1 | MODULE bio_medusa_fin_mod |
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2 | !!====================================================================== |
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3 | !! *** MODULE bio_medusa_fin_mod *** |
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4 | !! Finalisation for TRC_BIO_MEDUSA |
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5 | !!====================================================================== |
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6 | !! History : |
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7 | !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 |
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8 | !!---------------------------------------------------------------------- |
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9 | #if defined key_medusa |
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10 | !!---------------------------------------------------------------------- |
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11 | !! MEDUSA bio-model |
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12 | !!---------------------------------------------------------------------- |
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13 | |
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14 | IMPLICIT NONE |
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15 | PRIVATE |
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16 | |
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17 | PUBLIC bio_medusa_fin ! Called in trcbio_medusa.F90 |
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18 | |
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19 | !!---------------------------------------------------------------------- |
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20 | !! NEMO/TOP 2.0 , LOCEAN-IPSL (2007) |
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21 | !! $Id$ |
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22 | !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) |
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23 | !!---------------------------------------------------------------------- |
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24 | |
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25 | CONTAINS |
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26 | |
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27 | SUBROUTINE bio_medusa_fin( kt ) |
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28 | !!--------------------------------------------------------------------- |
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29 | !! *** ROUTINE bio_medusa_fin *** |
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30 | !! This called from TRC_BIO_MEDUSA and |
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31 | !! - ... |
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32 | !!---------------------------------------------------------------------- |
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33 | USE bio_medusa_mod |
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34 | USE dom_oce, ONLY: atfp, atfp1, neuler, rdt, e3t_n, tmask |
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35 | USE in_out_manager, ONLY: lwp, numout |
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36 | # if defined key_iomput |
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37 | USE iom, ONLY: iom_put, lk_iomput |
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38 | # endif |
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39 | USE lbclnk, ONLY: lbc_lnk |
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40 | USE par_medusa, ONLY: jp_medusa_2d, jp_medusa_3d, & |
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41 | jp_medusa_trd |
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42 | USE par_oce, ONLY: jpi, jpim1, jpj, jpjm1, jpk |
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43 | USE phycst, ONLY: rsmall |
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44 | USE sms_medusa, ONLY: jinorgben, jorgben, & |
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45 | f3_co3, f3_h2co3, f3_hco3, & |
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46 | f3_omarg, f3_omcal, f3_pH, & |
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47 | za_sed_c, za_sed_ca, za_sed_fe, & |
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48 | za_sed_n, za_sed_si, & |
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49 | zb_sed_c, zb_sed_ca, zb_sed_fe, & |
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50 | zb_sed_n, zb_sed_si, & |
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51 | zn_sed_c, zn_sed_ca, zn_sed_fe, & |
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52 | zn_sed_n, zn_sed_si |
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53 | USE trc, ONLY: ctrc2d, ctrc3d, ln_diatrc, & |
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54 | med_diag, nittrc000, & |
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55 | trbio, trc2d, trc3d |
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56 | USE trcnam_trp, ONLY: ln_trcadv_cen2, ln_trcadv_tvd |
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57 | |
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58 | !! time (integer timestep) |
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59 | INTEGER, INTENT( in ) :: kt |
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60 | |
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61 | INTEGER :: ji, jj |
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62 | INTEGER :: jn |
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63 | |
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64 | REAL(wp) :: fq0,fq1,fq2,fq3 |
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65 | |
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66 | !!---------------------------------------------------------------------- |
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67 | !! Process benthic in/out fluxes |
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68 | !! These can be handled outside of the 3D calculations since the |
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69 | !! benthic pools (and fluxes) are 2D in nature; this code is |
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70 | !! (shamelessly) borrowed from corresponding code in the LOBSTER |
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71 | !! model |
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72 | !!---------------------------------------------------------------------- |
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73 | !! |
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74 | !! IF(lwp) WRITE(numout,*) 'AXY: rdt = ', rdt |
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75 | if (jorgben.eq.1) then |
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76 | za_sed_n(:,:) = zn_sed_n(:,:) + & |
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77 | ( f_sbenin_n(:,:) + f_fbenin_n(:,:) - & |
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78 | f_benout_n(:,:) ) * (rdt / 86400.) |
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79 | zn_sed_n(:,:) = za_sed_n(:,:) |
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80 | !! |
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81 | za_sed_fe(:,:) = zn_sed_fe(:,:) + & |
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82 | ( f_sbenin_fe(:,:) + f_fbenin_fe(:,:) - & |
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83 | f_benout_fe(:,:) ) * (rdt / 86400.) |
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84 | zn_sed_fe(:,:) = za_sed_fe(:,:) |
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85 | !! |
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86 | za_sed_c(:,:) = zn_sed_c(:,:) + & |
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87 | ( f_sbenin_c(:,:) + f_fbenin_c(:,:) - & |
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88 | f_benout_c(:,:) ) * (rdt / 86400.) |
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89 | zn_sed_c(:,:) = za_sed_c(:,:) |
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90 | endif |
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91 | if (jinorgben.eq.1) then |
