[3] | 1 | MODULE domwri |
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| 2 | !!====================================================================== |
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| 3 | !! *** MODULE domwri *** |
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[2715] | 4 | !! Ocean initialization : write the ocean domain mesh file(s) |
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[3] | 5 | !!====================================================================== |
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[2528] | 6 | !! History : OPA ! 1997-02 (G. Madec) Original code |
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| 7 | !! 8.1 ! 1999-11 (M. Imbard) NetCDF FORMAT with IOIPSL |
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| 8 | !! NEMO 1.0 ! 2002-08 (G. Madec) F90 and several file |
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[2715] | 9 | !! 3.0 ! 2008-01 (S. Masson) add dom_uniq |
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| 10 | !! 4.0 ! 2011-01 (A. R. Porter, STFC Daresbury) dynamical allocation |
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[2528] | 11 | !!---------------------------------------------------------------------- |
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[3] | 12 | |
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| 13 | !!---------------------------------------------------------------------- |
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[84] | 14 | !! dom_wri : create and write mesh and mask file(s) |
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[2715] | 15 | !! dom_uniq : |
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[3] | 16 | !!---------------------------------------------------------------------- |
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| 17 | USE dom_oce ! ocean space and time domain |
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[2528] | 18 | USE in_out_manager ! I/O manager |
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| 19 | USE iom ! I/O library |
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| 20 | USE lbclnk ! lateral boundary conditions - mpp exchanges |
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| 21 | USE lib_mpp ! MPP library |
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[3] | 22 | |
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| 23 | IMPLICIT NONE |
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| 24 | PRIVATE |
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| 25 | |
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| 26 | PUBLIC dom_wri ! routine called by inidom.F90 |
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[1590] | 27 | |
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| 28 | !! * Substitutions |
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| 29 | # include "vectopt_loop_substitute.h90" |
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[3] | 30 | !!---------------------------------------------------------------------- |
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[2528] | 31 | !! NEMO/OPA 3.3 , NEMO Consortium (2010) |
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[1152] | 32 | !! $Id$ |
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[2528] | 33 | !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
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[3] | 34 | !!---------------------------------------------------------------------- |
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| 35 | CONTAINS |
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| 36 | |
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| 37 | SUBROUTINE dom_wri |
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| 38 | !!---------------------------------------------------------------------- |
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| 39 | !! *** ROUTINE dom_wri *** |
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| 40 | !! |
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| 41 | !! ** Purpose : Create the NetCDF file(s) which contain(s) all the |
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| 42 | !! ocean domain informations (mesh and mask arrays). This (these) |
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| 43 | !! file(s) is (are) used for visualisation (SAXO software) and |
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| 44 | !! diagnostic computation. |
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| 45 | !! |
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| 46 | !! ** Method : Write in a file all the arrays generated in routines |
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| 47 | !! domhgr, domzgr, and dommsk. Note: the file contain depends on |
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| 48 | !! the vertical coord. used (z-coord, partial steps, s-coord) |
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[1929] | 49 | !! MOD(nmsh, 3) = 1 : 'mesh_mask.nc' file |
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[3] | 50 | !! = 2 : 'mesh.nc' and mask.nc' files |
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[1929] | 51 | !! = 0 : 'mesh_hgr.nc', 'mesh_zgr.nc' and |
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[3] | 52 | !! 'mask.nc' files |
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| 53 | !! For huge size domain, use option 2 or 3 depending on your |
