[8025] | 1 | MODULE bio_med_diag_trc_mod |
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| 2 | !!====================================================================== |
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| 3 | !! *** MODULE bio_med_diag_trc_mod *** |
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| 4 | !! Calculates diagnostics |
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| 5 | !!====================================================================== |
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| 6 | !! History : |
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| 7 | !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 |
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| 8 | !!---------------------------------------------------------------------- |
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| 9 | #if defined key_medusa |
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| 10 | !!---------------------------------------------------------------------- |
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| 11 | !! MEDUSA bio-model |
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| 12 | !!---------------------------------------------------------------------- |
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| 13 | |
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| 14 | IMPLICIT NONE |
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| 15 | PRIVATE |
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| 16 | |
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| 17 | PUBLIC bio_med_diag_trc ! Called in bio_medusa_diag.F90 |
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| 18 | |
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| 19 | !!---------------------------------------------------------------------- |
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| 20 | !! NEMO/TOP 2.0 , LOCEAN-IPSL (2007) |
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| 21 | !! $Id$ |
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| 22 | !! Software governed by the CeCILL licence (modipsl/doc/NEMO_CeCILL.txt) |
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| 23 | !!---------------------------------------------------------------------- |
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| 24 | |
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| 25 | CONTAINS |
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| 26 | |
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| 27 | SUBROUTINE bio_med_diag_trc( jk ) |
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| 28 | !!------------------------------------------------------------------- |
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| 29 | !! *** ROUTINE bio_med_diag_trc *** |
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| 30 | !! Calculates diagnostics without using iom_use |
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| 31 | !!------------------------------------------------------------------- |
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| 32 | USE bio_medusa_mod |
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| 33 | USE dom_oce, ONLY: e3t_0, e3t_n, mbathy, tmask |
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| 34 | USE in_out_manager, ONLY: lwp, numout |
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| 35 | USE par_oce, ONLY: jpim1, jpjm1 |
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| 36 | USE phycst, ONLY: rsmall |
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| 37 | USE sbc_oce, ONLY: qsr, wndm |
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| 38 | USE sms_medusa, ONLY: f2_ccd_arg, f2_ccd_cal, & |
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| 39 | f3_omarg, f3_omcal, f3_pH, & |
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| 40 | i0100, i0150, i0200, i0500, i1000, & |
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| 41 | jdms, ocal_ccd, & |
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| 42 | xbetac, xbetan, xpar, xphi, & |
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| 43 | xthetapd, xthetapn, xthetazme, & |
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| 44 | xthetazmi, xze |
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| 45 | USE trc, ONLY: med_diag, trc2d, trc3d |
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| 46 | |
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| 47 | !!* Substitution |
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| 48 | # include "domzgr_substitute.h90" |
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| 49 | |
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| 50 | !! level |
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| 51 | INTEGER, INTENT( in ) :: jk |
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| 52 | |
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| 53 | !! Loop avariables |
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| 54 | INTEGER :: ji, jj, jn |
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| 55 | |
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| 56 | !! |
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| 57 | !! ** Without using iom_use |
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| 58 | # if defined key_debug_medusa |
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| 59 | IF (lwp) write (numout,*) 'trc_bio_medusa: diag in ij-jj-jk ln_diatrc' |
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| 60 | CALL flush(numout) |
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| 61 | # endif |
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| 62 | DO jj = 2,jpjm1 |
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| 63 | DO ji = 2,jpim1 |
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| 64 | IF (tmask(ji,jj,jk) == 1) then |
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| 65 | !!------------------------------------------------------- |
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| 66 | !! Prepare 2D diagnostics |
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| 67 | !!------------------------------------------------------- |
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| 68 | !! |
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| 69 | !! if ((kt / 240*240).eq.kt) then |
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| 70 | !! IF (lwp) write (*,*) '*******!MEDUSA DIAADD!*******',kt |
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| 71 | !! endif |
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| 72 | !! nitrogen inventory |
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| 73 | trc2d(ji,jj,1) = ftot_n(ji,jj) |
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| 74 | !! silicon inventory |
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| 75 | trc2d(ji,jj,2) = ftot_si(ji,jj) |
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| 76 | !! iron inventory |
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| 77 | trc2d(ji,jj,3) = ftot_fe(ji,jj) |
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| 78 | ENDIF |
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| 79 | ENDDO |
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| 80 | ENDDO |
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| 81 | |
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| 82 | DO jj = 2,jpjm1 |
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| 83 | DO ji = 2,jpim1 |
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| 84 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 85 | !! non-diatom production |
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| 86 | trc2d(ji,jj,4) = trc2d(ji,jj,4) + & |
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| 87 | (fprn(ji,jj) * zphn(ji,jj) * & |
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| 88 | fse3t(ji,jj,jk)) |
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| 89 | !! non-diatom non-grazing losses |
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| 90 | trc2d(ji,jj,5) = trc2d(ji,jj,5) + & |
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| 91 | (fdpn(ji,jj) * fse3t(ji,jj,jk)) |
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| 92 | !! diatom production |
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| 93 | trc2d(ji,jj,6) = trc2d(ji,jj,6) + & |
