| 1 | !!----------------------------------------------------------------- |
|---|
| 2 | !! |
|---|
| 3 | !! ROUTINE trcini.pisces.h90 |
|---|
| 4 | !! ************************ |
|---|
| 5 | !! |
|---|
| 6 | !! PURPOSE : |
|---|
| 7 | !! --------- |
|---|
| 8 | !! Initialisation of PISCES biological and chemical variables |
|---|
| 9 | !! |
|---|
| 10 | !! INPUT : |
|---|
| 11 | !! ----- |
|---|
| 12 | !! common |
|---|
| 13 | !! all the common defined in opa |
|---|
| 14 | !! |
|---|
| 15 | !! |
|---|
| 16 | !! OUTPUT : : no |
|---|
| 17 | !! ------ |
|---|
| 18 | !! |
|---|
| 19 | !! EXTERNAL : |
|---|
| 20 | !! ---------- |
|---|
| 21 | !! p4zche |
|---|
| 22 | !! |
|---|
| 23 | !! MODIFICATIONS: |
|---|
| 24 | !! -------------- |
|---|
| 25 | !! original : 1988-07 E. MAIER-REIMER MPI HAMBURG |
|---|
| 26 | !! additions : 1999-10 O. Aumont and C. Le Quere |
|---|
| 27 | !! additions : 2002 O. Aumont (PISCES) |
|---|
| 28 | !! 03-2005 O. Aumont and A. El Moussaoui F90 |
|---|
| 29 | !!--------------------------------------------------------------------- |
|---|
| 30 | !! local declarations |
|---|
| 31 | !! ================== |
|---|
| 32 | INTEGER :: ichl,iband,mo |
|---|
| 33 | INTEGER , PARAMETER :: jpmois = 12, & |
|---|
| 34 | jpan = 1 |
|---|
| 35 | |
|---|
| 36 | REAL(wp) :: xtoto,expide,denitide,ztra |
|---|
| 37 | REAL(wp) , DIMENSION (jpi,jpj) :: riverdoc,river,ndepo |
|---|
| 38 | CHARACTER (len=34) :: clname |
|---|
| 39 | |
|---|
| 40 | INTEGER :: ipi,ipj,ipk,itime |
|---|
| 41 | INTEGER , DIMENSION (jpmois) :: istep |
|---|
| 42 | INTEGER , DIMENSION (jpan) :: istep0 |
|---|
| 43 | REAL(wp) :: zsecond, zdate0 |
|---|
| 44 | REAL(wp) , DIMENSION (jpi,jpj) :: zlon,zlat |
|---|
| 45 | REAL(wp), DIMENSION (jpk) :: zlev |
|---|
| 46 | INTEGER :: numriv,numdust,numbath,numdep |
|---|
| 47 | |
|---|
| 48 | !! 1. initialization |
|---|
| 49 | !! ----------------- |
|---|
| 50 | |
|---|
| 51 | !! computation of the record length for direct access FILE |
|---|
| 52 | !! this length depend of 512 for the t3d machine |
|---|
| 53 | !! |
|---|
| 54 | rfact = rdttra(1) * float(ndttrc) |
|---|
| 55 | rfactr = 1./rfact |
|---|
| 56 | IF(lwp) WRITE(numout,*) ' Tracer time step=',rfact,' rdt=',rdt |
|---|
| 57 | rfact2= rfact / float(nrdttrc) |
|---|
| 58 | rfact2r = 1./rfact2 |
|---|
| 59 | IF(lwp) write(numout,*) ' Biology time step=',rfact2 |
|---|
| 60 | |
|---|
| 61 | !! INITIALISE DUST INPUT FROM ATMOSPHERE |
|---|
| 62 | !! ------------------------------------- |
|---|
| 63 | |
|---|
| 64 | IF (bdustfer) THEN |
|---|
| 65 | clname='dust.orca.nc' |
|---|
| 66 | CALL flinopen(clname,mig(1),nlci,mjg(1),nlcj,.false.,ipi,ipj,0 & |