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92 | za_sed_si(:,:) = zn_sed_si(:,:) + & |
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93 | ( f_fbenin_si(:,:) - f_benout_si(:,:) ) * & |
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94 | (rdt / 86400.) |
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95 | zn_sed_si(:,:) = za_sed_si(:,:) |
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96 | !! |
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97 | za_sed_ca(:,:) = zn_sed_ca(:,:) + & |
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98 | ( f_fbenin_ca(:,:) - f_benout_ca(:,:) ) * & |
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99 | (rdt / 86400.) |
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100 | zn_sed_ca(:,:) = za_sed_ca(:,:) |
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101 | endif |
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102 | IF( ln_diatrc ) THEN |
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103 | DO jj = 2,jpjm1 |
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104 | DO ji = 2,jpim1 |
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105 | trc2d(ji,jj,131) = za_sed_n(ji,jj) |
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106 | trc2d(ji,jj,132) = za_sed_fe(ji,jj) |
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107 | trc2d(ji,jj,133) = za_sed_c(ji,jj) |
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108 | trc2d(ji,jj,134) = za_sed_si(ji,jj) |
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109 | trc2d(ji,jj,135) = za_sed_ca(ji,jj) |
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110 | ENDDO |
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111 | ENDDO |
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112 | !! AXY (07/07/15): temporary hijacking |
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113 | # if defined key_roam |
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114 | !! trc2d(:,:,126) = zn_dms_chn(:,:) |
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115 | !! trc2d(:,:,127) = zn_dms_chd(:,:) |
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116 | !! trc2d(:,:,128) = zn_dms_mld(:,:) |
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117 | !! trc2d(:,:,129) = zn_dms_qsr(:,:) |
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118 | !! trc2d(:,:,130) = zn_dms_din(:,:) |
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119 | # endif |
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120 | ENDIF |
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121 | !! |
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122 | if (ibenthic.eq.2) then |
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123 | !! The code below (in this if ... then ... endif loop) is |
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124 | !! effectively commented out because it does not work as |
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125 | !! anticipated; it can be deleted at a later date |
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126 | if (jorgben.eq.1) then |
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127 | za_sed_n(:,:) = ( f_sbenin_n(:,:) + f_fbenin_n(:,:) - & |
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128 | f_benout_n(:,:) ) * rdt |
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129 | za_sed_fe(:,:) = ( f_sbenin_fe(:,:) + f_fbenin_fe(:,:) - & |
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130 | f_benout_fe(:,:) ) * rdt |
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131 | za_sed_c(:,:) = ( f_sbenin_c(:,:) + f_fbenin_c(:,:) - & |
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132 | f_benout_c(:,:) ) * rdt |
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133 | endif |
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134 | if (jinorgben.eq.1) then |
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135 | za_sed_si(:,:) = ( f_fbenin_si(:,:) - f_benout_si(:,:) ) * rdt |
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136 | za_sed_ca(:,:) = ( f_fbenin_ca(:,:) - f_benout_ca(:,:) ) * rdt |
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137 | endif |
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138 | !! |
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139 | !! Leap-frog scheme - only in explicit case, otherwise the |
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140 | !! time stepping is already being done in trczdf |
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141 | !! IF( l_trczdf_exp .AND. (ln_trcadv_cen2 .OR. ln_trcadv_tvd) ) THEN |
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142 | !! zfact = 2. * rdttra(jk) * FLOAT( ndttrc ) |
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143 | !! IF( neuler == 0 .AND. kt == nittrc000 ) zfact = rdttra(jk) * |
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144 | !! FLOAT(ndttrc) |
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145 | !! if (jorgben.eq.1) then |
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146 | !! za_sed_n(:,:) = zb_sed_n(:,:) + ( zfact * za_sed_n(:,:) ) |
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147 | !! za_sed_fe(:,:) = zb_sed_fe(:,:) + ( zfact * za_sed_fe(:,:) ) |
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148 | !! za_sed_c(:,:) = zb_sed_c(:,:) + ( zfact * za_sed_c(:,:) ) |
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149 | !! endif |
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150 | !! if (jinorgben.eq.1) then |
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151 | !! za_sed_si(:,:) = zb_sed_si(:,:) + ( zfact * za_sed_si(:,:) ) |
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152 | !! za_sed_ca(:,:) = zb_sed_ca(:,:) + ( zfact * za_sed_ca(:,:) ) |
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153 | !! endif |
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154 | !! ENDIF |
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155 | !! |
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156 | !! Time filter and swap of arrays |
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157 | IF( ln_trcadv_cen2 .OR. ln_trcadv_tvd ) THEN ! centred or tvd scheme |
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158 | IF( neuler == 0 .AND. kt == nittrc000 ) THEN |
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159 | if (jorgben.eq.1) then |
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160 | zb_sed_n(:,:) = zn_sed_n(:,:) |
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161 | zn_sed_n(:,:) = za_sed_n(:,:) |
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162 | za_sed_n(:,:) = 0.0 |
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163 | !! |
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164 | zb_sed_fe(:,:) = zn_sed_fe(:,:) |
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165 | zn_sed_fe(:,:) = za_sed_fe(:,:) |
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166 | za_sed_fe(:,:) = 0.0 |
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167 | !! |
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168 | zb_sed_c(:,:) = zn_sed_c(:,:) |
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169 | zn_sed_c(:,:) = za_sed_c(:,:) |
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170 | za_sed_c(:,:) = 0.0 |
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171 | endif |
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172 | if (jinorgben.eq.1) then |
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173 | zb_sed_si(:,:) = zn_sed_si(:,:) |
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174 | zn_sed_si(:,:) = za_sed_si(:,:) |
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175 | za_sed_si(:,:) = 0.0 |
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176 | !! |
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177 | zb_sed_ca(:,:) = zn_sed_ca(:,:) |
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178 | zn_sed_ca(:,:) = za_sed_ca(:,:) |
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179 | za_sed_ca(:,:) = 0.0 |
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180 | endif |
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181 | ELSE |
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182 | if (jorgben.eq.1) then |
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183 | zb_sed_n(:,:) = (atfp * & |