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| 94 | (fprd(ji,jj) * zphd(ji,jj) * & |
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| 95 | fse3t(ji,jj,jk)) |
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| 96 | !! diatom non-grazing losses |
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| 97 | !! diagnostic field 8 is (ostensibly) supplied by trcsed.F |
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| 98 | trc2d(ji,jj,7) = trc2d(ji,jj,7) + & |
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| 99 | (fdpd(ji,jj) * fse3t(ji,jj,jk)) |
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| 100 | !! diatom silicon production |
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| 101 | trc2d(ji,jj,9) = trc2d(ji,jj,9) + & |
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| 102 | (fprds(ji,jj) * zpds(ji,jj) * & |
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| 103 | fse3t(ji,jj,jk)) |
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| 104 | !! diatom silicon dissolution |
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| 105 | trc2d(ji,jj,10) = trc2d(ji,jj,10) + & |
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| 106 | (fsdiss(ji,jj) * fse3t(ji,jj,jk)) |
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| 107 | ENDIF |
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| 108 | ENDDO |
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| 109 | ENDDO |
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| 110 | |
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| 111 | DO jj = 2,jpjm1 |
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| 112 | DO ji = 2,jpim1 |
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| 113 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 114 | !! microzoo grazing on non-diatoms |
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| 115 | trc2d(ji,jj,11) = trc2d(ji,jj,11) + & |
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| 116 | (fgmipn(ji,jj) * fse3t(ji,jj,jk)) |
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| 117 | !! microzoo grazing on detrital nitrogen |
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| 118 | trc2d(ji,jj,12) = trc2d(ji,jj,12) + & |
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| 119 | (fgmid(ji,jj) * fse3t(ji,jj,jk)) |
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| 120 | !! microzoo non-grazing losses |
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| 121 | trc2d(ji,jj,13) = trc2d(ji,jj,13) + & |
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| 122 | (fdzmi(ji,jj) * fse3t(ji,jj,jk)) |
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| 123 | ENDIF |
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| 124 | ENDDO |
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| 125 | ENDDO |
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| 126 | |
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| 127 | DO jj = 2,jpjm1 |
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| 128 | DO ji = 2,jpim1 |
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| 129 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 130 | !! mesozoo grazing on non-diatoms |
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| 131 | trc2d(ji,jj,14) = trc2d(ji,jj,14) + & |
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| 132 | (fgmepn(ji,jj) * fse3t(ji,jj,jk)) |
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| 133 | !! mesozoo grazing on diatoms |
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| 134 | trc2d(ji,jj,15) = trc2d(ji,jj,15) + & |
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| 135 | (fgmepd(ji,jj) * fse3t(ji,jj,jk)) |
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| 136 | !! mesozoo grazing on microzoo |
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| 137 | trc2d(ji,jj,16) = trc2d(ji,jj,16) + & |
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| 138 | (fgmezmi(ji,jj) * fse3t(ji,jj,jk)) |
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| 139 | !! mesozoo grazing on detrital nitrogen |
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| 140 | trc2d(ji,jj,17) = trc2d(ji,jj,17) + & |
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| 141 | (fgmed(ji,jj) * fse3t(ji,jj,jk)) |
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| 142 | !! mesozoo non-grazing losses |
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| 143 | trc2d(ji,jj,18) = trc2d(ji,jj,18) + & |
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| 144 | (fdzme(ji,jj) * fse3t(ji,jj,jk)) |
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| 145 | ENDIF |
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| 146 | ENDDO |
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| 147 | ENDDO |
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| 148 | |
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| 149 | DO jj = 2,jpjm1 |
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| 150 | DO ji = 2,jpim1 |
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| 151 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 152 | !! diagnostic field 19 is (ostensibly) supplied by trcexp.F |
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| 153 | !! slow sinking detritus N production |
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| 154 | trc2d(ji,jj,20) = trc2d(ji,jj,20) + & |
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| 155 | (fslown(ji,jj) * fse3t(ji,jj,jk)) |
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| 156 | !! detrital remineralisation |
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| 157 | trc2d(ji,jj,21) = trc2d(ji,jj,21) + & |
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| 158 | (fdd(ji,jj) * fse3t(ji,jj,jk)) |
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| 159 | !! aeolian iron addition |
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| 160 | trc2d(ji,jj,22) = trc2d(ji,jj,22) + & |
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| 161 | (ffetop(ji,jj) * fse3t(ji,jj,jk)) |
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| 162 | !! seafloor iron addition |
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| 163 | trc2d(ji,jj,23) = trc2d(ji,jj,23) + & |
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| 164 | (ffebot(ji,jj) * fse3t(ji,jj,jk)) |
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| 165 | !! "free" iron scavenging |
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| 166 | trc2d(ji,jj,24) = trc2d(ji,jj,24) + & |
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| 167 | (ffescav(ji,jj) * fse3t(ji,jj,jk)) |
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| 168 | ENDIF |
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| 169 | ENDDO |
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| 170 | ENDDO |
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| 171 | |
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| 172 | DO jj = 2,jpjm1 |
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| 173 | DO ji = 2,jpim1 |
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| 174 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 175 | !! non-diatom J limitation term |
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| 176 | trc2d(ji,jj,25) = trc2d(ji,jj,25) + & |
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| 177 | (fjlim_pn(ji,jj) * zphn(ji,jj) * & |
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| 178 | fse3t(ji,jj,jk)) |
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| 179 | !! non-diatom N limitation term |
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| 180 | trc2d(ji,jj,26) = trc2d(ji,jj,26) + & |
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| 181 | (fnln(ji,jj) * zphn(ji,jj) * & |
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| 182 | fse3t(ji,jj,jk)) |
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| 183 | !! non-diatom Fe limitation term |
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| 184 | trc2d(ji,jj,27) = trc2d(ji,jj,27) + & |
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| 185 | (ffln2(ji,jj) * zphn(ji,jj) * & |
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| 186 | fse3t(ji,jj,jk)) |
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| 187 | !! diatom J limitation term |