|---|
| 67 | & ,zlon,zlat,zlev,itime,istep,zdate0,zsecond,numdust) |
|---|
| 68 | CALL flinget(numdust,'dust',jpidta,jpjdta,0,jpmois,1, & |
|---|
| 69 | & 12,mig(1),nlci,mjg(1),nlcj,dustmo(1:nlci,1:nlcj,:) ) |
|---|
| 70 | CALL flinclo(numdust) |
|---|
| 71 | |
|---|
| 72 | ! Extra-halo initialization in MPP |
|---|
| 73 | IF( lk_mpp ) THEN |
|---|
| 74 | DO ji = nlci+1, jpi |
|---|
| 75 | dustmo(ji,:,:) = dustmo(1,:,:) |
|---|
| 76 | ENDDO |
|---|
| 77 | DO jj = nlcj+1, jpj |
|---|
| 78 | dustmo(:,jj,:)=dustmo(:,1,:) |
|---|
| 79 | ENDDO |
|---|
| 80 | ENDIF |
|---|
| 81 | ELSE |
|---|
| 82 | dustmo(:,:,:)=0. |
|---|
| 83 | ENDIF |
|---|
| 84 | |
|---|
| 85 | !! INITIALISE THE NUTRIENT INPUT BY RIVERS |
|---|
| 86 | !! --------------------------------------- |
|---|
| 87 | |
|---|
| 88 | IF (briver) THEN |
|---|
| 89 | clname='river.orca.nc' |
|---|
| 90 | CALL flinopen(clname,mig(1),nlci,mjg(1),nlcj,.false.,ipi,ipj,0 & |
|---|
| 91 | & ,zlon,zlat,zlev,itime,istep0,zdate0,zsecond,numriv) |
|---|
| 92 | CALL flinget(numriv,'riverdic',jpidta,jpjdta,0,jpan,1, & |
|---|
| 93 | & 1,mig(1),nlci,mjg(1),nlcj,river(1:nlci,1:nlcj) ) |
|---|
| 94 | CALL flinget(numriv,'riverdoc',jpidta,jpjdta,0,jpan,1, & |
|---|
| 95 | & 1,mig(1),nlci,mjg(1),nlcj,riverdoc(1:nlci,1:nlcj) ) |
|---|
| 96 | CALL flinclo(numriv) |
|---|
| 97 | |
|---|
| 98 | ! Extra-halo initialization in MPP |
|---|
| 99 | IF( lk_mpp ) THEN |
|---|
| 100 | DO ji = nlci+1, jpi |
|---|
| 101 | river(ji,:) = river(1,:) |
|---|
| 102 | riverdoc(ji,:) = riverdoc(1,:) |
|---|
| 103 | ENDDO |
|---|
| 104 | DO jj = nlcj+1, jpj |
|---|
| 105 | river(:,jj)=river(:,1) |
|---|
| 106 | riverdoc(:,jj) = riverdoc(:,1) |
|---|
| 107 | ENDDO |
|---|
| 108 | ENDIF |
|---|
| 109 | |
|---|
| 110 | ELSE |
|---|
| 111 | river(:,:)=0. |
|---|
| 112 | riverdoc(:,:)=0. |
|---|
| 113 | endif |
|---|
| 114 | |
|---|
| 115 | !! INITIALISE THE N INPUT BY DUST |
|---|
| 116 | !! --------------------------------------- |
|---|
| 117 | |
|---|
| 118 | IF (bndepo) THEN |
|---|
| 119 | clname='ndeposition.orca.nc' |
|---|
| 120 | CALL flinopen(clname,mig(1),nlci,mjg(1),nlcj,.false.,ipi,ipj,0 & |
|---|
| 121 | & ,zlon,zlat,zlev,itime,istep0,zdate0,zsecond,numdep) |
|---|
| 122 | CALL flinget(numdep,'ndep',jpidta,jpjdta,0,jpan,1, & |
|---|
| 123 | & 1,mig(1),nlci,mjg(1),nlcj,ndepo(1:nlci,1:nlcj) ) |
|---|
| 124 | CALL flinclo(numdep) |
|---|
| 125 | |
|---|
| 126 | ! Extra-halo initialization in MPP |
|---|
| 127 | IF( lk_mpp ) THEN |
|---|
| 128 | DO ji = nlci+1, jpi |
|---|
| 129 | ndepo(ji,:) = ndepo(1,:) |
|---|
| 130 | ENDDO |
|---|
| 131 | DO jj = nlcj+1, jpj |
|---|
| 132 | ndepo(:,jj)=ndepo(:,1) |
