New URL for NEMO forge!   http://forge.nemo-ocean.eu

Since March 2022 along with NEMO 4.2 release, the code development moved to a self-hosted GitLab.
This present forge is now archived and remained online for history.
sette.sh in utils/CI/sette – NEMO

source: utils/CI/sette/sette.sh

Last change on this file was 15159, checked in by acc, 3 years ago

Some enhancements to SETTE scripts: Added a -N option to sette.sh to set ln_nnogather=.false. (where appropriate) and a -T <TEST_ROOT> option to sette_eval.sh where <TEST_ROOT> is either LONG, SHORT or REPRO (default:LONG). This option determines which set of results to compare between validation sets. In the case of REPRO, the first expanded match will be used for each configuration (e.g. REPRO_4_8)

  • Property svn:executable set to *
File size: 12.4 KB
Line 
1#!/bin/sh
2# initialise user dependent variable
3export cmd=$0 ; export cmdargs=$@
4SETTE_DIR=$(cd $(dirname "$0"); pwd)
5MAIN_DIR=$(dirname $SETTE_DIR)
6export CMPL_CORES=8            # Number of threads to use for compiling
7export SETTE_STG="_ST"         # Base suffix to append to configuration name
8dry_run=0
9NO_REPORT=0
10#
11# controls for some common namelist, run-time options:
12#
13export USING_TIMING='yes'      # Default: yes => set ln_timing=.true.   ; use -T to disable
14export USING_ICEBERGS='yes'    # Default: yes => set ln_icebergs=.true. ; use -i to disable
15export USING_EXTRA_HALO='yes'  # Default: yes => set nn_hls=2           ; use -e to set nn_hls=1
16export USING_COLLECTIVES='yes' # Default: yes => set nn_comm=2          ; use -C to set nn_comm=1
17export USING_NOGATHER='yes'    # Default: yes => set ln_nnogather=.true.; use -N to set ln_nnogather=.false.
18export USING_TILING='yes'      # Default: yes => set ln_tile=.true.     ; use -t to disable
19                               #    Note: yes also ensures nn_hls=2 but -t will not alter nn_hls
20#
21# controls for some common compile-time keys:
22#
23export USING_QCO='yes'         # Default: yes => add key_qco            ; use -q to delete key_qco
24export USING_RK3='no'          # Default: yes => add key_RK3 & key_qco  ; use -Q to delete key_RK3
25export USING_LOOP_FUSION='yes' # Default: yes => add key_loop_fusion    ; use -F to delete key_loop_fusion
26export USING_XIOS='yes'        # Default: yes => add key_xios           ; use -X to delete key_xios
27                               #    Note: changing USING_XIOS may require a change in arch file
28#
29# controls for some common batch-script, run-time options:
30#
31export USING_MPMD='yes'        # Default: yes => run with detached XIOS servers ; use -A to run in attached (SPMD) mode
32                               #    Note: yes also ensures key_xios but -A will not remove it
33export SETTE_SUB_VAL="MAIN"    # Default subdirectory below NEMO_VALIDATION_DIR
34
35# Parse command-line arguments
36if [ $# -gt 0 ]; then
37  while getopts n:x:v:g:cdrshTqQteiACFNX option; do
38     case $option in
39        c) export SETTE_CLEAN_CONFIGS='yes'
40           export SETTE_SYNC_CONFIGS='yes'
41           echo "-c: Configuration ${SETTE_TEST_CONFIGS[@]} will be cleaned; this option enforces also synchronisation"
42           echo "";;
43        d) dry_run=1
44           echo "";;
45        r) NO_REPORT=1
46           echo "";;
47        s) export SETTE_SYNC_CONFIGS='yes'
48           echo "-s: MY_SRC and EXP00 in ${SETTE_TEST_CONFIGS[@]} will be synchronised with the MY_SRC and EXPREF from the reference configuration"
49           echo "";;
50        n) OPTSTR="$OPTARG"
