incremental Analysis Updating. |
---|
| 1425 | !! |
---|
[13191] | 1426 | !! ** Action : |
---|
[9297] | 1427 | !!------------------------------------------------------------------------ |
---|
[9296] | 1428 | INTEGER, INTENT(IN) :: kt ! Current time step |
---|
| 1429 | LOGICAL, INTENT(IN) :: ll_asmdin ! Flag for direct initialisation |
---|
| 1430 | LOGICAL, INTENT(IN) :: ll_asmiau ! Flag for incremental analysis update |
---|
| 1431 | INTEGER, INTENT(IN) :: kcycper ! Dimension of pwgtiau |
---|
| 1432 | REAL(wp), DIMENSION(kcycper), INTENT(IN) :: pwgtiau ! IAU weights |
---|
| 1433 | LOGICAL, INTENT(IN) :: ll_trainc ! Flag for T/S increments |
---|
| 1434 | REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT(IN) :: pt_bkginc ! T increments |
---|
| 1435 | REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT(IN) :: ps_bkginc ! S increments |
---|
| 1436 | ! |
---|
| 1437 | INTEGER :: ji, jj, jk ! Loop counters |
---|
| 1438 | INTEGER :: it ! Index |
---|
| 1439 | INTEGER :: jkmax ! Index of mixed layer depth |
---|
| 1440 | REAL(wp) :: zincwgt ! IAU weight for current time step |
---|
| 1441 | REAL(wp), DIMENSION(jpi,jpj) :: zmld ! Mixed layer depth for balancing |
---|
| 1442 | REAL(wp), DIMENSION(jpi,jpj) :: pco2_bkginc_temp ! For fCO2 conversion |
---|
| 1443 | REAL(wp), DIMENSION(jpi,jpj) :: dic_bkg_temp ! DIC background |
---|
| 1444 | REAL(wp), DIMENSION(jpi,jpj) :: alk_bkg_temp ! Alkalinity background |
---|
| 1445 | REAL(wp), DIMENSION(jpi,jpj) :: tem_bkg_temp ! Temperature background |
---|
| 1446 | REAL(wp), DIMENSION(jpi,jpj) :: sal_bkg_temp ! Salinity background |
---|
| 1447 | REAL(wp), DIMENSION(1) :: patm ! Atmospheric pressure |
---|
| 1448 | REAL(wp), DIMENSION(1) :: phyd ! Hydrostatic pressure |
---|
| 1449 | |
---|
| 1450 | ! Coefficients for fCO2 to pCO2 conversion |
---|
| 1451 | REAL(wp) :: zcoef_fco2_1 = -1636.75 |
---|
| 1452 | REAL(wp) :: zcoef_fco2_2 = 12.0408 |
---|
| 1453 | REAL(wp) :: zcoef_fco2_3 = 0.0327957 |
---|
| 1454 | REAL(wp) :: zcoef_fco2_4 = 0.0000316528 |
---|
| 1455 | REAL(wp) :: zcoef_fco2_5 = 2.0 |
---|
| 1456 | REAL(wp) :: zcoef_fco2_6 = 57.7 |
---|
| 1457 | REAL(wp) :: zcoef_fco2_7 = 0.118 |
---|
| 1458 | REAL(wp) :: zcoef_fco2_8 = 82.0578 |
---|
[9297] | 1459 | !!------------------------------------------------------------------------ |
---|
[9296] | 1460 | |
---|
| 1461 | IF ( kt <= nit000 ) THEN |
---|
| 1462 | |
---|
[9297] | 1463 | !---------------------------------------------------------------------- |
---|
[9296] | 1464 | ! DIC and alkalinity balancing |
---|
[9297] | 1465 | !---------------------------------------------------------------------- |
---|
[9296] | 1466 | |
---|
| 1467 | IF ( ln_sfco2inc ) THEN |
---|
[10141] | 1468 | #if defined key_medusa && defined key_roam |
---|
[9296] | 1469 | ! If assimilating fCO2, then convert to pCO2 using MEDUSA MOCSY subroutine |
---|
| 1470 | patm(1) = 1.0 |
---|
| 1471 | phyd(1) = 0.0 |
---|
| 1472 | DO jj = 1, jpj |
---|
| 1473 | DO ji = 1, jpi |
---|
[9322] | 1474 | CALL f2pCO2( sfco2_bkginc(ji,jj), tsn(ji,jj,1,1), patm, phyd, 1, pco2_bkginc_temp(ji,jj) ) |
---|
[9296] | 1475 | END DO |
---|
| 1476 | END DO |
---|
| 1477 | #else |
---|
| 1478 | ! If assimilating fCO2, then convert to pCO2 using temperature |
---|
| 1479 | ! See flux_gas.F90 within HadOCC for details of calculation |
---|
[9326] | 1480 | pco2_bkginc_temp(:,:) = sfco2_bkginc(:,:) / & |
---|
[9296] | 1481 | & EXP((zcoef_fco2_1 + & |
---|
| 1482 | & zcoef_fco2_2 * (tsn(:,:,1,1)+rt0) - & |
---|
| 1483 | & zcoef_fco2_3 * (tsn(:,:,1,1)+rt0)*(tsn(:,:,1,1)+rt0) + & |
---|
| 1484 | & zcoef_fco2_4 * (tsn(:,:,1,1)+rt0)*(tsn(:,:,1,1)+rt0)*(tsn(:,:,1,1)+rt0) + & |
---|
| 1485 | & zcoef_fco2_5 * (zcoef_fco2_6 - zcoef_fco2_7 * (tsn(:,:,1,1)+rt0))) / & |
---|
| 1486 | & (zcoef_fco2_8 * (tsn(:,:,1,1)+rt0))) |
---|
| 1487 | #endif |
---|
| 1488 | ELSE |
---|
| 1489 | pco2_bkginc_temp(:,:) = spco2_bkginc(:,:) |
---|
| 1490 | ENDIF |
---|
| 1491 | |
---|
| 1492 | ! Account for physics assimilation if required |
---|
| 1493 | IF ( ll_trainc ) THEN |
---|
| 1494 | tem_bkg_temp(:,:) = tsn(:,:,1,1) + pt_bkginc(:,:,1) |
---|
| 1495 | sal_bkg_temp(:,:) = tsn(:,:,1,2) + ps_bkginc(:,:,1) |
---|
| 1496 | ELSE |
---|
| 1497 | tem_bkg_temp(:,:) = tsn(:,:,1,1) |
---|
| 1498 | sal_bkg_temp(:,:) = tsn(:,:,1,2) |
---|
| 1499 | ENDIF |
---|
| 1500 | |
---|
[10141] | 1501 | #if defined key_medusa |
---|
[9381] | 1502 | ! Account for phytoplankton balancing if required |
---|
| 1503 | IF ( ln_phytobal ) THEN |
---|
[13354] | 1504 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
| 1505 | dic_bkg_temp(:,:) = tracer_bkg(:,:,1,jpdic) + phyto2d_balinc(:,:,1,jpdic) |
---|
| 1506 | alk_bkg_temp(:,:) = tracer_bkg(:,:,1,jpalk) + phyto2d_balinc(:,:,1,jpalk) |
---|
| 1507 | ENDIF |
---|
| 1508 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
| 1509 | dic_bkg_temp(:,:) = tracer_bkg(:,:,1,jpdic) + phyto3d_balinc(:,:,1,jpdic) |
---|
| 1510 | alk_bkg_temp(:,:) = tracer_bkg(:,:,1,jpalk) + phyto3d_balinc(:,:,1,jpalk) |
---|
| 1511 | ENDIF |
---|
[9296] | 1512 | ELSE |
---|
| 1513 | dic_bkg_temp(:,:) = tracer_bkg(:,:,1,jpdic) |
---|
| 1514 | alk_bkg_temp(:,:) = tracer_bkg(:,:,1,jpalk) |
---|
| 1515 | ENDIF |
---|
| 1516 | |
---|
| 1517 | CALL asm_pco2_bal( pco2_bkginc_temp(:,:), dic_bkg_temp(:,:), alk_bkg_temp(:,:), & |
---|
| 1518 | & tem_bkg_temp(:,:), sal_bkg_temp(:,:), & |
---|
[9322] | 1519 | & pco2_balinc(:,:,1,jpdic), pco2_balinc(:,:,1,jpalk) ) |
---|
[9296] | 1520 | |
---|
| 1521 | #elif defined key_hadocc |
---|
[9381] | 1522 | ! Account for phytoplankton balancing if required |
---|
| 1523 | IF ( ln_phytobal ) THEN |
---|
[13354] | 1524 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