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| 54 | !! vertical coordinate. |
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| 55 | !! |
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[1929] | 56 | !! if nmsh <= 3: write full 3D arrays for e3[tuvw] and gdep[tuvw] |
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| 57 | !! if 3 < nmsh <= 6: write full 3D arrays for e3[tuvw] and 2D arrays |
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[2528] | 58 | !! corresponding to the depth of the bottom t- and w-points |
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[1929] | 59 | !! if 6 < nmsh <= 9: write 2D arrays corresponding to the depth and the |
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[2528] | 60 | !! thickness (e3[tw]_ps) of the bottom points |
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[1929] | 61 | !! |
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[2528] | 62 | !! ** output file : meshmask.nc : domain size, horizontal grid-point position, |
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| 63 | !! masks, depth and vertical scale factors |
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[3] | 64 | !!---------------------------------------------------------------------- |
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[2715] | 65 | USE wrk_nemo, ONLY: wrk_in_use, wrk_not_released |
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| 66 | USE wrk_nemo, ONLY: zprt => wrk_2d_1 , zprw => wrk_2d_2 ! 2D workspace |
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| 67 | USE wrk_nemo, ONLY: zdepu => wrk_3d_1 , zdepv => wrk_3d_2 ! 3D - |
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| 68 | !! |
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[2528] | 69 | INTEGER :: inum0 ! temprary units for 'mesh_mask.nc' file |
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| 70 | INTEGER :: inum1 ! temprary units for 'mesh.nc' file |
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| 71 | INTEGER :: inum2 ! temprary units for 'mask.nc' file |
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| 72 | INTEGER :: inum3 ! temprary units for 'mesh_hgr.nc' file |
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| 73 | INTEGER :: inum4 ! temprary units for 'mesh_zgr.nc' file |
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| 74 | CHARACTER(len=21) :: clnam0 ! filename (mesh and mask informations) |
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| 75 | CHARACTER(len=21) :: clnam1 ! filename (mesh informations) |
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| 76 | CHARACTER(len=21) :: clnam2 ! filename (mask informations) |
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| 77 | CHARACTER(len=21) :: clnam3 ! filename (horizontal mesh informations) |
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| 78 | CHARACTER(len=21) :: clnam4 ! filename (vertical mesh informations) |
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| 79 | INTEGER :: ji, jj, jk ! dummy loop indices |
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[2715] | 80 | !!---------------------------------------------------------------------- |
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[3] | 81 | |
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[2715] | 82 | IF( wrk_in_use(2, 1,2) .OR. wrk_in_use(3, 1,2) )THEN |
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| 83 | CALL ctl_stop('dom_wri: requested workspace arrays unavailable') ; RETURN |
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| 84 | END IF |
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| 85 | |
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[1590] | 86 | IF(lwp) WRITE(numout,*) |
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| 87 | IF(lwp) WRITE(numout,*) 'dom_wri : create NetCDF mesh and mask information file(s)' |
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| 88 | IF(lwp) WRITE(numout,*) '~~~~~~~' |
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| 89 | |
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| 90 | clnam0 = 'mesh_mask' ! filename (mesh and mask informations) |
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| 91 | clnam1 = 'mesh' ! filename (mesh informations) |
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| 92 | clnam2 = 'mask' ! filename (mask informations) |
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| 93 | clnam3 = 'mesh_hgr' ! filename (horizontal mesh informations) |
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| 94 | clnam4 = 'mesh_zgr' ! filename (vertical mesh informations) |
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| 95 | |
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| 96 | SELECT CASE ( MOD(nmsh, 3) ) |
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[1161] | 97 | ! ! ============================ |
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| 98 | CASE ( 1 ) ! create 'mesh_mask.nc' file |
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| 99 | ! ! ============================ |
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| 100 | CALL iom_open( TRIM(clnam0), inum0, ldwrt = .TRUE., kiolib = jprstlib ) |
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| 101 | inum2 = inum0 ! put all the informations |