51           OPTSTR="${OPTSTR/ORCA2_SAS_ICE/SAS}"              # Permit either shortened (expected) or full name for SAS
52           OPTSTR="${OPTSTR/AGRIF_DEMO/AGRIF}"               # Permit either shortened (expected) or full name for AGRIF
53           export SETTE_TEST_CONFIGS=(${OPTSTR})
54           echo "=================================="
55           if [ ${#SETTE_TEST_CONFIGS[@]} -gt 1 ]; then
56             echo "-n: Configurations ${SETTE_TEST_CONFIGS[@]} will be tested if they are available"
57           else
58             echo "-n: Configuration ${SETTE_TEST_CONFIGS[@]} will be tested if it is available"
59           fi
60           echo "";;
61        g) case $OPTARG in
62             [0-9,a-z,A-Z] ) echo "-g: Using ${SETTE_STG}${OPTARG} as the configuration suffix";;
63             * ) echo "-g only accepts a single, alphanumeric character. Processing halted"; exit 42;;
64           esac
65           export SETTE_STG=${SETTE_STG}${OPTARG}
66           echo "";;
67        x) export SETTE_TEST_TYPES=(${OPTARG})
68           echo "-x: ${SETTE_TEST_TYPES[@]} tests requested"
69           echo "";;
70        v) export SETTE_SUB_VAL=($OPTARG)
71           echo "-v: $SETTE_SUB_VAL validation sub-directory requested"
72           echo "";;
73        T) export USING_TIMING='no'
74           echo "-T: ln_timing will be set to false"
75           echo "";;
76        t) export USING_TILING='no'
77           echo "-t: ln_tile will be set to false"
78           echo "";;
79        e) export USING_EXTRA_HALO='no'
80           echo "-e: nn_hls will be set to 1"
81           echo "";;
82        i) export USING_ICEBERGS='no'
83           echo "-i: ln_icebergs will be set to false"
84           echo "";;
85        C) export USING_COLLECTIVES='no'
86           echo "-C: nn_comm will be set to 1"
87           echo "";;
88        N) export USING_NOGATHER='no'
89           echo "-N: ln_nnogather will be set to false"
90           echo "";;
91        q) export USING_QCO='no'
92           echo "-q: key_qco and key_linssh will NOT be activated"
93           echo "";;
94        Q) export USING_RK3='no'
95           echo "-Q: key_qco and key_RK3 will not be activated"
96           echo "    This is the curent default for now since RK3 is not ready"
97           echo "";;
98        F) export USING_LOOP_FUSION='no'
99           echo "-F: key_loop_fusion will not be activated"
100           echo "";;
101        X) export USING_XIOS='no'
102           echo "-X: key_xios will not be activated"
103           echo "";;
104        A) export USING_MPMD='no'
105           echo "-A: Tasks will be run in attached (SPMD) mode"
106           echo "";;
107        h | *) echo 'sette.sh with no arguments (in this case all configuration will be tested with default options)'
108               echo '-T to set ln_timing false for all non-AGRIF configurations (default: true)'
109               echo '-t set ln_tile false in all tests that support it (default: true)'
110               echo '-e set nn_hls=1 (default: nn_hls=2)'
111               echo '-i set ln_icebergs false (default: true)'
112               echo '-C set nn_comm=1 (default: nn_comm=2 ==> use MPI3 collective comms)'
113               echo '-N set ln_nnogather false for ORCA2 configurations (default: true)'
114               echo '-q to remove the key_qco key (default: added)'
115               echo '-X to remove the key_xios key (default: added)'
116               echo '-F to remove the key_loop_fusion key (default: added)'
117               echo '-Q to remove the key_RK3 key (currently a null-op since key_RK3 is not used)'
