New URL for NEMO forge! http://forge.nemo-ocean.eu

Since March 2022 along with NEMO 4.2 release, the code development moved to a self-hosted GitLab.
This present forge is now archived and remained online for history.

sette_test-cases.sh in utils/CI/sette – NEMO

Context Navigation

source: utils/CI/sette/sette_test-cases.sh @ 13881

Last change on this file since 13881 was 13790, checked in by acc, 4 years ago
Add -T option to sette.sh to set ln_timing true for all, non-AGRIF SETTE tests. Also archives timing.output files to the validation directory. Added first attempt at batch files for ARCHER2 (MPMD version still needs some work)
Property svn:executable set to ``*
File size: 33.8 KB

Rev	Line
[9268]	1	#!/bin/bash
	2	############################################################
	3	# Author : Simona Flavoni for NEMO
	4	# Contact: sflod@locean-ipsl.upmc.fr
	5	#
	6	# sette_test-cases.sh : principal script of SET TEsts for NEMO (SETTE)
	7	# : this script : compiles, run and tests TEST_CASES
	8	#
	9	# : TO DO: test if nitend is equal to end of run.stat
	10	# ----------------------------------------------------------------------
	11	# NEMO/SETTE , NEMO Consortium (2018)
	12	# Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
	13	# ----------------------------------------------------------------------
	14	#
	15	#############################################################
	16	#set -vx
	17	set -o posix
	18	#set -u
	19	#set -e
	20	# ===========
	21	# DESCRIPTION
	22	# ===========
	23	#
	24	# Variables to be checked by user:
	25	#
	26	# COMPILER : name of compiler as defined in NEMOGCM/ARCH directory
	27	# BATCH_COMMAND_PAR : name of the command for submitting parallel batch jobs
	28	# BATCH_COMMAND_SEQ : name of the command for submitting sequential batch jobs
	29	# INTERACT_FLAG : flag to run in interactive mode "yes"
	30	# to run in batch mode "no"
	31	# MPIRUN_FLAG : flag to run in parallel (MPI) "yes"
	32	# to run in sequential mode (NB_PROC = 1) "no"
	33	# USING_XIOS : flag to control the activation of key_iomput
	34	# "yes" to compile using key_iomput and link to the external XIOS library
	35	# "no" to compile without key_iomput and link to the old IOIPSL library
	36	# USING_MPMD : flag to control the use of stand-alone IO servers
	37	# requires USING_XIOS="yes"
	38	# "yes" to run in MPMD (detached) mode with stand-alone IO servers
	39	# "no" to run in SPMD (attached) mode without separate IO servers
	40	# NUM_XIOSERVERS : number of stand-alone IO servers to employ
	41	# set to zero if USING_MPMD="no"
	42	#
	43	# Principal script is sette_test-cases.sh, that calls
	44	#
	45	# makenemo : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
[9576]	46	# and links to nemo in ${CONFIG_NAME}/EXP00)
[9268]	47	#
	48	# param.cfg : sets and loads following directories:
[13568]	49	# This will have been run by the parent sette.sh and values exported here
[9268]	50	#
	51	# FORCING_DIR : is the directory for forcing files (tarfile)
	52	# INPUT_DIR : is the directory for input files storing
	53	# TMPDIR : is the temporary directory (if needed)
	54	# NEMO_VALIDATION_DIR : is the validation directory
	55	#
	56	# (NOTE: this file is the same for all configrations to be tested with sette_test-cases.sh)
	57	#
	58	# all_functions.sh : loads functions used by sette (note: new functions can be added here)
	59	# set_namelist : function declared in all_functions that sets namelist parameters
	60	# post_test_tidyup : creates validation storage directory and copies required output files
	61	# (run.stat and ocean.output) in it after execution of test.
