1 | !>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> |
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2 | ! OPA MODEL general namelist for passive tracers |
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3 | ! ------------- |
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4 | !>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> |
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5 | ! |
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6 | !----------------------------------------------------------------------- |
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7 | ! nattrc |
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8 | !----------------------------------------------------------------------- |
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9 | ! |
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10 | ! NATTRC |
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11 | ! nwritetrc time step frequency for tracer outputs |
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12 | ! lrsttr boolean term for tracer model restart (true or false) |
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13 | ! nrsttr control of the time step for tracer model restart (0, 1 or 2) |
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14 | ! tracer type defined by : |
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15 | ! * short name |
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16 | ! * long_name |
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17 | ! * units |
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18 | ! * logical to read initial value from file or not |
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19 | ! * multiplicative coefficient |
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20 | ! * logical to save value |
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21 | ! |
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22 | &nattrc |
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23 | nwritetrc = 5475 |
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24 | lrsttr = .true. |
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25 | nrsttr = 0 |
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26 | tracer(1) = 'DIC ' , 'Dissolved inorganic Concentration ', 'umol/L' , .false. , .true. |
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27 | tracer(2) = 'Alkalini' , 'Total Alkalinity Concentration ', 'ueq/L ' , .false. , .true. |
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28 | tracer(3) = 'O2 ' , 'Dissolved Oxygen Concentration ', 'umol/L' , .false. , .true. |
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29 | tracer(4) = 'CaCO3 ' , 'Calcite Concentration ', 'umol/L' , .false. , .true. |
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30 | tracer(5) = 'PO4 ' , 'Phosphate Concentration ', 'umol/L' , .false. , .true. |
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31 | tracer(6) = 'POC ' , 'Small particle organic carbon Concentration', 'umol/L' , .false. , .true. |
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32 | tracer(7) = 'Si ' , 'Silicate Concentration ', 'umol/L' , .false. , .true. |
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33 | tracer(8) = 'PHY ' , 'Nanophytoplankton Concentration ', 'umol/L' , .false. , .true. |
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34 | tracer(9) = 'ZOO ' , 'Microzooplankton Concentration ', 'umol/L' , .false. , .true. |
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35 | tracer(10) = 'DOC ' , 'Dissolved organic Concentration ', 'umol/L' , .false. , .true. |
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36 | tracer(11) = 'PHY2 ' , 'Diatoms Concentration ', 'umol/L' , .false. , .true. |
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37 | tracer(12) = 'ZOO2 ' , 'Mesozooplankton Concentration ', 'umol/L' , .false. , .true. |
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38 | tracer(13) = 'BSi ' , 'Diatoms Silicate Concentration ', 'umol/L' , .false. , .true. |
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39 | tracer(14) = 'Fer ' , 'Dissolved Iron Concentration ', 'umol/L' , .false. , .true. |
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40 | tracer(15) = 'BFe ' , 'Big iron particles Concentration ', 'umol/L' , .false. , .true. |
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41 | tracer(16) = 'GOC ' , 'Big particle organic carbon Concentration ', 'umol/L' , .false. , .true. |
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42 | tracer(17) = 'SFe ' , 'Small iron particles Concentration ', 'umol/L' , .false. , .true. |
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43 | tracer(18) = 'DFe ' , 'Diatoms iron Concentration ', 'umol/L' , .false. , .true. |
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44 | tracer(19) = 'DSi ' , 'Sinking biogenic Silicate Concentration ', 'umol/L' , .false. , .true. |
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45 | tracer(20) = 'NFe ' , 'Nano iron Concentration ', 'umol/L' , .false. , .true. |
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46 | tracer(21) = 'NCHL ' , 'Nano chlorophyl Concentration ', 'umol/L' , .false. , .true. |
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47 | tracer(22) = 'DCHL ' , 'Diatoms chlorophyl Concentration ', 'umol/L' , .false. , .true. |
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48 | tracer(23) = 'NO3 ' , 'Nitrates Concentration ', 'umol/L' , .false. , .true. |
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49 | tracer(24) = 'NH4 ' , 'Ammonium Concentration ', 'umol/L' , .false. , .true. |
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50 | / |
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51 | !----------------------------------------------------------------------- |
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52 | ! natrtd dynamical tracers trends (#ifdef key_trc_diatrd) |
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53 | !----------------------------------------------------------------------- |
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54 | ! nwritetrd : time step frequency for dynamical trends outputs |
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55 | ! luttrd : logical to keep large diagnostics with trends or not |
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56 | ! one value per tracer |
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57 | &natrtd |
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58 | nwritetrd = 5475 |
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59 | luttrd(1) = .false. |
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60 | luttrd(2) = .false. |
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61 | luttrd(3) = .false. |
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62 | luttrd(4) = .false. |
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63 | luttrd(5) = .false. |
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64 | luttrd(6) = .false. |
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65 | luttrd(7) = .false. |
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66 | luttrd(8) = .false. |
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67 | luttrd(9) = .false. |
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68 | luttrd(10) = .false. |
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69 | luttrd(11) = .false. |
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70 | luttrd(12) = .false. |
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71 | luttrd(13) = .false. |