|---|
| 133 | ENDDO |
|---|
| 134 | ENDIF |
|---|
| 135 | |
|---|
| 136 | ELSE |
|---|
| 137 | ndepo(:,:)=0. |
|---|
| 138 | ENDIF |
|---|
| 139 | |
|---|
| 140 | !! Computation of the coastal mask. |
|---|
| 141 | !! Computation of an island mask to enhance coastal supply |
|---|
| 142 | !! of iron |
|---|
| 143 | !! ------------------------------------------------------- |
|---|
| 144 | |
|---|
| 145 | IF (bsedinput) THEN |
|---|
| 146 | clname='bathy.orca.nc' |
|---|
| 147 | CALL flinopen(clname,mig(1),nlci,mjg(1),nlcj,.false.,ipi,ipj,ipk & |
|---|
| 148 | & ,zlon,zlat,zlev,itime,istep0,zdate0,zsecond,numbath) |
|---|
| 149 | CALL flinget(numbath,'bathy',jpidta,jpjdta,jpk,jpan,1, & |
|---|
| 150 | & 1,mig(1),nlci,mjg(1),nlcj,cmask(1:nlci,1:nlcj,1:jpk) ) |
|---|
| 151 | CALL flinclo(numbath) |
|---|
| 152 | |
|---|
| 153 | ! Extra-halo initialization in MPP |
|---|
| 154 | IF( lk_mpp ) THEN |
|---|
| 155 | DO ji = nlci+1, jpi |
|---|
| 156 | cmask(ji,:,:) = cmask(1,:,:) |
|---|
| 157 | ENDDO |
|---|
| 158 | DO jj = nlcj+1, jpj |
|---|
| 159 | cmask(:,jj,:)=cmask(:,1,:) |
|---|
| 160 | ENDDO |
|---|
| 161 | ENDIF |
|---|
| 162 | |
|---|
| 163 | DO jk = 1, jpk |
|---|
| 164 | DO jj = 1, jpj |
|---|
| 165 | DO ji = 1, jpi |
|---|
| 166 | expide=min(8.,(fsdept(ji,jj,jk)/500.)**(-1.5)) |
|---|
| 167 | denitide=-0.9543+0.7662*log(expide)-0.235*log(expide)**2 |
|---|
| 168 | cmask(ji,jj,jk)=cmask(ji,jj,jk)*exp(denitide)/0.6858 |
|---|
| 169 | END DO |
|---|
| 170 | END DO |
|---|
| 171 | END DO |
|---|
| 172 | |
|---|
| 173 | ELSE |
|---|
| 174 | cmask(:,:,:)=0. |
|---|
| 175 | ENDIF |
|---|
| 176 | |
|---|
| 177 | !! Computation of the total atmospheric supply of Si |
|---|
| 178 | !! ------------------------------------------------- |
|---|
| 179 | |
|---|
| 180 | sumdepsi=0. |
|---|
| 181 | DO mo=1,12 |
|---|
| 182 | DO jj=2,jpjm1 |
|---|
| 183 | DO ji=2,jpim1 |
|---|
| 184 | sumdepsi=sumdepsi+dustmo(ji,jj,mo)/(12.*rmoss)*8.8 & |
|---|
| 185 | *0.075/28.1*e1t(ji,jj)*e2t(ji,jj)*tmask(ji,jj,1) |
|---|
| 186 | END DO |
|---|
| 187 | END DO |
|---|
| 188 | END DO |
|---|
| 189 | |
|---|
| 190 | IF( lk_mpp ) CALL mpp_sum( sumdepsi ) ! sum over the global domain |
|---|
| 191 | |
|---|
| 192 | !! COMPUTATION OF THE N/P RELEASE DUE TO COASTAL RIVERS |
|---|
| 193 | !! COMPUTATION OF THE Si RELEASE DUE TO COASTAL RIVERS |
|---|
| 194 | !! --------------------------------------------------- |
|---|
| 195 | |
|---|
| 196 | DO jj=1,jpj |
|---|
| 197 | DO ji=1,jpi |
|---|
| 198 | cotdep(ji,jj,1)=river(ji,jj)*1E9/(12.*raass & |
|---|
| 199 | *e1t(ji,jj)*e2t(ji,jj)*fse3t(ji,jj,1)+rtrn)*tmask(ji,jj,1) |
|---|