	62	#
	63	# VALIDATION tree is:
	64	#
	65	# NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
	66	#
	67	# prepare_exe_dir.sh : defines and creates directory where the test is executed
	68	# execution directory takes name of TEST_NAME defined for every test
	69	# in sette_test-cases.sh. (each test in executed in its own directory)
	70	#
[11161]	71	# set_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
	72	#
	73	# clean_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
	74	# ( not doing it could lead to false positive )
	75	#
[9268]	76	# prepare_job.sh : to generate the script run_job.sh
	77	#
	78	# fcm_job.sh : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
	79	# see sette_test-cases.sh and BATCH_TEMPLATE directory
	80	#
	81	# NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
	82	# can be found paths to the input tar file)
	83	# NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
	84	# directory
	85	# NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
	86	# remain in ${NEW_CONF}/EXP00
	87	#
	88	# NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
	89	# executed commands
	90	#
	91	# NOTE: if sette_test-cases.sh is stopped in output.sette there is written the last command
	92	# executed by sette_test-cases.sh
	93	#
	94	# example use: ./sette_test-cases.sh
	95	#########################################################################################
	96	#
[11161]	97	# LOAD param value
	98	SETTE_DIR=$(cd $(dirname "$0"); pwd)
	99	MAIN_DIR=$(dirname $SETTE_DIR)
[9268]	100
[11161]	101	export BATCH_COMMAND_PAR=${BATCH_CMD}
	102	export BATCH_COMMAND_SEQ=${BATCH_CMD}
[9268]	103	export INTERACT_FLAG="no"
	104	export MPIRUN_FLAG="yes"
	105	#
[13784]	106	export ADD_KEYS=""
	107	export DEL_KEYS=""
[9268]	108	if [ ${USING_XIOS} == "yes" ]
	109	then
[13784]	110	export ADD_KEYS="${ADD_KEYS} key_iomput"
	111	else
	112	export DEL_KEYS="${DEL_KEYS} key_iomput"
[9268]	113	fi
	114	#
[11161]	115	if [ ${ADD_NOSIGNEDZERO} == "yes" ]
	116	then
[13784]	117	export ADD_KEYS="${ADD_KEYS} key_nosignedzero"
	118	else
	119	export DEL_KEYS="${DEL_KEYS} key_nosignedzero"
[11161]	120	fi
	121	#
[9268]	122	# Settings which control the use of stand alone servers (only relevant if using xios)
	123	#
	124	export NUM_XIOSERVERS=4
[11161]	125	export JOB_PREFIX=${JOB_PREFIX_MPMD}
[9268]	126	#
	127	if [ ${USING_MPMD} == "no" ]
	128	then
	129	export NUM_XIOSERVERS=0
[11161]	130	export JOB_PREFIX=${JOB_PREFIX_NOMPMD}
[9268]	131	fi
	132	#
	133	#
[11161]	134	if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ]
[9268]	135	then
	136	echo "Incompatible choices. MPMD mode requires the XIOS server"
	137	exit
	138	fi
	139
	140	# Directory to run the tests
[9602]	141	CONFIG_DIR0=${MAIN_DIR}/cfgs
[9605]	142	TOOLS_DIR=${MAIN_DIR}/tools
[9268]	143
	144	CMP_NAM=${1:-$COMPILER}
	145	# Copy job_batch_COMPILER file for specific compiler into job_batch_template
	146	cd ${SETTE_DIR}
	147	cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template \|\| exit
	148	# Description of configuration tested:
[11161]	149	# OVERFLOW : TEST s-coordinates : (tracers) Advection schemes: FCT2, FCT4, ubs
	150	# & (dynamics) advection schemes: flux form (ubs, centered), vector form (een)
	151	# zps-coordinates : (tracers) Advection schemes: FCT2, FCT4, ubs
	152	# & (dynamics) advection schemes: flux form (ubs, centered), vector form (een, and een + Hollingsworth correction)
	153	# LOCK_EXCHANGE :
	154	# VORTEX :
	155	# ICE_AGRIF :
[13382]	156	# ISOMIP+ :
[9744]	157	# WAD
[9268]	158
[13568]	159	for config in ${TEST_CONFIGS[@]}
[9268]	160	do
	161
[9524]	162	# ---------
	163	# OVERFLOW
	164	# ---------
[13568]	165	if [ ${config} == "OVERFLOW" ] && [ ${DO_RESTART} == "1" ] ; then
[9268]	166	## Restartability tests for OVERFLOW
[13559]	167	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	168	then
	169	ITEND=12
	170	else
	171	ITEND=120
	172	fi
	173	ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
[9268]	174	export TEST_NAME="LONG"
[9708]	175	cd ${MAIN_DIR}
[12569]	176	#
	177	. ${SETTE_DIR}/all_functions.sh
	178	#
	179	clean_config OVERFLOW OVERFLOW_ST 'tests'
	180	#
	181	sync_config OVERFLOW OVERFLOW_ST 'tests'
	182	#
[11497]	183	. ./makenemo -m ${CMP_NAM} -n OVERFLOW_ST -a OVERFLOW -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9268]	184	cd ${SETTE_DIR}
	185	. ./param.cfg
	186	. ./all_functions.sh
	187	. ./prepare_exe_dir.sh
[11161]	188	set_valid_dir
	189	clean_valid_dir
[9268]	190	JOB_FILE=${EXE_DIR}/run_job.sh
	191	NPROC=1
	192	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	193	cd ${EXE_DIR}
	194	set_namelist namelist_cfg cn_exp \"OVF_LONG\"
	195	set_namelist namelist_cfg nn_it000 1
[13559]	196	set_namelist namelist_cfg nn_itend ${ITEND}
	197	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	198	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[13790]	199	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	200	if [ ${USING_MPMD} == "yes" ] ; then
	201	set_xio_using_server iodef.xml true
	202	else
	203	set_xio_using_server iodef.xml false
	204	fi
	205	cd ${SETTE_DIR}
[11161]	206	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	207
	208	cd ${SETTE_DIR}
	209	export TEST_NAME="SHORT"
	210	. ./prepare_exe_dir.sh
[11161]	211	set_valid_dir
	212	clean_valid_dir
[9268]	213	cd ${EXE_DIR}
	214	set_namelist namelist_cfg cn_exp \"OVF_SHORT\"
[13559]	215	set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
	216	set_namelist namelist_cfg nn_itend ${ITEND}
	217	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	218	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9268]	219	set_namelist namelist_cfg ln_rstart .true.