| 1525 | dic_bkg_temp(:,:) = tracer_bkg(:,:,1,jp_had_dic) + phyto2d_balinc(:,:,1,jp_had_dic) |
---|
| 1526 | alk_bkg_temp(:,:) = tracer_bkg(:,:,1,jp_had_alk) + phyto2d_balinc(:,:,1,jp_had_alk) |
---|
| 1527 | ENDIF |
---|
| 1528 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
| 1529 | dic_bkg_temp(:,:) = tracer_bkg(:,:,1,jp_had_dic) + phyto3d_balinc(:,:,1,jp_had_dic) |
---|
| 1530 | alk_bkg_temp(:,:) = tracer_bkg(:,:,1,jp_had_alk) + phyto3d_balinc(:,:,1,jp_had_alk) |
---|
| 1531 | ENDIF |
---|
[9296] | 1532 | ELSE |
---|
| 1533 | dic_bkg_temp(:,:) = tracer_bkg(:,:,1,jp_had_dic) |
---|
| 1534 | alk_bkg_temp(:,:) = tracer_bkg(:,:,1,jp_had_alk) |
---|
| 1535 | ENDIF |
---|
| 1536 | |
---|
| 1537 | CALL asm_pco2_bal( pco2_bkginc_temp(:,:), dic_bkg_temp(:,:), alk_bkg_temp(:,:), & |
---|
| 1538 | & tem_bkg_temp(:,:), sal_bkg_temp(:,:), & |
---|
[9322] | 1539 | & pco2_balinc(:,:,1,jp_had_dic), pco2_balinc(:,:,1,jp_had_alk) ) |
---|
[9296] | 1540 | |
---|
| 1541 | #else |
---|
| 1542 | CALL ctl_stop( 'Attempting to assimilate pCO2/fCO2, ', & |
---|
| 1543 | & 'but not defined a biogeochemical model' ) |
---|
| 1544 | #endif |
---|
| 1545 | |
---|
| 1546 | ! Select mixed layer |
---|
| 1547 | IF ( ll_asmdin ) THEN |
---|
[10141] | 1548 | #if defined key_hadocc || defined key_medusa |
---|
[9296] | 1549 | CALL ctl_warn( ' Doing direct initialisation with pCO2 assimilation', & |
---|
| 1550 | & ' Mixed layer depth taken to be background maximum mld_max_bkg' ) |
---|
| 1551 | zmld(:,:) = mld_max_bkg(:,:) |
---|
| 1552 | #else |
---|
| 1553 | CALL ctl_stop( 'No biogeochemical model defined for pCO2 assimilation' ) |
---|
| 1554 | #endif |
---|
| 1555 | ELSE |
---|
| 1556 | SELECT CASE( mld_choice_bgc ) |
---|
| 1557 | CASE ( 1 ) ! Turbocline/mixing depth [W points] |
---|
| 1558 | zmld(:,:) = hmld(:,:) |
---|
| 1559 | CASE ( 2 ) ! Density criterion (0.01 kg/m^3 change from 10m) [W points] |
---|
| 1560 | zmld(:,:) = hmlp(:,:) |
---|
| 1561 | CASE ( 3 ) ! Kara MLD [Interpolated] |
---|
| 1562 | #if defined key_karaml |
---|
| 1563 | IF ( ln_kara ) THEN |
---|
| 1564 | zmld(:,:) = hmld_kara(:,:) |
---|
| 1565 | ELSE |
---|
| 1566 | CALL ctl_stop( ' Kara mixed layer requested for pCO2 assimilation,', & |
---|
| 1567 | & ' but ln_kara=.false.' ) |
---|
| 1568 | ENDIF |
---|
| 1569 | #else |
---|
| 1570 | CALL ctl_stop( ' Kara mixed layer requested for pCO2 assimilation,', & |
---|
| 1571 | & ' but is not defined' ) |
---|
| 1572 | #endif |
---|
| 1573 | CASE ( 4 ) ! Temperature criterion (0.2 K change from surface) [T points] |
---|
| 1574 | !zmld(:,:) = hmld_tref(:,:) |
---|
| 1575 | CALL ctl_stop( ' hmld_tref mixed layer requested for pCO2 assimilation,', & |
---|
| 1576 | & ' but is not available in this version' ) |
---|
| 1577 | CASE ( 5 ) ! Density criterion (0.01 kg/m^3 change from 10m) [T points] |
---|
| 1578 | zmld(:,:) = hmlpt(:,:) |
---|
| 1579 | END SELECT |
---|
| 1580 | ENDIF |
---|
| 1581 | |
---|
| 1582 | ! Propagate through mixed layer |
---|
| 1583 | DO jj = 1, jpj |
---|
| 1584 | DO ji = 1, jpi |
---|
| 1585 | ! |
---|
| 1586 | jkmax = jpk-1 |
---|
| 1587 | DO jk = jpk-1, 1, -1 |
---|
[13191] | 1588 | #if defined key_vvl |
---|
[9296] | 1589 | IF ( ( zmld(ji,jj) > gdepw_n(ji,jj,jk) ) .AND. & |
---|
| 1590 | & ( zmld(ji,jj) <= gdepw_n(ji,jj,jk+1) ) ) THEN |
---|
| 1591 | zmld(ji,jj) = gdepw_n(ji,jj,jk+1) |
---|
| 1592 | jkmax = jk |
---|
| 1593 | ENDIF |
---|
[13191] | 1594 | #else |
---|
| 1595 | IF ( ( zmld(ji,jj) > gdepw_0(ji,jj,jk) ) .AND. & |
---|
| 1596 | & ( zmld(ji,jj) <= gdepw_0(ji,jj,jk+1) ) ) THEN |
---|
| 1597 | zmld(ji,jj) = gdepw_0(ji,jj,jk+1) |
---|
| 1598 | jkmax = jk |
---|
| 1599 | ENDIF |
---|
| 1600 | #endif |
---|
[9296] | 1601 | END DO |
---|
| 1602 | ! |
---|
| 1603 | #if defined key_top |
---|
| 1604 | DO jk = 2, jkmax |
---|
[9322] | 1605 | pco2_balinc(ji,jj,jk,:) = pco2_balinc(ji,jj,1,:) |
---|
[9296] | 1606 | END DO |
---|
| 1607 | #endif |
---|
| 1608 | ! |
---|
| 1609 | END DO |
---|
| 1610 | END DO |
---|
| 1611 | |
---|
| 1612 | ENDIF |
---|
| 1613 | |
---|
| 1614 | IF ( ll_asmiau ) THEN |
---|
| 1615 | |
---|
| 1616 | !-------------------------------------------------------------------- |
---|
| 1617 | ! Incremental Analysis Updating |
---|
| 1618 | !-------------------------------------------------------------------- |
---|
| 1619 | |
---|
| 1620 | IF ( ( kt >= nitiaustr_r ).AND.( kt <= nitiaufin_r ) ) THEN |
---|
| 1621 | |
---|
| 1622 | it = kt - nit000 + 1 |
---|
| 1623 | zincwgt = pwgtiau(it) ! IAU weight for the current time step |
---|
| 1624 | ! note this is not a tendency so should not be divided by rdt |
---|
| 1625 | |
---|
| 1626 | IF(lwp) THEN |
---|
[13191] | 1627 | WRITE(numout,*) |
---|
[9296] | 1628 | IF ( ln_spco2inc ) THEN |
---|
| 1629 | WRITE(numout,*) 'pco2_asm_inc : pco2 IAU at time step = ', & |
---|
| 1630 | & kt,' with IAU weight = ', pwgtiau(it) |
---|
| 1631 | ELSE IF ( ln_sfco2inc ) THEN |
---|
| 1632 | WRITE(numout,*) 'fco2_asm_inc : fco2 IAU at time step = ', & |
---|
| 1633 | & kt,' with IAU weight = ', pwgtiau(it) |
---|
| 1634 | ENDIF |
---|
| 1635 | WRITE(numout,*) '~~~~~~~~~~~~' |
---|
| 1636 | ENDIF |
---|
| 1637 | |
---|
| 1638 | ! Update the biogeochemical variables |
---|
| 1639 | ! Add directly to trn and trb, rather than to tra, because tra gets |
---|
| 1640 | ! reset to zero at the start of trc_stp, called after this routine |
---|
[10141] | 1641 | #if defined key_medusa |
---|
[9382] | 1642 | WHERE( pco2_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1643 | & trn(:,:,:,jp_msa0:jp_msa1) + pco2_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt > 0.0_wp ) |
---|