| 200 | po4dep(ji,jj,1)=(river(ji,jj)+riverdoc(ji,jj))*1E9 & |
|---|
| 201 | /(31.6*raass*e1t(ji,jj)*e2t(ji,jj)*fse3t(ji,jj,1)+rtrn) & |
|---|
| 202 | *tmask(ji,jj,1) |
|---|
| 203 | nitdep(ji,jj,1)=7.6*ndepo(ji,jj)*tmask(ji,jj,1)/(14E6*raass & |
|---|
| 204 | *fse3t(ji,jj,1)+rtrn) |
|---|
| 205 | END DO |
|---|
| 206 | END DO |
|---|
| 207 | |
|---|
| 208 | rivpo4input=0. |
|---|
| 209 | rivalkinput=0. |
|---|
| 210 | rivnitinput=0. |
|---|
| 211 | DO jj=2,jpjm1 |
|---|
| 212 | DO ji=2,jpim1 |
|---|
| 213 | rivpo4input=rivpo4input+po4dep(ji,jj,1)*(e1t(ji,jj)*e2t(ji,jj) & |
|---|
| 214 | *fse3t(ji,jj,1))*tmask(ji,jj,1)*raass |
|---|
| 215 | rivalkinput=rivalkinput+cotdep(ji,jj,1)*(e1t(ji,jj)*e2t(ji,jj) & |
|---|
| 216 | *fse3t(ji,jj,1))*tmask(ji,jj,1)*raass |
|---|
| 217 | rivnitinput=rivnitinput+nitdep(ji,jj,1)*(e1t(ji,jj)*e2t(ji,jj) & |
|---|
| 218 | *fse3t(ji,jj,1))*tmask(ji,jj,1)*raass |
|---|
| 219 | END DO |
|---|
| 220 | END DO |
|---|
| 221 | |
|---|
| 222 | IF( lk_mpp ) THEN |
|---|
| 223 | CALL mpp_sum( rivpo4input ) ! sum over the global domain |
|---|
| 224 | CALL mpp_sum( rivalkinput ) ! sum over the global domain |
|---|
| 225 | CALL mpp_sum( rivnitinput ) ! sum over the global domain |
|---|
| 226 | ENDIF |
|---|
| 227 | |
|---|
| 228 | |
|---|
| 229 | !! Coastal supply of iron |
|---|
| 230 | !! ---------------------- |
|---|
| 231 | |
|---|
| 232 | DO jk=1,jpkm1 |
|---|
| 233 | ironsed(:,:,jk)=sedfeinput*cmask(:,:,jk) & |
|---|
| 234 | /(fse3t(:,:,jk)*rjjss) |
|---|
| 235 | END DO |
|---|
| 236 | !!---------------------------------------------------------------------- |
|---|
| 237 | !! |
|---|
| 238 | !! Initialize biological variables |
|---|
| 239 | !! |
|---|
| 240 | !!---------------------------------------------------------------------- |
|---|
| 241 | |
|---|
| 242 | spocri = 0.003 |
|---|
| 243 | jkopt = 14 |
|---|
| 244 | |
|---|
| 245 | !! Set biological ratios |
|---|
| 246 | !! --------------------- |
|---|
| 247 | |
|---|
| 248 | rno3 = (16.+2.)/122. |
|---|
| 249 | po4r = 1./122. |
|---|
| 250 | o2ut = 172./122. |
|---|
| 251 | o2nit = 32./122. |
|---|
| 252 | rdenit = 97.6/16. |
|---|
| 253 | o2ut = 140./122. |
|---|
| 254 | |
|---|
| 255 | !!---------------------------------------------------------------------- |
|---|
| 256 | !! |
|---|
| 257 | !! Initialize chemical variables |
|---|
| 258 | !! |
|---|
| 259 | !!---------------------------------------------------------------------- |
|---|
| 260 | |
|---|
| 261 | !! set pre-industrial atmospheric [co2] (ppm) and o2/n2 ratio |
|---|
| 262 | !! ---------------------------------------------------------- |
|---|
| 263 | |
|---|
| 264 | atcox = 0.20946 |