	220	set_namelist namelist_cfg nn_rstctl 2
[13559]	221	set_namelist namelist_cfg cn_ocerst_in \"OVF_LONG_${ITRST}_restart\"
[13790]	222	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	223	if [ ${USING_MPMD} == "yes" ] ; then
	224	set_xio_using_server iodef.xml true
	225	else
	226	set_xio_using_server iodef.xml false
	227	fi
[13559]	228	ln -sf ../LONG/OVF_LONG_${ITRST}_restart.nc .
[9756]	229
[9268]	230	cd ${SETTE_DIR}
[11161]	231	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	232	cd ${SETTE_DIR}
	233	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	234
	235
[13568]	236	fi
	237
	238	if [ ${config} == "OVERFLOW" ] && [ ${DO_PHYOPTS} == "1" ] ; then
[9268]	239	## Test for all advection, vert. coordinates, vector form, flux form: test runability and complete all time steps
	240	## Needed namelist-xxxx for every type of run tested
[13559]	241	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	242	then
	243	ITEND=12
	244	else
	245	ITEND=6120
	246	fi
[9268]	247	cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
	248
	249	for file in $(echo `ls namelist_*_cfg `) ; do
[9963]	250	TEST_NAME=`echo $file \| sed -e "s/namelist_//" \| sed -e "s/_cfg//"`
[9268]	251	TEST_NAME="EXP-${TEST_NAME}"
[9963]	252	if [ ! -d ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME} ] ; then mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME} ; fi
[9268]	253	export TEST_NAME="${TEST_NAME}"
	254	##
	255	cd ${SETTE_DIR}
	256	. ./param.cfg
	257	. ./all_functions.sh
	258	. ./prepare_exe_dir.sh
[11161]	259	set_valid_dir
	260	clean_valid_dir
[9268]	261	JOB_FILE=${EXE_DIR}/run_job.sh
	262	NPROC=1
	263	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	264	cd ${EXE_DIR}
[9963]	265	rm namelist____
	266	cp -pL ${CONFIG_DIR}/${NEW_CONF}/EXP00/$file namelist_cfg
[13559]	267	set_namelist namelist_cfg nn_it000 1
	268	set_namelist namelist_cfg nn_itend ${ITEND}
[13790]	269	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	270	if [ ${USING_MPMD} == "yes" ] ; then
	271	set_xio_using_server iodef.xml true
	272	else
	273	set_xio_using_server iodef.xml false
	274	fi
	275	cd ${SETTE_DIR}
[11161]	276	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	277	cd ${SETTE_DIR}
	278	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	279	##
	280	done
	281	fi
	282
[9524]	283	# --------------
	284	# LOCK_EXCHANGE
	285	# --------------
[13568]	286	if [ ${config} == "LOCK_EXCHANGE" ] && [ ${DO_RESTART} == "1" ] ; then
[9268]	287	## Restartability tests for LOCK_EXCHANGE
[13559]	288	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	289	then
	290	ITEND=12
	291	else
	292	ITEND=120
	293	fi
	294	ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
[9268]	295	export TEST_NAME="LONG"
[9708]	296	cd ${MAIN_DIR}
[12569]	297	#
	298	# syncronisation if target directory/file exist (not done by makenemo)
	299	. ${SETTE_DIR}/all_functions.sh
	300	#
	301	clean_config LOCK_EXCHANGE LOCK_EXCHANGE_ST 'tests'
	302	#
	303	sync_config LOCK_EXCHANGE LOCK_EXCHANGE_ST 'tests'
	304	#
[11497]	305	. ./makenemo -m ${CMP_NAM} -n LOCK_EXCHANGE_ST -a LOCK_EXCHANGE -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9268]	306	cd ${SETTE_DIR}
	307	. ./param.cfg
	308	. ./all_functions.sh
	309	. ./prepare_exe_dir.sh
[11161]	310	set_valid_dir
	311	clean_valid_dir
[9268]	312	JOB_FILE=${EXE_DIR}/run_job.sh
	313	NPROC=1
	314	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	315	cd ${EXE_DIR}
	316	set_namelist namelist_cfg cn_exp \"LOCK_LONG\"
	317	set_namelist namelist_cfg nn_it000 1
[13559]	318	set_namelist namelist_cfg nn_itend ${ITEND}
	319	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	320	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[13790]	321	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	322	if [ ${USING_MPMD} == "yes" ] ; then
	323	set_xio_using_server iodef.xml true
	324	else
	325	set_xio_using_server iodef.xml false
	326	fi
	327	cd ${SETTE_DIR}
[11161]	328	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	329
	330	cd ${SETTE_DIR}
	331	export TEST_NAME="SHORT"
	332	. ./prepare_exe_dir.sh
[11161]	333	set_valid_dir
	334	clean_valid_dir
[9268]	335	cd ${EXE_DIR}
	336	set_namelist namelist_cfg cn_exp \"LOCK_SHORT\"
[13559]	337	set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
	338	set_namelist namelist_cfg nn_itend ${ITEND}
	339	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	340	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9268]	341	set_namelist namelist_cfg ln_rstart .true.
	342	set_namelist namelist_cfg nn_rstctl 2
[13559]	343	set_namelist namelist_cfg cn_ocerst_in \"LOCK_LONG_${ITRST}_restart\"
[13790]	344	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	345	if [ ${USING_MPMD} == "yes" ] ; then
	346	set_xio_using_server iodef.xml true
	347	else
	348	set_xio_using_server iodef.xml false
	349	fi
[13559]	350	ln -sf ../LONG/LOCK_LONG_${ITRST}_restart.nc .