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| 102 | inum3 = inum0 ! in unit inum0 |
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| 103 | inum4 = inum0 |
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| 104 | |
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| 105 | ! ! ============================ |
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| 106 | CASE ( 2 ) ! create 'mesh.nc' and |
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| 107 | ! ! 'mask.nc' files |
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| 108 | ! ! ============================ |
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| 109 | CALL iom_open( TRIM(clnam1), inum1, ldwrt = .TRUE., kiolib = jprstlib ) |
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| 110 | CALL iom_open( TRIM(clnam2), inum2, ldwrt = .TRUE., kiolib = jprstlib ) |
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| 111 | inum3 = inum1 ! put mesh informations |
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| 112 | inum4 = inum1 ! in unit inum1 |
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| 113 | ! ! ============================ |
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[1590] | 114 | CASE ( 0 ) ! create 'mesh_hgr.nc' |
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[1161] | 115 | ! ! 'mesh_zgr.nc' and |
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| 116 | ! ! 'mask.nc' files |
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| 117 | ! ! ============================ |
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| 118 | CALL iom_open( TRIM(clnam2), inum2, ldwrt = .TRUE., kiolib = jprstlib ) |
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| 119 | CALL iom_open( TRIM(clnam3), inum3, ldwrt = .TRUE., kiolib = jprstlib ) |
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| 120 | CALL iom_open( TRIM(clnam4), inum4, ldwrt = .TRUE., kiolib = jprstlib ) |
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[2528] | 121 | ! |
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[1161] | 122 | END SELECT |
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| 123 | |
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| 124 | ! ! masks (inum2) |
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| 125 | CALL iom_rstput( 0, 0, inum2, 'tmask', tmask, ktype = jp_i1 ) ! ! land-sea mask |
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| 126 | CALL iom_rstput( 0, 0, inum2, 'umask', umask, ktype = jp_i1 ) |
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| 127 | CALL iom_rstput( 0, 0, inum2, 'vmask', vmask, ktype = jp_i1 ) |
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| 128 | CALL iom_rstput( 0, 0, inum2, 'fmask', fmask, ktype = jp_i1 ) |
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| 129 | |
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[2715] | 130 | CALL dom_uniq( zprw, 'T' ) |
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| 131 | zprt = tmask(:,:,1) * zprw ! ! unique point mask |
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[1161] | 132 | CALL iom_rstput( 0, 0, inum2, 'tmaskutil', zprt, ktype = jp_i1 ) |
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[2715] | 133 | CALL dom_uniq( zprw, 'U' ) |
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| 134 | zprt = umask(:,:,1) * zprw |
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[1161] | 135 | CALL iom_rstput( 0, 0, inum2, 'umaskutil', zprt, ktype = jp_i1 ) |
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[2715] | 136 | CALL dom_uniq( zprw, 'V' ) |
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| 137 | zprt = vmask(:,:,1) * zprw |
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[1161] | 138 | CALL iom_rstput( 0, 0, inum2, 'vmaskutil', zprt, ktype = jp_i1 ) |
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[2715] | 139 | CALL dom_uniq( zprw, 'F' ) |
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| 140 | zprt = fmask(:,:,1) * zprw |
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[1161] | 141 | CALL iom_rstput( 0, 0, inum2, 'fmaskutil', zprt, ktype = jp_i1 ) |
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| 142 | |
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| 143 | ! ! horizontal mesh (inum3) |
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| 144 | CALL iom_rstput( 0, 0, inum3, 'glamt', glamt, ktype = jp_r4 ) ! ! latitude |
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| 145 | CALL iom_rstput( 0, 0, inum3, 'glamu', glamu, ktype = jp_r4 ) |
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| 146 | CALL iom_rstput( 0, 0, inum3, 'glamv', glamv, ktype = jp_r4 ) |
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| 147 | CALL iom_rstput( 0, 0, inum3, 'glamf', glamf, ktype = jp_r4 ) |
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| 148 | |
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| 149 | CALL iom_rstput( 0, 0, inum3, 'gphit', gphit, ktype = jp_r4 ) ! ! longitude |
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| 150 | CALL iom_rstput( 0, 0, inum3, 'gphiu', gphiu, ktype = jp_r4 ) |
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| 151 | CALL iom_rstput( 0, 0, inum3, 'gphiv', gphiv, ktype = jp_r4 ) |
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| 152 | CALL iom_rstput( 0, 0, inum3, 'gphif', gphif, ktype = jp_r4 ) |
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| 153 | |