|---|
| 265 | |
|---|
| 266 | !! Set lower/upper limits for temperature and salinity |
|---|
| 267 | !! --------------------------------------------------- |
|---|
| 268 | |
|---|
| 269 | salchl = 1./1.80655 |
|---|
| 270 | calcon = 1.03E-2 |
|---|
| 271 | |
|---|
| 272 | !! Set coefficients for apparent solubility equilibrium |
|---|
| 273 | !! of calcite (Ingle, 1800, eq. 6) |
|---|
| 274 | !! ---------------------------------------------------- |
|---|
| 275 | |
|---|
| 276 | akcc1 = -34.452 |
|---|
| 277 | akcc2 = -39.866 |
|---|
| 278 | akcc3 = 110.21 |
|---|
| 279 | akcc4 = -7.5752E-6 |
|---|
| 280 | |
|---|
| 281 | |
|---|
| 282 | !! Set coefficients for seawater pressure correction |
|---|
| 283 | !! ------------------------------------------------- |
|---|
| 284 | |
|---|
| 285 | devk1 = 24.2 |
|---|
| 286 | devk2 = 16.4 |
|---|
| 287 | devkb = 27.5 |
|---|
| 288 | devk1t = 0.085 |
|---|
| 289 | devk2t = 0.04 |
|---|
| 290 | devkbt = 0.095 |
|---|
| 291 | |
|---|
| 292 | devkst = 0.23 |
|---|
| 293 | devks = 35.4 |
|---|
| 294 | |
|---|
| 295 | !! Set universal gas constants |
|---|
| 296 | !! --------------------------- |
|---|
| 297 | |
|---|
| 298 | rgas = 83.143 |
|---|
| 299 | oxyco = 1./22.4144 |
|---|
| 300 | |
|---|
| 301 | !! Set boron constants |
|---|
| 302 | !! ------------------- |
|---|
| 303 | |
|---|
| 304 | bor1 = 0.00023 |
|---|
| 305 | bor2 = 1./10.82 |
|---|
| 306 | |
|---|
| 307 | !! Set volumetric solubility constants for co2 in ml/l (Weiss, 1974) |
|---|
| 308 | !! ----------------------------------------------------------------- |
|---|
| 309 | |
|---|
| 310 | c00 = -58.0931 |
|---|
| 311 | c01 = 90.5069 |
|---|
| 312 | c02 = 22.2940 |
|---|
| 313 | c03 = 0.027766 |
|---|
| 314 | c04 = -0.025888 |
|---|
| 315 | c05 = 0.0050578 |
|---|
| 316 | |
|---|
| 317 | !! Set coeff. for 1. dissoc. of carbonic acid (Edmond and Gieskes, 1970) |
|---|
| 318 | !! --------------------------------------------------------------------- |
|---|
| 319 | |
|---|
| 320 | c10 = -2307.1266 |
|---|
| 321 | c11 = 2.83655 |
|---|
| 322 | c12 = -1.5529413 |
|---|
| 323 | c13 = -4.0484 |
|---|
| 324 | c14 = -0.20760841 |
|---|
| 325 | c15 = 0.08468345 |
|---|
| 326 | c16 = -0.00654208 |
|---|
| 327 | c17 = -0.001005 |
|---|
| 328 | |
|---|
| 329 | !! Set coeff. for 2. dissoc. of carbonic acid (Edmond and Gieskes, 1970) |
|---|
| 330 | !! --------------------------------------------------------------------- |
|---|
| 331 | |
|---|
| 332 | c20 = -3351.6106 |
|---|
| 333 | c21 = -9.226508 |
|---|
| 334 | c22 = -0.2005743 |
|---|
| 335 | c23 = -23.9722 |
|---|
| 336 | c24 = -0.106901773 |
|---|
| 337 | c25 = 0.1130822 |