[9756]	351
[9268]	352	cd ${SETTE_DIR}
[11161]	353	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	354	cd ${SETTE_DIR}
	355	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	356
[13568]	357	fi
	358
	359	if [ ${config} == "LOCK_EXCHANGE" ] && [ ${DO_PHYOPTS} == "1" ] ; then
[9268]	360	## Test for all advection, vector form, flux form: test runability and complete all time steps
	361	## Needed namelist-xxxx for every type of run tested
[13568]	362	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	363	then
	364	ITEND=12
	365	else
	366	ITEND=61200
	367	fi
[9268]	368	cd ${CONFIG_DIR}/${NEW_CONF}/EXP00
	369
	370	for file in $(echo `ls namelist_*_cfg `) ; do
[10242]	371	echo ''
	372	TEST_NAME=`echo $file \| sed -e "s/namelist_//" \| sed -e "s/_cfg//"`
[9268]	373	TEST_NAME="EXP-${TEST_NAME}"
	374	`mkdir ${CONFIG_DIR}/${NEW_CONF}/${TEST_NAME}`
	375	export TEST_NAME="${TEST_NAME}"
[10242]	376	##
[9268]	377	cd ${SETTE_DIR}
	378	. ./param.cfg
	379	. ./all_functions.sh
	380	. ./prepare_exe_dir.sh
[11161]	381	set_valid_dir
	382	clean_valid_dir
[9268]	383	JOB_FILE=${EXE_DIR}/run_job.sh
	384	NPROC=1
	385	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	386	cd ${EXE_DIR}
[10242]	387	rm namelist____
	388	cp -pL ${CONFIG_DIR}/${NEW_CONF}/EXP00/$file namelist_cfg
[13790]	389	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[13568]	390	set_namelist namelist_cfg nn_it000 1
	391	set_namelist namelist_cfg nn_itend ${ITEND}
[9268]	392	if [ ${USING_MPMD} == "yes" ] ; then
	393	set_xio_using_server iodef.xml true
	394	else
	395	set_xio_using_server iodef.xml false
	396	fi
	397	cd ${SETTE_DIR}
[11161]	398	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	399	cd ${SETTE_DIR}
	400	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[10242]	401	##
	402	echo ''
[9268]	403	done
	404	fi
	405
[9524]	406	# ---------
	407	# VORTEX
	408	# ---------
[13568]	409	if [ ${config} == "VORTEX" ] && [ ${DO_RESTART} == "1" ] ; then
[9756]	410	## Restartability tests for VORTEX
[13559]	411	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	412	then
	413	ITEND=12
	414	else
	415	ITEND=240
	416	fi
	417	ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
	418	ITRST_1=$( printf "%08d" $(( ${ITEND} * 3 / 2 )) )
[9268]	419	export TEST_NAME="LONG"
[9708]	420	cd ${MAIN_DIR}
[12569]	421	#
	422	# syncronisation if target directory/file exist (not done by makenemo)
	423	. ${SETTE_DIR}/all_functions.sh
	424	#
	425	clean_config VORTEX VORTEX_ST 'tests'
	426	#
	427	sync_config VORTEX VORTEX_ST 'tests'
	428	#
[11497]	429	. ./makenemo -m ${CMP_NAM} -n VORTEX_ST -a VORTEX -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9268]	430	cd ${SETTE_DIR}
	431	. ./param.cfg
	432	. ./all_functions.sh
	433	. ./prepare_exe_dir.sh
[11161]	434	set_valid_dir
	435	clean_valid_dir
[9268]	436	JOB_FILE=${EXE_DIR}/run_job.sh
[9756]	437	NPROC=6
	438	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[9268]	439	cd ${EXE_DIR}
	440	set_namelist namelist_cfg cn_exp \"VORTEX_LONG\"
	441	set_namelist namelist_cfg nn_it000 1
[13559]	442	set_namelist namelist_cfg nn_itend ${ITEND}
	443	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
	444	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[10433]	445
[9756]	446	set_namelist 1_namelist_cfg cn_exp \"VORTEX_LONG\"
	447	set_namelist 1_namelist_cfg nn_it000 1
[13559]	448	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	449	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
[10575]	450	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[10433]	451
[13790]	452	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	453	if [ ${USING_MPMD} == "yes" ] ; then
[9756]	454	set_xio_using_server iodef.xml true
[9268]	455	else
[9756]	456	set_xio_using_server iodef.xml false
[9268]	457	fi
	458	cd ${SETTE_DIR}
[11161]	459	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9756]	460
[9268]	461	cd ${SETTE_DIR}
	462	export TEST_NAME="SHORT"
	463	. ./prepare_exe_dir.sh
[11161]	464	set_valid_dir
	465	clean_valid_dir
[9268]	466	cd ${EXE_DIR}
	467	set_namelist namelist_cfg cn_exp \"VORTEX_SHORT\"
[13559]	468	set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
	469	set_namelist namelist_cfg nn_itend ${ITEND}
	470	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	471	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9268]	472	set_namelist namelist_cfg ln_rstart .true.