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| 154 | CALL iom_rstput( 0, 0, inum3, 'e1t', e1t, ktype = jp_r8 ) ! ! e1 scale factors |
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| 155 | CALL iom_rstput( 0, 0, inum3, 'e1u', e1u, ktype = jp_r8 ) |
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| 156 | CALL iom_rstput( 0, 0, inum3, 'e1v', e1v, ktype = jp_r8 ) |
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| 157 | CALL iom_rstput( 0, 0, inum3, 'e1f', e1f, ktype = jp_r8 ) |
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| 158 | |
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| 159 | CALL iom_rstput( 0, 0, inum3, 'e2t', e2t, ktype = jp_r8 ) ! ! e2 scale factors |
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| 160 | CALL iom_rstput( 0, 0, inum3, 'e2u', e2u, ktype = jp_r8 ) |
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| 161 | CALL iom_rstput( 0, 0, inum3, 'e2v', e2v, ktype = jp_r8 ) |
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| 162 | CALL iom_rstput( 0, 0, inum3, 'e2f', e2f, ktype = jp_r8 ) |
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| 163 | |
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| 164 | CALL iom_rstput( 0, 0, inum3, 'ff', ff, ktype = jp_r8 ) ! ! coriolis factor |
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| 165 | |
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[2528] | 166 | ! note that mbkt is set to 1 over land ==> use surface tmask |
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| 167 | zprt(:,:) = tmask(:,:,1) * REAL( mbkt(:,:) , wp ) |
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| 168 | CALL iom_rstput( 0, 0, inum4, 'mbathy', zprt, ktype = jp_i2 ) ! ! nb of ocean T-points |
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[1161] | 169 | |
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| 170 | IF( ln_sco ) THEN ! s-coordinate |
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| 171 | CALL iom_rstput( 0, 0, inum4, 'hbatt', hbatt ) ! ! depth |
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| 172 | CALL iom_rstput( 0, 0, inum4, 'hbatu', hbatu ) |
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| 173 | CALL iom_rstput( 0, 0, inum4, 'hbatv', hbatv ) |
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| 174 | CALL iom_rstput( 0, 0, inum4, 'hbatf', hbatf ) |
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[2528] | 175 | ! |
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[1161] | 176 | CALL iom_rstput( 0, 0, inum4, 'gsigt', gsigt ) ! ! scaling coef. |
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| 177 | CALL iom_rstput( 0, 0, inum4, 'gsigw', gsigw ) |
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| 178 | CALL iom_rstput( 0, 0, inum4, 'gsi3w', gsi3w ) |
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| 179 | CALL iom_rstput( 0, 0, inum4, 'esigt', esigt ) |
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| 180 | CALL iom_rstput( 0, 0, inum4, 'esigw', esigw ) |
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[2528] | 181 | ! |
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[1161] | 182 | CALL iom_rstput( 0, 0, inum4, 'e3t', e3t ) ! ! scale factors |
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| 183 | CALL iom_rstput( 0, 0, inum4, 'e3u', e3u ) |
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| 184 | CALL iom_rstput( 0, 0, inum4, 'e3v', e3v ) |
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| 185 | CALL iom_rstput( 0, 0, inum4, 'e3w', e3w ) |
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[2528] | 186 | ! |
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[1161] | 187 | CALL iom_rstput( 0, 0, inum4, 'gdept_0' , gdept_0 ) ! ! stretched system |
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| 188 | CALL iom_rstput( 0, 0, inum4, 'gdepw_0' , gdepw_0 ) |
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| 189 | ENDIF |
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| 190 | |
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| 191 | IF( ln_zps ) THEN ! z-coordinate - partial steps |
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[2528] | 192 | ! |
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[1590] | 193 | IF( nmsh <= 6 ) THEN ! ! 3D vertical scale factors |
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| 194 | CALL iom_rstput( 0, 0, inum4, 'e3t', e3t ) |
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| 195 | CALL iom_rstput( 0, 0, inum4, 'e3u', e3u ) |
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| 196 | CALL iom_rstput( 0, 0, inum4, 'e3v', e3v ) |
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| 197 | CALL iom_rstput( 0, 0, inum4, 'e3w', e3w ) |
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[2528] | 198 | ELSE ! ! 2D masked bottom ocean scale factors |
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| 199 | DO jj = 1,jpj |
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| 200 | DO ji = 1,jpi |
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| 201 | e3tp(ji,jj) = e3t(ji,jj,mbkt(ji,jj)) * tmask(ji,jj,1) |
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| 202 | e3wp(ji,jj) = e3w(ji,jj,mbkt(ji,jj)) * tmask(ji,jj,1) |
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| 203 | END DO |
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| 204 | END DO |