|---|
| 338 | c26 = -0.00846934 |
|---|
| 339 | c27 = -0.001005 |
|---|
| 340 | |
|---|
| 341 | !! Set coeff. for 1. dissoc. of boric acid (Edmond and Gieskes, 1970) |
|---|
| 342 | !! ------------------------------------------------------------------ |
|---|
| 343 | |
|---|
| 344 | cb0 = -8966.90 |
|---|
| 345 | cb1 = -2890.53 |
|---|
| 346 | cb2 = -77.942 |
|---|
| 347 | cb3 = 1.728 |
|---|
| 348 | cb4 = -0.0996 |
|---|
| 349 | cb5 = 148.0248 |
|---|
| 350 | cb6 = 137.1942 |
|---|
| 351 | cb7 = 1.62142 |
|---|
| 352 | cb8 = -24.4344 |
|---|
| 353 | cb9 = -25.085 |
|---|
| 354 | cb10 = -0.2474 |
|---|
| 355 | cb11 = 0.053105 |
|---|
| 356 | |
|---|
| 357 | !! Set coeff. for dissoc. of water (Dickson and Riley, 1979, |
|---|
| 358 | !! eq. 7, coefficient cw2 corrected from 0.9415 to 0.09415 |
|---|
| 359 | !! after pers. commun. to B. Bacastow, 1988) |
|---|
| 360 | !! --------------------------------------------------------- |
|---|
| 361 | |
|---|
| 362 | cw0 = -13847.26 |
|---|
| 363 | cw1 = 148.9652 |
|---|
| 364 | cw2 = -23.6521 |
|---|
| 365 | cw3 = 118.67 |
|---|
| 366 | cw4 = -5.977 |
|---|
| 367 | cw5 = 1.0495 |
|---|
| 368 | cw6 = -0.01615 |
|---|
| 369 | |
|---|
| 370 | !! Set volumetric solubility constants for o2 in ml/l (Weiss, 1970) |
|---|
| 371 | !! ---------------------------------------------------------------- |
|---|
| 372 | |
|---|
| 373 | ox0 = -58.3877 |
|---|
| 374 | ox1 = 85.8079 |
|---|
| 375 | ox2 = 23.8439 |
|---|
| 376 | ox3 = -0.034892 |
|---|
| 377 | ox4 = 0.015568 |
|---|
| 378 | ox5 = -0.0019387 |
|---|
| 379 | |
|---|
| 380 | !! FROM THE NEW BIOOPTIC MODEL PROPOSED JM ANDRE, WE READ HERE |
|---|
| 381 | !! A PRECOMPUTED ARRAY CORRESPONDING TO THE ATTENUATION COEFFICIENT |
|---|
| 382 | |
|---|
| 383 | open(49,file='kRGB61.txt',form='formatted') |
|---|
| 384 | do ichl=1,61 |
|---|
| 385 | READ(49,*) xtoto,(xkrgb(iband,ichl),iband = 1,3) |
|---|
| 386 | end do |
|---|
| 387 | close(49) |
|---|
| 388 | |
|---|
| 389 | #if defined key_off_degrad |
|---|
| 390 | |
|---|
| 391 | !! Read volume for degraded regions (DEGINIT) |
|---|
| 392 | !! ------------------------------------------ |
|---|
| 393 | |
|---|
| 394 | # if defined key_vpp |
|---|
| 395 | CALL READ3S(902,facvol,jpi,jpj,jpk) |
|---|
| 396 | # else |
|---|
| 397 | READ (902) facvol |
|---|
| 398 | # endif |
|---|
| 399 | #endif |
|---|
| 400 | |
|---|
| 401 | |
|---|
| 402 | !! Call p4zche to initialize the chemical constants |
|---|
| 403 | !! ------------------------------------------------ |
|---|
| 404 | |
|---|
| 405 | CALL p4zche |
|---|
| 406 | |
|---|
| 407 | IF(lwp) WRITE(numout,*) ' Initialisation of PISCES done' |
|---|