| 1644 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1645 | & pco2_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1646 | trb(:,:,:,jp_msa0:jp_msa1) = trb(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1647 | & pco2_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1648 | END WHERE |
---|
[9296] | 1649 | #elif defined key_hadocc |
---|
[9382] | 1650 | WHERE( pco2_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp .OR. & |
---|
| 1651 | & trn(:,:,:,jp_had0:jp_had1) + pco2_balinc(:,:,:,jp_had0:jp_had1) * zincwgt > 0.0_wp ) |
---|
| 1652 | trn(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) + & |
---|
| 1653 | & pco2_balinc(:,:,:,jp_had0:jp_had1) * zincwgt |
---|
| 1654 | trb(:,:,:,jp_had0:jp_had1) = trb(:,:,:,jp_had0:jp_had1) + & |
---|
| 1655 | & pco2_balinc(:,:,:,jp_had0:jp_had1) * zincwgt |
---|
| 1656 | END WHERE |
---|
[9296] | 1657 | #endif |
---|
| 1658 | |
---|
| 1659 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1660 | ! which is called at end of model run |
---|
| 1661 | |
---|
| 1662 | ENDIF |
---|
| 1663 | |
---|
[13191] | 1664 | ELSEIF ( ll_asmdin ) THEN |
---|
[9296] | 1665 | |
---|
| 1666 | !-------------------------------------------------------------------- |
---|
| 1667 | ! Direct Initialization |
---|
| 1668 | !-------------------------------------------------------------------- |
---|
[13191] | 1669 | |
---|
[9296] | 1670 | IF ( kt == nitdin_r ) THEN |
---|
| 1671 | |
---|
| 1672 | neuler = 0 ! Force Euler forward step |
---|
| 1673 | |
---|
| 1674 | ! Initialize the now fields with the background + increment |
---|
| 1675 | ! Background currently is what the model is initialised with |
---|
[9382] | 1676 | CALL ctl_warn( ' Doing direct initialisation with pCO2 assimilation', & |
---|
[9296] | 1677 | & ' Background state is taken from model rather than background file' ) |
---|
[10141] | 1678 | #if defined key_medusa |
---|
[9382] | 1679 | WHERE( pco2_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1680 | & trn(:,:,:,jp_msa0:jp_msa1) + pco2_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp ) |
---|
| 1681 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1682 | & pco2_balinc(:,:,:,jp_msa0:jp_msa1) |
---|
| 1683 | trb(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) |
---|
| 1684 | END WHERE |
---|
[9296] | 1685 | #elif defined key_hadocc |
---|
[9382] | 1686 | WHERE( pco2_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp .OR. & |
---|
| 1687 | & trn(:,:,:,jp_had0:jp_had1) + pco2_balinc(:,:,:,jp_had0:jp_had1) > 0.0_wp ) |
---|
| 1688 | trn(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) + & |
---|
| 1689 | & pco2_balinc(:,:,:,jp_had0:jp_had1) |
---|
| 1690 | trb(:,:,:,jp_had0:jp_had1) = trn(:,:,:,jp_had0:jp_had1) |
---|
| 1691 | END WHERE |
---|
[9296] | 1692 | #endif |
---|
[13191] | 1693 | |
---|
[9296] | 1694 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1695 | ! which is called at end of model run |
---|
| 1696 | ENDIF |
---|
| 1697 | ! |
---|
| 1698 | ENDIF |
---|
| 1699 | ! |
---|
[9322] | 1700 | END SUBROUTINE pco2_asm_inc |
---|
[9296] | 1701 | |
---|
[9297] | 1702 | !!=========================================================================== |
---|
[9322] | 1703 | !!=========================================================================== |
---|
| 1704 | !!=========================================================================== |
---|
[9296] | 1705 | |
---|
[9322] | 1706 | SUBROUTINE ph_asm_inc( kt, ll_asmdin, ll_asmiau, kcycper, pwgtiau, & |
---|
| 1707 | & ll_trainc, pt_bkginc, ps_bkginc ) |
---|
| 1708 | !!------------------------------------------------------------------------ |
---|
| 1709 | !! *** ROUTINE ph_asm_inc *** |
---|
[13191] | 1710 | !! |
---|
[9322] | 1711 | !! ** Purpose : Apply the pH assimilation increments. |
---|
| 1712 | !! |
---|
[9381] | 1713 | !! ** Method : Calculate increments to DIC and alkalinity from pH |
---|
| 1714 | !! Use a similar approach to the pCO2 scheme |
---|
[9322] | 1715 | !! Direct initialization or Incremental Analysis Updating. |
---|
| 1716 | !! |
---|
[13191] | 1717 | !! ** Action : |
---|
[9322] | 1718 | !!------------------------------------------------------------------------ |
---|
[9381] | 1719 | INTEGER, INTENT(IN) :: kt ! Current time step |
---|
| 1720 | LOGICAL, INTENT(IN) :: ll_asmdin ! Flag for direct initialisation |
---|
| 1721 | LOGICAL, INTENT(IN) :: ll_asmiau ! Flag for incremental analysis update |
---|
| 1722 | INTEGER, INTENT(IN) :: kcycper ! Dimension of pwgtiau |
---|
| 1723 | REAL(wp), DIMENSION(kcycper), INTENT(IN) :: pwgtiau ! IAU weights |
---|
| 1724 | LOGICAL, INTENT(IN) :: ll_trainc ! Flag for T/S increments |
---|
[9322] | 1725 | REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT(IN) :: pt_bkginc ! T increments |
---|
| 1726 | REAL(wp), DIMENSION(jpi,jpj,jpk), INTENT(IN) :: ps_bkginc ! S increments |
---|
[13191] | 1727 | |
---|
[9381] | 1728 | REAL(wp) :: zsearch = 10.0 ! Increment to DIC/alk in pH calculation |
---|
| 1729 | REAL(wp) :: DIC_IN, ALK_IN ! DIC/alk in pH calculation |
---|
| 1730 | REAL(wp) :: PH_OUT ! pH from pH calculation |
---|
| 1731 | REAL(wp) :: ph_bkg ! pH from pH calculation |
---|
| 1732 | REAL(wp) :: ph_dic ! pH from pH calculation |
---|
| 1733 | REAL(wp) :: ph_alk ! pH from pH calculation |
---|
| 1734 | REAL(wp) :: dph_ddic ! Change in pH wrt DIC |
---|
| 1735 | REAL(wp) :: dph_dalk ! Change in pH wrt alk |
---|
| 1736 | REAL(wp) :: weight ! Increment weighting |
---|
| 1737 | REAL(wp) :: zincwgt ! IAU weight for current time step |
---|
| 1738 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: dic_bkg_temp ! DIC background |
---|
| 1739 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: alk_bkg_temp ! Alkalinity background |
---|
| 1740 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: din_bkg_temp ! DIN background |