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[1590] | 205 | CALL iom_rstput( 0, 0, inum4, 'e3t_ps', e3tp ) |
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| 206 | CALL iom_rstput( 0, 0, inum4, 'e3w_ps', e3wp ) |
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| 207 | END IF |
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[2528] | 208 | ! |
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[1590] | 209 | IF( nmsh <= 3 ) THEN ! ! 3D depth |
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| 210 | CALL iom_rstput( 0, 0, inum4, 'gdept', gdept, ktype = jp_r4 ) |
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[2528] | 211 | DO jk = 1,jpk |
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| 212 | DO jj = 1, jpjm1 |
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| 213 | DO ji = 1, fs_jpim1 ! vector opt. |
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| 214 | zdepu(ji,jj,jk) = MIN( gdept(ji,jj,jk) , gdept(ji+1,jj ,jk) ) |
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| 215 | zdepv(ji,jj,jk) = MIN( gdept(ji,jj,jk) , gdept(ji ,jj+1,jk) ) |
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| 216 | END DO |
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| 217 | END DO |
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| 218 | END DO |
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[1590] | 219 | CALL lbc_lnk( zdepu, 'U', 1. ) ; CALL lbc_lnk( zdepv, 'V', 1. ) |
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| 220 | CALL iom_rstput( 0, 0, inum4, 'gdepu', zdepu, ktype = jp_r4 ) |
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| 221 | CALL iom_rstput( 0, 0, inum4, 'gdepv', zdepv, ktype = jp_r4 ) |
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| 222 | CALL iom_rstput( 0, 0, inum4, 'gdepw', gdepw, ktype = jp_r4 ) |
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| 223 | ELSE ! ! 2D bottom depth |
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[2528] | 224 | DO jj = 1,jpj |
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| 225 | DO ji = 1,jpi |
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| 226 | zprt(ji,jj) = gdept(ji,jj,mbkt(ji,jj) ) * tmask(ji,jj,1) |
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| 227 | zprw(ji,jj) = gdepw(ji,jj,mbkt(ji,jj)+1) * tmask(ji,jj,1) |
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| 228 | END DO |
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| 229 | END DO |
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| 230 | CALL iom_rstput( 0, 0, inum4, 'hdept', zprt, ktype = jp_r4 ) |
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| 231 | CALL iom_rstput( 0, 0, inum4, 'hdepw', zprw, ktype = jp_r4 ) |
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[1590] | 232 | ENDIF |
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[2528] | 233 | ! |
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[1161] | 234 | CALL iom_rstput( 0, 0, inum4, 'gdept_0', gdept_0 ) ! ! reference z-coord. |
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| 235 | CALL iom_rstput( 0, 0, inum4, 'gdepw_0', gdepw_0 ) |
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| 236 | CALL iom_rstput( 0, 0, inum4, 'e3t_0' , e3t_0 ) |
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| 237 | CALL iom_rstput( 0, 0, inum4, 'e3w_0' , e3w_0 ) |
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| 238 | ENDIF |
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| 239 | |
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| 240 | IF( ln_zco ) THEN |
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| 241 | ! ! z-coordinate - full steps |
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| 242 | CALL iom_rstput( 0, 0, inum4, 'gdept_0', gdept_0 ) ! ! depth |
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| 243 | CALL iom_rstput( 0, 0, inum4, 'gdepw_0', gdepw_0 ) |
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| 244 | CALL iom_rstput( 0, 0, inum4, 'e3t_0' , e3t_0 ) ! ! scale factors |
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| 245 | CALL iom_rstput( 0, 0, inum4, 'e3w_0' , e3w_0 ) |
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| 246 | ENDIF |
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| 247 | ! ! ============================ |
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| 248 | ! ! close the files |
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| 249 | ! ! ============================ |
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[1929] | 250 | SELECT CASE ( MOD(nmsh, 3) ) |
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[1161] | 251 | CASE ( 1 ) |
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| 252 | CALL iom_close( inum0 ) |
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| 253 | CASE ( 2 ) |
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| 254 | CALL iom_close( inum1 ) |
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| 255 | CALL iom_close( inum2 ) |
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[1929] | 256 | CASE ( 0 ) |
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[1161] | 257 | CALL iom_close( inum2 ) |
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| 258 | CALL iom_close( inum3 ) |
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| 259 | CALL iom_close( inum4 ) |
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| 260 | END SELECT |
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[2528] | 261 | ! |