	473	set_namelist namelist_cfg nn_rstctl 2
[13559]	474	set_namelist namelist_cfg cn_ocerst_in \"VORTEX_LONG_${ITRST}_restart\"
[9756]	475
	476	set_namelist 1_namelist_cfg cn_exp \"VORTEX_SHORT\"
[13559]	477	set_namelist 1_namelist_cfg nn_it000 $(( ${ITEND} * 3 / 2 + 1 ))
	478	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	479	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
[10575]	480	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9756]	481	set_namelist 1_namelist_cfg ln_rstart .true.
	482	set_namelist 1_namelist_cfg nn_rstctl 2
[13559]	483	set_namelist 1_namelist_cfg cn_ocerst_in \"VORTEX_LONG_${ITRST_1}_restart\"
[9756]	484
[13790]	485	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	486	if [ ${USING_MPMD} == "yes" ] ; then
[9756]	487	set_xio_using_server iodef.xml true
	488	else
	489	set_xio_using_server iodef.xml false
	490	fi
	491	if [ $NPROC -eq 1 ] ; then
[13559]	492	ln -sf ../LONG/VORTEX_LONG_${ITRST}_restart.nc .
	493	ln -sf ../LONG/1_VORTEX_LONG_${ITRST_1}_restart.nc .
[9756]	494	else
	495	for (( i=1; i<=$NPROC; i++)) ; do
	496	L_NPROC=$(( $i - 1 ))
	497	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[13559]	498	ln -sf ../LONG/VORTEX_LONG_${ITRST}_restart_${L_NPROC}.nc .
	499	ln -sf ../LONG/1_VORTEX_LONG_${ITRST_1}_restart_${L_NPROC}.nc .
[9756]	500	done
	501	fi
	502	cd ${SETTE_DIR}
[11161]	503	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9756]	504	cd ${SETTE_DIR}
	505	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[13568]	506	fi
[9756]	507
[13568]	508	if [ ${config} == "VORTEX" ] && [ ${DO_REPRO} == "1" ] ; then
	509
[9756]	510	## Reproducibility tests for VORTEX
	511	export TEST_NAME="REPRO_2_3"
	512	cd ${MAIN_DIR}
	513	cd ${SETTE_DIR}
	514	. ./param.cfg
	515	. ./all_functions.sh
	516	. ./prepare_exe_dir.sh
[11161]	517	set_valid_dir
	518	clean_valid_dir
[9756]	519	JOB_FILE=${EXE_DIR}/run_job.sh
	520	NPROC=6
	521	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	522	cd ${EXE_DIR}
	523	set_namelist namelist_cfg cn_exp \"VORTEX_23\"
	524	set_namelist namelist_cfg nn_it000 1
[13559]	525	set_namelist namelist_cfg nn_itend ${ITEND}
	526	set_namelist namelist_cfg nn_stock ${ITEND}
[9756]	527	set_namelist namelist_cfg jpni 2
	528	set_namelist namelist_cfg jpnj 3
[10575]	529	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[10427]	530
[9756]	531	set_namelist 1_namelist_cfg cn_exp \"VORTEX_23\"
	532	set_namelist 1_namelist_cfg nn_it000 1
[13559]	533	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	534	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 ))
[9756]	535	set_namelist 1_namelist_cfg jpni 2
	536	set_namelist 1_namelist_cfg jpnj 3
[10575]	537	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9756]	538
[13790]	539	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9756]	540	if [ ${USING_MPMD} == "yes" ] ; then
[9268]	541	set_xio_using_server iodef.xml true
	542	else
	543	set_xio_using_server iodef.xml false
	544	fi
[9756]	545	cd ${SETTE_DIR}
[11161]	546	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9756]	547	cd ${SETTE_DIR}
	548	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	549
	550	cd ${SETTE_DIR}
	551	export TEST_NAME="REPRO_3_2"
	552	. ./prepare_exe_dir.sh
[11161]	553	set_valid_dir
	554	clean_valid_dir
[9756]	555	JOB_FILE=${EXE_DIR}/run_job.sh
	556	NPROC=6
	557	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	558	cd ${EXE_DIR}
	559
	560	set_namelist namelist_cfg cn_exp \"VORTEX_32\"
	561	set_namelist namelist_cfg nn_it000 1
[13559]	562	set_namelist namelist_cfg nn_itend ${ITEND}
	563	set_namelist namelist_cfg nn_stock ${ITEND}
[9756]	564	set_namelist namelist_cfg jpni 3
	565	set_namelist namelist_cfg jpnj 2
[10575]	566	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[10427]	567
[9756]	568	set_namelist 1_namelist_cfg cn_exp \"VORTEX_32\"
	569	set_namelist 1_namelist_cfg nn_it000 1
[13559]	570	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	571	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 ))
[9756]	572	set_namelist 1_namelist_cfg jpni 3
	573	set_namelist 1_namelist_cfg jpnj 2
[10575]	574	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[10427]	575
[13790]	576	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9268]	577	if [ ${USING_MPMD} == "yes" ] ; then
	578	set_xio_using_server iodef.xml true
	579	else
	580	set_xio_using_server iodef.xml false
	581	fi
	582	cd ${SETTE_DIR}
[11161]	583	. ./prepare_job.sh input_EMPTY.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9268]	584	cd ${SETTE_DIR}