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184 | ( zb_sed_n(:,:) + za_sed_n(:,:) )) + & |
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185 | (atfp1 * zn_sed_n(:,:) ) |
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186 | zn_sed_n(:,:) = za_sed_n(:,:) |
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187 | za_sed_n(:,:) = 0.0 |
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188 | !! |
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189 | zb_sed_fe(:,:) = (atfp * & |
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190 | ( zb_sed_fe(:,:) + za_sed_fe(:,:) )) + & |
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191 | (atfp1 * zn_sed_fe(:,:)) |
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192 | zn_sed_fe(:,:) = za_sed_fe(:,:) |
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193 | za_sed_fe(:,:) = 0.0 |
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194 | !! |
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195 | zb_sed_c(:,:) = (atfp * & |
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196 | ( zb_sed_c(:,:) + za_sed_c(:,:) )) + & |
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197 | (atfp1 * zn_sed_c(:,:) ) |
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198 | zn_sed_c(:,:) = za_sed_c(:,:) |
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199 | za_sed_c(:,:) = 0.0 |
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200 | endif |
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201 | if (jinorgben.eq.1) then |
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202 | zb_sed_si(:,:) = (atfp * & |
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203 | ( zb_sed_si(:,:) + za_sed_si(:,:) )) + & |
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204 | (atfp1 * zn_sed_si(:,:)) |
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205 | zn_sed_si(:,:) = za_sed_si(:,:) |
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206 | za_sed_si(:,:) = 0.0 |
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207 | !! |
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208 | zb_sed_ca(:,:) = (atfp * & |
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209 | ( zb_sed_ca(:,:) + za_sed_ca(:,:) )) + & |
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210 | (atfp1 * zn_sed_ca(:,:)) |
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211 | zn_sed_ca(:,:) = za_sed_ca(:,:) |
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212 | za_sed_ca(:,:) = 0.0 |
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213 | endif |
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214 | ENDIF |
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215 | ELSE ! case of smolar scheme or muscl |
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216 | if (jorgben.eq.1) then |
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217 | zb_sed_n(:,:) = za_sed_n(:,:) |
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218 | zn_sed_n(:,:) = za_sed_n(:,:) |
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219 | za_sed_n(:,:) = 0.0 |
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220 | !! |
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221 | zb_sed_fe(:,:) = za_sed_fe(:,:) |
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222 | zn_sed_fe(:,:) = za_sed_fe(:,:) |
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223 | za_sed_fe(:,:) = 0.0 |
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224 | !! |
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225 | zb_sed_c(:,:) = za_sed_c(:,:) |
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226 | zn_sed_c(:,:) = za_sed_c(:,:) |
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227 | za_sed_c(:,:) = 0.0 |
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228 | endif |
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229 | if (jinorgben.eq.1) then |
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230 | zb_sed_si(:,:) = za_sed_si(:,:) |
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231 | zn_sed_si(:,:) = za_sed_si(:,:) |
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232 | za_sed_si(:,:) = 0.0 |
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233 | !! |
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234 | zb_sed_ca(:,:) = za_sed_ca(:,:) |
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235 | zn_sed_ca(:,:) = za_sed_ca(:,:) |
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236 | za_sed_ca(:,:) = 0.0 |
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237 | endif |
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238 | ENDIF |
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239 | endif |
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240 | |
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241 | # if defined key_debug_medusa |
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242 | !! AXY (12/07/17) |
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243 | !!----------------------------------------------------------------- |
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244 | !! Check conservation of MEDUSA's sinks-minus-sources using fflx_X |
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245 | !! diagnostics (i.e. biogeochemical processes only) |
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246 | !! - fflx_X diagnostics *should* include all transfers between |
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247 | !! modelled components |
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248 | !! - they should also include gains / losses due to air-sea |
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249 | !! fluxes of C and O2, aeolian and seafloor inputs of Fe, and |
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250 | !! inputs from seafloor "benthic buckets" (N, Si, Fe, C and |
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251 | !! alkalinity) |
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252 | !! - however, they do not include the transfer of material to |
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253 | !! "benthic buckets" by sedimenting slow- and fast-sinking |
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254 | !! detritus since these are separate 2D reservoirs |
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255 | !! - consequently, for a given water column, the integrated |
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256 | !! fluxes should sum to the "loss" of material to the "benthic |
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257 | !! buckets" |
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258 | !! - if they do not, this suggests that MEDUSA contains errors |
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259 | !! in its accounting (e.g. processes omitted from calculated |
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260 | !! fluxes) |
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261 | !! - here, the local integrated fluxes and benthic inputs (plus |
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262 | !! air-sea fluxes in the case of C) are reported together with |
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263 | !! the resulting error |
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264 | !! - only N, Si, C and alkalinity inventories considered; Fe and |
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265 | !! O2 overlooked because of wholesale loss (and addition, in |
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266 | !! the case of O2) of these tracers within the water column |
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267 | !!----------------------------------------------------------------- |
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268 | !! |
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269 | !! nitrogen |
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270 | DO jj = 2,jpjm1 |
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271 | DO ji = 2,jpim1 |
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272 | if (tmask(ji,jj,1) == 1) then |
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273 | fq0 = fflx_n(ji,jj) |
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274 | fq1 = f_sbenin_n(ji,jj) + f_fbenin_n(ji,jj) |
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275 | fq2 = fq0 + fq1 |