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[2715] | 262 | IF( wrk_not_released(2, 1,2) .OR. & |
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| 263 | wrk_not_released(3, 1,2) ) CALL ctl_stop('dom_wri: failed to release workspace arrays') |
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| 264 | ! |
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[1161] | 265 | END SUBROUTINE dom_wri |
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[3] | 266 | |
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| 267 | |
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[2715] | 268 | SUBROUTINE dom_uniq( puniq, cdgrd ) |
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[1161] | 269 | !!---------------------------------------------------------------------- |
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| 270 | !! *** ROUTINE dom_uniq *** |
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| 271 | !! |
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| 272 | !! ** Purpose : identify unique point of a grid (TUVF) |
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| 273 | !! |
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| 274 | !! ** Method : 1) aplly lbc_lnk on an array with different values for each element |
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| 275 | !! 2) check which elements have been changed |
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| 276 | !!---------------------------------------------------------------------- |
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[2715] | 277 | USE wrk_nemo, ONLY: wrk_in_use, wrk_not_released |
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| 278 | USE wrk_nemo, ONLY: ztstref => wrk_2d_3 ! array with different values for each element |
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[2528] | 279 | ! |
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[2715] | 280 | CHARACTER(len=1) , INTENT(in ) :: cdgrd ! |
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| 281 | REAL(wp), DIMENSION(:,:), INTENT(inout) :: puniq ! |
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| 282 | ! |
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| 283 | REAL(wp) :: zshift ! shift value link to the process number |
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| 284 | INTEGER :: ji ! dummy loop indices |
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| 285 | LOGICAL, DIMENSION(SIZE(puniq,1),SIZE(puniq,2),1) :: lldbl ! store whether each point is unique or not |
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[1161] | 286 | !!---------------------------------------------------------------------- |
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[2715] | 287 | |
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| 288 | IF( wrk_in_use(2, 3) ) THEN |
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| 289 | CALL ctl_stop('dom_uniq: requested workspace array unavailable') ; RETURN |
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| 290 | ENDIF |
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| 291 | |
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[1161] | 292 | ! build an array with different values for each element |
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| 293 | ! in mpp: make sure that these values are different even between process |
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| 294 | ! -> apply a shift value according to the process number |
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| 295 | zshift = jpi * jpj * ( narea - 1 ) |
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[2528] | 296 | ztstref(:,:) = RESHAPE( (/ (zshift + REAL(ji,wp), ji = 1, jpi*jpj) /), (/ jpi, jpj /) ) |
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| 297 | ! |
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[1161] | 298 | puniq(:,:) = ztstref(:,:) ! default definition |
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| 299 | CALL lbc_lnk( puniq, cdgrd, 1. ) ! apply boundary conditions |
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| 300 | lldbl(:,:,1) = puniq(:,:) == ztstref(:,:) ! check which values have been changed |
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[2528] | 301 | ! |
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[1161] | 302 | puniq(:,:) = 1. ! default definition |
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| 303 | ! fill only the inner part of the cpu with llbl converted into real |
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[2528] | 304 | puniq(nldi:nlei,nldj:nlej) = REAL( COUNT( lldbl(nldi:nlei,nldj:nlej,:), dim = 3 ) , wp ) |
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| 305 | ! |
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[2715] | 306 | IF( wrk_not_released(2, 3) ) CALL ctl_stop('dom_uniq: failed to release workspace array') |
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| 307 | ! |
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| 308 | END SUBROUTINE dom_uniq |
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[3] | 309 | |
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| 310 | !!====================================================================== |
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| 311 | END MODULE domwri |
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