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| 188 | trc2d(ji,jj,28) = trc2d(ji,jj,28) + & |
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| 189 | (fjlim_pd(ji,jj) * zphd(ji,jj) * & |
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| 190 | fse3t(ji,jj,jk)) |
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| 191 | !! diatom N limitation term |
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| 192 | trc2d(ji,jj,29) = trc2d(ji,jj,29) + & |
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| 193 | (fnld(ji,jj) * zphd(ji,jj) * & |
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| 194 | fse3t(ji,jj,jk)) |
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| 195 | !! diatom Fe limitation term |
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| 196 | trc2d(ji,jj,30) = trc2d(ji,jj,30) + & |
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| 197 | (ffld(ji,jj) * zphd(ji,jj) * & |
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| 198 | fse3t(ji,jj,jk)) |
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| 199 | !! diatom Si limitation term |
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| 200 | trc2d(ji,jj,31) = trc2d(ji,jj,31) + & |
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| 201 | (fsld2(ji,jj) * zphd(ji,jj) * & |
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| 202 | fse3t(ji,jj,jk)) |
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| 203 | !! diatom Si uptake limitation term |
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| 204 | trc2d(ji,jj,32) = trc2d(ji,jj,32) + & |
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| 205 | (fsld(ji,jj) * zphd(ji,jj) * & |
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| 206 | fse3t(ji,jj,jk)) |
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| 207 | ENDIF |
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| 208 | ENDDO |
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| 209 | ENDDO |
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| 210 | |
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| 211 | IF (jk.eq.i0100) THEN |
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| 212 | DO jj = 2,jpjm1 |
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| 213 | DO ji = 2,jpim1 |
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| 214 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 215 | !! slow detritus flux at 100 m |
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| 216 | trc2d(ji,jj,33) = fslownflux(ji,jj) |
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| 217 | ENDIF |
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| 218 | ENDDO |
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| 219 | ENDDO |
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| 220 | ENDIF |
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| 221 | |
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| 222 | IF (jk.eq.i0200) THEN |
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| 223 | DO jj = 2,jpjm1 |
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| 224 | DO ji = 2,jpim1 |
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| 225 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 226 | !! slow detritus flux at 200 m |
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| 227 | trc2d(ji,jj,34) = fslownflux(ji,jj) |
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| 228 | ENDIF |
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| 229 | ENDDO |
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| 230 | ENDDO |
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| 231 | ENDIF |
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| 232 | |
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| 233 | IF (jk.eq.i0500) THEN |
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| 234 | DO jj = 2,jpjm1 |
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| 235 | DO ji = 2,jpim1 |
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| 236 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 237 | !! slow detritus flux at 500 m |
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| 238 | trc2d(ji,jj,35) = fslownflux(ji,jj) |
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| 239 | ENDIF |
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| 240 | ENDDO |
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| 241 | ENDDO |
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| 242 | ENDIF |
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| 243 | |
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| 244 | IF (jk.eq.i1000) THEN |
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| 245 | DO jj = 2,jpjm1 |
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| 246 | DO ji = 2,jpim1 |
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| 247 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 248 | !! slow detritus flux at 1000 m |
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| 249 | trc2d(ji,jj,36) = fslownflux(ji,jj) |
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| 250 | ENDIF |
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| 251 | ENDDO |
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| 252 | ENDDO |
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| 253 | ENDIF |
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| 254 | |
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| 255 | DO jj = 2,jpjm1 |
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| 256 | DO ji = 2,jpim1 |
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| 257 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 258 | !! non-fast N full column regeneration |
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| 259 | trc2d(ji,jj,37) = trc2d(ji,jj,37) + fregen(ji,jj) |
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| 260 | !! non-fast Si full column regeneration |
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| 261 | trc2d(ji,jj,38) = trc2d(ji,jj,38) + fregensi(ji,jj) |
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| 262 | !! non-fast N regeneration to 100 m |
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| 263 | ENDIF |
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| 264 | ENDDO |
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| 265 | ENDDO |
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| 266 | |
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| 267 | IF (jk.eq.i0100) THEN |
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| 268 | DO jj = 2,jpjm1 |
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| 269 | DO ji = 2,jpim1 |
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| 270 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 271 | trc2d(ji,jj,39) = trc2d(ji,jj,37) |
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| 272 | ENDIF |
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| 273 | ENDDO |
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| 274 | ENDDO |
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| 275 | ENDIF |
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| 276 | |
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| 277 | IF (jk.eq.i0200) THEN |
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| 278 | DO jj = 2,jpjm1 |
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| 279 | DO ji = 2,jpim1 |
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| 280 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 281 | !! non-fast N regeneration to 200 m |
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| 282 | trc2d(ji,jj,40) = trc2d(ji,jj,37) |
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| 283 | ENDIF |
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| 284 | ENDDO |
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| 285 | ENDDO |
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| 286 | ENDIF |
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| 287 | |
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| 288 | IF (jk.eq.i0500) THEN |
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| 289 | DO jj = 2,jpjm1 |
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| 290 | DO ji = 2,jpim1 |
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| 291 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 292 | !! non-fast N regeneration to 500 m |
