1 | |
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2 | CCC $Header$ |
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3 | CCC TOP 1.0 , LOCEAN-IPSL (2005) |
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4 | C This software is governed by CeCILL licence see modipsl/doc/NEMO_CeCILL.txt |
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5 | C --------------------------------------------------------------------------- |
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6 | CC $Header$ |
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7 | CDIR$ LIST |
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8 | SUBROUTINE trcdib(kt,kindic) |
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9 | CCC--------------------------------------------------------------------- |
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10 | CCC |
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11 | CCC ROUTINE trcdib |
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12 | CCC ****************** |
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13 | CCC |
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14 | CCC Purpose : |
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15 | CCC --------- |
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16 | CCC Specific output of opa: biological fields |
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17 | CCC |
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18 | CCC If "key_mpp" or "key_fdir, direct access FORMAT |
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19 | CCC |
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20 | CCC |
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21 | CC Method : |
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22 | CC ------- |
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23 | CC |
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24 | CC At the beginning of the first time step (nit000), define all |
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25 | CC the NETCDF files and fields for passive tracer |
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26 | CC |
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27 | CC At each time step call histdef to compute the mean if necessary |
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28 | CC Each nwrite time step, output the instantaneous or mean fields |
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29 | CC |
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30 | CC IF kindic <0, output of fields before the model interruption. |
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31 | CC IF kindic =0, time step loop |
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32 | CC IF kindic >0, output of fields before the time step loop |
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33 | CC |
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34 | CC |
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35 | CC |
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36 | CC Input : |
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37 | CC ----- |
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38 | CC argument |
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39 | CC kt : time step |
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40 | CC kindic : indicator of abnormal termination |
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41 | CC COMMON |
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42 | CC /comcoh/ : orthogonal curvilinear coordinates |
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43 | CC and scale factors |
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44 | CC /comask/ : masks, bathymetry |
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45 | CC /cottrc/ : passive tracers fields (before,now |
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46 | CC ,after) |
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47 | CC /cimcdf/ : NETCDF variables |
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48 | CC |
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49 | CC Output : |
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50 | CC ------ |
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51 | CC file |
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52 | CC "histname" files: at least one file for each grid |
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53 | CC |
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54 | CC |
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55 | CC Workspace : |
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56 | CC --------- |
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57 | CC local |
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58 | CC zphy () : 3D aray for printing |
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59 | CC ztra : total nitrogen |
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60 | CC zder : derive in nitrogen |
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61 | CC |
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62 | CC |
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63 | CC EXTERNAL : |
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64 | CC -------- |
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65 | CC prihre, hist..., dianam |
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66 | CC |
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67 | CC MODIFICATIONS: |
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68 | CC -------------- |
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69 | CC original : 95-01 passive tracers (M. Levy) |
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70 | CC additions : 98-01 (C. Levy) NETCDF format using ioipsl interface |
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71 | CC additions : 99-01 (M.A. Foujols) adapted for passive tracer |
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72 | CC additions : 00-12 (E Kestenare) assign a parameter to name |
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73 | CC individual tracers |
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74 | CC---------------------------------------------------------------------- |
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75 | CC parameters and commons |
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76 | CC ====================== |
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77 | USE ioipsl |
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78 | USE oce_trc |
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79 | USE trp_trc |
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80 | USE in_out_manager |
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81 | USE trc |
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82 | USE sms |
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83 | USE dianam |
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84 | IMPLICIT NONE |
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85 | CC---------------------------------------------------------------------- |
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86 | CC local declarations |
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87 | CC ================== |
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88 | INTEGER kt, kindic |
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89 | |
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90 | # if defined key_passivetrc && key_trc_diabio |
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91 | |
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92 | INTEGER ji, jj, jk, jn, jl |
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93 | LOGICAL clp |
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94 | C |
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95 | CHARACTER*40 clhstnam |
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96 | CHARACTER*40 clop |
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97 | CHARACTER*20 cltra, cltrau |
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98 | CHARACTER*80 cltral |
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99 | |
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100 | REAL zsto,zout |
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101 | INTEGER iimi, iima, ijmi, ijma, ipk |