	585	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	586
	587	fi
	588
[9458]	589
[9524]	590	# ---------
[10517]	591	# ICE_AGRIF
[9524]	592	# ---------
[13568]	593	if [ ${config} == "ICE_AGRIF" ] && [ ${DO_RESTART} == "1" ] ; then
[10517]	594	## Restartability tests for ICE_AGRIF
[13559]	595	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	596	then
	597	ITEND=10
	598	else
	599	ITEND=200
	600	fi
	601	ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
	602	ITRST_1=$( printf "%08d" $(( ${ITEND} * 3 / 2 )) )
[9458]	603	export TEST_NAME="LONG"
[9708]	604	cd ${MAIN_DIR}
[12569]	605	#
	606	# syncronisation if target directory/file exist (not done by makenemo)
	607	. ${SETTE_DIR}/all_functions.sh
	608	#
	609	clean_config ICE_AGRIF ICE_AGRIF_ST 'tests'
	610	#
	611	sync_config ICE_AGRIF ICE_AGRIF_ST 'tests'
	612	#
[11497]	613	. ./makenemo -m ${CMP_NAM} -n ICE_AGRIF_ST -a ICE_AGRIF -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9458]	614	cd ${SETTE_DIR}
	615	. ./param.cfg
	616	. ./all_functions.sh
	617	. ./prepare_exe_dir.sh
[11161]	618	set_valid_dir
	619	clean_valid_dir
[9458]	620	JOB_FILE=${EXE_DIR}/run_job.sh
[9756]	621	NPROC=6
[9458]	622	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	623	cd ${EXE_DIR}
[10517]	624	set_namelist namelist_cfg cn_exp \"ICE_AGRIF_LONG\"
[9458]	625	set_namelist namelist_cfg nn_it000 1
[13559]	626	set_namelist namelist_cfg nn_itend ${ITEND}
	627	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	628	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9458]	629
[10517]	630	set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_LONG\"
[9458]	631	set_namelist 1_namelist_cfg nn_it000 1
[13559]	632	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	633	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
[10575]	634	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9458]	635
[13790]	636	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9458]	637	if [ ${USING_MPMD} == "yes" ] ; then
	638	set_xio_using_server iodef.xml true
	639	else
	640	set_xio_using_server iodef.xml false
	641	fi
	642	cd ${SETTE_DIR}
[11161]	643	. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9458]	644
	645	cd ${SETTE_DIR}
	646	export TEST_NAME="SHORT"
	647	. ./prepare_exe_dir.sh
[11161]	648	set_valid_dir
	649	clean_valid_dir
[9458]	650	cd ${EXE_DIR}
[10517]	651	set_namelist namelist_cfg cn_exp \"ICE_AGRIF_SHORT\"
[13559]	652	set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
	653	set_namelist namelist_cfg nn_itend ${ITEND}
	654	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[10575]	655	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9458]	656	set_namelist namelist_cfg ln_rstart .true.
	657	set_namelist namelist_cfg nn_rstctl 2
[13559]	658	set_namelist namelist_cfg cn_ocerst_in \"ICE_AGRIF_LONG_${ITRST}_restart\"
	659	set_namelist namelist_ice_cfg cn_icerst_in \"ICE_AGRIF_LONG_${ITRST}_restart_ice\"
[9458]	660
[10517]	661	set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_SHORT\"
[13559]	662	set_namelist 1_namelist_cfg nn_it000 $(( ${ITEND} * 3 / 2 + 1 ))
	663	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	664	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
[10575]	665	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9458]	666	set_namelist 1_namelist_cfg ln_rstart .true.
	667	set_namelist 1_namelist_cfg nn_rstctl 2
[13559]	668	set_namelist 1_namelist_cfg cn_ocerst_in \"ICE_AGRIF_LONG_${ITRST_1}_restart\"
	669	set_namelist 1_namelist_ice_cfg cn_icerst_in \"ICE_AGRIF_LONG_${ITRST_1}_restart_ice\"
[9458]	670
	671
[13790]	672	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9458]	673	if [ ${USING_MPMD} == "yes" ] ; then
	674	set_xio_using_server iodef.xml true
	675	else
	676	set_xio_using_server iodef.xml false
	677	fi
	678	if [ $NPROC -eq 1 ] ; then
[13559]	679	ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart.nc .
	680	ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart_ice.nc .
	681	ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart.nc .
	682	ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart_ice.nc .
[9458]	683	else
	684	for (( i=1; i<=$NPROC; i++)) ; do
	685	L_NPROC=$(( $i - 1 ))
	686	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[13559]	687	ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart_${L_NPROC}.nc .
	688	ln -sf ../LONG/ICE_AGRIF_LONG_${ITRST}_restart_ice_${L_NPROC}.nc .
	689	ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart_${L_NPROC}.nc .
	690	ln -sf ../LONG/1_ICE_AGRIF_LONG_${ITRST_1}_restart_ice_${L_NPROC}.nc .