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| 293 | trc2d(ji,jj,41) = trc2d(ji,jj,37) |
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| 294 | ENDIF |
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| 295 | ENDDO |
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| 296 | ENDDO |
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| 297 | ENDIF |
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| 298 | |
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| 299 | IF (jk.eq.i1000) THEN |
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| 300 | DO jj = 2,jpjm1 |
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| 301 | DO ji = 2,jpim1 |
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| 302 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 303 | !! non-fast N regeneration to 1000 m |
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| 304 | trc2d(ji,jj,42) = trc2d(ji,jj,37) |
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| 305 | ENDIF |
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| 306 | ENDDO |
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| 307 | ENDDO |
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| 308 | ENDIF |
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| 309 | |
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| 310 | DO jj = 2,jpjm1 |
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| 311 | DO ji = 2,jpim1 |
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| 312 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 313 | !! fast sinking detritus N production |
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| 314 | trc2d(ji,jj,43) = trc2d(ji,jj,43) + & |
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| 315 | (ftempn(ji,jj) * fse3t(ji,jj,jk)) |
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| 316 | !! fast sinking detritus Si production |
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| 317 | trc2d(ji,jj,44) = trc2d(ji,jj,44) + & |
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| 318 | (ftempsi(ji,jj) * fse3t(ji,jj,jk)) |
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| 319 | !! fast sinking detritus Fe production |
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| 320 | trc2d(ji,jj,45) = trc2d(ji,jj,45) + & |
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| 321 | (ftempfe(ji,jj) * fse3t(ji,jj,jk)) |
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| 322 | !! fast sinking detritus C production |
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| 323 | trc2d(ji,jj,46) = trc2d(ji,jj,46) + & |
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| 324 | (ftempc(ji,jj) * fse3t(ji,jj,jk)) |
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| 325 | !! fast sinking detritus CaCO3 production |
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| 326 | trc2d(ji,jj,47) = trc2d(ji,jj,47) + & |
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| 327 | (ftempca(ji,jj) * fse3t(ji,jj,jk)) |
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| 328 | ENDIF |
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| 329 | ENDDO |
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| 330 | ENDDO |
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| 331 | |
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| 332 | IF (jk.eq.i0100) THEN |
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| 333 | DO jj = 2,jpjm1 |
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| 334 | DO ji = 2,jpim1 |
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| 335 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 336 | !! fast detritus N flux at 100 m |
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| 337 | trc2d(ji,jj,48) = ffastn(ji,jj) |
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| 338 | ENDIF |
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| 339 | ENDDO |
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| 340 | ENDDO |
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| 341 | ENDIF |
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| 342 | |
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| 343 | IF (jk.eq.i0200) THEN |
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| 344 | DO jj = 2,jpjm1 |
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| 345 | DO ji = 2,jpim1 |
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| 346 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 347 | !! fast detritus N flux at 200 m |
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| 348 | trc2d(ji,jj,49) = ffastn(ji,jj) |
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| 349 | ENDIF |
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| 350 | ENDDO |
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| 351 | ENDDO |
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| 352 | ENDIF |
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| 353 | |
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| 354 | IF (jk.eq.i0500) THEN |
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| 355 | DO jj = 2,jpjm1 |
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| 356 | DO ji = 2,jpim1 |
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| 357 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 358 | !! fast detritus N flux at 500 m |
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| 359 | trc2d(ji,jj,50) = ffastn(ji,jj) |
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| 360 | ENDIF |
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| 361 | ENDDO |
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| 362 | ENDDO |
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| 363 | ENDIF |
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| 364 | |
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| 365 | IF (jk.eq.i1000) THEN |
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| 366 | DO jj = 2,jpjm1 |
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| 367 | DO ji = 2,jpim1 |
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| 368 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 369 | !! fast detritus N flux at 1000 m |
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| 370 | trc2d(ji,jj,51) = ffastn(ji,jj) |
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| 371 | ENDIF |
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| 372 | ENDDO |
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| 373 | ENDDO |
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| 374 | ENDIF |
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| 375 | |
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| 376 | IF (jk.eq.i0100) THEN |
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| 377 | DO jj = 2,jpjm1 |
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| 378 | DO ji = 2,jpim1 |
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| 379 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 380 | !! N regeneration to 100 m |
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| 381 | trc2d(ji,jj,52) = fregenfast(ji,jj) |
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| 382 | ENDIF |
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| 383 | ENDDO |
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| 384 | ENDDO |
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| 385 | ENDIF |
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| 386 | |
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| 387 | IF (jk.eq.i0200) THEN |
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| 388 | DO jj = 2,jpjm1 |
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| 389 | DO ji = 2,jpim1 |
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| 390 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 391 | !! N regeneration to 200 m |
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| 392 | trc2d(ji,jj,53) = fregenfast(ji,jj) |
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| 393 | ENDIF |
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| 394 | ENDDO |
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| 395 | ENDDO |
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| 396 | ENDIF |
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| 397 | |
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| 398 | IF (jk.eq.i0500) THEN |
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| 399 | DO jj = 2,jpjm1 |