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102 | REAL zsec |
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103 | |
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104 | REAL ztra,zder,zphy(jpi,jpj,jpk) |
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105 | C |
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106 | CC---------------------------------------------------------------------- |
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107 | CC statement functions |
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108 | CC =================== |
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109 | CDIR$ NOLIST |
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110 | #include "domzgr_substitute.h90" |
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111 | CDIR$ LIST |
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112 | CCC--------------------------------------------------------------------- |
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113 | CCC OPA8, LODYC (15/11/96) |
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114 | CCC--------------------------------------------------------------------- |
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115 | C |
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116 | C 0. Initialisation |
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117 | C ----------------- |
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118 | C |
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119 | C local variable for debugging |
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120 | clp=.false. |
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121 | clp=clp.and.lwp |
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122 | C |
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123 | C Define frequency of output and means |
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124 | C |
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125 | # if defined key_diainstant |
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126 | zsto=nwritebio*rdt |
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127 | clop='inst(only(x))' |
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128 | # else |
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129 | zsto=rdt |
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130 | clop='ave(only(x))' |
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131 | # endif |
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132 | zout=nwritebio*rdt |
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133 | C |
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134 | C Define indexes of the horizontal output zoom |
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135 | iimi=1 |
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136 | iima=jpi |
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137 | ijmi=1 |
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138 | ijma=jpj |
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139 | c ipk limit storage in depth |
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140 | ipk = jpk |
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141 | C |
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142 | C |
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143 | C 1. Define NETCDF files and fields at beginning of first time step |
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144 | C ----------------------------------------------------------------- |
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145 | C |
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146 | IF(clp)WRITE(numout,*)'trcdib kt=',kt,' kindic ',kindic |
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147 | IF (kt.eq.nit000.and.kindic.eq.1) THEN |
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148 | C |
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149 | C Define the NETCDF files for biological trends |
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150 | C |
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151 | CALL dia_nam(clhstnam,nwrite,'biolog') |
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152 | IF(lwp)WRITE(numout,*) |
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153 | $ " Name of NETCDF file for biological trends ",clhstnam |
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154 | C Horizontal grid : glamt and gphit |
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155 | WRITE(numout,*)" indexes of zoom = ", |
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156 | $ iimi, iima, ijmi, ijma |
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157 | WRITE(numout,*)" limit storage in depth = ", ipk |
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158 | C |
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159 | CALL histbeg(clhstnam, jpi, glamt, jpj, gphit, |
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160 | $ iimi, iima-iimi+1, ijmi, ijma-ijmi+1, |
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161 | $ nit000-1, djulian, rdt, nhoritb, nitb) |
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162 | C Vertical grid for biological trends |
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163 | CALL histvert(nitb, 'deptht', 'Vertical T levels', |
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164 | $ 'm', ipk, gdept, ndepitb) |
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165 | C |
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166 | C Declare all the output fields as NETCDF variables |
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167 | C |
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168 | C |
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169 | C biological trends |
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170 | C |
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171 | DO jn=1,jpdiabio |
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172 | cltra=ctrbio(jn) ! short title for biological diagnostic |
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173 | cltral=ctrbil(jn) ! long title for biological diagnostic |
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174 | cltrau=ctrbiu(jn) ! UNIT for biological diagnostic |
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175 | CALL histdef(nitb, cltra, cltral, cltrau, jpi, jpj, nhoritb, |
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176 | $ ipk, 1, ipk, ndepitb, 32, clop, zsto, zout) |
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177 | END DO |
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178 | C |
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179 | C CLOSE netcdf Files |
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180 | C |
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181 | CALL histend(nitb) |
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182 | C |
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183 | C SOME diagnostics to DO first time |
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184 | C |
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185 | |
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186 | # if defined key_trc_npzd || defined key_trc_lobster1 |
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187 | C |
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188 | C initial total nitrogen |
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189 | C |
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190 | trai=0. |
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191 | DO jn=1,jptra |
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192 | DO jk=1,jpk |
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193 | DO jj=1,jpj |
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194 | DO ji=1,jpi |
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195 | trai=trai+trn(ji,jj,jk,jn)*fse3t(ji,jj,jk)*tmask(ji,jj |
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196 | $ ,jk) |
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197 | END DO |
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198 | END DO |
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199 | END DO |
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200 | END DO |
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201 | |
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202 | IF (lwp) then |