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276 | IF (lwp) write (numout,'(a,2i3,a,3f15.10)') & |
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277 | 'AXY N cons: (i,j)=',ji,jj,', (flx,ben,err)=', & |
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278 | fq0,fq1,fq2 |
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279 | ENDIF |
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280 | ENDDO |
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281 | ENDDO |
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282 | !! silicon |
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283 | DO jj = 2,jpjm1 |
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284 | DO ji = 2,jpim1 |
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285 | if (tmask(ji,jj,1) == 1) then |
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286 | fq0 = fflx_si(ji,jj) |
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287 | fq1 = f_fbenin_si(ji,jj) |
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288 | fq2 = fq0 + fq1 |
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289 | IF (lwp) write (numout,'(a,2i3,a,3f15.10)') & |
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290 | 'AXY Si cons: (i,j)=',ji,jj,', (flx,ben,err)=', & |
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291 | fq0,fq1,fq2 |
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292 | ENDIF |
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293 | ENDDO |
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294 | ENDDO |
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295 | !! carbon |
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296 | DO jj = 2,jpjm1 |
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297 | DO ji = 2,jpim1 |
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298 | if (tmask(ji,jj,1) == 1) then |
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299 | fq0 = fflx_c(ji,jj) |
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300 | fq1 = f_sbenin_c(ji,jj) + f_fbenin_c(ji,jj) + f_fbenin_ca(ji,jj) |
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301 | fq2 = f_co2flux(ji,jj) * e3t_n(ji,jj,1) |
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302 | fq3 = fq0 + fq1 |
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303 | IF (lwp) write (numout,'(a,2i3,a,4f15.10)') & |
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304 | 'AXY C cons: (i,j)=',ji,jj,', (flx,ben,asf,err)=', & |
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305 | fq0,fq1,fq2,fq3 |
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306 | ENDIF |
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307 | ENDDO |
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308 | ENDDO |
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309 | !! alkalinity |
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310 | DO jj = 2,jpjm1 |
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311 | DO ji = 2,jpim1 |
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312 | if (tmask(ji,jj,1) == 1) then |
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313 | fq0 = fflx_a(ji,jj) |
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314 | fq1 = 2.0 * f_fbenin_ca(ji,jj) |
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315 | fq2 = fq0 + fq1 |
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316 | IF (lwp) write (numout,'(a,2i3,a,3f15.10)') & |
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317 | 'AXY alk cons: (i,j)=',ji,jj,', (flx,ben,err)=', & |
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318 | fq0,fq1,fq2 |
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319 | ENDIF |
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320 | ENDDO |
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321 | ENDDO |
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322 | # endif |
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323 | |
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324 | IF( ln_diatrc ) THEN |
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325 | !!----------------------------------------------------------------- |
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326 | !! Output several accumulated diagnostics |
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327 | !! - biomass-average phytoplankton limitation terms |
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328 | !! - integrated tendency terms |
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329 | !!----------------------------------------------------------------- |
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330 | !! |
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331 | DO jj = 2,jpjm1 |
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332 | DO ji = 2,jpim1 |
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333 | !! non-diatom phytoplankton limitations |
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334 | trc2d(ji,jj,25) = trc2d(ji,jj,25) / MAX(ftot_pn(ji,jj), rsmall) |
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335 | trc2d(ji,jj,26) = trc2d(ji,jj,26) / MAX(ftot_pn(ji,jj), rsmall) |
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336 | trc2d(ji,jj,27) = trc2d(ji,jj,27) / MAX(ftot_pn(ji,jj), rsmall) |
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337 | !! diatom phytoplankton limitations |
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338 | trc2d(ji,jj,28) = trc2d(ji,jj,28) / MAX(ftot_pd(ji,jj), rsmall) |
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339 | trc2d(ji,jj,29) = trc2d(ji,jj,29) / MAX(ftot_pd(ji,jj), rsmall) |
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340 | trc2d(ji,jj,30) = trc2d(ji,jj,30) / MAX(ftot_pd(ji,jj), rsmall) |
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341 | trc2d(ji,jj,31) = trc2d(ji,jj,31) / MAX(ftot_pd(ji,jj), rsmall) |
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342 | trc2d(ji,jj,32) = trc2d(ji,jj,32) / MAX(ftot_pd(ji,jj), rsmall) |
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343 | !! tendency terms |
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344 | trc2d(ji,jj,76) = fflx_n(ji,jj) |
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345 | trc2d(ji,jj,77) = fflx_si(ji,jj) |
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346 | trc2d(ji,jj,78) = fflx_fe(ji,jj) |
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347 | !! Integrated biomass. |
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348 | !! integrated non-diatom phytoplankton |
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349 | trc2d(ji,jj,79) = ftot_pn(ji,jj) |
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350 | !! integrated diatom phytoplankton |
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351 | trc2d(ji,jj,80) = ftot_pd(ji,jj) |
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352 | !! Integrated microzooplankton |
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353 | trc2d(ji,jj,217) = ftot_zmi(ji,jj) |
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354 | !! Integrated mesozooplankton |
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355 | trc2d(ji,jj,218) = ftot_zme(ji,jj) |
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356 | !! Integrated slow detritus, nitrogen |
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357 | trc2d(ji,jj,219) = ftot_det(ji,jj) |
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358 | !! Integrated slow detritus, carbon |
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359 | trc2d(ji,jj,220) = ftot_dtc(ji,jj) |
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360 | # if defined key_roam |
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361 | !! The balance of nitrogen production/consumption. |
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362 | !! integrated nitrogen production |
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363 | trc2d(ji,jj,111) = fnit_prod(ji,jj) |
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364 | !! integrated nitrogen consumption |
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365 | trc2d(ji,jj,112) = fnit_cons(ji,jj) |
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366 | !! The balance of carbon production/consumption. |
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367 | !! integrated carbon production |