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| 400 | DO ji = 2,jpim1 |
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| 401 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 402 | !! N regeneration to 500 m |
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| 403 | trc2d(ji,jj,54) = fregenfast(ji,jj) |
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| 404 | ENDIF |
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| 405 | ENDDO |
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| 406 | ENDDO |
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| 407 | ENDIF |
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| 408 | |
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| 409 | IF (jk.eq.i1000) THEN |
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| 410 | DO jj = 2,jpjm1 |
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| 411 | DO ji = 2,jpim1 |
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| 412 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 413 | !! N regeneration to 1000 m |
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| 414 | trc2d(ji,jj,55) = fregenfast(ji,jj) |
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| 415 | ENDIF |
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| 416 | ENDDO |
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| 417 | ENDDO |
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| 418 | ENDIF |
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| 419 | |
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| 420 | IF (jk.eq.i0100) THEN |
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| 421 | DO jj = 2,jpjm1 |
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| 422 | DO ji = 2,jpim1 |
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| 423 | IF (tmask(ji,jj,jk) == 1) THEN |
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| 424 | !! fast detritus Si flux at 100 m |
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| 425 | trc2d(ji,jj,56) = ffastsi(ji,jj) |
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| 426 | ENDIF |
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| 427 | ENDDO |
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| 428 | ENDDO |
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| 429 | ENDIF |
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| 430 | |
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| 431 | IF (jk.eq.i0200) THEN |
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| 432 | DO jj = 2,jpjm1 |
---|
| 433 | DO ji = 2,jpim1 |
---|
| 434 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 435 | !! fast detritus Si flux at 200 m |
---|
| 436 | trc2d(ji,jj,57) = ffastsi(ji,jj) |
---|
| 437 | ENDIF |
---|
| 438 | ENDDO |
---|
| 439 | ENDDO |
---|
| 440 | ENDIF |
---|
| 441 | |
---|
| 442 | IF (jk.eq.i0500) THEN |
---|
| 443 | DO jj = 2,jpjm1 |
---|
| 444 | DO ji = 2,jpim1 |
---|
| 445 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 446 | !! fast detritus Si flux at 500 m |
---|
| 447 | trc2d(ji,jj,58) = ffastsi(ji,jj) |
---|
| 448 | ENDIF |
---|
| 449 | ENDDO |
---|
| 450 | ENDDO |
---|
| 451 | ENDIF |
---|
| 452 | |
---|
| 453 | IF (jk.eq.i1000) THEN |
---|
| 454 | DO jj = 2,jpjm1 |
---|
| 455 | DO ji = 2,jpim1 |
---|
| 456 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 457 | !! fast detritus Si flux at 1000 m |
---|
| 458 | trc2d(ji,jj,59) = ffastsi(ji,jj) |
---|
| 459 | ENDIF |
---|
| 460 | ENDDO |
---|
| 461 | ENDDO |
---|
| 462 | ENDIF |
---|
| 463 | |
---|
| 464 | IF (jk.eq.i0100) THEN |
---|
| 465 | DO jj = 2,jpjm1 |
---|
| 466 | DO ji = 2,jpim1 |
---|
| 467 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 468 | !! Si regeneration to 100 m |
---|
| 469 | trc2d(ji,jj,60) = fregenfastsi(ji,jj) |
---|
| 470 | ENDIF |
---|
| 471 | ENDDO |
---|
| 472 | ENDDO |
---|
| 473 | ENDIF |
---|
| 474 | |
---|
| 475 | IF (jk.eq.i0200) THEN |
---|
| 476 | DO jj = 2,jpjm1 |
---|
| 477 | DO ji = 2,jpim1 |
---|
| 478 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 479 | !! Si regeneration to 200 m |
---|
| 480 | trc2d(ji,jj,61) = fregenfastsi(ji,jj) |
---|
| 481 | ENDIF |
---|
| 482 | ENDDO |
---|
| 483 | ENDDO |
---|
| 484 | ENDIF |
---|
| 485 | |
---|
| 486 | IF (jk.eq.i0500) THEN |
---|
| 487 | DO jj = 2,jpjm1 |
---|
| 488 | DO ji = 2,jpim1 |
---|
| 489 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 490 | !! Si regeneration to 500 m |
---|
| 491 | trc2d(ji,jj,62) = fregenfastsi(ji,jj) |
---|
| 492 | ENDIF |
---|
| 493 | ENDDO |
---|
| 494 | ENDDO |
---|
| 495 | ENDIF |
---|
| 496 | |
---|
| 497 | IF (jk.eq.i1000) THEN |
---|
| 498 | DO jj = 2,jpjm1 |
---|
| 499 | DO ji = 2,jpim1 |
---|
| 500 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 501 | !! Si regeneration to 1000 m |
---|
| 502 | trc2d(ji,jj,63) = fregenfastsi(ji,jj) |
---|
| 503 | ENDIF |
---|
| 504 | ENDDO |
---|
| 505 | ENDDO |
---|
| 506 | ENDIF |
---|
| 507 | |
---|
| 508 | DO jj = 2,jpjm1 |
---|
| 509 | DO ji = 2,jpim1 |
---|
| 510 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 511 | !! sum of fast-sinking N fluxes |
---|
| 512 | trc2d(ji,jj,64) = trc2d(ji,jj,64) + & |
---|
| 513 | (freminn(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 514 | !! sum of fast-sinking Si fluxes |
---|
| 515 | trc2d(ji,jj,65) = trc2d(ji,jj,65) + & |
---|
| 516 | (freminsi(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 517 | !! sum of fast-sinking Fe fluxes |
---|
| 518 | trc2d(ji,jj,66) = trc2d(ji,jj,66) + & |
---|
| 519 | (freminfe(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 520 | !! sum of fast-sinking C fluxes |
---|
| 521 | trc2d(ji,jj,67) = trc2d(ji,jj,67) + & |
---|
| 522 | (freminc(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 523 | !! sum of fast-sinking Ca fluxes |
---|
| 524 | trc2d(ji,jj,68) = trc2d(ji,jj,68) + & |
---|
| 525 | (freminca(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 526 | ENDIF |
---|
| 527 | ENDDO |
---|
| 528 | ENDDO |
---|
| 529 | |
---|
| 530 | |
---|
| 531 | if (jk.eq.mbathy(ji,jj)) then |
---|
| 532 | DO jj = 2,jpjm1 |
---|
| 533 | DO ji = 2,jpim1 |
---|
| 534 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 535 | !! N sedimentation flux |
---|
| 536 | trc2d(ji,jj,69) = fsedn(ji,jj) |
---|
| 537 | !! Si sedimentation flux |
---|
| 538 | trc2d(ji,jj,70) = fsedsi(ji,jj) |
---|
| 539 | !! Fe sedimentation flux |
---|
| 540 | trc2d(ji,jj,71) = fsedfe(ji,jj) |
---|
| 541 | !! C sedimentation flux |
---|
| 542 | trc2d(ji,jj,72) = fsedc(ji,jj) |
---|
| 543 | !! Ca sedimentation flux |
---|
| 544 | trc2d(ji,jj,73) = fsedca(ji,jj) |
---|
| 545 | ENDIF |
---|
| 546 | ENDDO |
---|
| 547 | ENDDO |
---|
| 548 | endif |
---|
| 549 | |
---|
| 550 | if (jk.eq.1) then |
---|
| 551 | DO jj = 2,jpjm1 |
---|
| 552 | DO ji = 2,jpim1 |
---|
| 553 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 554 | trc2d(ji,jj,74) = qsr(ji,jj) |
---|
| 555 | trc2d(ji,jj,75) = xpar(ji,jj,jk) |
---|
| 556 | !! trc2d(ji,jj,75) = real(iters(ji,jj)) |
---|
| 557 | ENDIF |
---|
| 558 | ENDDO |
---|
| 559 | ENDDO |
---|
| 560 | endif |
---|
| 561 | |
---|
| 562 | DO jj = 2,jpjm1 |
---|
| 563 | DO ji = 2,jpim1 |
---|
| 564 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 565 | !! diagnostic fields 76 to 80 calculated below |
---|
| 566 | !! mixed layer non-diatom production |
---|
| 567 | trc2d(ji,jj,81) = trc2d(ji,jj,81) + fprn_ml(ji,jj) |
---|
| 568 | !! mixed layer diatom production |
---|
| 569 | trc2d(ji,jj,82) = trc2d(ji,jj,82) + fprd_ml(ji,jj) |
---|
| 570 | ENDIF |
---|
| 571 | ENDDO |
---|
| 572 | ENDDO |
---|
| 573 | |
---|
| 574 | # if defined key_gulf_finland |
---|
| 575 | if (jk.eq.1) then |
---|
| 576 | DO jj = 2,jpjm1 |
---|
| 577 | DO ji = 2,jpim1 |
---|
| 578 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 579 | !! Gulf of Finland check |
---|
| 580 | trc2d(ji,jj,83) = real(ibio_switch) |
---|
| 581 | ENDIF |
---|
| 582 | ENDDO |
---|
| 583 | ENDDO |
---|
| 584 | endif |
---|
| 585 | # else |
---|
| 586 | DO jj = 2,jpjm1 |
---|
| 587 | DO ji = 2,jpim1 |
---|
| 588 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 589 | !! calcite CCD depth |
---|
| 590 | trc2d(ji,jj,83) = ocal_ccd(ji,jj) |
---|
| 591 | ENDIF |
---|
| 592 | ENDDO |
---|
| 593 | ENDDO |
---|
| 594 | # endif |
---|
| 595 | DO jj = 2,jpjm1 |
---|
| 596 | DO ji = 2,jpim1 |
---|