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203 | WRITE (numout,*) ' *** total nitrogen = ',trai, |
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204 | $ ' at beginning of run it= ',kt |
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205 | ENDIF |
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206 | C |
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207 | DO jk=1,jpk |
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208 | DO jj=1,jpj |
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209 | DO ji=1,jpi |
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210 | zphy(ji,jj,jk)=trn(ji,jj,jk,jpphy) |
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211 | END DO |
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212 | END DO |
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213 | END DO |
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214 | C |
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215 | IF (lwp) then |
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216 | WRITE (numout,*) ' -------' |
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217 | WRITE (numout,*) ' phyto' |
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218 | WRITE (numout,*) ' -------' |
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219 | CALL prizre(zphy,jpi,jpj,jpk,62,2,122,20,1,14,1,0.,numout) |
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220 | ENDIF |
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221 | # endif |
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222 | |
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223 | ELSE |
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224 | C |
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225 | C |
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226 | C 2. Start writing data |
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227 | C --------------------- |
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228 | C |
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229 | C biological trends |
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230 | C |
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231 | DO jn=1,jpdiabio |
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232 | cltra=ctrbio(jn) ! short title for biological diagnostic |
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233 | CALL histwrite(nitb, cltra, kt, trbio(:,:,:,jn), ndimt50, |
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234 | $ ndext50) |
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235 | END DO |
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236 | # if defined key_trc_npzd || defined key_trc_lobster1 |
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237 | |
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238 | IF(mod(kt-nit000+1,nwritebio).eq.0) THEN |
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239 | C |
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240 | C total nitrogen every nwritebio time step |
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241 | C |
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242 | ztra=0. |
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243 | DO jn=1,jptra |
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244 | DO jk=1,jpk |
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245 | DO jj=1,jpj |
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246 | DO ji=1,jpi |
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247 | ztra=ztra+trn(ji,jj,jk,jn)*fse3t(ji,jj,jk) |
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248 | $ *tmask(ji,jj,jk) |
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249 | END DO |
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250 | END DO |
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251 | END DO |
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252 | END DO |
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253 | C |
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254 | zder=(ztra-trai)/trai |
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255 | trai=ztra |
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256 | IF (lwp) THEN |
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257 | WRITE (numout,*) |
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258 | WRITE (numout,*) ' *** derive in total nitrogen = ', |
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259 | $ zder,' %',' at it= ',kt |
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260 | WRITE (numout,*) ' *** total nitrogen = ',trai, |
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261 | $ ' at it= ',kt |
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262 | ENDIF |
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263 | |
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264 | C |
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265 | DO jk=1,jpk |
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266 | DO jj=1,jpj |
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267 | DO ji=1,jpi |
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268 | zphy(ji,jj,jk)=trn(ji,jj,jk,jpphy) |
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269 | END DO |
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270 | END DO |
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271 | END DO |
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272 | C |
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273 | IF(lwp) THEN |
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274 | WRITE (numout,*) |
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275 | WRITE (numout,*) ' *** trcdib: at it= ',kt |
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276 | WRITE (numout,*) ' -------' |
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277 | WRITE (numout,*) ' phyto' |
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278 | WRITE (numout,*) ' -------' |
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279 | CALL prizre(zphy,jpi,jpj,jpk,jpj-1,2,jpj-1,20,1,14,1, |
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280 | $ 0.,numout) |
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281 | ENDIF |
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282 | |
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283 | ENDIF |
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284 | |
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285 | # endif |
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286 | C |
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287 | C synchronise FILE |
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288 | C |
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289 | IF(lwp .and. mod( kt, nwritebio ).EQ.0) THEN |
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290 | WRITE(numout,*) '**** trcdib : write NetCDF fields' |
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291 | CALL histsync(nitb) |
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292 | ENDIF |
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293 | |
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294 | ENDIF |
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295 | C |
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296 | C 3. Closing all files |
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297 | C -------------------- |
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298 | IF (kt.EQ.nitend.OR.kindic.LT.0) THEN |
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299 | CALL histclo(nitb) |
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300 | ENDIF |
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301 | |
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302 | # else |
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303 | C |
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304 | C no passive tracers |
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305 | C |
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306 | # endif |
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307 | |
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308 | C |
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309 | C |
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310 | RETURN |
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311 | END |
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