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368 | trc2d(ji,jj,113) = fcar_prod(ji,jj) |
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369 | !! integrated carbon consumption |
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370 | trc2d(ji,jj,114) = fcar_cons(ji,jj) |
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371 | !! The balance of oxygen production/consumption. |
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372 | !! integrated oxygen production |
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373 | trc2d(ji,jj,115) = foxy_prod(ji,jj) |
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374 | !! integrated oxygen consumption |
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375 | trc2d(ji,jj,116) = foxy_cons(ji,jj) |
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376 | !! integrated unrealised oxygen consumption |
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377 | trc2d(ji,jj,117) = foxy_anox(ji,jj) |
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378 | # endif |
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379 | ENDDO |
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380 | ENDDO |
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381 | |
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382 | # if defined key_roam |
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383 | # if defined key_axy_nancheck |
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384 | !!--------------------------------------------------------------- |
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385 | !! Check for NaNs in diagnostic outputs |
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386 | !!--------------------------------------------------------------- |
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387 | !! |
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388 | !! 2D diagnostics |
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389 | DO jn = 1,150 |
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390 | fq0 = SUM(trc2d(:,:,jn)) |
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391 | !! AXY (30/01/14): "isnan" problem on HECTOR |
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392 | !! if (fq0 /= fq0 ) then |
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393 | if ( ieee_is_nan( fq0 ) ) then |
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394 | !! there's a NaN here |
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395 | if (lwp) write(numout,*) & |
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396 | 'NAN detected in 2D diagnostic field', jn, 'at time', & |
---|
397 | kt, 'at position:' |
---|
398 | DO jj = 1,jpj |
---|
399 | DO ji = 1,jpi |
---|
400 | if ( ieee_is_nan( trc2d(ji,jj,jn) ) ) then |
---|
401 | if (lwp) write (numout,'(a,3i6)') 'NAN-CHECK', & |
---|
402 | ji, jj, jn |
---|
403 | endif |
---|
404 | ENDDO |
---|
405 | ENDDO |
---|
406 | CALL ctl_stop( 'trcbio_medusa, NAN in 2D diagnostic field' ) |
---|
407 | endif |
---|
408 | ENDDO |
---|
409 | !! |
---|
410 | !! 3D diagnostics |
---|
411 | DO jn = 1,5 |
---|
412 | fq0 = SUM(trc3d(:,:,:,jn)) |
---|
413 | !! AXY (30/01/14): "isnan" problem on HECTOR |
---|
414 | !! if (fq0 /= fq0 ) then |
---|
415 | if ( ieee_is_nan( fq0 ) ) then |
---|
416 | !! there's a NaN here |
---|
417 | if (lwp) write(numout,*) & |
---|
418 | 'NAN detected in 3D diagnostic field', jn, 'at time', & |
---|
419 | kt, 'at position:' |
---|
420 | DO jk = 1,jpk |
---|
421 | DO jj = 1,jpj |
---|
422 | DO ji = 1,jpi |
---|
423 | if ( ieee_is_nan( trc3d(ji,jj,jk,jn) ) ) then |
---|
424 | if (lwp) write (numout,'(a,4i6)') 'NAN-CHECK', & |
---|
425 | ji, jj, jk, jn |
---|
426 | endif |
---|
427 | ENDDO |
---|
428 | ENDDO |
---|
429 | ENDDO |
---|
430 | CALL ctl_stop( 'trcbio_medusa, NAN in 3D diagnostic field' ) |
---|
431 | endif |
---|
432 | ENDDO |
---|
433 | CALL flush(numout) |
---|
434 | # endif |
---|
435 | # endif |
---|
436 | |
---|
437 | !!---------------------------------------------------------------- |
---|
438 | !! Don't know what this does; belongs to someone else ... |
---|
439 | !!---------------------------------------------------------------- |
---|
440 | !! |
---|
441 | !! Lateral boundary conditions on trc2d |
---|
442 | DO jn=1,jp_medusa_2d |
---|
443 | CALL lbc_lnk(trc2d(:,:,jn),'T',1. ) |
---|
444 | ENDDO |
---|
445 | |
---|
446 | !! Lateral boundary conditions on trc3d |
---|
447 | DO jn=1,jp_medusa_3d |
---|
448 | CALL lbc_lnk(trc3d(:,:,1,jn),'T',1. ) |
---|
449 | ENDDO |
---|
450 | |
---|
451 | |
---|
452 | # if defined key_axy_nodiag |
---|
453 | !!---------------------------------------------------------------- |
---|
454 | !! Blank diagnostics as a NaN-trap |
---|
455 | !!---------------------------------------------------------------- |
---|
456 | !! |
---|
457 | !! blank 2D diagnostic array |
---|
458 | trc2d(:,:,:) = 0.e0 |
---|
459 | !! |
---|
460 | !! blank 3D diagnostic array |
---|
461 | trc3d(:,:,:,:) = 0.e0 |
---|
462 | # endif |
---|
463 | |
---|
464 | |
---|
465 | !!---------------------------------------------------------------- |
---|
466 | !! Add in XML diagnostics stuff |
---|
467 | !!---------------------------------------------------------------- |
---|
468 | !! |
---|
469 | !! ** 2D diagnostics |
---|
470 | DO jn=1,jp_medusa_2d |
---|
471 | CALL iom_put(TRIM(ctrc2d(jn)), trc2d(:,:,jn)) |
---|
472 | END DO |
---|
473 | !! AXY (17/02/14): don't think I need this if I modify the above for |
---|
474 | !! all diagnostics |
---|
475 | !! # if defined key_roam |
---|
476 | !! DO jn=91,jp_medusa_2d |
---|
477 | !! CALL iom_put(TRIM(ctrc2d(jn)), trc2d(:,:,jn)) |
---|
478 | !! END DO |
---|
479 | !! # endif |
---|
480 | !! |
---|
481 | !! ** 3D diagnostics |
---|
482 | DO jn=1,jp_medusa_3d |
---|
483 | CALL iom_put(TRIM(ctrc3d(jn)), trc3d(:,:,:,jn)) |
---|
484 | END DO |
---|
485 | !! AXY (17/02/14): don't think I need this if I modify the above for |
---|
486 | !! all diagnostics |
---|
487 | !! # if defined key_roam |
---|
488 | !! CALL iom_put(TRIM(ctrc3d(5)), trc3d(:,:,:,5)) |
---|
489 | !! # endif |
---|
490 | |
---|
491 | |
---|
492 | ELSE IF( lk_iomput .AND. .NOT. ln_diatrc ) THEN |
---|
493 | !!!--------------------------------------------------------------- |
---|
494 | !! Add very last diag calculations |
---|
495 | !!!--------------------------------------------------------------- |
---|
496 | DO jj = 2,jpjm1 |
---|
497 | DO ji = 2,jpim1 |
---|
498 | !! |
---|
499 | IF( med_diag%PN_JLIM%dgsave ) THEN |
---|
500 | fjln2d(ji,jj) = fjln2d(ji,jj) / MAX(ftot_pn(ji,jj), rsmall) |
---|
501 | ENDIF |
---|
502 | IF( med_diag%PN_NLIM%dgsave ) THEN |
---|
503 | fnln2d(ji,jj) = fnln2d(ji,jj) / MAX(ftot_pn(ji,jj), rsmall) |
---|
504 | ENDIF |
---|
505 | IF( med_diag%PN_FELIM%dgsave ) THEN |
---|
506 | ffln2d(ji,jj) = ffln2d(ji,jj) / MAX(ftot_pn(ji,jj), rsmall) |
---|
507 | ENDIF |
---|
508 | IF( med_diag%PD_JLIM%dgsave ) THEN |
---|
509 | fjld2d(ji,jj) = fjld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) |
---|
510 | ENDIF |
---|
511 | IF( med_diag%PD_NLIM%dgsave ) THEN |
---|
512 | fnld2d(ji,jj) = fnld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) |
---|
513 | ENDIF |
---|
514 | IF( med_diag%PD_FELIM%dgsave ) THEN |
---|
515 | ffld2d(ji,jj) = ffld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) |
---|
516 | ENDIF |
---|
517 | IF( med_diag%PD_SILIM%dgsave ) THEN |
---|
518 | fsld2d2(ji,jj) = fsld2d2(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) |
---|
519 | ENDIF |
---|
520 | IF( med_diag%PDSILIM2%dgsave ) THEN |
---|
521 | fsld2d(ji,jj) = fsld2d(ji,jj) / MAX(ftot_pd(ji,jj), rsmall) |
---|
522 | ENDIF |
---|
523 | ENDDO |
---|
524 | ENDDO |
---|
525 | !!---------------------------------------------------------------- |
---|
526 | !! Add in XML diagnostics stuff |
---|
527 | !!---------------------------------------------------------------- |
---|
528 | !! |
---|
529 | !! ** 2D diagnostics |
---|
530 | # if defined key_debug_medusa |
---|
531 | IF (lwp) write (numout,*) 'trc_bio_medusa: export all diag.' |
---|
532 | CALL flush(numout) |
---|
533 | # endif |
---|
534 | IF ( med_diag%INVTN%dgsave ) THEN |
---|
535 | CALL iom_put( "INVTN" , ftot_n ) |
---|
536 | ENDIF |
---|
537 | IF ( med_diag%INVTSI%dgsave ) THEN |
---|
538 | CALL iom_put( "INVTSI" , ftot_si ) |
---|
539 | ENDIF |
---|