---|
| 1741 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: sil_bkg_temp ! Silicate background |
---|
| 1742 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: tem_bkg_temp ! Temperature background |
---|
| 1743 | REAL(wp), DIMENSION(jpi,jpj,jpk) :: sal_bkg_temp ! Salinity background |
---|
| 1744 | REAL(wp), DIMENSION(19) :: dummy_out ! Dummy variables |
---|
| 1745 | INTEGER :: ji, jj, jk, jx ! Loop counters |
---|
| 1746 | INTEGER :: it ! Index |
---|
[9322] | 1747 | !!------------------------------------------------------------------------ |
---|
[9381] | 1748 | |
---|
[10141] | 1749 | #if ! defined key_medusa |
---|
[9381] | 1750 | CALL ctl_stop( ' pH balancing only implemented for MEDUSA' ) |
---|
| 1751 | #else |
---|
| 1752 | |
---|
| 1753 | IF ( kt <= nit000 ) THEN |
---|
| 1754 | |
---|
| 1755 | !---------------------------------------------------------------------- |
---|
| 1756 | ! DIC and alkalinity balancing |
---|
| 1757 | !---------------------------------------------------------------------- |
---|
| 1758 | |
---|
| 1759 | ! Account for physics assimilation if required |
---|
| 1760 | IF ( ll_trainc ) THEN |
---|
| 1761 | tem_bkg_temp(:,:,:) = tsn(:,:,:,1) + pt_bkginc(:,:,:) |
---|
| 1762 | sal_bkg_temp(:,:,:) = tsn(:,:,:,2) + ps_bkginc(:,:,:) |
---|
| 1763 | ELSE |
---|
| 1764 | tem_bkg_temp(:,:,:) = tsn(:,:,:,1) |
---|
| 1765 | sal_bkg_temp(:,:,:) = tsn(:,:,:,2) |
---|
| 1766 | ENDIF |
---|
| 1767 | |
---|
| 1768 | ! Account for phytoplankton balancing if required |
---|
| 1769 | IF ( ln_phytobal ) THEN |
---|
[13354] | 1770 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
| 1771 | dic_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpdic) + phyto2d_balinc(:,:,:,jpdic) |
---|
| 1772 | alk_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpalk) + phyto2d_balinc(:,:,:,jpalk) |
---|
| 1773 | din_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpdin) + phyto2d_balinc(:,:,:,jpdin) |
---|
| 1774 | sil_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpsil) + phyto2d_balinc(:,:,:,jpsil) |
---|
| 1775 | ENDIF |
---|
| 1776 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
| 1777 | dic_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpdic) + phyto3d_balinc(:,:,:,jpdic) |
---|
| 1778 | alk_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpalk) + phyto3d_balinc(:,:,:,jpalk) |
---|
| 1779 | din_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpdin) + phyto3d_balinc(:,:,:,jpdin) |
---|
| 1780 | sil_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpsil) + phyto3d_balinc(:,:,:,jpsil) |
---|
| 1781 | ENDIF |
---|
[9381] | 1782 | ELSE |
---|
| 1783 | dic_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpdic) |
---|
| 1784 | alk_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpalk) |
---|
| 1785 | din_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpdin) |
---|
| 1786 | sil_bkg_temp(:,:,:) = tracer_bkg(:,:,:,jpsil) |
---|
| 1787 | ENDIF |
---|
[13191] | 1788 | |
---|
[9381] | 1789 | ! Account for pCO2 balancing if required |
---|
| 1790 | IF ( ln_sfco2inc .OR. ln_spco2inc ) THEN |
---|
| 1791 | dic_bkg_temp(:,:,:) = dic_bkg_temp(:,:,:) + pco2_balinc(:,:,:,jpdic) |
---|
| 1792 | alk_bkg_temp(:,:,:) = alk_bkg_temp(:,:,:) + pco2_balinc(:,:,:,jpalk) |
---|
| 1793 | ENDIF |
---|
[13191] | 1794 | |
---|
[9381] | 1795 | ! Loop over grid points and calculate dpH/dDIC and dpH/dAlk |
---|
| 1796 | ! This requires three calls to the MOCSY carbonate package |
---|
| 1797 | ! One to find pH at background DIC and alkalinity |
---|
| 1798 | ! One to find pH when DIC is increased by 10 |
---|
| 1799 | ! One to find pH when alkalinity is increased by 10 |
---|
| 1800 | ! Then calculate the gradients |
---|
| 1801 | |
---|
| 1802 | DO jk = 1, jpk |
---|
| 1803 | DO jj = 1, jpj |
---|
| 1804 | DO ji = 1, jpi |
---|
| 1805 | |
---|
| 1806 | IF ( pph_bkginc(ji,jj,jk) /= 0.0 ) THEN |
---|
| 1807 | |
---|
| 1808 | DO jx = 1, 3 |
---|
| 1809 | IF ( jx == 1 ) THEN |
---|
| 1810 | DIC_IN = dic_bkg_temp(ji,jj,jk) |
---|
| 1811 | ALK_IN = alk_bkg_temp(ji,jj,jk) |
---|
| 1812 | ELSE IF ( jx == 2 ) THEN |
---|
| 1813 | DIC_IN = dic_bkg_temp(ji,jj,jk) + zsearch |
---|
| 1814 | ALK_IN = alk_bkg_temp(ji,jj,jk) |
---|
| 1815 | ELSE IF ( jx == 3 ) THEN |
---|
| 1816 | DIC_IN = dic_bkg_temp(ji,jj,jk) |
---|
| 1817 | ALK_IN = alk_bkg_temp(ji,jj,jk) + zsearch |
---|
| 1818 | ENDIF |
---|
| 1819 | |
---|
| 1820 | CALL mocsy_interface(tsn(ji,jj,jk,jp_tem), & ! IN: temperature |
---|
| 1821 | & tsn(ji,jj,jk,jp_sal), & ! salinity |
---|
| 1822 | & ALK_IN, & ! alkalinity |
---|
| 1823 | & DIC_IN, & ! DIC |
---|
| 1824 | & sil_bkg_temp(ji,jj,jk), & ! silicate |
---|
| 1825 | & din_bkg_temp(ji,jj,jk)/16.0, & ! phosphate (Redfield from DIN) |
---|
| 1826 | & 1.0, & ! atmospheric pressure (dummy) |
---|
| 1827 | & fsdept(ji,jj,jk), & ! depth |
---|
| 1828 | & gphit(ji,jj), & ! latitude |
---|
| 1829 | & 1.0, & ! gas transfer (dummy) |
---|
| 1830 | & 1.0, & ! atmospheric xCO2 (dummy) |
---|
| 1831 | & 1, & ! number of points |
---|
| 1832 | & PH_OUT, & ! OUT: pH |
---|
| 1833 | & dummy_out(1), dummy_out(2), & ! stuff we don't care about |
---|
| 1834 | & dummy_out(3), dummy_out(4), & |
---|
| 1835 | & dummy_out(5), dummy_out(6), & |
---|
| 1836 | & dummy_out(7), dummy_out(8), & |
---|
| 1837 | & dummy_out(9), dummy_out(10), & |
---|
| 1838 | & dummy_out(11), dummy_out(12), & |
---|
| 1839 | & dummy_out(13), dummy_out(14), & |
---|
| 1840 | & dummy_out(15), dummy_out(16), & |
---|
| 1841 | & dummy_out(17), dummy_out(18), & |
---|
| 1842 | & dummy_out(19) ) |
---|
| 1843 | |
---|
| 1844 | IF ( jx == 1 ) THEN |
---|
| 1845 | ph_bkg = PH_OUT |
---|
| 1846 | ELSE IF ( jx == 2 ) THEN |
---|