118               echo '-A to run tests in attached (SPMD) mode (default: MPMD with key_xios)'
119               echo '-n "CFG1_to_test CFG2_to_test ..." to test some specific configurations'
120               echo '-x "TEST_type TEST_type ..." to specify particular type(s) of test(s) to run after compilation'
121               echo '              TEST_type choices are: RESTART REPRO CORRUPT PHYSICS - anything else will COMPILE only'
122               echo '-v "subdir" optional validation record subdirectory to be created below NEMO_VALIDATION_DIR'
123               echo '-g "group_suffix" single character suffix to be appended to the standard _ST suffix used'
124               echo '                  for SETTE-built configurations (needed if sette.sh invocations may overlap)'
125               echo '-r to execute without waiting to run sette_rpt.sh at the end (useful for chaining sette.sh invocations)'
126               echo '-d to perform a dryrun to simply report what settings will be used'
127               echo '-c to clean each configuration'
128               echo '-s to synchronise the sette MY_SRC and EXP00 with the reference MY_SRC and EXPREF'; exit 42 ;;
129     esac
130  done
131  shift $((OPTIND - 1))
132fi
133#
134# Option dependency tests
135#
136if [ ${USING_TILING} == "yes" ] ; then
137 if [ ${USING_EXTRA_HALO} == "no" ] ; then
138  while true; do
139      read -p "Tiling requires the extra halo but you have used -e to deselect it. Would you like to reselect it? (y/n)?: " yn
140      case $yn in
141          [Yy]* ) echo "Ok, ignoring the -e option"; USING_EXTRA_HALO="yes"; break;;
142          [Nn]* ) echo "Ok, exiting instead"; exit 42;;
143          * ) echo "Please answer yes or no.";;
144      esac
145  done
146 fi
147fi
148if [ ${USING_LOOP_FUSION} == "yes" ] ; then
149 if [ ${USING_EXTRA_HALO} == "no" ] ; then
150  while true; do
151      read -p "Loop fusion requires the extra halo but you have used -e to deselect it. Would you like to reselect it? (y/n)?: " yn
152      case $yn in
153          [Yy]* ) echo "Ok, ignoring the -e option"; USING_EXTRA_HALO="yes"; break;;
154          [Nn]* ) echo "Ok, exiting instead"; exit 42;;
155          * ) echo "Please answer yes or no.";;
156      esac
157  done
158 fi
159fi
160#
161# Get SETTE parameters
162. ./param.cfg
163
164#
165# Set the common compile keys to add or delete based on command-line arguments:
166#
167export ADD_KEYS="" ; export DEL_KEYS=""
168if [ ${USING_XIOS} == "yes" ] ; then export ADD_KEYS="${ADD_KEYS}key_xios " ; fi
169if [ ${USING_XIOS} == "no" ]  ; then export DEL_KEYS="${DEL_KEYS}key_xios " ; fi
170#
171if [ ${USING_LOOP_FUSION} == "yes" ] ; then export ADD_KEYS="${ADD_KEYS}key_loop_fusion " ; fi
172if [ ${USING_LOOP_FUSION} == "no" ]  ; then export DEL_KEYS="${DEL_KEYS}key_loop_fusion " ; fi
173#
174if [ ${USING_QCO} == "yes" ] ; then export ADD_KEYS="${ADD_KEYS}key_qco " ; fi
175if [ ${USING_QCO} == "no" ]  ; then export DEL_KEYS="${DEL_KEYS}key_qco key_linssh " ; fi
176#
177if [ ${USING_RK3} == "yes" ] ; then export ADD_KEYS="${ADD_KEYS}key_qco key_RK3 " ; fi
178if [ ${USING_RK3} == "no" ]  ; then export DEL_KEYS="${DEL_KEYS}key_RK3 " ; fi
179
180#
181# Set validation record sub-directories (if required)
182#
183if [ ! -d $NEMO_VALIDATION_DIR ] ; then
184 if [ ${dry_run} -eq 0 ] ; then
185  while true; do
186      read -p "$NEMO_VALIDATION_DIR does not exist. Do you wish to create it? " yn
187      case $yn in
188          [Yy]* ) echo "Ok, creating $NEMO_VALIDATION_DIR"; mkdir $NEMO_VALIDATION_DIR; break;;