540 | IF ( med_diag%INVTFE%dgsave ) THEN |
---|
541 | CALL iom_put( "INVTFE" , ftot_fe ) |
---|
542 | ENDIF |
---|
543 | IF ( med_diag%ML_PRN%dgsave ) THEN |
---|
544 | CALL iom_put( "ML_PRN" , fprn_ml ) |
---|
545 | ENDIF |
---|
546 | IF ( med_diag%ML_PRD%dgsave ) THEN |
---|
547 | CALL iom_put( "ML_PRD" , fprd_ml ) |
---|
548 | ENDIF |
---|
549 | IF ( med_diag%OCAL_LVL%dgsave ) THEN |
---|
550 | CALL iom_put( "OCAL_LVL" , fccd ) |
---|
551 | ENDIF |
---|
552 | IF ( med_diag%PN_JLIM%dgsave ) THEN |
---|
553 | CALL iom_put( "PN_JLIM" , fjln2d ) |
---|
554 | DEALLOCATE( fjln2d ) |
---|
555 | ENDIF |
---|
556 | IF ( med_diag%PN_NLIM%dgsave ) THEN |
---|
557 | CALL iom_put( "PN_NLIM" , fnln2d ) |
---|
558 | DEALLOCATE( fnln2d ) |
---|
559 | ENDIF |
---|
560 | IF ( med_diag%PN_FELIM%dgsave ) THEN |
---|
561 | CALL iom_put( "PN_FELIM" , ffln2d ) |
---|
562 | DEALLOCATE( ffln2d ) |
---|
563 | ENDIF |
---|
564 | IF ( med_diag%PD_JLIM%dgsave ) THEN |
---|
565 | CALL iom_put( "PD_JLIM" , fjld2d ) |
---|
566 | DEALLOCATE( fjld2d ) |
---|
567 | ENDIF |
---|
568 | IF ( med_diag%PD_NLIM%dgsave ) THEN |
---|
569 | CALL iom_put( "PD_NLIM" , fnld2d ) |
---|
570 | DEALLOCATE( fnld2d ) |
---|
571 | ENDIF |
---|
572 | IF ( med_diag%PD_FELIM%dgsave ) THEN |
---|
573 | CALL iom_put( "PD_FELIM" , ffld2d ) |
---|
574 | DEALLOCATE( ffld2d ) |
---|
575 | ENDIF |
---|
576 | IF ( med_diag%PD_SILIM%dgsave ) THEN |
---|
577 | CALL iom_put( "PD_SILIM" , fsld2d2 ) |
---|
578 | DEALLOCATE( fsld2d2 ) |
---|
579 | ENDIF |
---|
580 | IF ( med_diag%PDSILIM2%dgsave ) THEN |
---|
581 | CALL iom_put( "PDSILIM2" , fsld2d ) |
---|
582 | DEALLOCATE( fsld2d ) |
---|
583 | ENDIF |
---|
584 | IF ( med_diag%INTFLX_N%dgsave ) THEN |
---|
585 | CALL iom_put( "INTFLX_N" , fflx_n ) |
---|
586 | ENDIF |
---|
587 | IF ( med_diag%INTFLX_SI%dgsave ) THEN |
---|
588 | CALL iom_put( "INTFLX_SI" , fflx_si ) |
---|
589 | ENDIF |
---|
590 | IF ( med_diag%INTFLX_FE%dgsave ) THEN |
---|
591 | CALL iom_put( "INTFLX_FE" , fflx_fe ) |
---|
592 | ENDIF |
---|
593 | IF ( med_diag%INT_PN%dgsave ) THEN |
---|
594 | CALL iom_put( "INT_PN" , ftot_pn ) |
---|
595 | ENDIF |
---|
596 | IF ( med_diag%INT_PD%dgsave ) THEN |
---|
597 | CALL iom_put( "INT_PD" , ftot_pd ) |
---|
598 | ENDIF |
---|
599 | IF ( med_diag%INT_ZMI%dgsave ) THEN |
---|
600 | CALL iom_put( "INT_ZMI" , ftot_zmi ) |
---|
601 | ENDIF |
---|
602 | IF ( med_diag%INT_ZME%dgsave ) THEN |
---|
603 | CALL iom_put( "INT_ZME" , ftot_zme ) |
---|
604 | ENDIF |
---|
605 | IF ( med_diag%INT_DET%dgsave ) THEN |
---|
606 | CALL iom_put( "INT_DET" , ftot_det ) |
---|
607 | ENDIF |
---|
608 | IF ( med_diag%INT_DTC%dgsave ) THEN |
---|
609 | CALL iom_put( "INT_DTC" , ftot_dtc ) |
---|
610 | ENDIF |
---|
611 | IF ( med_diag%BEN_N%dgsave ) THEN |
---|
612 | CALL iom_put( "BEN_N" , za_sed_n ) |
---|
613 | ENDIF |
---|
614 | IF ( med_diag%BEN_FE%dgsave ) THEN |
---|
615 | CALL iom_put( "BEN_FE" , za_sed_fe ) |
---|
616 | ENDIF |
---|
617 | IF ( med_diag%BEN_C%dgsave ) THEN |
---|
618 | CALL iom_put( "BEN_C" , za_sed_c ) |
---|
619 | ENDIF |
---|
620 | IF ( med_diag%BEN_SI%dgsave ) THEN |
---|
621 | CALL iom_put( "BEN_SI" , za_sed_si ) |
---|
622 | ENDIF |
---|
623 | IF ( med_diag%BEN_CA%dgsave ) THEN |
---|
624 | CALL iom_put( "BEN_CA" , za_sed_ca ) |
---|
625 | ENDIF |
---|
626 | IF ( med_diag%RUNOFF%dgsave ) THEN |
---|
627 | CALL iom_put( "RUNOFF" , f_runoff ) |
---|
628 | ENDIF |
---|
629 | # if defined key_roam |
---|
630 | IF ( med_diag%N_PROD%dgsave ) THEN |
---|
631 | CALL iom_put( "N_PROD" , fnit_prod ) |
---|
632 | ENDIF |
---|
633 | IF ( med_diag%N_CONS%dgsave ) THEN |
---|
634 | CALL iom_put( "N_CONS" , fnit_cons ) |
---|
635 | ENDIF |
---|
636 | IF ( med_diag%C_PROD%dgsave ) THEN |
---|
637 | CALL iom_put( "C_PROD" , fcar_prod ) |
---|
638 | ENDIF |
---|
639 | IF ( med_diag%C_CONS%dgsave ) THEN |
---|
640 | CALL iom_put( "C_CONS" , fcar_cons ) |
---|
641 | ENDIF |
---|
642 | IF ( med_diag%O2_PROD%dgsave ) THEN |
---|
643 | CALL iom_put( "O2_PROD" , foxy_prod ) |
---|
644 | ENDIF |
---|
645 | IF ( med_diag%O2_CONS%dgsave ) THEN |
---|
646 | CALL iom_put( "O2_CONS" , foxy_cons ) |
---|
647 | ENDIF |
---|
648 | IF ( med_diag%O2_ANOX%dgsave ) THEN |
---|
649 | CALL iom_put( "O2_ANOX" , foxy_anox ) |
---|
650 | ENDIF |
---|
651 | IF ( med_diag%INVTC%dgsave ) THEN |
---|
652 | CALL iom_put( "INVTC" , ftot_c ) |
---|
653 | ENDIF |
---|
654 | IF ( med_diag%INVTALK%dgsave ) THEN |
---|
655 | CALL iom_put( "INVTALK" , ftot_a ) |
---|
656 | ENDIF |
---|
657 | IF ( med_diag%INVTO2%dgsave ) THEN |
---|
658 | CALL iom_put( "INVTO2" , ftot_o2 ) |
---|
659 | ENDIF |
---|
660 | IF ( med_diag%COM_RESP%dgsave ) THEN |
---|
661 | CALL iom_put( "COM_RESP" , fcomm_resp ) |
---|
662 | ENDIF |
---|
663 | # endif |
---|
664 | !! |
---|
665 | !! diagnostic filled in the i-j-k main loop |
---|
666 | !!-------------------------------------------- |
---|
667 | IF ( med_diag%PRN%dgsave ) THEN |
---|
668 | CALL iom_put( "PRN" , fprn2d ) |
---|
669 | DEALLOCATE( fprn2d ) |
---|
670 | ENDIF |
---|
671 | IF ( med_diag%MPN%dgsave ) THEN |
---|
672 | CALL iom_put( "MPN" ,fdpn2d ) |
---|
673 | DEALLOCATE( fdpn2d ) |
---|
674 | ENDIF |
---|
675 | IF ( med_diag%PRD%dgsave ) THEN |
---|
676 | CALL iom_put( "PRD" ,fprd2d ) |
---|
677 | DEALLOCATE( fprd2d ) |
---|
678 | ENDIF |
---|
679 | IF( med_diag%MPD%dgsave ) THEN |
---|
680 | CALL iom_put( "MPD" , fdpd2d ) |
---|
681 | DEALLOCATE( fdpd2d ) |
---|
682 | ENDIF |
---|
683 | ! IF( med_diag%DSED%dgsave ) THEN |
---|
684 | ! CALL iom_put( "DSED" , ftot_n ) |
---|
685 | ! ENDIF |
---|
686 | IF( med_diag%OPAL%dgsave ) THEN |
---|
687 | CALL iom_put( "OPAL" , fprds2d ) |
---|
688 | DEALLOCATE( fprds2d ) |
---|
689 | ENDIF |
---|
690 | IF( med_diag%OPALDISS%dgsave ) THEN |
---|
691 | CALL iom_put( "OPALDISS" , fsdiss2d ) |
---|
692 | DEALLOCATE( fsdiss2d ) |
---|
693 | ENDIF |
---|
694 | IF( med_diag%GMIPn%dgsave ) THEN |
---|
695 | CALL iom_put( "GMIPn" , fgmipn2d ) |
---|
696 | DEALLOCATE( fgmipn2d ) |
---|
697 | ENDIF |
---|
698 | IF( med_diag%GMID%dgsave ) THEN |
---|
699 | CALL iom_put( "GMID" , fgmid2d ) |
---|
700 | DEALLOCATE( fgmid2d ) |
---|
701 | ENDIF |
---|
702 | IF( med_diag%MZMI%dgsave ) THEN |
---|
703 | CALL iom_put( "MZMI" , fdzmi2d ) |
---|
704 | DEALLOCATE( fdzmi2d ) |
---|
705 | ENDIF |
---|
706 | IF( med_diag%GMEPN%dgsave ) THEN |
---|
707 | CALL iom_put( "GMEPN" , fgmepn2d ) |
---|
708 | DEALLOCATE( fgmepn2d ) |
---|
709 | ENDIF |
---|
710 | IF( med_diag%GMEPD%dgsave ) THEN |
---|
711 | CALL iom_put( "GMEPD" , fgmepd2d ) |
---|
712 | DEALLOCATE( fgmepd2d ) |
---|
713 | ENDIF |
---|
714 | IF( med_diag%GMEZMI%dgsave ) THEN |
---|
715 | CALL iom_put( "GMEZMI" , fgmezmi2d ) |
---|
716 | DEALLOCATE( fgmezmi2d ) |
---|
717 | ENDIF |
---|
718 | IF( med_diag%GMED%dgsave ) THEN |
---|
719 | CALL iom_put( "GMED" , fgmed2d ) |
---|
720 | DEALLOCATE( fgmed2d ) |
---|
721 | ENDIF |
---|
722 | IF( med_diag%MZME%dgsave ) THEN |
---|
723 | CALL iom_put( "MZME" , fdzme2d ) |
---|
724 | DEALLOCATE( fdzme2d ) |
---|
725 | ENDIF |
---|
726 | ! IF( med_diag%DEXP%dgsave ) THEN |
---|
727 | ! CALL iom_put( "DEXP" , ftot_n ) |
---|
728 | ! ENDIF |
---|
729 | IF( med_diag%DETN%dgsave ) THEN |
---|
730 | CALL iom_put( "DETN" , fslown2d ) |
---|
731 | DEALLOCATE( fslown2d ) |
---|
732 | ENDIF |
---|
733 | IF( med_diag%MDET%dgsave ) THEN |
---|
734 | CALL iom_put( "MDET" , fdd2d ) |
---|
735 | DEALLOCATE( fdd2d ) |
---|
736 | ENDIF |
---|
737 | IF( med_diag%AEOLIAN%dgsave ) THEN |
---|
738 | CALL iom_put( "AEOLIAN" , ffetop2d ) |
---|
739 | DEALLOCATE( ffetop2d ) |
---|
740 | ENDIF |
---|
741 | IF( med_diag%BENTHIC%dgsave ) THEN |
---|
742 | CALL iom_put( "BENTHIC" , ffebot2d ) |
---|
743 | DEALLOCATE( ffebot2d ) |
---|
744 | ENDIF |
---|
745 | IF( med_diag%SCAVENGE%dgsave ) THEN |
---|
746 | CALL iom_put( "SCAVENGE" , ffescav2d ) |
---|
747 | DEALLOCATE( ffescav2d ) |
---|
748 | ENDIF |
---|
749 | !! |
---|
750 | IF( med_diag%TOTREG_N%dgsave ) THEN |
---|
751 | CALL iom_put( "TOTREG_N" , fregen2d ) |
---|
752 | DEALLOCATE( fregen2d ) |
---|
753 | ENDIF |
---|
754 | IF( med_diag%TOTRG_SI%dgsave ) THEN |
---|
755 | CALL iom_put( "TOTRG_SI" , fregensi2d ) |
---|
756 | DEALLOCATE( fregensi2d ) |
---|
757 | ENDIF |
---|
758 | !! |
---|
759 | IF( med_diag%FASTN%dgsave ) THEN |
---|
760 | CALL iom_put( "FASTN" , ftempn2d ) |
---|