| 1847 | ph_dic = PH_OUT |
---|
| 1848 | ELSE IF ( jx == 3 ) THEN |
---|
| 1849 | ph_alk = PH_OUT |
---|
| 1850 | ENDIF |
---|
| 1851 | END DO |
---|
| 1852 | |
---|
| 1853 | dph_ddic = (ph_dic - ph_bkg) / zsearch |
---|
| 1854 | dph_dalk = (ph_alk - ph_bkg) / zsearch |
---|
| 1855 | weight = pph_bkginc(ji,jj,jk) / ( (dph_ddic*dph_ddic) + (dph_dalk*dph_dalk) ) |
---|
| 1856 | |
---|
| 1857 | ph_balinc(ji,jj,jk,jpdic) = weight * dph_ddic |
---|
| 1858 | ph_balinc(ji,jj,jk,jpalk) = weight * dph_dalk |
---|
[13191] | 1859 | |
---|
[9381] | 1860 | ENDIF |
---|
[13191] | 1861 | |
---|
[9381] | 1862 | END DO |
---|
| 1863 | END DO |
---|
| 1864 | END DO |
---|
| 1865 | |
---|
| 1866 | ENDIF |
---|
[13191] | 1867 | |
---|
[9381] | 1868 | IF ( ll_asmiau ) THEN |
---|
| 1869 | |
---|
| 1870 | !-------------------------------------------------------------------- |
---|
| 1871 | ! Incremental Analysis Updating |
---|
| 1872 | !-------------------------------------------------------------------- |
---|
| 1873 | |
---|
| 1874 | IF ( ( kt >= nitiaustr_r ).AND.( kt <= nitiaufin_r ) ) THEN |
---|
| 1875 | |
---|
| 1876 | it = kt - nit000 + 1 |
---|
| 1877 | zincwgt = pwgtiau(it) ! IAU weight for the current time step |
---|
| 1878 | ! note this is not a tendency so should not be divided by rdt |
---|
| 1879 | |
---|
| 1880 | IF(lwp) THEN |
---|
[13191] | 1881 | WRITE(numout,*) |
---|
[9381] | 1882 | WRITE(numout,*) 'ph_asm_inc : pH IAU at time step = ', & |
---|
| 1883 | & kt,' with IAU weight = ', pwgtiau(it) |
---|
| 1884 | WRITE(numout,*) '~~~~~~~~~~~~' |
---|
| 1885 | ENDIF |
---|
| 1886 | |
---|
| 1887 | ! Update the biogeochemical variables |
---|
| 1888 | ! Add directly to trn and trb, rather than to tra, because tra gets |
---|
| 1889 | ! reset to zero at the start of trc_stp, called after this routine |
---|
[9382] | 1890 | WHERE( ph_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1891 | & trn(:,:,:,jp_msa0:jp_msa1) + ph_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt > 0.0_wp ) |
---|
| 1892 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1893 | & ph_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1894 | trb(:,:,:,jp_msa0:jp_msa1) = trb(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1895 | & ph_balinc(:,:,:,jp_msa0:jp_msa1) * zincwgt |
---|
| 1896 | END WHERE |
---|
[9381] | 1897 | |
---|
| 1898 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1899 | ! which is called at end of model run |
---|
| 1900 | |
---|
| 1901 | ENDIF |
---|
| 1902 | |
---|
[13191] | 1903 | ELSEIF ( ll_asmdin ) THEN |
---|
[9381] | 1904 | |
---|
| 1905 | !-------------------------------------------------------------------- |
---|
| 1906 | ! Direct Initialization |
---|
| 1907 | !-------------------------------------------------------------------- |
---|
[13191] | 1908 | |
---|
[9381] | 1909 | IF ( kt == nitdin_r ) THEN |
---|
| 1910 | |
---|
| 1911 | neuler = 0 ! Force Euler forward step |
---|
| 1912 | |
---|
| 1913 | ! Initialize the now fields with the background + increment |
---|
| 1914 | ! Background currently is what the model is initialised with |
---|
| 1915 | CALL ctl_warn( ' Doing direct initialisation of MEDUSA with pH assimilation', & |
---|
| 1916 | & ' Background state is taken from model rather than background file' ) |
---|
[9382] | 1917 | WHERE( ph_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp .OR. & |
---|
| 1918 | & trn(:,:,:,jp_msa0:jp_msa1) + ph_balinc(:,:,:,jp_msa0:jp_msa1) > 0.0_wp ) |
---|
| 1919 | trn(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) + & |
---|
| 1920 | & ph_balinc(:,:,:,jp_msa0:jp_msa1) |
---|
| 1921 | trb(:,:,:,jp_msa0:jp_msa1) = trn(:,:,:,jp_msa0:jp_msa1) |
---|
| 1922 | END WHERE |
---|
[13191] | 1923 | |
---|
[9381] | 1924 | ! Do not deallocate arrays - needed by asm_bgc_bal_wri |
---|
| 1925 | ! which is called at end of model run |
---|
| 1926 | ENDIF |
---|
| 1927 | ! |
---|
| 1928 | ENDIF |
---|
[13191] | 1929 | #endif |
---|
[9322] | 1930 | ! |
---|
| 1931 | END SUBROUTINE ph_asm_inc |
---|
| 1932 | |
---|
| 1933 | !!=========================================================================== |
---|
| 1934 | !!=========================================================================== |
---|
| 1935 | !!=========================================================================== |
---|
| 1936 | |
---|
| 1937 | SUBROUTINE bgc3d_asm_inc( kt, ll_asmdin, ll_asmiau, kcycper, pwgtiau ) |
---|
| 1938 | !!---------------------------------------------------------------------- |
---|
| 1939 | !! *** ROUTINE dyn_asm_inc *** |
---|
[13191] | 1940 | !! |
---|
[9322] | 1941 | !! ** Purpose : Apply generic 3D biogeochemistry assimilation increments. |
---|
| 1942 | !! |
---|
| 1943 | !! ** Method : Direct initialization or Incremental Analysis Updating. |
---|
| 1944 | !! |
---|
[13191] | 1945 | !! ** Action : |
---|
[9322] | 1946 | !!---------------------------------------------------------------------- |
---|
| 1947 | INTEGER, INTENT(IN) :: kt ! Current time step |
---|
| 1948 | LOGICAL, INTENT(IN) :: ll_asmdin ! Flag for direct initialisation |
---|
| 1949 | LOGICAL, INTENT(IN) :: ll_asmiau ! Flag for incremental analysis update |
---|
| 1950 | INTEGER, INTENT(IN) :: kcycper ! Dimension of pwgtiau |
---|
| 1951 | REAL(wp), DIMENSION(kcycper), INTENT(IN) :: pwgtiau ! IAU weights |
---|
| 1952 | ! |
---|
| 1953 | INTEGER :: jk ! Loop counter |
---|
| 1954 | INTEGER :: it ! Index |
---|
| 1955 | REAL(wp) :: zincwgt ! IAU weight for current time step |
---|
| 1956 | REAL(wp) :: zincper ! IAU interval in seconds |
---|
| 1957 | !!---------------------------------------------------------------------- |
---|
| 1958 | |
---|
[9382] | 1959 | IF ( kt <= nit000 ) THEN |
---|
| 1960 | |
---|