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72 | luttrd(14) = .false. |
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73 | luttrd(15) = .false. |
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74 | luttrd(16) = .false. |
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75 | luttrd(17) = .false. |
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76 | luttrd(18) = .false. |
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77 | luttrd(19) = .false. |
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78 | luttrd(20) = .false. |
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79 | luttrd(21) = .false. |
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80 | luttrd(22) = .false. |
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81 | luttrd(23) = .false. |
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82 | luttrd(24) = .false. |
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83 | / |
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84 | !----------------------------------------------------------------------- |
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85 | ! natdia additional 2D/3D (#ifdef key_trc_diaadd) |
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86 | !----------------------------------------------------------------------- |
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87 | ! nwritedia : time step frequency for additional arrays outputs |
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88 | ! 2D/3D diagnostic type defined by : |
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89 | ! * short name |
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90 | ! * long_name |
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91 | ! * units |
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92 | ! * logical to save value or not |
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93 | ! |
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94 | &natdia |
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95 | nwritedia = 5475 |
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96 | diag2d(1) = 'Cflx ' , 'DIC flux ', 'molC/m2/s ' |
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97 | diag2d(2) = 'Oflx ' , 'Oxygen flux ', 'molC/m2/s ' |
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98 | diag2d(3) = 'Kg ' , 'Gas transfer ', 'mol/m2/s/uatm' |
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99 | diag2d(4) = 'Delc ' , 'Delta CO2 ', 'uatm ' |
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100 | diag2d(5) = 'PMO ' , 'POC export ', 'molC/m2/s ' |
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101 | diag2d(6) = 'PMO2 ' , 'GOC export ', 'molC/m2/s ' |
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102 | diag2d(7) = 'ExpFe1 ' , 'Nano iron export ', 'molFe/m2/s ' |
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103 | diag2d(8) = 'ExpFe2 ' , 'Diatoms iron export ', 'molFe/m2/s ' |
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104 | diag2d(9) = 'ExpSi ' , 'Silicate export ', 'molSi/m2/s ' |
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105 | diag2d(10) = 'ExpCaCO3 ' , 'Calcite export ', 'molC/m2/s ' |
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106 | diag2d(11) = 'heup ' , 'euphotic layer depth ', 'm ' |
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107 | diag2d(12) = 'Fedep ' , 'Iron dep ', 'molFe/m2/s ' |
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108 | diag2d(13) = 'Nfix ' , 'Nitrogen Fixation ', 'molN/m2/s ' |
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109 | diag3d(1) = 'PH ' , 'PH ', '- ' |
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110 | diag3d(2) = 'CO3 ' , 'Bicarbonates ', 'mol/l ' |
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111 | diag3d(3) = 'CO3sat ' , 'CO3 saturation ', 'mol/l ' |
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112 | diag3d(4) = 'PAR ' , 'light penetration ', 'W/m2 ' |
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113 | diag3d(5) = 'PPPHY ' , 'Primary production of nanophyto ', 'molC/m3/s ' |
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114 | diag3d(6) = 'PPPHY2 ' , 'Primary production of diatoms ', 'molC/m3/s ' |
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115 | diag3d(7) = 'PPZOO ' , 'Primary production of microzoo ', 'molC/m3/s ' |
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116 | diag3d(8) = 'PPZOO2 ' , 'Primary production of mesozoo ', 'molC/m3/s ' |
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117 | diag3d(9) = 'PBSi ' , 'Primary production of Si diatoms ', 'molSi/m3/s ' |
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118 | diag3d(10) = 'PFeN ' , 'Primary production of nano iron ', 'molFe/m3/s ' |
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119 | diag3d(11) = 'PFeD ' , 'Primary production of diatoms iron', 'molFe/m3/s ' |
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120 | / |
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121 | !----------------------------------------------------------------------- |
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122 | ! natnum numerical schemes |
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123 | !----------------------------------------------------------------------- |
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124 | ! ndttrc time step frequency for passive tracers |
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125 | ! lhdf logical if true computes horizontal diffusion |
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126 | ! rsc tuning coefficient for Smolar. |
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127 | ! rtrn truncation value for Smolar. |
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128 | ! ncor number of corrective phases for Smolar. |
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129 | ! crosster logical if true computes Smolar crossterms |
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130 | &natnum |
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131 | ndttrc = 1 |
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132 | rsc = 1. |
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133 | rtrn = 1.e-15 |
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134 | ncortrc = 1 |
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135 | crosster = .false. |
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136 | / |
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137 | !----------------------------------------------------------------------- |
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138 | ! namtrcadv advection scheme for tracer (option not control by CPP keys) |
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139 | !----------------------------------------------------------------------- |
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140 | ! ln_trcadv_cen2 2nd order centered scheme (default F) |
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141 | ! ln_trcadv_tvd TVD scheme (default F) |
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142 | ! ln_trcadv_muscl MUSCL scheme (default F) |
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143 | ! ln_trcadv_muscl2 MUSCL2 scheme (default F) |
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144 | ! ln_trcadv_smolar SMOLAR scheme (default T) |
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145 | &namtrcadv |
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146 | ln_trcadv_cen2 = .false. |