761 | DEALLOCATE( ftempn2d ) |
---|
762 | ENDIF |
---|
763 | IF( med_diag%FASTSI%dgsave ) THEN |
---|
764 | CALL iom_put( "FASTSI" , ftempsi2d ) |
---|
765 | DEALLOCATE( ftempsi2d ) |
---|
766 | ENDIF |
---|
767 | IF( med_diag%FASTFE%dgsave ) THEN |
---|
768 | CALL iom_put( "FASTFE" , ftempfe2d ) |
---|
769 | DEALLOCATE( ftempfe2d ) |
---|
770 | ENDIF |
---|
771 | IF( med_diag%FASTC%dgsave ) THEN |
---|
772 | CALL iom_put( "FASTC" , ftempc2d ) |
---|
773 | DEALLOCATE( ftempc2d ) |
---|
774 | ENDIF |
---|
775 | IF( med_diag%FASTCA%dgsave ) THEN |
---|
776 | CALL iom_put( "FASTCA" , ftempca2d ) |
---|
777 | DEALLOCATE( ftempca2d ) |
---|
778 | ENDIF |
---|
779 | !! |
---|
780 | IF( med_diag%REMINN%dgsave ) THEN |
---|
781 | CALL iom_put( "REMINN" , freminn2d ) |
---|
782 | DEALLOCATE( freminn2d ) |
---|
783 | ENDIF |
---|
784 | IF( med_diag%REMINSI%dgsave ) THEN |
---|
785 | CALL iom_put( "REMINSI" , freminsi2d ) |
---|
786 | DEALLOCATE( freminsi2d ) |
---|
787 | ENDIF |
---|
788 | IF( med_diag%REMINFE%dgsave ) THEN |
---|
789 | CALL iom_put( "REMINFE" , freminfe2d ) |
---|
790 | DEALLOCATE( freminfe2d ) |
---|
791 | ENDIF |
---|
792 | IF( med_diag%REMINC%dgsave ) THEN |
---|
793 | CALL iom_put( "REMINC" , freminc2d ) |
---|
794 | DEALLOCATE( freminc2d ) |
---|
795 | ENDIF |
---|
796 | IF( med_diag%REMINCA%dgsave ) THEN |
---|
797 | CALL iom_put( "REMINCA" , freminca2d ) |
---|
798 | DEALLOCATE( freminca2d ) |
---|
799 | ENDIF |
---|
800 | IF( med_diag%SEAFLRN%dgsave ) THEN |
---|
801 | CALL iom_put( "SEAFLRN" , fsedn ) |
---|
802 | ENDIF |
---|
803 | IF( med_diag%SEAFLRSI%dgsave ) THEN |
---|
804 | CALL iom_put( "SEAFLRSI" , fsedsi ) |
---|
805 | ENDIF |
---|
806 | IF( med_diag%SEAFLRFE%dgsave ) THEN |
---|
807 | CALL iom_put( "SEAFLRFE" , fsedfe ) |
---|
808 | ENDIF |
---|
809 | IF( med_diag%SEAFLRC%dgsave ) THEN |
---|
810 | CALL iom_put( "SEAFLRC" , fsedc ) |
---|
811 | ENDIF |
---|
812 | IF( med_diag%SEAFLRCA%dgsave ) THEN |
---|
813 | CALL iom_put( "SEAFLRCA" , fsedca ) |
---|
814 | ENDIF |
---|
815 | !! |
---|
816 | # if defined key_roam |
---|
817 | !! |
---|
818 | IF( med_diag%RIV_N%dgsave ) THEN |
---|
819 | CALL iom_put( "RIV_N" , rivn2d ) |
---|
820 | DEALLOCATE( rivn2d ) |
---|
821 | ENDIF |
---|
822 | IF( med_diag%RIV_SI%dgsave ) THEN |
---|
823 | CALL iom_put( "RIV_SI" , rivsi2d ) |
---|
824 | DEALLOCATE( rivsi2d ) |
---|
825 | ENDIF |
---|
826 | IF( med_diag%RIV_C%dgsave ) THEN |
---|
827 | CALL iom_put( "RIV_C" , rivc2d ) |
---|
828 | DEALLOCATE( rivc2d ) |
---|
829 | ENDIF |
---|
830 | IF( med_diag%RIV_ALK%dgsave ) THEN |
---|
831 | CALL iom_put( "RIV_ALK" , rivalk2d ) |
---|
832 | DEALLOCATE( rivalk2d ) |
---|
833 | ENDIF |
---|
834 | IF( med_diag%DETC%dgsave ) THEN |
---|
835 | CALL iom_put( "DETC" , fslowc2d ) |
---|
836 | DEALLOCATE( fslowc2d ) |
---|
837 | ENDIF |
---|
838 | !! |
---|
839 | IF( med_diag%PN_LLOSS%dgsave ) THEN |
---|
840 | CALL iom_put( "PN_LLOSS" , fdpn22d ) |
---|
841 | DEALLOCATE( fdpn22d ) |
---|
842 | ENDIF |
---|
843 | IF( med_diag%PD_LLOSS%dgsave ) THEN |
---|
844 | CALL iom_put( "PD_LLOSS" , fdpd22d ) |
---|
845 | DEALLOCATE( fdpd22d ) |
---|
846 | ENDIF |
---|
847 | IF( med_diag%ZI_LLOSS%dgsave ) THEN |
---|
848 | CALL iom_put( "ZI_LLOSS" , fdzmi22d ) |
---|
849 | DEALLOCATE( fdzmi22d ) |
---|
850 | ENDIF |
---|
851 | IF( med_diag%ZE_LLOSS%dgsave ) THEN |
---|
852 | CALL iom_put( "ZE_LLOSS" , fdzme22d ) |
---|
853 | DEALLOCATE( fdzme22d ) |
---|
854 | ENDIF |
---|
855 | IF( med_diag%ZI_MES_N%dgsave ) THEN |
---|
856 | CALL iom_put( "ZI_MES_N" , zimesn2d ) |
---|
857 | DEALLOCATE( zimesn2d ) |
---|
858 | ENDIF |
---|
859 | IF( med_diag%ZI_MES_D%dgsave ) THEN |
---|
860 | CALL iom_put( "ZI_MES_D" , zimesd2d ) |
---|
861 | DEALLOCATE( zimesd2d ) |
---|
862 | ENDIF |
---|
863 | IF( med_diag%ZI_MES_C%dgsave ) THEN |
---|
864 | CALL iom_put( "ZI_MES_C" , zimesc2d ) |
---|
865 | DEALLOCATE( zimesc2d ) |
---|
866 | ENDIF |
---|
867 | IF( med_diag%ZI_MESDC%dgsave ) THEN |
---|
868 | CALL iom_put( "ZI_MESDC" ,zimesdc2d ) |
---|
869 | DEALLOCATE( zimesdc2d ) |
---|
870 | ENDIF |
---|
871 | IF( med_diag%ZI_EXCR%dgsave ) THEN |
---|
872 | CALL iom_put( "ZI_EXCR" , ziexcr2d ) |
---|
873 | DEALLOCATE( ziexcr2d ) |
---|
874 | ENDIF |
---|
875 | IF( med_diag%ZI_RESP%dgsave ) THEN |
---|
876 | CALL iom_put( "ZI_RESP" , ziresp2d ) |
---|
877 | DEALLOCATE( ziresp2d ) |
---|
878 | ENDIF |
---|
879 | IF( med_diag%ZI_GROW%dgsave ) THEN |
---|
880 | CALL iom_put( "ZI_GROW" , zigrow2d ) |
---|
881 | DEALLOCATE( zigrow2d ) |
---|
882 | ENDIF |
---|
883 | IF( med_diag%ZE_MES_N%dgsave ) THEN |
---|
884 | CALL iom_put( "ZE_MES_N" , zemesn2d ) |
---|
885 | DEALLOCATE( zemesn2d ) |
---|
886 | ENDIF |
---|
887 | IF( med_diag%ZE_MES_D%dgsave ) THEN |
---|
888 | CALL iom_put( "ZE_MES_D" , zemesd2d ) |
---|
889 | DEALLOCATE( zemesd2d ) |
---|
890 | ENDIF |
---|
891 | IF( med_diag%ZE_MES_C%dgsave ) THEN |
---|
892 | CALL iom_put( "ZE_MES_C" , zemesc2d ) |
---|
893 | DEALLOCATE( zemesc2d ) |
---|
894 | ENDIF |
---|
895 | IF( med_diag%ZE_MESDC%dgsave ) THEN |
---|
896 | CALL iom_put( "ZE_MESDC" , zemesdc2d ) |
---|
897 | DEALLOCATE( zemesdc2d ) |
---|
898 | ENDIF |
---|
899 | IF( med_diag%ZE_EXCR%dgsave ) THEN |
---|
900 | CALL iom_put( "ZE_EXCR" , zeexcr2d ) |
---|
901 | DEALLOCATE( zeexcr2d ) |
---|
902 | ENDIF |
---|
903 | IF( med_diag%ZE_RESP%dgsave ) THEN |
---|
904 | CALL iom_put( "ZE_RESP" , zeresp2d ) |
---|
905 | DEALLOCATE( zeresp2d ) |
---|
906 | ENDIF |
---|
907 | IF( med_diag%ZE_GROW%dgsave ) THEN |
---|
908 | CALL iom_put( "ZE_GROW" , zegrow2d ) |
---|
909 | DEALLOCATE( zegrow2d ) |
---|
910 | ENDIF |
---|
911 | IF( med_diag%MDETC%dgsave ) THEN |
---|
912 | CALL iom_put( "MDETC" , mdetc2d ) |
---|
913 | DEALLOCATE( mdetc2d ) |
---|
914 | ENDIF |
---|
915 | IF( med_diag%GMIDC%dgsave ) THEN |
---|
916 | CALL iom_put( "GMIDC" , gmidc2d ) |
---|
917 | DEALLOCATE( gmidc2d ) |
---|
918 | ENDIF |
---|
919 | IF( med_diag%GMEDC%dgsave ) THEN |
---|
920 | CALL iom_put( "GMEDC" , gmedc2d ) |
---|
921 | DEALLOCATE( gmedc2d ) |
---|
922 | ENDIF |
---|
923 | IF( med_diag%IBEN_N%dgsave ) THEN |
---|
924 | CALL iom_put( "IBEN_N" , iben_n2d ) |
---|
925 | DEALLOCATE( iben_n2d ) |
---|
926 | ENDIF |
---|
927 | IF( med_diag%IBEN_FE%dgsave ) THEN |
---|
928 | CALL iom_put( "IBEN_FE" , iben_fe2d ) |
---|
929 | DEALLOCATE( iben_fe2d ) |
---|
930 | ENDIF |
---|
931 | IF( med_diag%IBEN_C%dgsave ) THEN |
---|
932 | CALL iom_put( "IBEN_C" , iben_c2d ) |
---|
933 | DEALLOCATE( iben_c2d ) |
---|
934 | ENDIF |
---|
935 | IF( med_diag%IBEN_SI%dgsave ) THEN |
---|
936 | CALL iom_put( "IBEN_SI" , iben_si2d ) |
---|
937 | DEALLOCATE( iben_si2d ) |
---|
938 | ENDIF |
---|
939 | IF( med_diag%IBEN_CA%dgsave ) THEN |
---|
940 | CALL iom_put( "IBEN_CA" , iben_ca2d ) |
---|
941 | DEALLOCATE( iben_ca2d ) |
---|
942 | ENDIF |
---|
943 | IF( med_diag%OBEN_N%dgsave ) THEN |
---|
944 | CALL iom_put( "OBEN_N" , oben_n2d ) |
---|
945 | DEALLOCATE( oben_n2d ) |
---|
946 | ENDIF |
---|
947 | IF( med_diag%OBEN_FE%dgsave ) THEN |
---|
948 | CALL iom_put( "OBEN_FE" , oben_fe2d ) |
---|
949 | DEALLOCATE( oben_fe2d ) |
---|
950 | ENDIF |
---|
951 | IF( med_diag%OBEN_C%dgsave ) THEN |
---|
952 | CALL iom_put( "OBEN_C" , oben_c2d ) |
---|
953 | DEALLOCATE( oben_c2d ) |
---|
954 | ENDIF |
---|
955 | IF( med_diag%OBEN_SI%dgsave ) THEN |
---|
956 | CALL iom_put( "OBEN_SI" , oben_si2d ) |
---|
957 | DEALLOCATE( oben_si2d ) |
---|
958 | ENDIF |
---|
959 | IF( med_diag%OBEN_CA%dgsave ) THEN |
---|
960 | CALL iom_put( "OBEN_CA" , oben_ca2d ) |
---|
961 | DEALLOCATE( oben_ca2d ) |
---|
962 | ENDIF |
---|
963 | IF( med_diag%SFR_OCAL%dgsave ) THEN |
---|
964 | CALL iom_put( "SFR_OCAL" , sfr_ocal2d ) |
---|
965 | DEALLOCATE( sfr_ocal2d ) |
---|
966 | ENDIF |
---|
967 | IF( med_diag%SFR_OARG%dgsave ) THEN |
---|
968 | CALL iom_put( "SFR_OARG" , sfr_oarg2d ) |
---|
969 | DEALLOCATE( sfr_oarg2d ) |
---|
970 | ENDIF |
---|
971 | IF( med_diag%LYSO_CA%dgsave ) THEN |
---|
972 | CALL iom_put( "LYSO_CA" , lyso_ca2d ) |
---|
973 | DEALLOCATE( lyso_ca2d ) |
---|
974 | ENDIF |
---|
975 | # endif |
---|
976 | !! |
---|
977 | !! ** 3D diagnostics |
---|
978 | IF( med_diag%TPP3%dgsave ) THEN |
---|
979 | CALL iom_put( "TPP3" , tpp3d ) |
---|
980 | DEALLOCATE( tpp3d ) |
---|
981 | ENDIF |
---|
982 | IF( med_diag%DETFLUX3%dgsave ) THEN |
---|
983 | CALL iom_put( "DETFLUX3" , detflux3d ) |