| 1961 | !---------------------------------------------------------------------- |
---|
| 1962 | ! Remove any other balancing increments |
---|
| 1963 | !---------------------------------------------------------------------- |
---|
| 1964 | |
---|
| 1965 | IF ( ln_pno3inc ) THEN |
---|
[10141] | 1966 | #if defined key_hadocc || defined key_medusa |
---|
[9382] | 1967 | #if defined key_hadocc |
---|
| 1968 | it = jp_had_nut |
---|
[10141] | 1969 | #elif defined key_medusa |
---|
[9382] | 1970 | it = jpdin |
---|
| 1971 | #endif |
---|
[13354] | 1972 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
[9382] | 1973 | pno3_bkginc(:,:,:) = pno3_bkginc(:,:,:) - phyto2d_balinc(:,:,:,it) |
---|
| 1974 | ENDIF |
---|
[13354] | 1975 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
[9382] | 1976 | pno3_bkginc(:,:,:) = pno3_bkginc(:,:,:) - phyto3d_balinc(:,:,:,it) |
---|
| 1977 | ENDIF |
---|
| 1978 | IF ( ln_sfco2inc .OR. ln_spco2inc ) THEN |
---|
| 1979 | pno3_bkginc(:,:,:) = pno3_bkginc(:,:,:) - pco2_balinc(:,:,:,it) |
---|
| 1980 | ENDIF |
---|
| 1981 | IF ( ln_pphinc ) THEN |
---|
| 1982 | pno3_bkginc(:,:,:) = pno3_bkginc(:,:,:) - ph_balinc(:,:,:,it) |
---|
| 1983 | ENDIF |
---|
[10057] | 1984 | #else |
---|
| 1985 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 1986 | #endif |
---|
[9382] | 1987 | ENDIF |
---|
| 1988 | |
---|
| 1989 | IF ( ln_psi4inc ) THEN |
---|
[10141] | 1990 | #if defined key_medusa |
---|
[9382] | 1991 | it = jpsil |
---|
[13354] | 1992 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
[9382] | 1993 | psi4_bkginc(:,:,:) = psi4_bkginc(:,:,:) - phyto2d_balinc(:,:,:,it) |
---|
| 1994 | ENDIF |
---|
[13354] | 1995 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
[9382] | 1996 | psi4_bkginc(:,:,:) = psi4_bkginc(:,:,:) - phyto3d_balinc(:,:,:,it) |
---|
| 1997 | ENDIF |
---|
| 1998 | IF ( ln_sfco2inc .OR. ln_spco2inc ) THEN |
---|
| 1999 | psi4_bkginc(:,:,:) = psi4_bkginc(:,:,:) - pco2_balinc(:,:,:,it) |
---|
| 2000 | ENDIF |
---|
| 2001 | IF ( ln_pphinc ) THEN |
---|
| 2002 | psi4_bkginc(:,:,:) = psi4_bkginc(:,:,:) - ph_balinc(:,:,:,it) |
---|
| 2003 | ENDIF |
---|
[10057] | 2004 | #else |
---|
| 2005 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2006 | #endif |
---|
[9382] | 2007 | ENDIF |
---|
| 2008 | |
---|
| 2009 | IF ( ln_pdicinc ) THEN |
---|
[10141] | 2010 | #if defined key_hadocc || defined key_medusa |
---|
[9382] | 2011 | #if defined key_hadocc |
---|
| 2012 | it = jp_had_dic |
---|
[10141] | 2013 | #elif defined key_medusa |
---|
[9382] | 2014 | it = jpdic |
---|
| 2015 | #endif |
---|
[13354] | 2016 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
[9382] | 2017 | pdic_bkginc(:,:,:) = pdic_bkginc(:,:,:) - phyto2d_balinc(:,:,:,it) |
---|
| 2018 | ENDIF |
---|
[13354] | 2019 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
[9382] | 2020 | pdic_bkginc(:,:,:) = pdic_bkginc(:,:,:) - phyto3d_balinc(:,:,:,it) |
---|
| 2021 | ENDIF |
---|
| 2022 | IF ( ln_sfco2inc .OR. ln_spco2inc ) THEN |
---|
| 2023 | pdic_bkginc(:,:,:) = pdic_bkginc(:,:,:) - pco2_balinc(:,:,:,it) |
---|
| 2024 | ENDIF |
---|
| 2025 | IF ( ln_pphinc ) THEN |
---|
| 2026 | pdic_bkginc(:,:,:) = pdic_bkginc(:,:,:) - ph_balinc(:,:,:,it) |
---|
| 2027 | ENDIF |
---|
[10057] | 2028 | #else |
---|
| 2029 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2030 | #endif |
---|
[9382] | 2031 | ENDIF |
---|
| 2032 | |
---|
| 2033 | IF ( ln_palkinc ) THEN |
---|
[10141] | 2034 | #if defined key_hadocc || defined key_medusa |
---|
[9382] | 2035 | #if defined key_hadocc |
---|
| 2036 | it = jp_had_alk |
---|
[10141] | 2037 | #elif defined key_medusa |
---|
[9382] | 2038 | it = jpalk |
---|
| 2039 | #endif |
---|
[13354] | 2040 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
[9382] | 2041 | palk_bkginc(:,:,:) = palk_bkginc(:,:,:) - phyto2d_balinc(:,:,:,it) |
---|
| 2042 | ENDIF |
---|
[13354] | 2043 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
[9382] | 2044 | palk_bkginc(:,:,:) = palk_bkginc(:,:,:) - phyto3d_balinc(:,:,:,it) |
---|
| 2045 | ENDIF |
---|
| 2046 | IF ( ln_sfco2inc .OR. ln_spco2inc ) THEN |
---|
| 2047 | palk_bkginc(:,:,:) = palk_bkginc(:,:,:) - pco2_balinc(:,:,:,it) |
---|
| 2048 | ENDIF |
---|
| 2049 | IF ( ln_pphinc ) THEN |
---|
| 2050 | palk_bkginc(:,:,:) = palk_bkginc(:,:,:) - ph_balinc(:,:,:,it) |
---|
| 2051 | ENDIF |
---|
[10057] | 2052 | #else |
---|
| 2053 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2054 | #endif |
---|
[9382] | 2055 | ENDIF |
---|
| 2056 | |
---|
| 2057 | IF ( ln_po2inc ) THEN |
---|
[10141] | 2058 | #if defined key_medusa |
---|
[9382] | 2059 | it = jpoxy |
---|
[13354] | 2060 | IF ( ALLOCATED(phyto2d_balinc) ) THEN |
---|
[9382] | 2061 | po2_bkginc(:,:,:) = po2_bkginc(:,:,:) - phyto2d_balinc(:,:,:,it) |
---|
| 2062 | ENDIF |
---|
[13354] | 2063 | IF ( ALLOCATED(phyto3d_balinc) ) THEN |
---|
[9382] | 2064 | po2_bkginc(:,:,:) = po2_bkginc(:,:,:) - phyto3d_balinc(:,:,:,it) |
---|
| 2065 | ENDIF |
---|
| 2066 | IF ( ln_sfco2inc .OR. ln_spco2inc ) THEN |
---|
| 2067 | po2_bkginc(:,:,:) = po2_bkginc(:,:,:) - pco2_balinc(:,:,:,it) |
---|
| 2068 | ENDIF |
---|
| 2069 | IF ( ln_pphinc ) THEN |
---|
| 2070 | po2_bkginc(:,:,:) = po2_bkginc(:,:,:) - ph_balinc(:,:,:,it) |
---|
| 2071 | ENDIF |
---|
[10057] | 2072 | #else |
---|
| 2073 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2074 | #endif |
---|
[9382] | 2075 | ENDIF |
---|
| 2076 | |
---|
| 2077 | ENDIF |
---|
| 2078 | |
---|
[9322] | 2079 | IF ( ll_asmiau ) THEN |
---|
| 2080 | |
---|
| 2081 | !-------------------------------------------------------------------- |
---|
| 2082 | ! Incremental Analysis Updating |
---|
| 2083 | !-------------------------------------------------------------------- |
---|
| 2084 | |
---|