[9458]	691	done
	692	fi
[9756]	693
	694	cd ${SETTE_DIR}
[11161]	695	. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9756]	696	cd ${SETTE_DIR}
	697	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	698
[13568]	699	fi
[9756]	700
[13568]	701	if [ ${config} == "ICE_AGRIF" ] && [ ${DO_REPRO} == "1" ] ; then
	702
[10517]	703	## Reproducibility tests for ICE_AGRIF
[9756]	704	export TEST_NAME="REPRO_2_3"
	705	cd ${MAIN_DIR}
	706	cd ${SETTE_DIR}
	707	. ./param.cfg
	708	. ./all_functions.sh
	709	. ./prepare_exe_dir.sh
[11161]	710	set_valid_dir
	711	clean_valid_dir
[9756]	712	JOB_FILE=${EXE_DIR}/run_job.sh
	713	NPROC=6
	714	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	715	cd ${EXE_DIR}
[10517]	716	set_namelist namelist_cfg cn_exp \"ICE_AGRIF_23\"
[9756]	717	set_namelist namelist_cfg nn_it000 1
[13559]	718	set_namelist namelist_cfg nn_itend ${ITEND}
	719	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[9756]	720	set_namelist namelist_cfg jpni 2
	721	set_namelist namelist_cfg jpnj 3
[10575]	722	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9756]	723
[10517]	724	set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_23\"
[9756]	725	set_namelist 1_namelist_cfg nn_it000 1
[13559]	726	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	727	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
[9756]	728	set_namelist 1_namelist_cfg jpni 2
	729	set_namelist 1_namelist_cfg jpnj 3
[10575]	730	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9756]	731
[13790]	732	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9458]	733	if [ ${USING_MPMD} == "yes" ] ; then
[9756]	734	set_xio_using_server iodef.xml true
[9458]	735	else
[9756]	736	set_xio_using_server iodef.xml false
[9458]	737	fi
[9756]	738	cd ${SETTE_DIR}
[11161]	739	. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9756]	740	cd ${SETTE_DIR}
	741	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	742
	743	cd ${SETTE_DIR}
	744	export TEST_NAME="REPRO_3_2"
	745	. ./prepare_exe_dir.sh
[11161]	746	set_valid_dir
	747	clean_valid_dir
[9756]	748	JOB_FILE=${EXE_DIR}/run_job.sh
	749	NPROC=6
	750	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	751	cd ${EXE_DIR}
	752
[10517]	753	set_namelist namelist_cfg cn_exp \"ICE_AGRIF_32\"
[9756]	754	set_namelist namelist_cfg nn_it000 1
[13559]	755	set_namelist namelist_cfg nn_itend ${ITEND}
	756	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[9756]	757	set_namelist namelist_cfg jpni 3
	758	set_namelist namelist_cfg jpnj 2
[10575]	759	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9756]	760
[10517]	761	set_namelist 1_namelist_cfg cn_exp \"ICE_AGRIF_32\"
[9756]	762	set_namelist 1_namelist_cfg nn_it000 1
[13559]	763	set_namelist 1_namelist_cfg nn_itend $(( ${ITEND} * 3 ))
	764	set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} * 3 / 2 ))
[9756]	765	set_namelist 1_namelist_cfg jpni 3
	766	set_namelist 1_namelist_cfg jpnj 2
[10575]	767	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9756]	768
[13790]	769	#if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9458]	770	if [ ${USING_MPMD} == "yes" ] ; then
[9756]	771	set_xio_using_server iodef.xml true
[9458]	772	else
[9756]	773	set_xio_using_server iodef.xml false
[9458]	774	fi
	775	cd ${SETTE_DIR}
[11161]	776	. ./prepare_job.sh input_ICE_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9458]	777	cd ${SETTE_DIR}
	778	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[9756]	779
[9458]	780	fi
	781
[9518]	782	# ------
[13382]	783	# ISOMIP+
[9518]	784	# ------
[13568]	785	if [ ${config} == "ISOMIP+" ] && [ ${DO_RESTART} == "1" ] ; then
[9518]	786	## Restartability tests
[13559]	787	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	788	then
	789	ITEND=12
	790	else
	791	ITEND=1200
	792	fi
	793	ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
[9518]	794	export TEST_NAME="LONG"
[9708]	795	cd ${MAIN_DIR}
[12569]	796	#
	797	# syncronisation if target directory/file exist (not done by makenemo)
	798	. ${SETTE_DIR}/all_functions.sh
	799	#
[13382]	800	clean_config ISOMIP+ ISOMIP+_ST 'tests'
[12569]	801	#
[13382]	802	sync_config ISOMIP+ ISOMIP+_ST 'tests'
[12569]	803	#
[13382]	804	. ./makenemo -m ${CMP_NAM} -n ISOMIP+_ST -a ISOMIP+ -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9518]	805	cd ${SETTE_DIR}
	806	. ./param.cfg
	807	. ./all_functions.sh
	808	. ./prepare_exe_dir.sh
[11161]	809	set_valid_dir
	810	clean_valid_dir
[9518]	811	JOB_FILE=${EXE_DIR}/run_job.sh
[13382]	812	NPROC=27
[9518]	813	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	814	cd ${EXE_DIR}
[13382]	815	set_namelist namelist_cfg cn_exp \"ISOMIP+_LONG\"
[9518]	816	set_namelist namelist_cfg nn_it000 1
[13559]	817	set_namelist namelist_cfg nn_itend ${ITEND}
	818	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[13382]	819	set_namelist namelist_cfg jpni 9
[9518]	820	set_namelist namelist_cfg jpnj 3
[10575]	821	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[13790]	822	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9518]	823	if [ ${USING_MPMD} == "yes" ] ; then
	824	set_xio_using_server iodef.xml true
	825	else
	826	set_xio_using_server iodef.xml false
	827	fi
	828	cd ${SETTE_DIR}
[13382]	829	. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9518]	830
	831	cd ${SETTE_DIR}
	832	export TEST_NAME="SHORT"
	833	. ./prepare_exe_dir.sh
[11161]	834	set_valid_dir
	835	clean_valid_dir
[9518]	836	cd ${EXE_DIR}
[13382]	837	set_namelist namelist_cfg cn_exp \"ISOMIP+_SHORT\"
[13559]	838	set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
	839	set_namelist namelist_cfg nn_itend ${ITEND}
	840	set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
[9518]	841	set_namelist namelist_cfg ln_rstart .true.