---|
984 | DEALLOCATE( detflux3d ) |
---|
985 | ENDIF |
---|
986 | IF( med_diag%REMIN3N%dgsave ) THEN |
---|
987 | CALL iom_put( "REMIN3N" , remin3dn ) |
---|
988 | DEALLOCATE( remin3dn ) |
---|
989 | ENDIF |
---|
990 | # if defined key_roam |
---|
991 | IF( med_diag%PH3%dgsave ) THEN |
---|
992 | CALL iom_put( "PH3" , f3_pH ) |
---|
993 | ENDIF |
---|
994 | IF( med_diag%OM_CAL3%dgsave ) THEN |
---|
995 | CALL iom_put( "OM_CAL3" , f3_omcal ) |
---|
996 | ENDIF |
---|
997 | !! |
---|
998 | !! AXY (09/11/16): 2D CMIP6 diagnostics |
---|
999 | IF( med_diag%INTDISSIC%dgsave ) THEN |
---|
1000 | CALL iom_put( "INTDISSIC" , intdissic ) |
---|
1001 | DEALLOCATE( intdissic ) |
---|
1002 | ENDIF |
---|
1003 | IF( med_diag%INTDISSIN%dgsave ) THEN |
---|
1004 | CALL iom_put( "INTDISSIN" , intdissin ) |
---|
1005 | DEALLOCATE( intdissin ) |
---|
1006 | ENDIF |
---|
1007 | IF( med_diag%INTDISSISI%dgsave ) THEN |
---|
1008 | CALL iom_put( "INTDISSISI" , intdissisi ) |
---|
1009 | DEALLOCATE( intdissisi ) |
---|
1010 | ENDIF |
---|
1011 | IF( med_diag%INTTALK%dgsave ) THEN |
---|
1012 | CALL iom_put( "INTTALK" , inttalk ) |
---|
1013 | DEALLOCATE( inttalk ) |
---|
1014 | ENDIF |
---|
1015 | IF( med_diag%O2min%dgsave ) THEN |
---|
1016 | CALL iom_put( "O2min" , o2min ) |
---|
1017 | DEALLOCATE( o2min ) |
---|
1018 | ENDIF |
---|
1019 | IF( med_diag%ZO2min%dgsave ) THEN |
---|
1020 | CALL iom_put( "ZO2min" , zo2min ) |
---|
1021 | DEALLOCATE( zo2min ) |
---|
1022 | ENDIF |
---|
1023 | IF( med_diag%FBDDTALK%dgsave ) THEN |
---|
1024 | CALL iom_put( "FBDDTALK" , fbddtalk ) |
---|
1025 | DEALLOCATE( fbddtalk ) |
---|
1026 | ENDIF |
---|
1027 | IF( med_diag%FBDDTDIC%dgsave ) THEN |
---|
1028 | CALL iom_put( "FBDDTDIC" , fbddtdic ) |
---|
1029 | DEALLOCATE( fbddtdic ) |
---|
1030 | ENDIF |
---|
1031 | IF( med_diag%FBDDTDIFE%dgsave ) THEN |
---|
1032 | CALL iom_put( "FBDDTDIFE" , fbddtdife ) |
---|
1033 | DEALLOCATE( fbddtdife ) |
---|
1034 | ENDIF |
---|
1035 | IF( med_diag%FBDDTDIN%dgsave ) THEN |
---|
1036 | CALL iom_put( "FBDDTDIN" , fbddtdin ) |
---|
1037 | DEALLOCATE( fbddtdin ) |
---|
1038 | ENDIF |
---|
1039 | IF( med_diag%FBDDTDISI%dgsave ) THEN |
---|
1040 | CALL iom_put( "FBDDTDISI" , fbddtdisi ) |
---|
1041 | DEALLOCATE( fbddtdisi ) |
---|
1042 | ENDIF |
---|
1043 | !! |
---|
1044 | !! AXY (09/11/16): 3D CMIP6 diagnostics |
---|
1045 | IF( med_diag%TPPD3%dgsave ) THEN |
---|
1046 | CALL iom_put( "TPPD3" , tppd3 ) |
---|
1047 | DEALLOCATE( tppd3 ) |
---|
1048 | ENDIF |
---|
1049 | IF( med_diag%BDDTALK3%dgsave ) THEN |
---|
1050 | CALL iom_put( "BDDTALK3" , bddtalk3 ) |
---|
1051 | DEALLOCATE( bddtalk3 ) |
---|
1052 | ENDIF |
---|
1053 | IF( med_diag%BDDTDIC3%dgsave ) THEN |
---|
1054 | CALL iom_put( "BDDTDIC3" , bddtdic3 ) |
---|
1055 | DEALLOCATE( bddtdic3 ) |
---|
1056 | ENDIF |
---|
1057 | IF( med_diag%BDDTDIFE3%dgsave ) THEN |
---|
1058 | CALL iom_put( "BDDTDIFE3" , bddtdife3 ) |
---|
1059 | DEALLOCATE( bddtdife3 ) |
---|
1060 | ENDIF |
---|
1061 | IF( med_diag%BDDTDIN3%dgsave ) THEN |
---|
1062 | CALL iom_put( "BDDTDIN3" , bddtdin3 ) |
---|
1063 | DEALLOCATE( bddtdin3 ) |
---|
1064 | ENDIF |
---|
1065 | IF( med_diag%BDDTDISI3%dgsave ) THEN |
---|
1066 | CALL iom_put( "BDDTDISI3" , bddtdisi3 ) |
---|
1067 | DEALLOCATE( bddtdisi3 ) |
---|
1068 | ENDIF |
---|
1069 | IF( med_diag%FD_NIT3%dgsave ) THEN |
---|
1070 | CALL iom_put( "FD_NIT3" , fd_nit3 ) |
---|
1071 | DEALLOCATE( fd_nit3 ) |
---|
1072 | ENDIF |
---|
1073 | IF( med_diag%FD_SIL3%dgsave ) THEN |
---|
1074 | CALL iom_put( "FD_SIL3" , fd_sil3 ) |
---|
1075 | DEALLOCATE( fd_sil3 ) |
---|
1076 | ENDIF |
---|
1077 | IF( med_diag%FD_CAL3%dgsave ) THEN |
---|
1078 | CALL iom_put( "FD_CAL3" , fd_cal3 ) |
---|
1079 | DEALLOCATE( fd_cal3 ) |
---|
1080 | ENDIF |
---|
1081 | IF( med_diag%FD_CAR3%dgsave ) THEN |
---|
1082 | CALL iom_put( "FD_CAR3" , fd_car3 ) |
---|
1083 | DEALLOCATE( fd_car3 ) |
---|
1084 | ENDIF |
---|
1085 | IF( med_diag%CO33%dgsave ) THEN |
---|
1086 | CALL iom_put( "CO33" , f3_co3 ) |
---|
1087 | ENDIF |
---|
1088 | IF( med_diag%CO3SATARAG3%dgsave ) THEN |
---|
1089 | CALL iom_put( "CO3SATARAG3" , f3_omarg ) |
---|
1090 | ENDIF |
---|
1091 | IF( med_diag%CO3SATCALC3%dgsave ) THEN |
---|
1092 | CALL iom_put( "CO3SATCALC3" , f3_omcal ) |
---|
1093 | ENDIF |
---|
1094 | IF( med_diag%EXPC3%dgsave ) THEN |
---|
1095 | CALL iom_put( "EXPC3" , expc3 ) |
---|
1096 | DEALLOCATE( expc3 ) |
---|
1097 | ENDIF |
---|
1098 | IF( med_diag%EXPN3%dgsave ) THEN |
---|
1099 | CALL iom_put( "EXPN3" , expn3 ) |
---|
1100 | DEALLOCATE( expn3 ) |
---|
1101 | ENDIF |
---|
1102 | IF( med_diag%DCALC3%dgsave ) THEN |
---|
1103 | CALL iom_put( "DCALC3" , dcalc3 ) |
---|
1104 | DEALLOCATE( dcalc3 ) |
---|
1105 | ENDIF |
---|
1106 | IF( med_diag%FEDISS3%dgsave ) THEN |
---|
1107 | CALL iom_put( "FEDISS3" , fediss3 ) |
---|
1108 | DEALLOCATE( fediss3 ) |
---|
1109 | ENDIF |
---|
1110 | IF( med_diag%FESCAV3%dgsave ) THEN |
---|
1111 | CALL iom_put( "FESCAV3" , fescav3 ) |
---|
1112 | DEALLOCATE( fescav3 ) |
---|
1113 | ENDIF |
---|
1114 | IF( med_diag%MIGRAZP3%dgsave ) THEN |
---|
1115 | CALL iom_put( "MIGRAZP3" , migrazp3 ) |
---|
1116 | DEALLOCATE( migrazp3 ) |
---|
1117 | ENDIF |
---|
1118 | IF( med_diag%MIGRAZD3%dgsave ) THEN |
---|
1119 | CALL iom_put( "MIGRAZD3" , migrazd3 ) |
---|
1120 | DEALLOCATE( migrazd3 ) |
---|
1121 | ENDIF |
---|
1122 | IF( med_diag%MEGRAZP3%dgsave ) THEN |
---|
1123 | CALL iom_put( "MEGRAZP3" , megrazp3 ) |
---|
1124 | DEALLOCATE( megrazp3 ) |
---|
1125 | ENDIF |
---|
1126 | IF( med_diag%MEGRAZD3%dgsave ) THEN |
---|
1127 | CALL iom_put( "MEGRAZD3" , megrazd3 ) |
---|
1128 | DEALLOCATE( megrazd3 ) |
---|
1129 | ENDIF |
---|
1130 | IF( med_diag%MEGRAZZ3%dgsave ) THEN |
---|
1131 | CALL iom_put( "MEGRAZZ3" , megrazz3 ) |
---|
1132 | DEALLOCATE( megrazz3 ) |
---|
1133 | ENDIF |
---|
1134 | IF( med_diag%O2SAT3%dgsave ) THEN |
---|
1135 | CALL iom_put( "O2SAT3" , o2sat3 ) |
---|
1136 | DEALLOCATE( o2sat3 ) |
---|
1137 | ENDIF |
---|
1138 | IF( med_diag%PBSI3%dgsave ) THEN |
---|
1139 | CALL iom_put( "PBSI3" , pbsi3 ) |
---|
1140 | DEALLOCATE( pbsi3 ) |
---|
1141 | ENDIF |
---|
1142 | IF( med_diag%PCAL3%dgsave ) THEN |
---|
1143 | CALL iom_put( "PCAL3" , pcal3 ) |
---|
1144 | DEALLOCATE( pcal3 ) |
---|
1145 | ENDIF |
---|
1146 | IF( med_diag%REMOC3%dgsave ) THEN |
---|
1147 | CALL iom_put( "REMOC3" , remoc3 ) |
---|
1148 | DEALLOCATE( remoc3 ) |
---|
1149 | ENDIF |
---|
1150 | IF( med_diag%PNLIMJ3%dgsave ) THEN |
---|
1151 | CALL iom_put( "PNLIMJ3" , pnlimj3 ) |
---|
1152 | DEALLOCATE( pnlimj3 ) |
---|
1153 | ENDIF |
---|
1154 | IF( med_diag%PNLIMN3%dgsave ) THEN |
---|
1155 | CALL iom_put( "PNLIMN3" , pnlimn3 ) |
---|
1156 | DEALLOCATE( pnlimn3 ) |
---|
1157 | ENDIF |
---|
1158 | IF( med_diag%PNLIMFE3%dgsave ) THEN |
---|
1159 | CALL iom_put( "PNLIMFE3" , pnlimfe3 ) |
---|
1160 | DEALLOCATE( pnlimfe3 ) |
---|
1161 | ENDIF |
---|
1162 | IF( med_diag%PDLIMJ3%dgsave ) THEN |
---|
1163 | CALL iom_put( "PDLIMJ3" , pdlimj3 ) |
---|
1164 | DEALLOCATE( pdlimj3 ) |
---|
1165 | ENDIF |
---|
1166 | IF( med_diag%PDLIMN3%dgsave ) THEN |
---|
1167 | CALL iom_put( "PDLIMN3" , pdlimn3 ) |
---|
1168 | DEALLOCATE( pdlimn3 ) |
---|
1169 | ENDIF |
---|
1170 | IF( med_diag%PDLIMFE3%dgsave ) THEN |
---|
1171 | CALL iom_put( "PDLIMFE3" , pdlimfe3 ) |
---|
1172 | DEALLOCATE( pdlimfe3 ) |
---|
1173 | ENDIF |
---|
1174 | IF( med_diag%PDLIMSI3%dgsave ) THEN |
---|
1175 | CALL iom_put( "PDLIMSI3" , pdlimsi3 ) |
---|
1176 | DEALLOCATE( pdlimsi3 ) |
---|
1177 | ENDIF |
---|
1178 | |
---|
1179 | # endif |
---|
1180 | |
---|
1181 | DEALLOCATE( zw2d ) |
---|
1182 | |
---|
1183 | ENDIF ! end of ln_diatrc option |
---|
1184 | |
---|
1185 | END SUBROUTINE bio_medusa_fin |
---|
1186 | |
---|
1187 | #else |
---|
1188 | !!====================================================================== |
---|
1189 | !! Dummy module : No MEDUSA bio-model |
---|
1190 | !!====================================================================== |
---|
1191 | CONTAINS |
---|
1192 | SUBROUTINE bio_medusa_fin( ) ! Empty routine |
---|
1193 | WRITE(*,*) 'bio_medusa_fin: You should not have seen this print! error?' |
---|
1194 | END SUBROUTINE bio_medusa_fin |
---|
1195 | #endif |
---|
1196 | |
---|
1197 | !!====================================================================== |
---|
1198 | END MODULE bio_medusa_fin_mod |
---|