| 2085 | IF ( ( kt >= nitiaustr_r ).AND.( kt <= nitiaufin_r ) ) THEN |
---|
| 2086 | |
---|
| 2087 | it = kt - nit000 + 1 |
---|
[9326] | 2088 | zincwgt = pwgtiau(it) ! IAU weight for the current time step |
---|
| 2089 | ! note this is not a tendency so should not be divided by rdt |
---|
[9322] | 2090 | |
---|
| 2091 | IF(lwp) THEN |
---|
[13191] | 2092 | WRITE(numout,*) |
---|
[9322] | 2093 | WRITE(numout,*) 'bgc3d_asm_inc : 3D BGC IAU at time step = ', & |
---|
| 2094 | & kt,' with IAU weight = ', pwgtiau(it) |
---|
| 2095 | WRITE(numout,*) '~~~~~~~~~~~~' |
---|
| 2096 | ENDIF |
---|
| 2097 | |
---|
| 2098 | ! Update the 3D BGC variables |
---|
| 2099 | ! Add directly to trn and trb, rather than to tra, because tra gets |
---|
| 2100 | ! reset to zero at the start of trc_stp, called after this routine |
---|
| 2101 | ! Don't apply increments if they'll take concentrations negative |
---|
| 2102 | |
---|
| 2103 | IF ( ln_pno3inc ) THEN |
---|
| 2104 | #if defined key_hadocc |
---|
| 2105 | WHERE( pno3_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2106 | & trn(:,:,:,jp_had_nut) + pno3_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2107 | trn(:,:,:,jp_had_nut) = trn(:,:,:,jp_had_nut) + pno3_bkginc(:,:,:) * zincwgt |
---|
| 2108 | trb(:,:,:,jp_had_nut) = trb(:,:,:,jp_had_nut) + pno3_bkginc(:,:,:) * zincwgt |
---|
| 2109 | END WHERE |
---|
[10141] | 2110 | #elif defined key_medusa |
---|
[9322] | 2111 | WHERE( pno3_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2112 | & trn(:,:,:,jpdin) + pno3_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2113 | trn(:,:,:,jpdin) = trn(:,:,:,jpdin) + pno3_bkginc(:,:,:) * zincwgt |
---|
| 2114 | trb(:,:,:,jpdin) = trb(:,:,:,jpdin) + pno3_bkginc(:,:,:) * zincwgt |
---|
| 2115 | END WHERE |
---|
| 2116 | #else |
---|
| 2117 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2118 | #endif |
---|
| 2119 | ENDIF |
---|
| 2120 | |
---|
| 2121 | IF ( ln_psi4inc ) THEN |
---|
[10141] | 2122 | #if defined key_medusa |
---|
[9322] | 2123 | WHERE( psi4_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2124 | & trn(:,:,:,jpsil) + psi4_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2125 | trn(:,:,:,jpsil) = trn(:,:,:,jpsil) + psi4_bkginc(:,:,:) * zincwgt |
---|
| 2126 | trb(:,:,:,jpsil) = trb(:,:,:,jpsil) + psi4_bkginc(:,:,:) * zincwgt |
---|
| 2127 | END WHERE |
---|
| 2128 | #else |
---|
| 2129 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2130 | #endif |
---|
| 2131 | ENDIF |
---|
| 2132 | |
---|
| 2133 | IF ( ln_pdicinc ) THEN |
---|
| 2134 | #if defined key_hadocc |
---|
| 2135 | WHERE( pdic_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2136 | & trn(:,:,:,jp_had_dic) + pdic_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2137 | trn(:,:,:,jp_had_dic) = trn(:,:,:,jp_had_dic) + pdic_bkginc(:,:,:) * zincwgt |
---|
| 2138 | trb(:,:,:,jp_had_dic) = trb(:,:,:,jp_had_dic) + pdic_bkginc(:,:,:) * zincwgt |
---|
| 2139 | END WHERE |
---|
[10141] | 2140 | #elif defined key_medusa |
---|
[9322] | 2141 | WHERE( pdic_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2142 | & trn(:,:,:,jpdic) + pdic_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2143 | trn(:,:,:,jpdic) = trn(:,:,:,jpdic) + pdic_bkginc(:,:,:) * zincwgt |
---|
| 2144 | trb(:,:,:,jpdic) = trb(:,:,:,jpdic) + pdic_bkginc(:,:,:) * zincwgt |
---|
| 2145 | END WHERE |
---|
| 2146 | #else |
---|
| 2147 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2148 | #endif |
---|
| 2149 | ENDIF |
---|
| 2150 | |
---|
| 2151 | IF ( ln_palkinc ) THEN |
---|
| 2152 | #if defined key_hadocc |
---|
| 2153 | WHERE( palk_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2154 | & trn(:,:,:,jp_had_alk) + palk_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2155 | trn(:,:,:,jp_had_alk) = trn(:,:,:,jp_had_alk) + palk_bkginc(:,:,:) * zincwgt |
---|
| 2156 | trb(:,:,:,jp_had_alk) = trb(:,:,:,jp_had_alk) + palk_bkginc(:,:,:) * zincwgt |
---|
| 2157 | END WHERE |
---|
[10141] | 2158 | #elif defined key_medusa |
---|
[9322] | 2159 | WHERE( palk_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2160 | & trn(:,:,:,jpalk) + palk_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2161 | trn(:,:,:,jpalk) = trn(:,:,:,jpalk) + palk_bkginc(:,:,:) * zincwgt |
---|
| 2162 | trb(:,:,:,jpalk) = trb(:,:,:,jpalk) + palk_bkginc(:,:,:) * zincwgt |
---|
| 2163 | END WHERE |
---|
| 2164 | #else |
---|
| 2165 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2166 | #endif |
---|
| 2167 | ENDIF |
---|
| 2168 | |
---|
| 2169 | IF ( ln_po2inc ) THEN |
---|
[10141] | 2170 | #if defined key_medusa |
---|
[9322] | 2171 | WHERE( po2_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2172 | & trn(:,:,:,jpoxy) + po2_bkginc(:,:,:) * zincwgt > 0.0_wp ) |
---|
| 2173 | trn(:,:,:,jpoxy) = trn(:,:,:,jpoxy) + po2_bkginc(:,:,:) * zincwgt |
---|
| 2174 | trb(:,:,:,jpoxy) = trb(:,:,:,jpoxy) + po2_bkginc(:,:,:) * zincwgt |
---|
| 2175 | END WHERE |
---|
| 2176 | #else |
---|
| 2177 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2178 | #endif |
---|
| 2179 | ENDIF |
---|
[13191] | 2180 | |
---|
[9322] | 2181 | IF ( kt == nitiaufin_r ) THEN |
---|
| 2182 | IF ( ln_pno3inc ) DEALLOCATE( pno3_bkginc ) |
---|
| 2183 | IF ( ln_psi4inc ) DEALLOCATE( psi4_bkginc ) |
---|
| 2184 | IF ( ln_pdicinc ) DEALLOCATE( pdic_bkginc ) |
---|
| 2185 | IF ( ln_palkinc ) DEALLOCATE( palk_bkginc ) |
---|
| 2186 | IF ( ln_po2inc ) DEALLOCATE( po2_bkginc ) |
---|
| 2187 | ENDIF |
---|
| 2188 | |
---|
| 2189 | ENDIF |
---|
| 2190 | |
---|
[13191] | 2191 | ELSEIF ( ll_asmdin ) THEN |
---|
[9322] | 2192 | |
---|
| 2193 | !-------------------------------------------------------------------- |
---|
| 2194 | ! Direct Initialization |
---|