| 597 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 598 | !! last model level above calcite CCD depth |
---|
| 599 | trc2d(ji,jj,84) = fccd(ji,jj) |
---|
| 600 | ENDIF |
---|
| 601 | ENDDO |
---|
| 602 | ENDDO |
---|
| 603 | |
---|
| 604 | IF (jk.eq.1) THEN |
---|
| 605 | DO jj = 2,jpjm1 |
---|
| 606 | DO ji = 2,jpim1 |
---|
| 607 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 608 | !! surface "free" iron |
---|
| 609 | trc2d(ji,jj,85) = xFree(ji,jj) |
---|
| 610 | ENDIF |
---|
| 611 | ENDDO |
---|
| 612 | ENDDO |
---|
| 613 | ENDIF |
---|
| 614 | |
---|
| 615 | ! I'm keeping this the same as before, but it looks like it should |
---|
| 616 | ! be i0100 and not i0200 - marc 8/5/17 |
---|
| 617 | IF (jk.eq.i0200) THEN |
---|
| 618 | DO jj = 2,jpjm1 |
---|
| 619 | DO ji = 2,jpim1 |
---|
| 620 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 621 | !! "free" iron at 100 m |
---|
| 622 | trc2d(ji,jj,86) = xFree(ji,jj) |
---|
| 623 | ENDIF |
---|
| 624 | ENDDO |
---|
| 625 | ENDDO |
---|
| 626 | ENDIF |
---|
| 627 | |
---|
| 628 | |
---|
| 629 | IF (jk.eq.i0200) THEN |
---|
| 630 | DO jj = 2,jpjm1 |
---|
| 631 | DO ji = 2,jpim1 |
---|
| 632 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 633 | !! "free" iron at 200 m |
---|
| 634 | trc2d(ji,jj,87) = xFree(ji,jj) |
---|
| 635 | ENDIF |
---|
| 636 | ENDDO |
---|
| 637 | ENDDO |
---|
| 638 | ENDIF |
---|
| 639 | |
---|
| 640 | |
---|
| 641 | IF (jk.eq.i0500) THEN |
---|
| 642 | DO jj = 2,jpjm1 |
---|
| 643 | DO ji = 2,jpim1 |
---|
| 644 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 645 | !! "free" iron at 500 m |
---|
| 646 | trc2d(ji,jj,88) = xFree(ji,jj) |
---|
| 647 | ENDIF |
---|
| 648 | ENDDO |
---|
| 649 | ENDDO |
---|
| 650 | ENDIF |
---|
| 651 | |
---|
| 652 | |
---|
| 653 | IF (jk.eq.i1000) THEN |
---|
| 654 | DO jj = 2,jpjm1 |
---|
| 655 | DO ji = 2,jpim1 |
---|
| 656 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 657 | !! "free" iron at 1000 m |
---|
| 658 | trc2d(ji,jj,89) = xFree(ji,jj) |
---|
| 659 | ENDIF |
---|
| 660 | ENDDO |
---|
| 661 | ENDDO |
---|
| 662 | ENDIF |
---|
| 663 | |
---|
| 664 | |
---|
| 665 | IF (jk.eq.1) THEN |
---|
| 666 | DO jj = 2,jpjm1 |
---|
| 667 | DO ji = 2,jpim1 |
---|
| 668 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 669 | !! AXY (27/06/12): extract "euphotic depth" |
---|
| 670 | trc2d(ji,jj,90) = xze(ji,jj) |
---|
| 671 | ENDIF |
---|
| 672 | ENDDO |
---|
| 673 | ENDDO |
---|
| 674 | ENDIF |
---|
| 675 | |
---|
| 676 | # if defined key_roam |
---|
| 677 | if (jk .eq. 1) then |
---|
| 678 | DO jj = 2,jpjm1 |
---|
| 679 | DO ji = 2,jpim1 |
---|
| 680 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 681 | !! ROAM provisionally has access to a further 20 2D |
---|
| 682 | !! diagnostics |
---|
| 683 | !! surface wind |
---|
| 684 | trc2d(ji,jj,91) = trc2d(ji,jj,91) + wndm(ji,jj) |
---|
| 685 | !! atmospheric pCO2 |
---|
| 686 | trc2d(ji,jj,92) = trc2d(ji,jj,92) + f_pco2atm(ji,jj) |
---|
| 687 | !! ocean pH |
---|
| 688 | trc2d(ji,jj,93) = trc2d(ji,jj,93) + f_ph(ji,jj) |
---|
| 689 | !! ocean pCO2 |
---|
| 690 | trc2d(ji,jj,94) = trc2d(ji,jj,94) + f_pco2w(ji,jj) |
---|
| 691 | !! ocean H2CO3 conc. |
---|
| 692 | trc2d(ji,jj,95) = trc2d(ji,jj,95) + f_h2co3(ji,jj) |
---|
| 693 | !! ocean HCO3 conc. |
---|
| 694 | trc2d(ji,jj,96) = trc2d(ji,jj,96) + f_hco3(ji,jj) |
---|
| 695 | !! ocean CO3 conc. |
---|
| 696 | trc2d(ji,jj,97) = trc2d(ji,jj,97) + f_co3(ji,jj) |
---|
| 697 | !! air-sea CO2 flux |
---|
| 698 | trc2d(ji,jj,98) = trc2d(ji,jj,98) + f_co2flux(ji,jj) |
---|
| 699 | ENDIF |
---|
| 700 | ENDDO |
---|
| 701 | ENDDO |
---|
| 702 | |
---|
| 703 | DO jj = 2,jpjm1 |
---|
| 704 | DO ji = 2,jpim1 |
---|
| 705 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 706 | !! ocean omega calcite |
---|
| 707 | trc2d(ji,jj,99) = trc2d(ji,jj,99) + f_omcal(ji,jj) |
---|
| 708 | !! ocean omega aragonite |
---|
| 709 | trc2d(ji,jj,100) = trc2d(ji,jj,100) + f_omarg(ji,jj) |
---|
| 710 | !! ocean TDIC |
---|
| 711 | trc2d(ji,jj,101) = trc2d(ji,jj,101) + f_TDIC(ji,jj) |
---|
| 712 | !! ocean TALK |
---|
| 713 | trc2d(ji,jj,102) = trc2d(ji,jj,102) + f_TALK(ji,jj) |
---|
| 714 | !! surface kw660 |
---|
| 715 | trc2d(ji,jj,103) = trc2d(ji,jj,103) + f_kw660(ji,jj) |
---|
| 716 | !! surface pressure |
---|
| 717 | trc2d(ji,jj,104) = trc2d(ji,jj,104) + f_pp0(ji,jj) |
---|
| 718 | !! air-sea O2 flux |
---|
| 719 | trc2d(ji,jj,105) = trc2d(ji,jj,105) + f_o2flux(ji,jj) |
---|
| 720 | !! ocean O2 saturation |
---|
| 721 | trc2d(ji,jj,106) = trc2d(ji,jj,106) + f_o2sat(ji,jj) |
---|
| 722 | !! depth calcite CCD |
---|
| 723 | trc2d(ji,jj,107) = f2_ccd_cal(ji,jj) |
---|
| 724 | !! depth aragonite CCD |
---|
| 725 | trc2d(ji,jj,108) = f2_ccd_arg(ji,jj) |
---|
| 726 | ENDIF |
---|
| 727 | ENDDO |
---|
| 728 | ENDDO |
---|
| 729 | endif |
---|
| 730 | |
---|
| 731 | if (jk .eq. mbathy(ji,jj)) then |
---|
| 732 | DO jj = 2,jpjm1 |
---|
| 733 | DO ji = 2,jpim1 |
---|
| 734 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 735 | !! seafloor omega calcite |
---|
| 736 | trc2d(ji,jj,109) = f3_omcal(ji,jj,jk) |
---|
| 737 | !! seafloor omega aragonite |
---|
| 738 | trc2d(ji,jj,110) = f3_omarg(ji,jj,jk) |
---|
| 739 | ENDIF |
---|
| 740 | ENDDO |
---|
| 741 | ENDDO |
---|
| 742 | endif |
---|
| 743 | |
---|
| 744 | if (jk.eq.i0100) then |
---|
| 745 | DO jj = 2,jpjm1 |
---|
| 746 | DO ji = 2,jpim1 |
---|
| 747 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 748 | !! diagnostic fields 111 to 117 calculated below |
---|
| 749 | !! rain ratio at 100 m |
---|
| 750 | trc2d(ji,jj,118) = & |
---|
| 751 | ffastca(ji,jj)/MAX(ffastc(ji,jj), rsmall) |
---|
| 752 | ENDIF |
---|
| 753 | ENDDO |
---|
| 754 | ENDDO |
---|
| 755 | endif |
---|
| 756 | |
---|
| 757 | if (jk.eq.i0500) then |
---|
| 758 | DO jj = 2,jpjm1 |
---|
| 759 | DO ji = 2,jpim1 |
---|
| 760 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 761 | !! rain ratio at 500 m |
---|
| 762 | trc2d(ji,jj,119) = & |
---|
| 763 | ffastca(ji,jj)/MAX(ffastc(ji,jj), rsmall) |
---|
| 764 | ENDIF |
---|
| 765 | ENDDO |
---|
| 766 | ENDDO |
---|
| 767 | endif |
---|
| 768 | |
---|
| 769 | if (jk.eq.i1000) then |
---|
| 770 | DO jj = 2,jpjm1 |
---|
| 771 | DO ji = 2,jpim1 |
---|
| 772 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 773 | !! rain ratio at 1000 m |
---|
| 774 | trc2d(ji,jj,120) = & |
---|
| 775 | ffastca(ji,jj)/MAX(ffastc(ji,jj), rsmall) |
---|
| 776 | ENDIF |
---|
| 777 | ENDDO |
---|
| 778 | ENDDO |
---|
| 779 | endif |
---|
| 780 | |
---|
| 781 | if (jk.eq.mbathy(ji,jj)) then |
---|
| 782 | DO jj = 2,jpjm1 |
---|
| 783 | DO ji = 2,jpim1 |
---|
| 784 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 785 | !! AXY (18/01/12): benthic flux diagnostics |
---|
| 786 | trc2d(ji,jj,121) = f_sbenin_n(ji,jj) + f_fbenin_n(ji,jj) |
---|
| 787 | trc2d(ji,jj,122) = f_sbenin_fe(ji,jj) + f_fbenin_fe(ji,jj) |
---|
| 788 | trc2d(ji,jj,123) = f_sbenin_c(ji,jj) + f_fbenin_c(ji,jj) |
---|
| 789 | trc2d(ji,jj,124) = f_fbenin_si(ji,jj) |
---|
| 790 | trc2d(ji,jj,125) = f_fbenin_ca(ji,jj) |
---|
| 791 | trc2d(ji,jj,126) = f_benout_n(ji,jj) |
---|
| 792 | trc2d(ji,jj,127) = f_benout_fe(ji,jj) |
---|
| 793 | trc2d(ji,jj,128) = f_benout_c(ji,jj) |
---|
| 794 | trc2d(ji,jj,129) = f_benout_si(ji,jj) |
---|
| 795 | trc2d(ji,jj,130) = f_benout_ca(ji,jj) |
---|
| 796 | ENDIF |
---|
| 797 | ENDDO |
---|
| 798 | ENDDO |
---|
| 799 | endif |
---|
| 800 | |
---|
| 801 | DO jj = 2,jpjm1 |
---|
| 802 | DO ji = 2,jpim1 |
---|
| 803 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 804 | !! diagnostics fields 131 to 135 calculated below |
---|
| 805 | trc2d(ji,jj,136) = f_runoff(ji,jj) |
---|
| 806 | !! AXY (19/07/12): amended to allow for riverine |
---|
| 807 | !! nutrient addition below surface |
---|
| 808 | trc2d(ji,jj,137) = trc2d(ji,jj,137) + & |
---|
| 809 | (f_riv_loc_n(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 810 | trc2d(ji,jj,138) = trc2d(ji,jj,138) + & |
---|
| 811 | (f_riv_loc_si(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 812 | trc2d(ji,jj,139) = trc2d(ji,jj,139) + & |
---|
| 813 | (f_riv_loc_c(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 814 | trc2d(ji,jj,140) = trc2d(ji,jj,140) + & |
---|
| 815 | (f_riv_loc_alk(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 816 | !! slow sinking detritus C production |
---|