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147 | ln_trcadv_tvd = .false. |
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148 | ln_trcadv_muscl = .true. |
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149 | ln_trcadv_muscl2 = .false. |
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150 | ln_trcadv_smolar = .false. |
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151 | / |
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152 | ! |
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153 | !----------------------------------------------------------------------- |
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154 | ! namtrcbbl bottom boundary layer scheme |
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155 | !----------------------------------------------------------------------- |
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156 | ! atrcbbl lateral tracer coeff. for bottom boundary layer scheme(m2/s) |
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157 | &namtrcbbl |
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158 | atrcbbl = 1000. |
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159 | / |
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160 | !----------------------------------------------------------------------- |
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161 | ! namtrcldf lateral diffusion scheme for tracer (option not control by CPP keys) |
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162 | !----------------------------------------------------------------------- |
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163 | ! Flag to performs lateral diffusion or not : |
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164 | ! ln_trcldf_diff |
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165 | ! Type of the operator : |
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166 | ! ln_trcldf_lap laplacian operator (default T) |
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167 | ! ln_trcldf_bilap bilaplacian operator (default F) |
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168 | ! Direction of action : |
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169 | ! ln_trcldf_level iso-level (default F) |
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170 | ! ln_trcldf_hor horizontal (geopotential) (default F)^** |
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171 | ! ln_trcldf_iso iso-neutral (default T)^* |
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172 | ! ^* require key_ldfslp to compute the direction of the lateral diffusion |
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173 | ! ^** require key_ldfslp in s-coordinate |
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174 | ! ahtrb0 background eddy diffusivity for isopycnal diffusion (m2/s) |
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175 | ! trcrat ratio betweeen passive and active tracer diffusion coeff |
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176 | ! ahtrc0 horizontal eddy diffus. for passive tracer |
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177 | ! aeivtr0 eddy induced veloc. coef. for passive tracer |
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178 | &namtrcldf |
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179 | ln_trcldf_diff = .true. |
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180 | ln_trcldf_lap = .true. |
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181 | ln_trcldf_bilap = .false. |
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182 | ln_trcldf_level = .false. |
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183 | ln_trcldf_hor = .false. |
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184 | ln_trcldf_iso = .true. |
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185 | ahtrb0 = 0. |
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186 | trcrat = 1. |
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187 | ahtrc0 = 2000 |
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188 | aeivtr0 = 2000. |
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189 | / |
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190 | !----------------------------------------------------------------------- |
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191 | ! namtrczdf vertical physics |
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192 | !----------------------------------------------------------------------- |
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193 | ! ln_zdfexp vertical physics: (=T) time splitting (T) (Default=F) |
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194 | ! (=F) euler backward (F) |
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195 | ! n_zdfexp number of sub-timestep for time splitting scheme |
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196 | &namtrczdf |
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197 | ln_trczdf_exp = .false. |
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198 | n_trczdf_exp = 3 |
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199 | / |
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200 | !----------------------------------------------------------------------- |
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201 | ! namtrcdmp tracer newtonian damping ('key_trcdmp') |
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202 | !----------------------------------------------------------------------- |
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203 | ! ndmptr type of damping in temperature and salinity |
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204 | ! (='latitude', damping poleward of 'ndmp' degrees and function |
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205 | ! of the distance-to-coast. Red and Med Seas as ndmp=-1) |
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206 | ! (=-1 damping only in Med and Red Seas) |
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207 | ! ndmpftr =1 create a damping.coeff NetCDF file (the 3D damping array) |
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208 | ! nmldmptr type of damping in the mixed layer |
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209 | ! (=0 damping throughout the water column) |
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210 | ! (=1 no damping in the mixed layer defined by avt >5cm2/s ) |
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211 | ! (=2 no damping in the mixed layer defined rho<rho(surf)+.01 ) |
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212 | ! sdmptr surface time scale for internal damping (days) |
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213 | ! bdmptr bottom time scale for internal damping (days) |
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214 | ! hdmptr depth of transition between sdmp and bdmp (meters) |
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215 | &namtrcdmp |
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216 | ndmptr = 20 |
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217 | ndmpftr = 0 |
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218 | nmldmptr = 1 |
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219 | sdmptr = 50. |
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220 | bdmptr = 360. |
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221 | hdmptr = 800. |
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222 | / |
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