| 2195 | !-------------------------------------------------------------------- |
---|
[13191] | 2196 | |
---|
[9322] | 2197 | IF ( kt == nitdin_r ) THEN |
---|
| 2198 | |
---|
| 2199 | neuler = 0 ! Force Euler forward step |
---|
| 2200 | |
---|
| 2201 | ! Initialize the now fields with the background + increment |
---|
| 2202 | ! Background currently is what the model is initialised with |
---|
| 2203 | #if defined key_hadocc |
---|
| 2204 | CALL ctl_warn( ' Doing direct initialisation of HadOCC with 3D BGC assimilation', & |
---|
| 2205 | & ' Background state is taken from model rather than background file' ) |
---|
[10141] | 2206 | #elif defined key_medusa |
---|
[9322] | 2207 | CALL ctl_warn( ' Doing direct initialisation of MEDUSA with 3D BGC assimilation', & |
---|
| 2208 | & ' Background state is taken from model rather than background file' ) |
---|
| 2209 | #endif |
---|
| 2210 | |
---|
| 2211 | IF ( ln_pno3inc ) THEN |
---|
| 2212 | #if defined key_hadocc |
---|
| 2213 | WHERE( pno3_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2214 | & trn(:,:,:,jp_had_nut) + pno3_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2215 | trn(:,:,:,jp_had_nut) = trn(:,:,:,jp_had_nut) + pno3_bkginc(:,:,:) |
---|
| 2216 | trb(:,:,:,jp_had_nut) = trn(:,:,:,jp_had_nut) |
---|
| 2217 | END WHERE |
---|
[10141] | 2218 | #elif defined key_medusa |
---|
[9322] | 2219 | WHERE( pno3_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2220 | & trn(:,:,:,jpdin) + pno3_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2221 | trn(:,:,:,jpdin) = trn(:,:,:,jpdin) + pno3_bkginc(:,:,:) |
---|
| 2222 | trb(:,:,:,jpdin) = trn(:,:,:,jpdin) |
---|
| 2223 | END WHERE |
---|
| 2224 | #else |
---|
| 2225 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2226 | #endif |
---|
| 2227 | ENDIF |
---|
| 2228 | |
---|
| 2229 | IF ( ln_psi4inc ) THEN |
---|
[10141] | 2230 | #if defined key_medusa |
---|
[9322] | 2231 | WHERE( psi4_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2232 | & trn(:,:,:,jpsil) + psi4_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2233 | trn(:,:,:,jpsil) = trn(:,:,:,jpsil) + psi4_bkginc(:,:,:) |
---|
| 2234 | trb(:,:,:,jpsil) = trn(:,:,:,jpsil) |
---|
| 2235 | END WHERE |
---|
| 2236 | #else |
---|
| 2237 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2238 | #endif |
---|
| 2239 | ENDIF |
---|
| 2240 | |
---|
| 2241 | IF ( ln_pdicinc ) THEN |
---|
| 2242 | #if defined key_hadocc |
---|
| 2243 | WHERE( pdic_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2244 | & trn(:,:,:,jp_had_dic) + pdic_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2245 | trn(:,:,:,jp_had_dic) = trn(:,:,:,jp_had_dic) + pdic_bkginc(:,:,:) |
---|
| 2246 | trb(:,:,:,jp_had_dic) = trn(:,:,:,jp_had_dic) |
---|
| 2247 | END WHERE |
---|
[10141] | 2248 | #elif defined key_medusa |
---|
[9322] | 2249 | WHERE( pdic_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2250 | & trn(:,:,:,jpdic) + pdic_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2251 | trn(:,:,:,jpdic) = trn(:,:,:,jpdic) + pdic_bkginc(:,:,:) |
---|
| 2252 | trb(:,:,:,jpdic) = trn(:,:,:,jpdic) |
---|
| 2253 | END WHERE |
---|
| 2254 | #else |
---|
| 2255 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2256 | #endif |
---|
| 2257 | ENDIF |
---|
| 2258 | |
---|
| 2259 | IF ( ln_palkinc ) THEN |
---|
| 2260 | #if defined key_hadocc |
---|
| 2261 | WHERE( palk_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2262 | & trn(:,:,:,jp_had_alk) + palk_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2263 | trn(:,:,:,jp_had_alk) = trn(:,:,:,jp_had_alk) + palk_bkginc(:,:,:) |
---|
| 2264 | trb(:,:,:,jp_had_alk) = trn(:,:,:,jp_had_alk) |
---|
| 2265 | END WHERE |
---|
[10141] | 2266 | #elif defined key_medusa |
---|
[9322] | 2267 | WHERE( palk_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2268 | & trn(:,:,:,jpalk) + palk_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2269 | trn(:,:,:,jpalk) = trn(:,:,:,jpalk) + palk_bkginc(:,:,:) |
---|
| 2270 | trb(:,:,:,jpalk) = trn(:,:,:,jpalk) |
---|
| 2271 | END WHERE |
---|
| 2272 | #else |
---|
| 2273 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2274 | #endif |
---|
| 2275 | ENDIF |
---|
| 2276 | |
---|
| 2277 | IF ( ln_po2inc ) THEN |
---|
[10141] | 2278 | #if defined key_medusa |
---|
[9322] | 2279 | WHERE( po2_bkginc(:,:,:) > 0.0_wp .OR. & |
---|
| 2280 | & trn(:,:,:,jpoxy) + po2_bkginc(:,:,:) > 0.0_wp ) |
---|
| 2281 | trn(:,:,:,jpoxy) = trn(:,:,:,jpoxy) + po2_bkginc(:,:,:) |
---|
| 2282 | trb(:,:,:,jpoxy) = trn(:,:,:,jpoxy) |
---|
| 2283 | END WHERE |
---|
| 2284 | #else |
---|
| 2285 | CALL ctl_stop ( ' bgc3d_asm_inc: no compatible BGC model defined' ) |
---|
| 2286 | #endif |
---|
| 2287 | ENDIF |
---|
[13191] | 2288 | |
---|
[9322] | 2289 | IF ( ln_pno3inc ) DEALLOCATE( pno3_bkginc ) |
---|
| 2290 | IF ( ln_psi4inc ) DEALLOCATE( psi4_bkginc ) |
---|
| 2291 | IF ( ln_pdicinc ) DEALLOCATE( pdic_bkginc ) |
---|
| 2292 | IF ( ln_palkinc ) DEALLOCATE( palk_bkginc ) |
---|
| 2293 | IF ( ln_po2inc ) DEALLOCATE( po2_bkginc ) |
---|
| 2294 | ENDIF |
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| 2295 | ! |
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| 2296 | ENDIF |
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| 2297 | ! |
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| 2298 | END SUBROUTINE bgc3d_asm_inc |
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| 2299 | |
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| 2300 | !!=========================================================================== |
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| 2301 | |
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[9296] | 2302 | END MODULE asmbgc |
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