| 817 | trc2d(ji,jj,141) = trc2d(ji,jj,141) + & |
---|
| 818 | (fslowc(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 819 | ENDIF |
---|
| 820 | ENDDO |
---|
| 821 | ENDDO |
---|
| 822 | |
---|
| 823 | if (jk.eq.i0100) then |
---|
| 824 | DO jj = 2,jpjm1 |
---|
| 825 | DO ji = 2,jpim1 |
---|
| 826 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 827 | !! slow detritus flux at 100 m |
---|
| 828 | trc2d(ji,jj,142) = fslowcflux(ji,jj) |
---|
| 829 | ENDIF |
---|
| 830 | ENDDO |
---|
| 831 | ENDDO |
---|
| 832 | endif |
---|
| 833 | |
---|
| 834 | if (jk.eq.i0200) then |
---|
| 835 | DO jj = 2,jpjm1 |
---|
| 836 | DO ji = 2,jpim1 |
---|
| 837 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 838 | !! slow detritus flux at 200 m |
---|
| 839 | trc2d(ji,jj,143) = fslowcflux(ji,jj) |
---|
| 840 | ENDIF |
---|
| 841 | ENDDO |
---|
| 842 | ENDDO |
---|
| 843 | endif |
---|
| 844 | |
---|
| 845 | |
---|
| 846 | if (jk.eq.i0500) then |
---|
| 847 | DO jj = 2,jpjm1 |
---|
| 848 | DO ji = 2,jpim1 |
---|
| 849 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 850 | !! slow detritus flux at 500 m |
---|
| 851 | trc2d(ji,jj,144) = fslowcflux(ji,jj) |
---|
| 852 | ENDIF |
---|
| 853 | ENDDO |
---|
| 854 | ENDDO |
---|
| 855 | endif |
---|
| 856 | |
---|
| 857 | |
---|
| 858 | if (jk.eq.i1000) then |
---|
| 859 | DO jj = 2,jpjm1 |
---|
| 860 | DO ji = 2,jpim1 |
---|
| 861 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 862 | !! slow detritus flux at 1000 m |
---|
| 863 | trc2d(ji,jj,145) = fslowcflux(ji,jj) |
---|
| 864 | ENDIF |
---|
| 865 | ENDDO |
---|
| 866 | ENDDO |
---|
| 867 | endif |
---|
| 868 | |
---|
| 869 | DO jj = 2,jpjm1 |
---|
| 870 | DO ji = 2,jpim1 |
---|
| 871 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 872 | !! carbon inventory |
---|
| 873 | trc2d(ji,jj,146) = trc2d(ji,jj,146) + ftot_c(ji,jj) |
---|
| 874 | !! alkalinity inventory |
---|
| 875 | trc2d(ji,jj,147) = trc2d(ji,jj,147) + ftot_a(ji,jj) |
---|
| 876 | !! oxygen inventory |
---|
| 877 | trc2d(ji,jj,148) = trc2d(ji,jj,148) + ftot_o2(ji,jj) |
---|
| 878 | ENDIF |
---|
| 879 | ENDDO |
---|
| 880 | ENDDO |
---|
| 881 | |
---|
| 882 | if (jk.eq.mbathy(ji,jj)) then |
---|
| 883 | DO jj = 2,jpjm1 |
---|
| 884 | DO ji = 2,jpim1 |
---|
| 885 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 886 | trc2d(ji,jj,149) = f_benout_lyso_ca(ji,jj) |
---|
| 887 | ENDIF |
---|
| 888 | ENDDO |
---|
| 889 | ENDDO |
---|
| 890 | endif |
---|
| 891 | |
---|
| 892 | DO jj = 2,jpjm1 |
---|
| 893 | DO ji = 2,jpim1 |
---|
| 894 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 895 | !! community respiration |
---|
| 896 | trc2d(ji,jj,150) = fcomm_resp(ji,jj) * fse3t(ji,jj,jk) |
---|
| 897 | ENDIF |
---|
| 898 | ENDDO |
---|
| 899 | ENDDO |
---|
| 900 | |
---|
| 901 | DO jj = 2,jpjm1 |
---|
| 902 | DO ji = 2,jpim1 |
---|
| 903 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 904 | !! |
---|
| 905 | !! AXY (14/02/14): a Valentines Day gift to BASIN - a |
---|
| 906 | !! shedload of new diagnostics that |
---|
| 907 | !! they'll most likely never need! |
---|
| 908 | !! (actually, as with all such gifts, |
---|
| 909 | !! I'm giving them some things I'd like |
---|
| 910 | !! myself!) |
---|
| 911 | !! |
---|
| 912 | !! ------------------------------------------------------ |
---|
| 913 | !! linear losses |
---|
| 914 | !! non-diatom |
---|
| 915 | trc2d(ji,jj,151) = trc2d(ji,jj,151) + & |
---|
| 916 | (fdpn2(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 917 | !! diatom |
---|
| 918 | trc2d(ji,jj,152) = trc2d(ji,jj,152) + & |
---|
| 919 | (fdpd2(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 920 | !! microzooplankton |
---|
| 921 | trc2d(ji,jj,153) = trc2d(ji,jj,153) + & |
---|
| 922 | (fdzmi2(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 923 | !! mesozooplankton |
---|
| 924 | trc2d(ji,jj,154) = trc2d(ji,jj,154) + & |
---|
| 925 | (fdzme2(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 926 | ENDIF |
---|
| 927 | ENDDO |
---|
| 928 | ENDDO |
---|
| 929 | |
---|
| 930 | DO jj = 2,jpjm1 |
---|
| 931 | DO ji = 2,jpim1 |
---|
| 932 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 933 | !! ------------------------------------------------------ |
---|
| 934 | !! microzooplankton grazing |
---|
| 935 | !! microzooplankton messy -> N |
---|
| 936 | trc2d(ji,jj,155) = trc2d(ji,jj,155) + & |
---|
| 937 | (xphi * (fgmipn(ji,jj) + & |
---|
| 938 | fgmid(ji,jj)) * fse3t(ji,jj,jk)) |
---|
| 939 | !! microzooplankton messy -> D |
---|
| 940 | trc2d(ji,jj,156) = trc2d(ji,jj,156) + & |
---|
| 941 | ((1. - xbetan) * finmi(ji,jj) * & |
---|
| 942 | fse3t(ji,jj,jk)) |
---|
| 943 | !! microzooplankton messy -> DIC |
---|
| 944 | trc2d(ji,jj,157) = trc2d(ji,jj,157) + & |
---|
| 945 | (xphi * ((xthetapn * fgmipn(ji,jj)) + & |
---|
| 946 | fgmidc(ji,jj)) * & |
---|
| 947 | fse3t(ji,jj,jk)) |
---|
| 948 | !! microzooplankton messy -> Dc |
---|
| 949 | trc2d(ji,jj,158) = trc2d(ji,jj,158) + & |
---|
| 950 | ((1. - xbetac) * ficmi(ji,jj) * & |
---|
| 951 | fse3t(ji,jj,jk)) |
---|
| 952 | !! microzooplankton excretion |
---|
| 953 | trc2d(ji,jj,159) = trc2d(ji,jj,159) + & |
---|
| 954 | (fmiexcr(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 955 | !! microzooplankton respiration |
---|
| 956 | trc2d(ji,jj,160) = trc2d(ji,jj,160) + & |
---|
| 957 | (fmiresp(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 958 | !! microzooplankton growth |
---|
| 959 | trc2d(ji,jj,161) = trc2d(ji,jj,161) + & |
---|
| 960 | (fmigrow(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 961 | ENDIF |
---|
| 962 | ENDDO |
---|
| 963 | ENDDO |
---|
| 964 | |
---|
| 965 | DO jj = 2,jpjm1 |
---|
| 966 | DO ji = 2,jpim1 |
---|
| 967 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 968 | !! ------------------------------------------------------ |
---|
| 969 | !! mesozooplankton grazing |
---|
| 970 | !! mesozooplankton messy -> N |
---|
| 971 | trc2d(ji,jj,162) = trc2d(ji,jj,162) + & |
---|
| 972 | (xphi * & |
---|
| 973 | (fgmepn(ji,jj) + fgmepd(ji,jj) + & |
---|
| 974 | fgmezmi(ji,jj) + fgmed(ji,jj)) * & |
---|
| 975 | fse3t(ji,jj,jk)) |
---|
| 976 | !! mesozooplankton messy -> D |
---|
| 977 | trc2d(ji,jj,163) = trc2d(ji,jj,163) + & |
---|
| 978 | ((1. - xbetan) * finme(ji,jj) * & |
---|
| 979 | fse3t(ji,jj,jk)) |
---|
| 980 | !! mesozooplankton messy -> DIC |
---|
| 981 | trc2d(ji,jj,164) = trc2d(ji,jj,164) + & |
---|
| 982 | (xphi * & |
---|
| 983 | ((xthetapn * fgmepn(ji,jj)) + & |
---|
| 984 | (xthetapd * fgmepd(ji,jj)) + & |
---|
| 985 | (xthetazmi * fgmezmi(ji,jj)) + & |
---|
| 986 | fgmedc(ji,jj)) * fse3t(ji,jj,jk)) |
---|
| 987 | !! mesozooplankton messy -> Dc |
---|
| 988 | trc2d(ji,jj,165) = trc2d(ji,jj,165) + & |
---|
| 989 | ((1. - xbetac) * ficme(ji,jj) * & |
---|
| 990 | fse3t(ji,jj,jk)) |
---|
| 991 | !! mesozooplankton excretion |
---|
| 992 | trc2d(ji,jj,166) = trc2d(ji,jj,166) + & |
---|
| 993 | (fmeexcr(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 994 | !! mesozooplankton respiration |
---|
| 995 | trc2d(ji,jj,167) = trc2d(ji,jj,167) + & |
---|
| 996 | (fmeresp(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 997 | !! mesozooplankton growth |
---|
| 998 | trc2d(ji,jj,168) = trc2d(ji,jj,168) + & |
---|
| 999 | (fmegrow(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 1000 | ENDIF |
---|
| 1001 | ENDDO |
---|
| 1002 | ENDDO |
---|
| 1003 | |
---|
| 1004 | DO jj = 2,jpjm1 |
---|
| 1005 | DO ji = 2,jpim1 |
---|
| 1006 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 1007 | !! ------------------------------------------------------ |
---|
| 1008 | !! miscellaneous |
---|
| 1009 | !! detrital C remineralisation |
---|
| 1010 | trc2d(ji,jj,169) = trc2d(ji,jj,169) + & |
---|
| 1011 | (fddc(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 1012 | !! microzoo grazing on detrital carbon |
---|
| 1013 | trc2d(ji,jj,170) = trc2d(ji,jj,170) + & |
---|
| 1014 | (fgmidc(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 1015 | !! mesozoo grazing on detrital carbon |
---|
| 1016 | trc2d(ji,jj,171) = trc2d(ji,jj,171) + & |
---|
| 1017 | (fgmedc(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 1018 | !! |
---|
| 1019 | ENDIF |
---|
| 1020 | ENDDO |
---|
| 1021 | ENDDO |
---|
| 1022 | |
---|
| 1023 | !! ------------------------------------------------------ |
---|
| 1024 | !! |
---|
| 1025 | !! AXY (23/10/14): extract primary production related |
---|
| 1026 | !! surface fields to deal with diel |
---|
| 1027 | !! cycle issues; hijacking BASIN 150m |
---|
| 1028 | !! diagnostics to do so (see commented |
---|
| 1029 | !! out diagnostics below this section) |
---|
| 1030 | !! |
---|
| 1031 | !! extract relevant BASIN fields at 150m |
---|
| 1032 | if (jk .eq. i0150) then |
---|
| 1033 | DO jj = 2,jpjm1 |
---|
| 1034 | DO ji = 2,jpim1 |
---|
| 1035 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 1036 | !! Pn PP |
---|
| 1037 | trc2d(ji,jj,172) = trc2d(ji,jj,4) |
---|
| 1038 | !! Pn linear loss |
---|
| 1039 | trc2d(ji,jj,173) = trc2d(ji,jj,151) |
---|
| 1040 | !! Pn non-linear loss |
---|
| 1041 | trc2d(ji,jj,174) = trc2d(ji,jj,5) |
---|
| 1042 | !! Pn grazing to Zmi |
---|
| 1043 | trc2d(ji,jj,175) = trc2d(ji,jj,11) |
---|
| 1044 | !! Pn grazing to Zme |
---|
| 1045 | trc2d(ji,jj,176) = trc2d(ji,jj,14) |
---|
| 1046 | !! Pd PP |
---|
| 1047 | trc2d(ji,jj,177) = trc2d(ji,jj,6) |
---|
| 1048 | !! Pd linear loss |
---|
| 1049 | trc2d(ji,jj,178) = trc2d(ji,jj,152) |
---|
| 1050 | !! Pd non-linear loss |
---|
| 1051 | trc2d(ji,jj,179) = trc2d(ji,jj,7) |
---|
| 1052 | !! Pd grazing to Zme |
---|
| 1053 | trc2d(ji,jj,180) = trc2d(ji,jj,15) |
---|
| 1054 | !! Zmi grazing on D |
---|
| 1055 | trc2d(ji,jj,181) = trc2d(ji,jj,12) |
---|
| 1056 | !! Zmi grazing on Dc |
---|
| 1057 | trc2d(ji,jj,182) = trc2d(ji,jj,170) |
---|
| 1058 | !! Zmi messy feeding loss to N |
---|
| 1059 | trc2d(ji,jj,183) = trc2d(ji,jj,155) |
---|
| 1060 | !! Zmi messy feeding loss to D |
---|
| 1061 | trc2d(ji,jj,184) = trc2d(ji,jj,156) |
---|
| 1062 | !! Zmi messy feeding loss to DIC |
---|
| 1063 | trc2d(ji,jj,185) = trc2d(ji,jj,157) |
---|
| 1064 | !! Zmi messy feeding loss to Dc |
---|
| 1065 | trc2d(ji,jj,186) = trc2d(ji,jj,158) |
---|
| 1066 | !! Zmi excretion |
---|
| 1067 | trc2d(ji,jj,187) = trc2d(ji,jj,159) |
---|
| 1068 | !! Zmi respiration |
---|
| 1069 | trc2d(ji,jj,188) = trc2d(ji,jj,160) |
---|
| 1070 | !! Zmi growth |
---|
| 1071 | trc2d(ji,jj,189) = trc2d(ji,jj,161) |
---|
| 1072 | !! Zmi linear loss |
---|
| 1073 | trc2d(ji,jj,190) = trc2d(ji,jj,153) |
---|
| 1074 | !! Zmi non-linear loss |
---|
| 1075 | trc2d(ji,jj,191) = trc2d(ji,jj,13) |
---|
| 1076 | !! Zmi grazing to Zme |
---|
| 1077 | trc2d(ji,jj,192) = trc2d(ji,jj,16) |
---|
| 1078 | !! Zme grazing on D |
---|
| 1079 | trc2d(ji,jj,193) = trc2d(ji,jj,17) |
---|
| 1080 | !! Zme grazing on Dc |
---|
| 1081 | trc2d(ji,jj,194) = trc2d(ji,jj,171) |
---|
| 1082 | !! Zme messy feeding loss to N |
---|
| 1083 | trc2d(ji,jj,195) = trc2d(ji,jj,162) |
---|
| 1084 | !! Zme messy feeding loss to D |
---|
| 1085 | trc2d(ji,jj,196) = trc2d(ji,jj,163) |
---|
| 1086 | !! Zme messy feeding loss to DIC |
---|
| 1087 | trc2d(ji,jj,197) = trc2d(ji,jj,164) |
---|
| 1088 | !! Zme messy feeding loss to Dc |
---|
| 1089 | trc2d(ji,jj,198) = trc2d(ji,jj,165) |
---|
| 1090 | !! Zme excretion |
---|
| 1091 | trc2d(ji,jj,199) = trc2d(ji,jj,166) |
---|
| 1092 | !! Zme respiration |
---|
| 1093 | trc2d(ji,jj,200) = trc2d(ji,jj,167) |
---|
| 1094 | !! Zme growth |
---|
| 1095 | trc2d(ji,jj,201) = trc2d(ji,jj,168) |
---|
| 1096 | !! Zme linear loss |
---|
| 1097 | trc2d(ji,jj,202) = trc2d(ji,jj,154) |
---|
| 1098 | !! Zme non-linear loss |
---|
| 1099 | trc2d(ji,jj,203) = trc2d(ji,jj,18) |
---|
| 1100 | !! Slow detritus production, N |
---|
| 1101 | trc2d(ji,jj,204) = trc2d(ji,jj,20) |
---|
| 1102 | !! Slow detritus remineralisation, N |
---|
| 1103 | trc2d(ji,jj,205) = trc2d(ji,jj,21) |
---|
| 1104 | !! Slow detritus production, C |
---|
| 1105 | trc2d(ji,jj,206) = trc2d(ji,jj,141) |
---|
| 1106 | !! Slow detritus remineralisation, C |
---|
| 1107 | trc2d(ji,jj,207) = trc2d(ji,jj,169) |
---|
| 1108 | !! Fast detritus production, N |
---|
| 1109 | trc2d(ji,jj,208) = trc2d(ji,jj,43) |
---|
| 1110 | !! Fast detritus remineralisation, N |
---|
| 1111 | trc2d(ji,jj,209) = trc2d(ji,jj,21) |
---|
| 1112 | !! Fast detritus production, C |
---|
| 1113 | trc2d(ji,jj,210) = trc2d(ji,jj,64) |
---|
| 1114 | !! Fast detritus remineralisation, C |
---|
| 1115 | trc2d(ji,jj,211) = trc2d(ji,jj,67) |
---|
| 1116 | !! Community respiration |
---|
| 1117 | trc2d(ji,jj,212) = trc2d(ji,jj,150) |
---|
| 1118 | !! Slow detritus N flux at 150 m |
---|
| 1119 | trc2d(ji,jj,213) = fslownflux(ji,jj) |
---|
| 1120 | !! Slow detritus C flux at 150 m |
---|
| 1121 | trc2d(ji,jj,214) = fslowcflux(ji,jj) |
---|
| 1122 | !! Fast detritus N flux at 150 m |
---|
| 1123 | trc2d(ji,jj,215) = ffastn(ji,jj) |
---|
| 1124 | !! Fast detritus C flux at 150 m |
---|
| 1125 | trc2d(ji,jj,216) = ffastc(ji,jj) |
---|
| 1126 | ENDIF |
---|
| 1127 | ENDDO |
---|
| 1128 | ENDDO |
---|
| 1129 | endif |
---|
| 1130 | |
---|
| 1131 | !! |
---|
| 1132 | !! Jpalm (11-08-2014) |
---|
| 1133 | !! Add UKESM1 diagnoatics |
---|
| 1134 | !!^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ |
---|
| 1135 | if ((jk .eq. 1) .and.( jdms.eq.1)) then |
---|
| 1136 | DO jj = 2,jpjm1 |
---|
| 1137 | DO ji = 2,jpim1 |
---|
| 1138 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 1139 | !! DMS surface concentration |
---|
| 1140 | trc2d(ji,jj,221) = dms_surf(ji,jj) |
---|
| 1141 | !! AXY (13/03/15): add in other DMS estimates |
---|
| 1142 | !! DMS surface concentration |
---|
| 1143 | trc2d(ji,jj,222) = dms_andr(ji,jj) |
---|
| 1144 | !! DMS surface concentration |
---|
| 1145 | trc2d(ji,jj,223) = dms_simo(ji,jj) |
---|
| 1146 | !! DMS surface concentration |
---|
| 1147 | trc2d(ji,jj,224) = dms_aran(ji,jj) |
---|
| 1148 | !! DMS surface concentration |
---|
| 1149 | trc2d(ji,jj,225) = dms_hall(ji,jj) |
---|
| 1150 | ENDIF |
---|
| 1151 | ENDDO |
---|
| 1152 | ENDDO |
---|
| 1153 | endif |
---|
| 1154 | # endif |
---|
| 1155 | |
---|
| 1156 | DO jj = 2,jpjm1 |
---|
| 1157 | DO ji = 2,jpim1 |
---|
| 1158 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 1159 | !! other possible future diagnostics include: |
---|
| 1160 | !! - integrated tracer values (esp. biological) |
---|
| 1161 | !! - mixed layer tracer values |
---|
| 1162 | !! - sub-surface chlorophyll maxima (plus depth) |
---|
| 1163 | !! - different mixed layer depth criteria (T, sigma, |
---|
| 1164 | !! var. sigma) |
---|
| 1165 | !!------------------------------------------------------- |
---|
| 1166 | !! Prepare 3D diagnostics |
---|
| 1167 | !!------------------------------------------------------- |
---|
| 1168 | !! |
---|
| 1169 | !! primary production |
---|
| 1170 | trc3d(ji,jj,jk,1) = ((fprn(ji,jj) + fprd(ji,jj)) * & |
---|
| 1171 | zphn(ji,jj)) |
---|
| 1172 | !! detrital flux |
---|
| 1173 | trc3d(ji,jj,jk,2) = fslownflux(ji,jj) + ffastn(ji,jj) |
---|
| 1174 | !! remineralisation |
---|
| 1175 | trc3d(ji,jj,jk,3) = fregen(ji,jj) + & |
---|
| 1176 | (freminn(ji,jj) * fse3t(ji,jj,jk)) |
---|
| 1177 | ENDIF |
---|
| 1178 | ENDDO |
---|
| 1179 | ENDDO |
---|
| 1180 | # if defined key_roam |
---|
| 1181 | DO jj = 2,jpjm1 |
---|
| 1182 | DO ji = 2,jpim1 |
---|
| 1183 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 1184 | !! pH |
---|
| 1185 | trc3d(ji,jj,jk,4) = f3_pH(ji,jj,jk) |
---|
| 1186 | !! omega calcite |
---|
| 1187 | trc3d(ji,jj,jk,5) = f3_omcal(ji,jj,jk) |
---|
| 1188 | ENDIF |
---|
| 1189 | ENDDO |
---|
| 1190 | ENDDO |
---|
| 1191 | # else |
---|
| 1192 | DO jj = 2,jpjm1 |
---|
| 1193 | DO ji = 2,jpim1 |
---|
| 1194 | IF (tmask(ji,jj,jk) == 1) THEN |
---|
| 1195 | !! fast Si flux |
---|
| 1196 | trc3d(ji,jj,jk,4) = ffastsi(ji,jj) |
---|
| 1197 | ENDIF |
---|
| 1198 | ENDDO |
---|
| 1199 | ENDDO |
---|
| 1200 | # endif |
---|
| 1201 | |
---|
| 1202 | END SUBROUTINE bio_med_diag_trc |
---|
| 1203 | |
---|
| 1204 | #else |
---|
| 1205 | !!====================================================================== |
---|
| 1206 | !! Dummy module : No MEDUSA bio-model |
---|
| 1207 | !!====================================================================== |
---|
| 1208 | CONTAINS |
---|
| 1209 | SUBROUTINE bio_med_diag_trc( ) ! Empty routine |
---|
| 1210 | WRITE(*,*) 'bio_med_diag_trc: You should not have seen this print! error?' |
---|
| 1211 | END SUBROUTINE bio_med_diag_trc |
---|
| 1212 | #endif |
---|
| 1213 | |
---|
| 1214 | !!====================================================================== |
---|
| 1215 | END MODULE bio_med_diag_trc_mod |
---|