| 1 | #!/bin/ksh |
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| 2 | # $Id$ |
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| 3 | ############################################################## |
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| 4 | # Original : C. Talandier for NEMO team |
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| 5 | # Contact : nemo_st@locean-ipsl.upmc.fr |
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| 6 | # |
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| 7 | # It is called by the assessment.ksh script for a |
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| 8 | # given configuration |
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| 9 | # |
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| 10 | # INPUT ARGS: 2 |
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| 11 | # - zfile1 : first tracer statistic file to output |
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| 12 | # - zfile2 : second tracer statistic file to output |
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| 13 | # |
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| 14 | # WORK: It aims to : |
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| 15 | # |
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| 16 | # - Extract tracers statistics from ocean.output |
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| 17 | # for mon, mpi & omp runs |
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| 18 | # |
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| 19 | ############################################################## |
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| 20 | #set -xv |
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| 21 | ############################################################## |
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| 22 | |
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| 23 | # Initialization |
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| 24 | zfile1= |
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| 25 | zfile2= |
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| 26 | |
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| 27 | # Get arguments |
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| 28 | while getopts a:b:c: opt |
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| 29 | do |
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| 30 | case "$opt" in |
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| 31 | a) zfile1="$OPTARG";; |
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| 32 | b) zfile2="$OPTARG";; |
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| 33 | c) zfile3="$OPTARG";; |
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| 34 | esac |
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| 35 | done |
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| 36 | |
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| 37 | zfile[0]=${zfile1} |
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| 38 | zfile[1]=${zfile2} |
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| 39 | zfilein=${zfile3} |
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| 40 | |
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| 41 | ind=0 |
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| 42 | |
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| 43 | while [ ${ind} -le 1 ] ; do |
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| 44 | |
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| 45 | zpath=$( ( dirname ${zfile[${ind}]} ) ) |
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| 46 | |
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| 47 | awk '/----TRACER STAT----/ { print $0 }' ${zpath}/${zfilein} > ${zfile[${ind}]} |
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| 48 | awk '/MEAN NO 1 DIC/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 49 | awk '/MEAN NO 2 Alkalini/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 50 | awk '/MEAN NO 3 O2/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 51 | awk '/MEAN NO 4 CaCO3/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 52 | awk '/MEAN NO 5 PO4/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 53 | awk '/MEAN NO 6 POC/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 54 | awk '/MEAN NO 7 Si/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 55 | awk '/MEAN NO 8 PHY/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 56 | awk '/MEAN NO 9 ZOO/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 57 | awk '/MEAN NO 10 DOC/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 58 | awk '/MEAN NO 11 PHY2/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 59 | awk '/MEAN NO 12 ZOO2/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 60 | awk '/MEAN NO 13 BSi/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 61 | awk '/MEAN NO 14 Fer/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 62 | awk '/MEAN NO 15 BFe/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 63 | awk '/MEAN NO 16 GOC/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 64 | awk '/MEAN NO 17 SFe/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 65 | awk '/MEAN NO 18 DFe/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 66 | awk '/MEAN NO 19 DSi/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 67 | awk '/MEAN NO 20 NFe/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 68 | awk '/MEAN NO 21 NCHL/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 69 | awk '/MEAN NO 22 DCHL/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 70 | awk '/MEAN NO 23 NO3/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 71 | awk '/MEAN NO 24 NH4/ { print $3, $4, $7, $8, $9, $10, $11, $12 }' ${zpath}/${zfilein} >> ${zfile[${ind}]} |
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| 72 | |
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| 73 | let ind=${ind}+1 |
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| 74 | done |
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