189          [Nn]* ) echo "Ok, exiting instead"; exit 42;;
190          * ) echo "Please answer yes or no.";;
191      esac
192  done
193 else
194  echo "$NEMO_VALIDATION_DIR does not exist"
195  echo "but this is a dry run so it will not be created"
196 fi
197fi
198if [ ! -d $NEMO_VALIDATION_DIR/$SETTE_SUB_VAL ] && [ ${dry_run} -eq 0 ] ; then
199   mkdir $NEMO_VALIDATION_DIR/$SETTE_SUB_VAL
200fi
201export NEMO_VALIDATION_DIR=$NEMO_VALIDATION_DIR/$SETTE_SUB_VAL
202
203if [ ${#SETTE_TEST_CONFIGS[@]} -eq 0 ]; then
204   echo "=================================="
205   echo "Configurations $TEST_CONFIGS will be tested if they are available"
206fi
207echo "Carrying out the following tests  : ${TEST_TYPES[@]}"
208echo "requested by the command          : "$cmd $cmdargs
209printf "%-33s : %s\n" USING_TIMING $USING_TIMING
210printf "%-33s : %s\n" USING_ICEBERGS $USING_ICEBERGS
211printf "%-33s : %s\n" USING_EXTRA_HALO $USING_EXTRA_HALO
212printf "%-33s : %s\n" USING_TILING $USING_TILING
213printf "%-33s : %s\n" USING_COLLECTIVES $USING_COLLECTIVES
214printf "%-33s : %s\n" USING_NOGATHER $USING_NOGATHER
215printf "%-33s : %s\n" USING_QCO $USING_QCO
216printf "%-33s : %s\n" USING_LOOP_FUSION $USING_LOOP_FUSION
217printf "%-33s : %s\n" USING_XIOS $USING_XIOS
218printf "%-33s : %s\n" USING_MPMD $USING_MPMD
219printf "%-33s : %s\n" USING_RK3 $USING_RK3
220printf "%-33s : %s\n" "Common compile keys to be added" "$ADD_KEYS"
221printf "%-33s : %s\n" "Common compile keys to be deleted" "$DEL_KEYS"
222echo "Validation records to appear under: "$NEMO_VALIDATION_DIR
223echo "=================================="
224echo ""
225#
226# Option compatibility tests
227#
228if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ] ; then echo "Incompatible choices. MPMD mode requires the XIOS server" ; exit ; fi
229
230if [ ${dry_run} -eq 1 ] ; then echo "dryrun only: no tests performed" ; exit ; fi
231
232# run sette on reference configuration
233. ./sette_reference-configurations.sh
234if [[ $? != 0 ]]; then
235   echo ""
236   echo "--------------------------------------------------------------"
237   echo "./sette_cfg-ref.sh didn't finish properly, need investigations"
238   echo "--------------------------------------------------------------"
239   echo ""
240   exit 42
241fi
242
243# run sette on test cases
244. ./sette_test-cases.sh
245if [[ $? != 0 ]]; then
246   echo ""
247   echo "-----------------------------------------------------------------"
248   echo "./sette_test-cases.sh didn't finish properly, need investigations"
249   echo "-----------------------------------------------------------------"
250   echo ""
251   exit 42
252fi
253
254if [ ${NO_REPORT} -ne 0 ] ; then exit ; fi
255# run sette report
256echo ""
257echo "-------------------------------------------------------------"
258echo "./sette_rpt.sh (script will wait all nemo_sette run are done)"
259echo "-------------------------------------------------------------"
260echo ""
261NRUN=999
262NIT=0
263while [[ $NRUN -ne 0 && $nit -le 1080 ]]; do
264   nit=$((nit+1))
265   NRUN=$( ${BATCH_STAT} | grep ${BATCH_NAME} | wc -l ) 
266   if [[ $NRUN -ne 0 ]]; then
267      printf "%-3d %s\r" $NRUN 'nemo_sette runs still in queue or running ...';
268   else
269      printf "%-50s\n" " "
270      . ./sette_rpt.sh
271      exit
272   fi
273   sleep 10
274done
275printf "\n"
276echo ""
277echo "Something wrong happened, it tooks more than 3 hours to run all the sette tests"
278echo ""
Note: See TracBrowser for help on using the repository browser.