	842	set_namelist namelist_cfg nn_rstctl 2
[13382]	843	set_namelist namelist_cfg jpni 9
[9518]	844	set_namelist namelist_cfg jpnj 3
[10575]	845	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[13559]	846	set_namelist namelist_cfg cn_ocerst_in \"ISOMIP+_LONG_${ITRST}_restart\"
[13790]	847	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9518]	848	if [ ${USING_MPMD} == "yes" ] ; then
	849	set_xio_using_server iodef.xml true
	850	else
	851	set_xio_using_server iodef.xml false
	852	fi
	853	for (( i=1; i<=$NPROC; i++)) ; do
	854	L_NPROC=$(( $i - 1 ))
	855	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[13559]	856	ln -sf ../LONG/ISOMIP+_LONG_${ITRST}_restart_${L_NPROC}.nc .
[9518]	857	done
[9756]	858
[9518]	859	cd ${SETTE_DIR}
[13382]	860	. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9518]	861	cd ${SETTE_DIR}
	862	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	863
[13568]	864	fi
	865
	866	if [ ${config} == "ISOMIP+" ] && [ ${DO_REPRO} == "1" ] ; then
[9518]	867	## Reproducibility tests
[13559]	868	if [ $( echo ${CMP_NAM} \| grep -ic debug ) -eq 1 ]
	869	then
	870	ITEND=12
	871	else
	872	ITEND=600
	873	fi
[13382]	874	export TEST_NAME="REPRO_9_3"
[9708]	875	cd ${MAIN_DIR}
[9518]	876	cd ${SETTE_DIR}
	877	. ./param.cfg
	878	. ./all_functions.sh
	879	. ./prepare_exe_dir.sh
[11161]	880	set_valid_dir
	881	clean_valid_dir
[9518]	882	JOB_FILE=${EXE_DIR}/run_job.sh
[13382]	883	NPROC=27
[9518]	884	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	885	cd ${EXE_DIR}
[13382]	886	set_namelist namelist_cfg cn_exp \"ISOMIP+_93\"
[9518]	887	set_namelist namelist_cfg nn_it000 1
[13559]	888	set_namelist namelist_cfg nn_itend ${ITEND}
[13382]	889	set_namelist namelist_cfg jpni 9
[9518]	890	set_namelist namelist_cfg jpnj 3
[10575]	891	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[13790]	892	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9518]	893	if [ ${USING_MPMD} == "yes" ] ; then
	894	set_xio_using_server iodef.xml true
	895	else
	896	set_xio_using_server iodef.xml false
	897	fi
	898	cd ${SETTE_DIR}
[13382]	899	. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9518]	900	cd ${SETTE_DIR}
	901	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	902
	903	cd ${SETTE_DIR}
	904	export TEST_NAME="REPRO_8_4"
	905	. ./prepare_exe_dir.sh
[11161]	906	set_valid_dir
	907	clean_valid_dir
[9518]	908	JOB_FILE=${EXE_DIR}/run_job.sh
	909	NPROC=32
	910	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	911	cd ${EXE_DIR}
[13382]	912	set_namelist namelist_cfg cn_exp \"ISOMIP+_84\"
[9518]	913	set_namelist namelist_cfg nn_it000 1
[13559]	914	set_namelist namelist_cfg nn_itend ${ITEND}
[9518]	915	set_namelist namelist_cfg jpni 8
	916	set_namelist namelist_cfg jpnj 4
[10575]	917	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[13790]	918	if [ ${SETTE_TIMING} == "yes" ] ; then set_namelist namelist_cfg ln_timing .true. ; fi
[9518]	919	if [ ${USING_MPMD} == "yes" ] ; then
	920	set_xio_using_server iodef.xml true
	921	else
	922	set_xio_using_server iodef.xml false
	923	fi
	924	cd ${SETTE_DIR}
[13382]	925	. ./prepare_job.sh input_ISOMIP+.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9518]	926	cd ${SETTE_DIR}
	927	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	928
	929	fi
	930
[9458]	931	#----
[9268]	932	done
[13568]	933	#
	934	# Return to SETTE_DIR (last fcm_job.sh will have moved to EXE_DIR)
	935	cd ${SETTE_DIR}

Note: See TracBrowser for help on using the repository browser.

Download in other formats: