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sette_reference-configurations.sh in utils/CI/sette_ticket2304 – NEMO

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source: utils/CI/sette_ticket2304/sette_reference-configurations.sh @ 12422

Last change on this file since 12422 was 12422, checked in by mathiot, 4 years ago
merge sync_mysrc and sync_expcfg into sync_config, add a clean_config function and add option in sette.sh to activate synchronisation of MY_SCR/EXPREF with CONFIG_ST/EXP00/MY_SRC (-s option) or to clean a config with makenemo clean (-c option)
Property svn:executable set to ``*
File size: 62.5 KB

Rev	Line
[3520]	1	#!/bin/bash
[3708]	2	############################################################
[3520]	3	# Author : Simona Flavoni for NEMO
[4245]	4	# Contact: sflod@locean-ipsl.upmc.fr
	5	# 2013 : A.C. Coward added options for testing with XIOS in dettached mode
[3520]	6	#
	7	# sette.sh : principal script of SET TEsts for NEMO (SETTE)
	8	# ----------------------------------------------------------------------
	9	# NEMO/SETTE , NEMO Consortium (2010)
	10	# Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt)
	11	# ----------------------------------------------------------------------
	12	#
	13	#############################################################
[7744]	14	#set -vx
[3520]	15	set -o posix
	16	#set -u
	17	#set -e
[4245]	18	# ===========
[3520]	19	# DESCRIPTION
	20	# ===========
	21	#
	22	# Variables to be checked by user:
	23	#
[4245]	24	# COMPILER : name of compiler as defined in NEMOGCM/ARCH directory
	25	# BATCH_COMMAND_PAR : name of the command for submitting parallel batch jobs
	26	# BATCH_COMMAND_SEQ : name of the command for submitting sequential batch jobs
	27	# INTERACT_FLAG : flag to run in interactive mode "yes"
	28	# to run in batch mode "no"
	29	# MPIRUN_FLAG : flag to run in parallel (MPI) "yes"
	30	# to run in sequential mode (NB_PROC = 1) "no"
	31	# USING_XIOS : flag to control the activation of key_iomput
	32	# "yes" to compile using key_iomput and link to the external XIOS library
	33	# "no" to compile without key_iomput and link to the old IOIPSL library
	34	# USING_MPMD : flag to control the use of stand-alone IO servers
	35	# requires USING_XIOS="yes"
	36	# "yes" to run in MPMD (detached) mode with stand-alone IO servers
	37	# "no" to run in SPMD (attached) mode without separate IO servers
	38	# NUM_XIOSERVERS : number of stand-alone IO servers to employ
	39	# set to zero if USING_MPMD="no"
[3520]	40	#
	41	# Principal script is sette.sh, that calls
	42	#
[4245]	43	# makenemo : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
[9576]	44	# and links to nemo in ${CONFIG_NAME}/EXP00)
[3520]	45	#
	46	# param.cfg : sets and loads following directories:
	47	#
[4245]	48	# FORCING_DIR : is the directory for forcing files (tarfile)
	49	# INPUT_DIR : is the directory for input files storing
	50	# TMPDIR : is the temporary directory (if needed)
[3520]	51	# NEMO_VALIDATION_DIR : is the validation directory
	52	#
	53	# (NOTE: this file is the same for all configrations to be tested with sette)
	54	#
[4245]	55	# all_functions.sh : loads functions used by sette (note: new functions can be added here)
	56	# set_namelist : function declared in all_functions that sets namelist parameters
	57	# post_test_tidyup : creates validation storage directory and copies required output files
[9019]	58	# (run.stat and ocean.output) in it after execution of test.
[3520]	59	#
[4245]	60	# VALIDATION tree is:
[3520]	61	#
	62	# NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
	63	#
	64	# prepare_exe_dir.sh : defines and creates directory where the test is executed
[4245]	65	# execution directory takes name of TEST_NAME defined for every test
	66	# in sette.sh. (each test in executed in its own directory)
[3520]	67	#
[10755]	68	# set_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
	69	#
[10698]	70	# clean_valid_dir : rename ocean.output/run.stat and tracer.stat to avoid checking them in the report
	71	# ( not doing it could lead to false positive )
	72	#
[4245]	73	# prepare_job.sh : to generate the script run_job.sh
[3520]	74	#
[4245]	75	# fcm_job.sh : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
	76	# see sette.sh and BATCH_TEMPLATE directory
[3520]	77	#
[4245]	78	# NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
	79	# can be found paths to the input tar file)
	80	# NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
	81	# directory
	82	# NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
	83	# remain in ${NEW_CONF}/EXP00
[3520]	84	#
[4245]	85	# NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
	86	# executed commands
[3520]	87	#
[4245]	88	# NOTE: if sette.sh is stopped in output.sette there is written the last command
	89	# executed by sette.sh
[3520]	90	#
[4245]	91	# example use: ./sette.sh
	92	#########################################################################################
[3520]	93	#
[10687]	94	# LOAD param value
[10717]	95	SETTE_DIR=$(cd $(dirname "$0"); pwd)
	96	MAIN_DIR=$(dirname $SETTE_DIR)
[10687]	97	. ./param.cfg
[7743]	98
[10687]	99	export BATCH_COMMAND_PAR=${BATCH_CMD}
	100	export BATCH_COMMAND_SEQ=${BATCH_CMD}
[4990]	101	export INTERACT_FLAG="no"
[4245]	102	export MPIRUN_FLAG="yes"
[9941]	103	export USING_ICEBERGS="yes"
[3520]	104	#
[4245]	105	export DEL_KEYS="key_iomput"
	106	if [ ${USING_XIOS} == "yes" ]
	107	then
	108	export DEL_KEYS=""
	109	fi
[3520]	110	#
[10687]	111	export ADD_KEYS=""
	112	if [ ${ADD_NOSIGNEDZERO} == "yes" ]
	113	then
	114	export ADD_KEYS="key_nosignedzero"
	115	fi
	116	#
[4245]	117	# Settings which control the use of stand alone servers (only relevant if using xios)
[3520]	118	#
[10632]	119	export NUM_XIOSERVERS=4
[11140]	120	export JOB_PREFIX=${JOB_PREFIX_MPMD}
[3520]	121	#
[4245]	122	if [ ${USING_MPMD} == "no" ]
	123	then
	124	export NUM_XIOSERVERS=0
[11140]	125	export JOB_PREFIX=${JOB_PREFIX_NOMPMD}
[4245]	126	fi
[3520]	127	#
	128	#
[10573]	129	if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no" ]
[4245]	130	then
	131	echo "Incompatible choices. MPMD mode requires the XIOS server"
	132	exit
	133	fi
[3520]	134
	135	# Directory to run the tests
[9602]	136	CONFIG_DIR0=${MAIN_DIR}/cfgs
	137	TOOLS_DIR=${MAIN_DIR}/tools
[3520]	138
	139	CMP_NAM=${1:-$COMPILER}
	140	# Copy job_batch_COMPILER file for specific compiler into job_batch_template
	141	cd ${SETTE_DIR}
[4245]	142	cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template \|\| exit
[10747]	143	# Description of available configurations:
	144	# GYRE_PISCES :
	145	# ORCA2_ICE_PISCES :
	146	# ORCA2_OFF_PISCES :
	147	# AMM12 :
	148	# SAS :
	149	# ORCA2_ICE_OBS :
	150	# AGRIF : test AGRIF in a double zoom configuration in the nordic seas + 1 zoom in the eq. Pacific (AGRIF_DEMO)
	151	# and check that key_agrif without zoom = no key_agrif
	152	# SPITZ12 : regional configuration including sea-ice and tides (Spitzbergen)
[4147]	153
[10747]	154	for config in ${TEST_CONFIGS}
[3520]	155	do
	156
[9518]	157	# -----------
	158	# GYRE_PISCES
	159	# -----------
[10747]	160	if [ ${config} == "GYRE_PISCES" ] ; then
[9518]	161	## Restartability tests for GYRE_PISCES
[3520]	162	export TEST_NAME="LONG"
[9658]	163	cd ${MAIN_DIR}
[12289]	164	#
	165	# syncronisation if target directory/file exist (not done by makenemo)
	166	. ${SETTE_DIR}/all_functions.sh
[12422]	167	sync_config GYRE_PISCES GYRE_PISCES_ST 'cfgs'
	168	clean_config GYRE_PISCES GYRE_PISCES_ST 'cfgs'
[12289]	169	#
[11497]	170	. ./makenemo -m ${CMP_NAM} -n GYRE_PISCES_ST -r GYRE_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]	171	cd ${SETTE_DIR}
[4252]	172	. ./param.cfg
	173	. ./all_functions.sh
	174	. ./prepare_exe_dir.sh
[10755]	175	set_valid_dir
[10698]	176	clean_valid_dir
[3520]	177	JOB_FILE=${EXE_DIR}/run_job.sh
[9525]	178	NPROC=8
[4245]	179	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]	180	cd ${EXE_DIR}
[7715]	181	set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\"
[4147]	182	set_namelist namelist_cfg nn_it000 1
[9560]	183	set_namelist namelist_cfg nn_itend 1080
	184	set_namelist namelist_cfg nn_stock 540
[7646]	185	set_namelist namelist_cfg ln_linssh .true.
[9525]	186	set_namelist namelist_cfg jpni 2
	187	set_namelist namelist_cfg jpnj 4
[10573]	188	set_namelist namelist_cfg ln_ctl .false.
	189	set_namelist namelist_cfg sn_cfctl%l_config .true.
	190	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	191	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]	192	if [ ${USING_MPMD} == "yes" ] ; then
	193	set_xio_using_server iodef.xml true
	194	else
	195	set_xio_using_server iodef.xml false
	196	fi
	197	cd ${SETTE_DIR}
[10755]	198	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	199
	200	cd ${SETTE_DIR}
	201	export TEST_NAME="SHORT"
[4252]	202	. ./prepare_exe_dir.sh
[10755]	203	set_valid_dir
[10698]	204	clean_valid_dir
[3520]	205	cd ${EXE_DIR}
[7715]	206	set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\"
[9560]	207	set_namelist namelist_cfg nn_it000 541
	208	set_namelist namelist_cfg nn_itend 1080
	209	set_namelist namelist_cfg nn_stock 540
[4147]	210	set_namelist namelist_cfg ln_rstart .true.
	211	set_namelist namelist_cfg nn_rstctl 2
[7646]	212	set_namelist namelist_cfg ln_linssh .true.
[9525]	213	set_namelist namelist_cfg jpni 2
	214	set_namelist namelist_cfg jpnj 4
[10573]	215	set_namelist namelist_cfg ln_ctl .false.
	216	set_namelist namelist_cfg sn_cfctl%l_config .true.
	217	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	218	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[7744]	219	set_namelist namelist_top_cfg ln_rsttr .true.
	220	set_namelist namelist_top_cfg nn_rsttr 2
[9560]	221	set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000540_restart\"
	222	set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_00000540_restart_trc\"
[4245]	223	if [ ${USING_MPMD} == "yes" ] ; then
	224	set_xio_using_server iodef.xml true
	225	else
	226	set_xio_using_server iodef.xml false
	227	fi
[3537]	228	for (( i=1; i<=$NPROC; i++)) ; do
	229	L_NPROC=$(( $i - 1 ))
	230	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9560]	231	ln -sf ../LONG/GYREPIS_LONG_00000540_restart_${L_NPROC}.nc .
	232	ln -sf ../LONG/GYREPIS_LONG_00000540_restart_trc_${L_NPROC}.nc .
[3537]	233	done
[3520]	234	cd ${SETTE_DIR}
[10755]	235	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	236	cd ${SETTE_DIR}
[3532]	237	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	238
[9518]	239	## Reproducibility tests for GYRE_PISCES
[9525]	240	export TEST_NAME="REPRO_2_4"
[9658]	241	cd ${MAIN_DIR}
[3520]	242	cd ${SETTE_DIR}
[4252]	243	. ./param.cfg
	244	. ./all_functions.sh
	245	. ./prepare_exe_dir.sh
[10755]	246	set_valid_dir
[10698]	247	clean_valid_dir
[3520]	248	JOB_FILE=${EXE_DIR}/run_job.sh
[9525]	249	NPROC=8
[4245]	250	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	251	cd ${EXE_DIR}
[7715]	252	set_namelist namelist_cfg cn_exp \"GYREPIS_48\"
[4147]	253	set_namelist namelist_cfg nn_it000 1
[9560]	254	set_namelist namelist_cfg nn_itend 1080
[7646]	255	set_namelist namelist_cfg ln_linssh .true.
[9525]	256	set_namelist namelist_cfg jpni 2
	257	set_namelist namelist_cfg jpnj 4
[10573]	258	set_namelist namelist_cfg ln_ctl .false.
	259	set_namelist namelist_cfg sn_cfctl%l_config .true.
	260	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	261	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]	262	if [ ${USING_MPMD} == "yes" ] ; then
	263	set_xio_using_server iodef.xml true
	264	else
	265	set_xio_using_server iodef.xml false
	266	fi
[3520]	267	cd ${SETTE_DIR}
[10755]	268	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	269	cd ${SETTE_DIR}
	270	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	271
	272	cd ${SETTE_DIR}
[9525]	273	export TEST_NAME="REPRO_4_2"
[4252]	274	. ./prepare_exe_dir.sh
[10755]	275	set_valid_dir
[10698]	276	clean_valid_dir
[3680]	277	JOB_FILE=${EXE_DIR}/run_job.sh
[9525]	278	NPROC=8
[4245]	279	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	280	cd ${EXE_DIR}
[7715]	281	set_namelist namelist_cfg cn_exp \"GYREPIS_84\"
[4147]	282	set_namelist namelist_cfg nn_it000 1
[9560]	283	set_namelist namelist_cfg nn_itend 1080
[7646]	284	set_namelist namelist_cfg ln_linssh .true.
[9525]	285	set_namelist namelist_cfg jpni 4
	286	set_namelist namelist_cfg jpnj 2
[10573]	287	set_namelist namelist_cfg ln_ctl .false.
	288	set_namelist namelist_cfg sn_cfctl%l_config .true.
	289	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	290	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[4245]	291	if [ ${USING_MPMD} == "yes" ] ; then
	292	set_xio_using_server iodef.xml true
	293	else
	294	set_xio_using_server iodef.xml false
	295	fi
[3520]	296	cd ${SETTE_DIR}
[10755]	297	. ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	298	cd ${SETTE_DIR}
	299	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3532]	300
[3520]	301	fi
	302
[9518]	303	# -----------------
[9663]	304	# ORCA2_ICE_PISCES
[9518]	305	# -----------------
[10747]	306	if [ ${config} == "ORCA2_ICE_PISCES" ] ; then
[9663]	307	## Restartability tests for ORCA2_ICE_PISCES
[7646]	308	export TEST_NAME="LONG"
[9658]	309	cd ${MAIN_DIR}
[12289]	310	#
	311	# syncronisation if target directory/file exist (not done by makenemo)
	312	. ${SETTE_DIR}/all_functions.sh
[12422]	313	sync_config ORCA2_ICE_PISCES ORCA2_ICE_PISCES_ST 'cfgs'
	314	clean_config ORCA2_ICE_PISCES ORCA2_ICE_PISCES_ST 'cfgs'
[12289]	315	#
[11497]	316	. ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_PISCES_ST -r ORCA2_ICE_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[7646]	317	cd ${SETTE_DIR}
	318	. ./param.cfg
	319	. ./all_functions.sh
	320	. ./prepare_exe_dir.sh
[10755]	321	set_valid_dir
[10698]	322	clean_valid_dir
[7646]	323	JOB_FILE=${EXE_DIR}/run_job.sh
	324	NPROC=32
	325	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	326	cd ${EXE_DIR}
	327	set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
	328	set_namelist namelist_cfg nn_it000 1
[10750]	329	set_namelist namelist_cfg nn_itend 992
	330	set_namelist namelist_cfg nn_stock 496
[7646]	331	set_namelist namelist_cfg jpni 4
	332	set_namelist namelist_cfg jpnj 8
[10573]	333	set_namelist namelist_cfg ln_ctl .false.
	334	set_namelist namelist_cfg sn_cfctl%l_config .true.
	335	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	336	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9933]	337	set_namelist namelist_cfg ln_use_calving .true.
[10189]	338	set_namelist namelist_cfg ln_wave .true.
	339	set_namelist namelist_cfg ln_cdgw .true.
	340	set_namelist namelist_cfg ln_sdw .true.
	341	set_namelist namelist_cfg nn_sdrift 1
	342	set_namelist namelist_cfg ln_stcor .true.
	343	set_namelist namelist_cfg ln_tauwoc .true.
[9904]	344	#
	345	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]	346	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
[9904]	347	#
[9019]	348	set_namelist namelist_ice_cfg ln_icediachk .true.
[4147]	349	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	350	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	351	# if not you need input files, and for tests is not necessary
[4147]	352	set_namelist namelist_pisces_cfg ln_presatm .false.
	353	set_namelist namelist_pisces_cfg ln_varpar .false.
	354	set_namelist namelist_pisces_cfg ln_dust .false.
	355	set_namelist namelist_pisces_cfg ln_solub .false.
	356	set_namelist namelist_pisces_cfg ln_river .false.
	357	set_namelist namelist_pisces_cfg ln_ndepo .false.
	358	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	359	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	360	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[9203]	361	# put ln_pisdmp to false : no restoring to global mean value
	362	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	363	if [ ${USING_MPMD} == "yes" ] ; then
	364	set_xio_using_server iodef.xml true
	365	else
	366	set_xio_using_server iodef.xml false
	367	fi
[3520]	368	cd ${SETTE_DIR}
[10755]	369	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3532]	370
	371	cd ${SETTE_DIR}
[3520]	372	export TEST_NAME="SHORT"
[4252]	373	. ./prepare_exe_dir.sh
[10755]	374	set_valid_dir
[10698]	375	clean_valid_dir
[3520]	376	cd ${EXE_DIR}
[7646]	377	set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
[10750]	378	set_namelist namelist_cfg nn_it000 497
	379	set_namelist namelist_cfg nn_itend 992
	380	set_namelist namelist_cfg nn_stock 496
[4147]	381	set_namelist namelist_cfg ln_rstart .true.
	382	set_namelist namelist_cfg nn_rstctl 2
[7646]	383	set_namelist namelist_cfg jpni 4
	384	set_namelist namelist_cfg jpnj 8
[10573]	385	set_namelist namelist_cfg ln_ctl .false.
	386	set_namelist namelist_cfg sn_cfctl%l_config .true.
	387	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	388	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9920]	389	set_namelist namelist_cfg nn_test_icebergs -1
[10189]	390	set_namelist namelist_cfg ln_wave .true.
	391	set_namelist namelist_cfg ln_cdgw .true.
	392	set_namelist namelist_cfg ln_sdw .true.
	393	set_namelist namelist_cfg nn_sdrift 1
	394	set_namelist namelist_cfg ln_stcor .true.
	395	set_namelist namelist_cfg ln_tauwoc .true.
[9904]	396	#
	397	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10732]	398	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
[9904]	399	#
[9933]	400	set_namelist namelist_ice_cfg ln_icediachk .true.
[4147]	401	set_namelist namelist_top_cfg ln_rsttr .true.
	402	set_namelist namelist_top_cfg nn_rsttr 2
[10750]	403	set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000496_restart\"
	404	set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000496_restart_trc\"
	405	set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000496_restart_ice\"
[9933]	406	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	407	# put ln_ironsed, ln_river, ln_ndepo, ln_dust
	408	# if not you need input files, and for tests is not necessary
[4147]	409	set_namelist namelist_pisces_cfg ln_presatm .false.
	410	set_namelist namelist_pisces_cfg ln_varpar .false.
	411	set_namelist namelist_pisces_cfg ln_dust .false.
	412	set_namelist namelist_pisces_cfg ln_solub .false.
	413	set_namelist namelist_pisces_cfg ln_river .false.
	414	set_namelist namelist_pisces_cfg ln_ndepo .false.
	415	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	416	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	417	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	418	# put ln_pisdmp to false : no restoring to global mean value
[4147]	419	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[3537]	420	for (( i=1; i<=$NPROC; i++)) ; do
	421	L_NPROC=$(( $i - 1 ))
	422	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[10750]	423	ln -sf ../LONG/O2L3P_LONG_00000496_restart_${L_NPROC}.nc .
	424	ln -sf ../LONG/O2L3P_LONG_00000496_restart_trc_${L_NPROC}.nc .
	425	ln -sf ../LONG/O2L3P_LONG_00000496_restart_ice_${L_NPROC}.nc .
[9904]	426	if [ ${USING_ICEBERGS} == "yes" ]
	427	then
[10750]	428	ln -sf ../LONG/O2L3P_LONG_icebergs_00000496_restart_${L_NPROC}.nc O2L3P_LONG_00000496_restart_icebergs_${L_NPROC}.nc
[9904]	429	fi
[3537]	430	done
[4245]	431	if [ ${USING_MPMD} == "yes" ] ; then
	432	set_xio_using_server iodef.xml true
	433	else
	434	set_xio_using_server iodef.xml false
	435	fi
[3520]	436	cd ${SETTE_DIR}
[10755]	437	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	438	cd ${SETTE_DIR}
[3532]	439	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	440
[9663]	441	## Reproducibility tests for ORCA2_ICE_PISCES
[7646]	442	export TEST_NAME="REPRO_4_8"
[9658]	443	cd ${MAIN_DIR}
[3520]	444	cd ${SETTE_DIR}
[4252]	445	. ./param.cfg
	446	. ./all_functions.sh
	447	. ./prepare_exe_dir.sh
[10755]	448	set_valid_dir
[10698]	449	clean_valid_dir
[3520]	450	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	451	NPROC=32
[4245]	452	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	453	cd ${EXE_DIR}
[9019]	454	set_namelist namelist_cfg cn_exp \"O2L3P_48\"
[4147]	455	set_namelist namelist_cfg nn_it000 1
[10750]	456	set_namelist namelist_cfg nn_itend 992
[4147]	457	set_namelist namelist_cfg jpni 4
[7646]	458	set_namelist namelist_cfg jpnj 8
[10573]	459	set_namelist namelist_cfg ln_ctl .false.
	460	set_namelist namelist_cfg sn_cfctl%l_config .true.
	461	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	462	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[10189]	463	set_namelist namelist_cfg ln_wave .true.
	464	set_namelist namelist_cfg ln_cdgw .true.
	465	set_namelist namelist_cfg ln_sdw .true.
	466	set_namelist namelist_cfg nn_sdrift 1
	467	set_namelist namelist_cfg ln_stcor .true.
	468	set_namelist namelist_cfg ln_tauwoc .true.
	469
[9904]	470	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]	471	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
	472
[4147]	473	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	474	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	475	# if not you need input files, and for tests is not necessary
[4147]	476	set_namelist namelist_pisces_cfg ln_presatm .false.
	477	set_namelist namelist_pisces_cfg ln_varpar .false.
	478	set_namelist namelist_pisces_cfg ln_dust .false.
	479	set_namelist namelist_pisces_cfg ln_solub .false.
	480	set_namelist namelist_pisces_cfg ln_river .false.
	481	set_namelist namelist_pisces_cfg ln_ndepo .false.
	482	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	483	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	484	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	485	# put ln_pisdmp to false : no restoring to global mean value
[4147]	486	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	487	if [ ${USING_MPMD} == "yes" ] ; then
	488	set_xio_using_server iodef.xml true
	489	else
	490	set_xio_using_server iodef.xml false
	491	fi
[3520]	492	cd ${SETTE_DIR}
[10755]	493	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	494	cd ${SETTE_DIR}
[3532]	495	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	496
	497	cd ${SETTE_DIR}
[7646]	498	export TEST_NAME="REPRO_8_4"
[4252]	499	. ./prepare_exe_dir.sh
[10755]	500	set_valid_dir
[10698]	501	clean_valid_dir
[3680]	502	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	503	NPROC=32
[4245]	504	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	505	cd ${EXE_DIR}
[9019]	506	set_namelist namelist_cfg cn_exp \"O2L3P_84\"
[4147]	507	set_namelist namelist_cfg nn_it000 1
[10750]	508	set_namelist namelist_cfg nn_itend 992
[7646]	509	set_namelist namelist_cfg jpni 8
	510	set_namelist namelist_cfg jpnj 4
[10573]	511	set_namelist namelist_cfg ln_ctl .false.
	512	set_namelist namelist_cfg sn_cfctl%l_config .true.
	513	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	514	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[10189]	515	set_namelist namelist_cfg ln_wave .true.
	516	set_namelist namelist_cfg ln_cdgw .true.
	517	set_namelist namelist_cfg ln_sdw .true.
	518	set_namelist namelist_cfg nn_sdrift 1
	519	set_namelist namelist_cfg ln_stcor .true.
	520	set_namelist namelist_cfg ln_tauwoc .true.
[10687]	521
[9904]	522	if [ ${USING_ICEBERGS} == "no" ] ; then set_namelist namelist_cfg ln_icebergs .false. ; fi
[10687]	523	# for debugging purposes set_namelist namelist_cfg rn_test_box -180.0, 180.0, -90.0, -55.0
	524
[4147]	525	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	526	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	527	# if not you need input files, and for tests is not necessary
[4147]	528	set_namelist namelist_pisces_cfg ln_presatm .false.
	529	set_namelist namelist_pisces_cfg ln_varpar .false.
	530	set_namelist namelist_pisces_cfg ln_dust .false.
	531	set_namelist namelist_pisces_cfg ln_solub .false.
	532	set_namelist namelist_pisces_cfg ln_river .false.
	533	set_namelist namelist_pisces_cfg ln_ndepo .false.
	534	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	535	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	536	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	537	# put ln_pisdmp to false : no restoring to global mean value
[4147]	538	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	539	if [ ${USING_MPMD} == "yes" ] ; then
	540	set_xio_using_server iodef.xml true
	541	else
	542	set_xio_using_server iodef.xml false
	543	fi
[3520]	544	cd ${SETTE_DIR}
[10755]	545	. ./prepare_job.sh input_ORCA2_ICE_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	546	cd ${SETTE_DIR}
	547	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	548	fi
	549
[9518]	550	# ----------------
	551	# ORCA2_OFF_PISCES
	552	# ----------------
[10747]	553	if [ ${config} == "ORCA2_OFF_PISCES" ] ; then
[9518]	554	## Restartability tests for ORCA2_OFF_PISCES
[3520]	555	export TEST_NAME="LONG"
[9658]	556	cd ${MAIN_DIR}
[12289]	557	#
	558	# syncronisation if target directory/file exist (not done by makenemo)
	559	. ${SETTE_DIR}/all_functions.sh
[12422]	560	sync_config ORCA2_OFF_PISCES ORCA2_OFF_PISCES_ST 'cfgs'
	561	clean_config ORCA2_OFF_PISCES ORCA2_OFF_PISCES_ST 'cfgs'
[12289]	562	#
[11497]	563	. ./makenemo -m ${CMP_NAM} -n ORCA2_OFF_PISCES_ST -r ORCA2_OFF_PISCES -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]	564	cd ${SETTE_DIR}
[4252]	565	. ./param.cfg
	566	. ./all_functions.sh
	567	. ./prepare_exe_dir.sh
[10755]	568	set_valid_dir
[10698]	569	clean_valid_dir
[3520]	570	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	571	NPROC=32
[4245]	572	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	573	cd ${EXE_DIR}
[4147]	574	set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
	575	set_namelist namelist_cfg nn_it000 1
[9560]	576	set_namelist namelist_cfg nn_itend 380
	577	set_namelist namelist_cfg nn_stock 190
[7646]	578	set_namelist namelist_cfg jpni 4
	579	set_namelist namelist_cfg jpnj 8
[10573]	580	set_namelist namelist_cfg ln_ctl .false.
	581	set_namelist namelist_cfg sn_cfctl%l_config .true.
	582	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	583	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	584	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	585	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	586	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	587	# if not you need input files, and for tests is not necessary
[4147]	588	set_namelist namelist_pisces_cfg ln_presatm .false.
	589	set_namelist namelist_pisces_cfg ln_varpar .false.
	590	set_namelist namelist_pisces_cfg ln_dust .false.
	591	set_namelist namelist_pisces_cfg ln_solub .false.
	592	set_namelist namelist_pisces_cfg ln_river .false.
	593	set_namelist namelist_pisces_cfg ln_ndepo .false.
	594	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	595	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	596	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	597	# put ln_pisdmp to false : no restoring to global mean value
[4147]	598	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	599	if [ ${USING_MPMD} == "yes" ] ; then
	600	set_xio_using_server iodef.xml true
	601	else
	602	set_xio_using_server iodef.xml false
	603	fi
[3520]	604	cd ${SETTE_DIR}
[10755]	605	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	606
	607	cd ${SETTE_DIR}
	608	export TEST_NAME="SHORT"
[4252]	609	. ./prepare_exe_dir.sh
[10755]	610	set_valid_dir
[10698]	611	clean_valid_dir
[3520]	612	cd ${EXE_DIR}
[4147]	613	set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
[9560]	614	set_namelist namelist_cfg nn_it000 191
	615	set_namelist namelist_cfg nn_itend 380
	616	set_namelist namelist_cfg nn_stock 190
[7646]	617	set_namelist namelist_cfg jpni 4
	618	set_namelist namelist_cfg jpnj 8
[10573]	619	set_namelist namelist_cfg ln_ctl .false.
	620	set_namelist namelist_cfg sn_cfctl%l_config .true.
	621	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	622	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	623	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	624	set_namelist namelist_top_cfg ln_rsttr .true.
	625	set_namelist namelist_top_cfg nn_rsttr 2
[9560]	626	set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000190_restart_trc\"
[3537]	627	for (( i=1; i<=$NPROC; i++)) ; do
	628	L_NPROC=$(( $i - 1 ))
	629	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9560]	630	ln -sf ../LONG/OFFP_LONG_00000190_restart_trc_${L_NPROC}.nc .
[3537]	631	done
[3520]	632	# put ln_ironsed, ln_river, ln_ndepo, ln_dust
	633	# if not you need input files, and for tests is not necessary
[4147]	634	set_namelist namelist_pisces_cfg ln_presatm .false.
	635	set_namelist namelist_pisces_cfg ln_varpar .false.
	636	set_namelist namelist_pisces_cfg ln_dust .false.
	637	set_namelist namelist_pisces_cfg ln_solub .false.
	638	set_namelist namelist_pisces_cfg ln_river .false.
	639	set_namelist namelist_pisces_cfg ln_ndepo .false.
	640	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	641	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	642	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	643	# put ln_pisdmp to false : no restoring to global mean value
[4147]	644	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	645	if [ ${USING_MPMD} == "yes" ] ; then
	646	set_xio_using_server iodef.xml true
	647	else
	648	set_xio_using_server iodef.xml false
	649	fi
[3520]	650	cd ${SETTE_DIR}
[10755]	651	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	652	cd ${SETTE_DIR}
	653	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	654
[9518]	655	## Reproducibility tests for ORCA2_OFF_PISCES
[7646]	656	export TEST_NAME="REPRO_4_8"
[9658]	657	cd ${MAIN_DIR}
[3520]	658	cd ${SETTE_DIR}
[4252]	659	. ./param.cfg
	660	. ./all_functions.sh
	661	. ./prepare_exe_dir.sh
[10755]	662	set_valid_dir
[10698]	663	clean_valid_dir
[3520]	664	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	665	NPROC=32
[4245]	666	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	667	cd ${EXE_DIR}
[9019]	668	set_namelist namelist_cfg cn_exp \"OFFP_48\"
[4147]	669	set_namelist namelist_cfg nn_it000 1
[9560]	670	set_namelist namelist_cfg nn_itend 380
[4147]	671	set_namelist namelist_cfg jpni 4
[7646]	672	set_namelist namelist_cfg jpnj 8
[10573]	673	set_namelist namelist_cfg ln_ctl .false.
	674	set_namelist namelist_cfg sn_cfctl%l_config .true.
	675	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	676	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	677	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	678	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	679	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	680	# if not you need input files, and for tests is not necessary
[4147]	681	set_namelist namelist_pisces_cfg ln_presatm .false.
	682	set_namelist namelist_pisces_cfg ln_varpar .false.
	683	set_namelist namelist_pisces_cfg ln_dust .false.
	684	set_namelist namelist_pisces_cfg ln_solub .false.
	685	set_namelist namelist_pisces_cfg ln_river .false.
	686	set_namelist namelist_pisces_cfg ln_ndepo .false.
	687	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	688	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	689	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	690	# put ln_pisdmp to false : no restoring to global mean value
[4147]	691	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	692	if [ ${USING_MPMD} == "yes" ] ; then
	693	set_xio_using_server iodef.xml true
	694	else
	695	set_xio_using_server iodef.xml false
	696	fi
[3520]	697	cd ${SETTE_DIR}
[10755]	698	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	699	cd ${SETTE_DIR}
[3532]	700	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	701
	702	cd ${SETTE_DIR}
[7646]	703	export TEST_NAME="REPRO_8_4"
[4252]	704	. ./prepare_exe_dir.sh
[10755]	705	set_valid_dir
[10698]	706	clean_valid_dir
[3680]	707	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	708	NPROC=32
[4245]	709	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	710	cd ${EXE_DIR}
[9019]	711	set_namelist namelist_cfg cn_exp \"OFFP_84\"
[4147]	712	set_namelist namelist_cfg nn_it000 1
[9560]	713	set_namelist namelist_cfg nn_itend 380
[7646]	714	set_namelist namelist_cfg jpni 8
	715	set_namelist namelist_cfg jpnj 4
[10573]	716	set_namelist namelist_cfg ln_ctl .false.
	717	set_namelist namelist_cfg sn_cfctl%l_config .true.
	718	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	719	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[9904]	720	set_namelist namelist_cfg ln_qsr_rgb .true.
[4147]	721	set_namelist namelist_top_cfg ln_trcdta .false.
[3520]	722	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	723	# if not you need input files, and for tests is not necessary
[4147]	724	set_namelist namelist_pisces_cfg ln_presatm .false.
	725	set_namelist namelist_pisces_cfg ln_varpar .false.
	726	set_namelist namelist_pisces_cfg ln_dust .false.
	727	set_namelist namelist_pisces_cfg ln_solub .false.
	728	set_namelist namelist_pisces_cfg ln_river .false.
	729	set_namelist namelist_pisces_cfg ln_ndepo .false.
	730	set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]	731	set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]	732	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]	733	# put ln_pisdmp to false : no restoring to global mean value
[4147]	734	set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]	735	if [ ${USING_MPMD} == "yes" ] ; then
	736	set_xio_using_server iodef.xml true
	737	else
	738	set_xio_using_server iodef.xml false
	739	fi
[3520]	740	cd ${SETTE_DIR}
[10755]	741	. ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	742	cd ${SETTE_DIR}
	743	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	744	fi
	745
[9518]	746	# -----
	747	# AMM12
	748	# -----
[10747]	749	if [ ${config} == "AMM12" ] ; then
[3532]	750	## Restartability tests for AMM12
	751	export TEST_NAME="LONG"
[9658]	752	cd ${MAIN_DIR}
[12289]	753	#
	754	# syncronisation if target directory/file exist (not done by makenemo)
	755	. ${SETTE_DIR}/all_functions.sh
[12422]	756	sync_config AMM12 AMM12_ST 'cfgs'
	757	clean_config AMM12 AMM12_ST 'cfgs'
[12289]	758	#
[11497]	759	. ./makenemo -m ${CMP_NAM} -n AMM12_ST -r AMM12 -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[3520]	760	cd ${SETTE_DIR}
[4252]	761	. ./param.cfg
	762	. ./all_functions.sh
	763	. ./prepare_exe_dir.sh
[10755]	764	set_valid_dir
[10698]	765	clean_valid_dir
[3520]	766	JOB_FILE=${EXE_DIR}/run_job.sh
	767	NPROC=32
[4245]	768	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	769	cd ${EXE_DIR}
[9019]	770	set_namelist namelist_cfg cn_exp \"AMM12_LONG\"
[4147]	771	set_namelist namelist_cfg nn_it000 1
[4252]	772	set_namelist namelist_cfg nn_itend 576
	773	set_namelist namelist_cfg nn_stock 288
[7646]	774	set_namelist namelist_cfg jpni 4
	775	set_namelist namelist_cfg jpnj 8
[10573]	776	set_namelist namelist_cfg ln_ctl .false.
	777	set_namelist namelist_cfg sn_cfctl%l_config .true.
	778	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]	779	if [ ${USING_MPMD} == "yes" ] ; then
	780	set_xio_using_server iodef.xml true
	781	else
	782	set_xio_using_server iodef.xml false
	783	fi
[3520]	784	cd ${SETTE_DIR}
[10755]	785	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	786
	787	cd ${SETTE_DIR}
[3532]	788	export TEST_NAME="SHORT"
[4379]	789	. ./prepare_exe_dir.sh
[10755]	790	set_valid_dir
[10698]	791	clean_valid_dir
[3520]	792	cd ${EXE_DIR}
[9019]	793	set_namelist namelist_cfg cn_exp \"AMM12_SHORT\"
[4252]	794	set_namelist namelist_cfg nn_it000 289
	795	set_namelist namelist_cfg nn_itend 576
[7646]	796	set_namelist namelist_cfg jpni 4
	797	set_namelist namelist_cfg jpnj 8
[10573]	798	set_namelist namelist_cfg ln_ctl .false.
	799	set_namelist namelist_cfg sn_cfctl%l_config .true.
	800	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4147]	801	set_namelist namelist_cfg ln_rstart .true.
	802	set_namelist namelist_cfg nn_rstctl 2
[9019]	803	set_namelist namelist_cfg cn_ocerst_in \"AMM12_LONG_00000288_restart\"
[4252]	804	set_namelist namelist_cfg nn_date0 20120102
[3537]	805	for (( i=1; i<=$NPROC; i++)) ; do
	806	L_NPROC=$(( $i - 1 ))
	807	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9019]	808	ln -sf ../LONG/AMM12_LONG_00000288_restart_${L_NPROC}.nc .
[3537]	809	done
[4245]	810	if [ ${USING_MPMD} == "yes" ] ; then
	811	set_xio_using_server iodef.xml true
	812	else
	813	set_xio_using_server iodef.xml false
	814	fi
[3520]	815	cd ${SETTE_DIR}
[10755]	816	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	817	cd ${SETTE_DIR}
[3532]	818	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	819
[3680]	820	## Reproducibility tests for AMM12
	821	export TEST_NAME="REPRO_8_4"
[9658]	822	cd ${MAIN_DIR}
[3520]	823	cd ${SETTE_DIR}
[4252]	824	. ./param.cfg
	825	. ./all_functions.sh
	826	. ./prepare_exe_dir.sh
[10755]	827	set_valid_dir
[10698]	828	clean_valid_dir
[3520]	829	JOB_FILE=${EXE_DIR}/run_job.sh
	830	NPROC=32
[4245]	831	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	832	cd ${EXE_DIR}
[9019]	833	set_namelist namelist_cfg cn_exp \"AMM12_84\"
[4147]	834	set_namelist namelist_cfg nn_it000 1
	835	set_namelist namelist_cfg nn_itend 576
	836	set_namelist namelist_cfg jpni 8
	837	set_namelist namelist_cfg jpnj 4
[10573]	838	set_namelist namelist_cfg ln_ctl .false.
	839	set_namelist namelist_cfg sn_cfctl%l_config .true.
	840	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]	841	if [ ${USING_MPMD} == "yes" ] ; then
	842	set_xio_using_server iodef.xml true
	843	else
	844	set_xio_using_server iodef.xml false
	845	fi
[3520]	846	cd ${SETTE_DIR}
[10755]	847	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	848	cd ${SETTE_DIR}
	849	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	850
	851	cd ${SETTE_DIR}
[3680]	852	export TEST_NAME="REPRO_4_8"
[4252]	853	. ./prepare_exe_dir.sh
[10755]	854	set_valid_dir
[10698]	855	clean_valid_dir
[5478]	856	JOB_FILE=${EXE_DIR}/run_job.sh
	857	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]	858	cd ${EXE_DIR}
[9019]	859	set_namelist namelist_cfg cn_exp \"AMM12_48\"
[4147]	860	set_namelist namelist_cfg nn_it000 1
	861	set_namelist namelist_cfg nn_itend 576
	862	set_namelist namelist_cfg jpni 4
	863	set_namelist namelist_cfg jpnj 8
[10573]	864	set_namelist namelist_cfg ln_ctl .false.
	865	set_namelist namelist_cfg sn_cfctl%l_config .true.
	866	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4245]	867	if [ ${USING_MPMD} == "yes" ] ; then
	868	set_xio_using_server iodef.xml true
	869	else
	870	set_xio_using_server iodef.xml false
	871	fi
[3520]	872	cd ${SETTE_DIR}
[10755]	873	. ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[3520]	874	cd ${SETTE_DIR}
[3532]	875	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]	876	fi
	877
	878
[9518]	879	# ---------
	880	# ORCA2_SAS
	881	# ---------
[10747]	882	if [ ${config} == "SAS" ] ; then
[9518]	883	## Restartability tests
[4147]	884	export TEST_NAME="LONG"
[9658]	885	cd ${MAIN_DIR}
[12289]	886	#
	887	# syncronisation if target directory/file exist (not done by makenemo)
	888	. ${SETTE_DIR}/all_functions.sh
[12422]	889	sync_config ORCA2_SAS_ICE ORCA2_SAS_ICE_ST 'cfgs'
	890	clean_config ORCA2_SAS_ICE ORCA2_SAS_ICE_ST 'cfgs'
[12289]	891	#
[11497]	892	. ./makenemo -m ${CMP_NAM} -n ORCA2_SAS_ICE_ST -r ORCA2_SAS_ICE -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[4147]	893	cd ${SETTE_DIR}
[4252]	894	. ./param.cfg
	895	. ./all_functions.sh
	896	. ./prepare_exe_dir.sh
[10755]	897	set_valid_dir
[10698]	898	clean_valid_dir
[4147]	899	JOB_FILE=${EXE_DIR}/run_job.sh
	900	NPROC=32
[7646]	901	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]	902	cd ${EXE_DIR}
	903	set_namelist namelist_cfg cn_exp \"SAS\"
	904	set_namelist namelist_cfg nn_it000 1
[10750]	905	set_namelist namelist_cfg nn_itend 256
	906	set_namelist namelist_cfg nn_stock 128
[7646]	907	set_namelist namelist_cfg jpni 4
	908	set_namelist namelist_cfg jpnj 8
[10573]	909	set_namelist namelist_cfg ln_ctl .false.
	910	set_namelist namelist_cfg sn_cfctl%l_config .true.
	911	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9019]	912	set_namelist namelist_ice_cfg ln_icediachk .true.
[4245]	913	if [ ${USING_MPMD} == "yes" ] ; then
	914	set_xio_using_server iodef.xml true
	915	else
	916	set_xio_using_server iodef.xml false
	917	fi
[4147]	918	cd ${SETTE_DIR}
[10755]	919	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4147]	920
	921	cd ${SETTE_DIR}
	922	export TEST_NAME="SHORT"
[4252]	923	. ./prepare_exe_dir.sh
[10755]	924	set_valid_dir
[10698]	925	clean_valid_dir
[4147]	926	cd ${EXE_DIR}
	927	set_namelist namelist_cfg cn_exp \"SAS\"
[10750]	928	set_namelist namelist_cfg nn_it000 129
	929	set_namelist namelist_cfg nn_itend 256
[7646]	930	set_namelist namelist_cfg jpni 4
	931	set_namelist namelist_cfg jpnj 8
[10573]	932	set_namelist namelist_cfg ln_ctl .false.
	933	set_namelist namelist_cfg sn_cfctl%l_config .true.
	934	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[7646]	935	set_namelist namelist_cfg ln_rstart .true.
[4147]	936	set_namelist namelist_cfg nn_rstctl 2
[9019]	937	set_namelist namelist_cfg nn_date0 010109
[10750]	938	set_namelist namelist_cfg cn_ocerst_in \"SAS_00000128_restart\"
	939	set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000128_restart_ice\"
[4245]	940	if [ ${USING_MPMD} == "yes" ] ; then
	941	set_xio_using_server iodef.xml true
	942	else
	943	set_xio_using_server iodef.xml false
	944	fi
[7646]	945	for (( i=1; i<=$NPROC; i++)) ; do
	946	L_NPROC=$(( $i - 1 ))
	947	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[10750]	948	ln -sf ../LONG/SAS_00000128_restart_${L_NPROC}.nc .
	949	ln -sf ../LONG/SAS_00000128_restart_ice_${L_NPROC}.nc .
[7646]	950	done
[4147]	951	cd ${SETTE_DIR}
[10755]	952	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4147]	953	cd ${SETTE_DIR}
	954	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	955
[9518]	956	## Reproducibility tests
	957	export TEST_NAME="REPRO_4_8"
[9658]	958	cd ${MAIN_DIR}
[4990]	959	cd ${SETTE_DIR}
	960	. ./param.cfg
	961	. ./all_functions.sh
	962	. ./prepare_exe_dir.sh
[10755]	963	set_valid_dir
[10698]	964	clean_valid_dir
[4990]	965	JOB_FILE=${EXE_DIR}/run_job.sh
[9518]	966	NPROC=32
[4990]	967	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	968	cd ${EXE_DIR}
[9518]	969	set_namelist namelist_cfg cn_exp \"SAS_48\"
[4990]	970	set_namelist namelist_cfg nn_it000 1
[10750]	971	set_namelist namelist_cfg nn_itend 80
[9518]	972	set_namelist namelist_cfg jpni 4
	973	set_namelist namelist_cfg jpnj 8
[10573]	974	set_namelist namelist_cfg ln_ctl .false.
	975	set_namelist namelist_cfg sn_cfctl%l_config .true.
	976	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4990]	977	if [ ${USING_MPMD} == "yes" ] ; then
	978	set_xio_using_server iodef.xml true
	979	else
	980	set_xio_using_server iodef.xml false
	981	fi
	982	cd ${SETTE_DIR}
[10755]	983	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	984	cd ${SETTE_DIR}
	985	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[9019]	986
[4990]	987	cd ${SETTE_DIR}
[7646]	988	export TEST_NAME="REPRO_8_4"
[4990]	989	. ./prepare_exe_dir.sh
[10755]	990	set_valid_dir
[10698]	991	clean_valid_dir
[4990]	992	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	993	NPROC=32
[4990]	994	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	995	cd ${EXE_DIR}
[9518]	996	set_namelist namelist_cfg cn_exp \"SAS_84\"
[4990]	997	set_namelist namelist_cfg nn_it000 1
[10750]	998	set_namelist namelist_cfg nn_itend 80
[7646]	999	set_namelist namelist_cfg jpni 8
	1000	set_namelist namelist_cfg jpnj 4
[10573]	1001	set_namelist namelist_cfg ln_ctl .false.
	1002	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1003	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[4990]	1004	if [ ${USING_MPMD} == "yes" ] ; then
	1005	set_xio_using_server iodef.xml true
	1006	else
	1007	set_xio_using_server iodef.xml false
	1008	fi
	1009	cd ${SETTE_DIR}
[10755]	1010	. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	1011	cd ${SETTE_DIR}
	1012	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1013
	1014	fi
	1015
[9518]	1016
	1017	# --------------
[9663]	1018	# ORCA2_ICE_OBS
[9518]	1019	# --------------
[4990]	1020	## Test assimilation interface code, OBS and ASM for reproducibility
	1021	## Restartability not tested (ASM code not restartable while increments are being applied)
[10747]	1022	if [ ${config} == "ORCA2_ICE_OBS" ] ; then
[9518]	1023	## Reproducibility tests
[7646]	1024	export TEST_NAME="REPRO_4_8"
[9658]	1025	cd ${MAIN_DIR}
[12289]	1026	#
	1027	# syncronisation if target directory/file exist (not done by makenemo)
	1028	. ${SETTE_DIR}/all_functions.sh
[12422]	1029	sync_config ORCA2_ICE_PISCES ORCA2_ICE_OBS_ST 'cfgs'
	1030	clean_config ORCA2_ICE_PISCES ORCA2_ICE_OBS_ST 'cfgs'
[12289]	1031	#
[10687]	1032	. ./makenemo -m ${CMP_NAM} -n ORCA2_ICE_OBS_ST -r ORCA2_ICE_PISCES -d "OCE ICE" -j 8 add_key "key_asminc ${ADD_KEYS}" del_key "key_top"
[4990]	1033	cd ${SETTE_DIR}
	1034	. ./param.cfg
	1035	. ./all_functions.sh
	1036	. ./prepare_exe_dir.sh
[10755]	1037	set_valid_dir
[10698]	1038	clean_valid_dir
[4990]	1039	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	1040	NPROC=32
[4990]	1041	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1042	cd ${EXE_DIR}
[9019]	1043	set_namelist namelist_cfg cn_exp \"O2L3OBS_48\"
[4990]	1044	set_namelist namelist_cfg nn_it000 1
[10750]	1045	set_namelist namelist_cfg nn_itend 80
[7646]	1046	set_namelist namelist_cfg ln_read_cfg .true.
[4990]	1047	set_namelist namelist_cfg jpni 4
[7646]	1048	set_namelist namelist_cfg jpnj 8
[10573]	1049	set_namelist namelist_cfg ln_ctl .false.
	1050	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1051	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	1052	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[6140]	1053	set_namelist namelist_cfg ln_diaobs .true.
[4990]	1054	set_namelist namelist_cfg ln_t3d .true.
	1055	set_namelist namelist_cfg ln_s3d .true.
	1056	set_namelist namelist_cfg ln_sst .true.
	1057	set_namelist namelist_cfg ln_sla .true.
[6140]	1058	set_namelist namelist_cfg ln_sic .true.
	1059	set_namelist namelist_cfg ln_vel3d .true.
[4990]	1060	set_namelist namelist_cfg ln_bkgwri .true.
	1061	set_namelist namelist_cfg ln_trainc .true.
	1062	set_namelist namelist_cfg ln_dyninc .true.
	1063	set_namelist namelist_cfg ln_sshinc .true.
	1064	set_namelist namelist_cfg ln_asmiau .true.
[9663]	1065	#remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
[7722]	1066	set_namelist namelist_top_cfg ln_trcdta .false.
	1067	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	1068	# if not you need input files, and for tests is not necessary
	1069	set_namelist namelist_pisces_cfg ln_presatm .false.
	1070	set_namelist namelist_pisces_cfg ln_varpar .false.
	1071	set_namelist namelist_pisces_cfg ln_dust .false.
	1072	set_namelist namelist_pisces_cfg ln_solub .false.
	1073	set_namelist namelist_pisces_cfg ln_river .false.
	1074	set_namelist namelist_pisces_cfg ln_ndepo .false.
	1075	set_namelist namelist_pisces_cfg ln_ironsed .false.
	1076	set_namelist namelist_pisces_cfg ln_ironice .false.
	1077	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]	1078	if [ ${USING_MPMD} == "yes" ] ; then
	1079	set_xio_using_server iodef.xml true
	1080	else
	1081	set_xio_using_server iodef.xml false
	1082	fi
	1083	cd ${SETTE_DIR}
[10755]	1084	. ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	1085	cd ${SETTE_DIR}
	1086	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1087
	1088	cd ${SETTE_DIR}
[7646]	1089	export TEST_NAME="REPRO_8_4"
[4990]	1090	. ./prepare_exe_dir.sh
[10755]	1091	set_valid_dir
[10698]	1092	clean_valid_dir
[4990]	1093	JOB_FILE=${EXE_DIR}/run_job.sh
[7646]	1094	NPROC=32
[4990]	1095	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1096	cd ${EXE_DIR}
[9019]	1097	set_namelist namelist_cfg cn_exp \"O2L3OBS_84\"
[4990]	1098	set_namelist namelist_cfg nn_it000 1
[10750]	1099	set_namelist namelist_cfg nn_itend 80
[7646]	1100	set_namelist namelist_cfg ln_read_cfg .true.
	1101	set_namelist namelist_cfg jpni 8
	1102	set_namelist namelist_cfg jpnj 4
[10573]	1103	set_namelist namelist_cfg ln_ctl .false.
	1104	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1105	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
	1106	set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
[6140]	1107	set_namelist namelist_cfg ln_diaobs .true.
[4990]	1108	set_namelist namelist_cfg ln_t3d .true.
	1109	set_namelist namelist_cfg ln_s3d .true.
	1110	set_namelist namelist_cfg ln_sst .true.
	1111	set_namelist namelist_cfg ln_sla .true.
[6140]	1112	set_namelist namelist_cfg ln_sic .true.
	1113	set_namelist namelist_cfg ln_vel3d .true.
[4990]	1114	set_namelist namelist_cfg ln_bkgwri .true.
	1115	set_namelist namelist_cfg ln_trainc .true.
	1116	set_namelist namelist_cfg ln_dyninc .true.
	1117	set_namelist namelist_cfg ln_sshinc .true.
	1118	set_namelist namelist_cfg ln_asmiau .true.
[9663]	1119	#remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
[7722]	1120	set_namelist namelist_top_cfg ln_trcdta .false.
	1121	# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
	1122	# if not you need input files, and for tests is not necessary
	1123	set_namelist namelist_pisces_cfg ln_presatm .false.
	1124	set_namelist namelist_pisces_cfg ln_varpar .false.
	1125	set_namelist namelist_pisces_cfg ln_dust .false.
	1126	set_namelist namelist_pisces_cfg ln_solub .false.
	1127	set_namelist namelist_pisces_cfg ln_river .false.
	1128	set_namelist namelist_pisces_cfg ln_ndepo .false.
	1129	set_namelist namelist_pisces_cfg ln_ironsed .false.
	1130	set_namelist namelist_pisces_cfg ln_ironice .false.
	1131	set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]	1132	if [ ${USING_MPMD} == "yes" ] ; then
	1133	set_xio_using_server iodef.xml true
	1134	else
	1135	set_xio_using_server iodef.xml false
	1136	fi
	1137	cd ${SETTE_DIR}
[10755]	1138	. ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[4990]	1139	cd ${SETTE_DIR}
	1140	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1141	fi
[5589]	1142
[9483]	1143	# ------------
[9663]	1144	# AGRIF ICE
[9483]	1145	# -----------
[10747]	1146	if [ ${config} == "AGRIF" ] ; then
[9518]	1147	## Restartability tests
[9483]	1148	export TEST_NAME="LONG"
[9658]	1149	cd ${MAIN_DIR}
[12289]	1150	#
	1151	# syncronisation if target directory/file exist (not done by makenemo)
	1152	. ${SETTE_DIR}/all_functions.sh
[12422]	1153	sync_config AGRIF_DEMO AGRIF_DEMO_ST 'cfgs'
	1154	clean_config AGRIF_DEMO AGRIF_DEMO_ST 'cfgs'
[12289]	1155	#
[11497]	1156	. ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_ST -r AGRIF_DEMO -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9483]	1157	cd ${SETTE_DIR}
	1158	. ./param.cfg
	1159	. ./all_functions.sh
	1160	. ./prepare_exe_dir.sh
[10755]	1161	set_valid_dir
[10698]	1162	clean_valid_dir
[9483]	1163	JOB_FILE=${EXE_DIR}/run_job.sh
[9776]	1164	NPROC=16
[9483]	1165	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1166	cd ${EXE_DIR}
	1167	set_namelist namelist_cfg cn_exp \"AGRIF_LONG\"
	1168	set_namelist namelist_cfg nn_it000 1
	1169	set_namelist namelist_cfg nn_itend 20
	1170	set_namelist namelist_cfg nn_stock 10
[10573]	1171	set_namelist namelist_cfg ln_ctl .false.
	1172	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1173	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1174	set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\"
	1175	set_namelist 1_namelist_cfg nn_it000 1
[9776]	1176	set_namelist 1_namelist_cfg nn_itend 20
	1177	set_namelist 1_namelist_cfg nn_stock 10
[10573]	1178	set_namelist 1_namelist_cfg ln_ctl .false.
	1179	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1180	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1181	set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\"
	1182	set_namelist 2_namelist_cfg nn_it000 1
[9776]	1183	set_namelist 2_namelist_cfg nn_itend 80
	1184	set_namelist 2_namelist_cfg nn_stock 40
[10573]	1185	set_namelist 2_namelist_cfg ln_ctl .false.
	1186	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1187	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9776]	1188	set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\"
	1189	set_namelist 3_namelist_cfg nn_it000 1
	1190	set_namelist 3_namelist_cfg nn_itend 240
	1191	set_namelist 3_namelist_cfg nn_stock 120
[10573]	1192	set_namelist 3_namelist_cfg ln_ctl .false.
	1193	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1194	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9507]	1195
[9483]	1196	if [ ${USING_MPMD} == "yes" ] ; then
	1197	set_xio_using_server iodef.xml true
	1198	else
	1199	set_xio_using_server iodef.xml false
	1200	fi
	1201	cd ${SETTE_DIR}
[10755]	1202	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1203
	1204	cd ${SETTE_DIR}
	1205	export TEST_NAME="SHORT"
	1206	. ./prepare_exe_dir.sh
[10755]	1207	set_valid_dir
[10698]	1208	clean_valid_dir
[9483]	1209	cd ${EXE_DIR}
	1210	set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\"
	1211	set_namelist namelist_cfg nn_it000 11
	1212	set_namelist namelist_cfg nn_itend 20
	1213	set_namelist namelist_cfg nn_stock 10
[10573]	1214	set_namelist namelist_cfg ln_ctl .false.
	1215	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1216	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1217	set_namelist namelist_cfg ln_rstart .true.
	1218	set_namelist namelist_cfg nn_rstctl 2
	1219	set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\"
[9776]	1220	set_namelist 1_namelist_cfg nn_it000 11
	1221	set_namelist 1_namelist_cfg nn_itend 20
	1222	set_namelist 1_namelist_cfg nn_stock 10
[10573]	1223	set_namelist 1_namelist_cfg ln_ctl .false.
	1224	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1225	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1226	set_namelist 1_namelist_cfg ln_rstart .true.
	1227	set_namelist 1_namelist_cfg nn_rstctl 2
	1228	set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\"
[9776]	1229	set_namelist 2_namelist_cfg nn_it000 41
	1230	set_namelist 2_namelist_cfg nn_itend 80
	1231	set_namelist 2_namelist_cfg nn_stock 40
[10573]	1232	set_namelist 2_namelist_cfg ln_ctl .false.
	1233	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1234	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1235	set_namelist 2_namelist_cfg ln_rstart .true.
	1236	set_namelist 2_namelist_cfg nn_rstctl 2
[9776]	1237	set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\"
	1238	set_namelist 3_namelist_cfg nn_it000 121
	1239	set_namelist 3_namelist_cfg nn_itend 240
	1240	set_namelist 3_namelist_cfg nn_stock 120
[10573]	1241	set_namelist 3_namelist_cfg ln_ctl .false.
	1242	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1243	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9776]	1244	set_namelist 3_namelist_cfg ln_rstart .true.
	1245	set_namelist 3_namelist_cfg nn_rstctl 2
[9483]	1246	set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
	1247	set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
[9776]	1248	set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000010_restart\"
	1249	set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000010_restart_ice\"
	1250	set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000040_restart\"
	1251	set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000040_restart_ice\"
	1252	set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_00000120_restart\"
	1253	set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_00000120_restart_ice\"
[9483]	1254
	1255	for (( i=1; i<=$NPROC; i++)) ; do
	1256	L_NPROC=$(( $i - 1 ))
	1257	L_NPROC=`printf "%04d\n" ${L_NPROC}`
	1258	ln -sf ../LONG/AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
	1259	ln -sf ../LONG/AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
[9776]	1260	ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_${L_NPROC}.nc .
	1261	ln -sf ../LONG/1_AGRIF_LONG_00000010_restart_ice_${L_NPROC}.nc .
	1262	ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_${L_NPROC}.nc .
	1263	ln -sf ../LONG/2_AGRIF_LONG_00000040_restart_ice_${L_NPROC}.nc .
	1264	ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_${L_NPROC}.nc .
	1265	ln -sf ../LONG/3_AGRIF_LONG_00000120_restart_ice_${L_NPROC}.nc .
[9483]	1266	done
	1267	if [ ${USING_MPMD} == "yes" ] ; then
	1268	set_xio_using_server iodef.xml true
	1269	else
	1270	set_xio_using_server iodef.xml false
	1271	fi
	1272	cd ${SETTE_DIR}
[10755]	1273	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1274	cd ${SETTE_DIR}
	1275	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1276
[9518]	1277	## Reproducibility tests
[11800]	1278	export TEST_NAME="REPRO_2_8"
[9658]	1279	cd ${MAIN_DIR}
[9483]	1280	cd ${SETTE_DIR}
	1281	. ./param.cfg
	1282	. ./all_functions.sh
	1283	. ./prepare_exe_dir.sh
[10755]	1284	set_valid_dir
[10698]	1285	clean_valid_dir
[9483]	1286	JOB_FILE=${EXE_DIR}/run_job.sh
[11800]	1287	NPROC=16
[9483]	1288	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1289	cd ${EXE_DIR}
[11800]	1290	set_namelist namelist_cfg cn_exp \"AGRIF_28\"
[9483]	1291	set_namelist namelist_cfg nn_it000 1
	1292	set_namelist namelist_cfg nn_itend 20
[11800]	1293	set_namelist namelist_cfg jpni 2
[9483]	1294	set_namelist namelist_cfg jpnj 8
[10573]	1295	set_namelist namelist_cfg ln_ctl .false.
	1296	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1297	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1298	set_namelist 1_namelist_cfg cn_exp \"AGRIF_28\"
[9483]	1299	set_namelist 1_namelist_cfg nn_it000 1
[9776]	1300	set_namelist 1_namelist_cfg nn_itend 20
[11800]	1301	set_namelist 1_namelist_cfg jpni 2
[9483]	1302	set_namelist 1_namelist_cfg jpnj 8
[10573]	1303	set_namelist 1_namelist_cfg ln_ctl .false.
	1304	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1305	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1306	set_namelist 2_namelist_cfg cn_exp \"AGRIF_28\"
[9483]	1307	set_namelist 2_namelist_cfg nn_it000 1
[9776]	1308	set_namelist 2_namelist_cfg nn_itend 80
[11800]	1309	set_namelist 2_namelist_cfg jpni 2
[9483]	1310	set_namelist 2_namelist_cfg jpnj 8
[10573]	1311	set_namelist 2_namelist_cfg ln_ctl .false.
	1312	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1313	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1314	set_namelist 3_namelist_cfg cn_exp \"AGRIF_28\"
[9776]	1315	set_namelist 3_namelist_cfg nn_it000 1
	1316	set_namelist 3_namelist_cfg nn_itend 240
[11800]	1317	set_namelist 3_namelist_cfg jpni 2
[9776]	1318	set_namelist 3_namelist_cfg jpnj 8
[10573]	1319	set_namelist 3_namelist_cfg ln_ctl .false.
	1320	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1321	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1322
	1323	if [ ${USING_MPMD} == "yes" ] ; then
	1324	set_xio_using_server iodef.xml true
	1325	else
	1326	set_xio_using_server iodef.xml false
	1327	fi
	1328	cd ${SETTE_DIR}
[10755]	1329	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1330	cd ${SETTE_DIR}
	1331	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1332
	1333	cd ${SETTE_DIR}
[11800]	1334	export TEST_NAME="REPRO_4_4"
[9483]	1335	. ./prepare_exe_dir.sh
[10755]	1336	set_valid_dir
[10698]	1337	clean_valid_dir
[9483]	1338	JOB_FILE=${EXE_DIR}/run_job.sh
[11800]	1339	NPROC=16
[9483]	1340	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1341	cd ${EXE_DIR}
[11800]	1342	set_namelist namelist_cfg cn_exp \"AGRIF_44\"
[9483]	1343	set_namelist namelist_cfg nn_it000 1
	1344	set_namelist namelist_cfg nn_itend 20
[11800]	1345	set_namelist namelist_cfg jpni 4
[9483]	1346	set_namelist namelist_cfg jpnj 4
[10573]	1347	set_namelist namelist_cfg ln_ctl .false.
	1348	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1349	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1350	set_namelist 1_namelist_cfg cn_exp \"AGRIF_44\"
[9483]	1351	set_namelist 1_namelist_cfg nn_it000 1
[9776]	1352	set_namelist 1_namelist_cfg nn_itend 20
[11800]	1353	set_namelist 1_namelist_cfg jpni 4
[9483]	1354	set_namelist 1_namelist_cfg jpnj 4
[10573]	1355	set_namelist 1_namelist_cfg ln_ctl .false.
	1356	set_namelist 1_namelist_cfg sn_cfctl%l_config .true.
	1357	set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
[11800]	1358	set_namelist 2_namelist_cfg cn_exp \"AGRIF_44\"
[9483]	1359	set_namelist 2_namelist_cfg nn_it000 1
[9776]	1360	set_namelist 2_namelist_cfg nn_itend 80
[11800]	1361	set_namelist 2_namelist_cfg jpni 4
[9483]	1362	set_namelist 2_namelist_cfg jpnj 4
[10573]	1363	set_namelist 2_namelist_cfg ln_ctl .false.
	1364	set_namelist 2_namelist_cfg sn_cfctl%l_config .true.
	1365	set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
[9776]	1366	set_namelist 3_namelist_cfg cn_exp \"AGRIF_84\"
	1367	set_namelist 3_namelist_cfg nn_it000 1
	1368	set_namelist 3_namelist_cfg nn_itend 240
[11800]	1369	set_namelist 3_namelist_cfg jpni 4
[9776]	1370	set_namelist 3_namelist_cfg jpnj 4
[10573]	1371	set_namelist 3_namelist_cfg ln_ctl .false.
	1372	set_namelist 3_namelist_cfg sn_cfctl%l_config .true.
	1373	set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1374
	1375	if [ ${USING_MPMD} == "yes" ] ; then
	1376	set_xio_using_server iodef.xml true
	1377	else
	1378	set_xio_using_server iodef.xml false
	1379	fi
	1380	cd ${SETTE_DIR}
[10755]	1381	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1382	cd ${SETTE_DIR}
	1383	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1384
[9507]	1385	## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom
	1386	export TEST_NAME="ORCA2"
[9658]	1387	cd ${MAIN_DIR}
[9483]	1388	cd ${SETTE_DIR}
	1389	. ./param.cfg
	1390	. ./all_functions.sh
	1391	. ./prepare_exe_dir.sh
[10755]	1392	set_valid_dir
[10698]	1393	clean_valid_dir
[9483]	1394	JOB_FILE=${EXE_DIR}/run_job.sh
	1395	NPROC=32
	1396	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1397	cd ${EXE_DIR}
[9507]	1398	set_namelist namelist_cfg cn_exp \"ORCA2\"
[9483]	1399	set_namelist namelist_cfg nn_it000 1
	1400	set_namelist namelist_cfg nn_itend 150
[10573]	1401	set_namelist namelist_cfg ln_ctl .false.
	1402	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1403	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9507]	1404
[9483]	1405	# Set the number of fine grids to zero:
	1406	sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
	1407
	1408	if [ ${USING_MPMD} == "yes" ] ; then
	1409	set_xio_using_server iodef.xml true
	1410	else
	1411	set_xio_using_server iodef.xml false
	1412	fi
	1413	cd ${SETTE_DIR}
[10755]	1414	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1415	cd ${SETTE_DIR}
	1416	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1417
	1418	fi
	1419
[9525]	1420
[9776]	1421	## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2)
[10747]	1422	if [ ${config} == "AGRIF" ] ; then
[9507]	1423	export TEST_NAME="ORCA2"
[9658]	1424	cd ${MAIN_DIR}
[12289]	1425	#
	1426	# syncronisation if target directory/file exist (not done by makenemo)
	1427	. ${SETTE_DIR}/all_functions.sh
[12422]	1428	sync_config AGRIF_DEMO AGRIF_DEMO_NOAGRIF_ST 'cfgs'
	1429	clean_config AGRIF_DEMO AGRIF_DEMO_NOAGRIF_ST 'cfgs'
[12289]	1430	#
[11497]	1431	. ./makenemo -m ${CMP_NAM} -n AGRIF_DEMO_NOAGRIF_ST -r AGRIF_DEMO -j 8 add_key "${ADD_KEYS}" del_key "key_agrif"
[9483]	1432	cd ${SETTE_DIR}
	1433	. ./param.cfg
	1434	. ./all_functions.sh
	1435	. ./prepare_exe_dir.sh
[10755]	1436	set_valid_dir
[10698]	1437	clean_valid_dir
[9483]	1438	JOB_FILE=${EXE_DIR}/run_job.sh
	1439	NPROC=32
	1440	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1441	cd ${EXE_DIR}
[9507]	1442	set_namelist namelist_cfg cn_exp \"ORCA2\"
[9483]	1443	set_namelist namelist_cfg nn_it000 1
	1444	set_namelist namelist_cfg nn_itend 150
[10573]	1445	set_namelist namelist_cfg ln_ctl .false.
	1446	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1447	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9483]	1448	#
	1449	if [ ${USING_MPMD} == "yes" ] ; then
	1450	set_xio_using_server iodef.xml true
	1451	else
	1452	set_xio_using_server iodef.xml false
	1453	fi
	1454	cd ${SETTE_DIR}
[10755]	1455	. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9483]	1456	cd ${SETTE_DIR}
	1457	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1458
	1459	fi
	1460
[9553]	1461	# -------
	1462	# SPITZ12
	1463	# -------
[10747]	1464	if [ ${config} == "SPITZ12" ] ; then
[9553]	1465	## Restartability tests
	1466	export TEST_NAME="LONG"
[9658]	1467	cd ${MAIN_DIR}
[12289]	1468	#
	1469	# syncronisation if target directory/file exist (not done by makenemo)
	1470	. ${SETTE_DIR}/all_functions.sh
[12422]	1471	sync_config SPITZ12 SPITZ12_ST 'cfgs'
	1472	clean_config SPITZ12 SPITZ12_ST 'cfgs'
[12289]	1473	#
[11497]	1474	. ./makenemo -m ${CMP_NAM} -n SPITZ12_ST -r SPITZ12 -j 8 add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
[9553]	1475	cd ${SETTE_DIR}
	1476	. ./param.cfg
	1477	. ./all_functions.sh
	1478	. ./prepare_exe_dir.sh
[10755]	1479	set_valid_dir
[10698]	1480	clean_valid_dir
[9553]	1481	JOB_FILE=${EXE_DIR}/run_job.sh
	1482	NPROC=32
	1483	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1484	cd ${EXE_DIR}
	1485	set_namelist namelist_cfg cn_exp \"S12_LONG\"
	1486	set_namelist namelist_cfg nn_it000 1
[9744]	1487	set_namelist namelist_cfg nn_itend 240
	1488	set_namelist namelist_cfg nn_stock 120
	1489	set_namelist namelist_cfg nn_date0 20020101
[9553]	1490	set_namelist namelist_cfg jpni 4
	1491	set_namelist namelist_cfg jpnj 8
[10573]	1492	set_namelist namelist_cfg ln_ctl .false.
	1493	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1494	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9744]	1495	#set_namelist namelist_ice_cfg ln_icediachk .true.
[9553]	1496	if [ ${USING_MPMD} == "yes" ] ; then
	1497	set_xio_using_server iodef.xml true
	1498	else
	1499	set_xio_using_server iodef.xml false
	1500	fi
	1501	cd ${SETTE_DIR}
[10755]	1502	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1503
	1504	cd ${SETTE_DIR}
	1505	export TEST_NAME="SHORT"
	1506	. ./prepare_exe_dir.sh
[10755]	1507	set_valid_dir
[10698]	1508	clean_valid_dir
[9553]	1509	cd ${EXE_DIR}
	1510	set_namelist namelist_cfg cn_exp \"S12_SHORT\"
[9744]	1511	set_namelist namelist_cfg nn_it000 121
	1512	set_namelist namelist_cfg nn_itend 240
	1513	set_namelist namelist_cfg nn_stock 120
[9553]	1514	set_namelist namelist_cfg ln_rstart .true.
	1515	set_namelist namelist_cfg nn_rstctl 2
	1516	set_namelist namelist_cfg jpni 4
	1517	set_namelist namelist_cfg jpnj 8
[10573]	1518	set_namelist namelist_cfg ln_ctl .false.
	1519	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1520	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9744]	1521	set_namelist namelist_cfg cn_ocerst_in \"S12_LONG_00000120_restart\"
	1522	set_namelist namelist_ice_cfg cn_icerst_in \"S12_LONG_00000120_restart_ice\"
[9553]	1523	for (( i=1; i<=$NPROC; i++)) ; do
	1524	L_NPROC=$(( $i - 1 ))
	1525	L_NPROC=`printf "%04d\n" ${L_NPROC}`
[9744]	1526	ln -sf ../LONG/S12_LONG_00000120_restart_${L_NPROC}.nc .
	1527	ln -sf ../LONG/S12_LONG_00000120_restart_ice_${L_NPROC}.nc .
[9553]	1528	done
	1529	if [ ${USING_MPMD} == "yes" ] ; then
	1530	set_xio_using_server iodef.xml true
	1531	else
	1532	set_xio_using_server iodef.xml false
	1533	fi
	1534	cd ${SETTE_DIR}
[10755]	1535	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1536	cd ${SETTE_DIR}
	1537	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1538
	1539	## Reproducibility tests
	1540	export TEST_NAME="REPRO_4_8"
[9658]	1541	cd ${MAIN_DIR}
[9553]	1542	cd ${SETTE_DIR}
	1543	. ./param.cfg
	1544	. ./all_functions.sh
	1545	. ./prepare_exe_dir.sh
[10755]	1546	set_valid_dir
[10698]	1547	clean_valid_dir
[9553]	1548	JOB_FILE=${EXE_DIR}/run_job.sh
	1549	NPROC=32
	1550	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1551	cd ${EXE_DIR}
	1552	set_namelist namelist_cfg cn_exp \"S12_48\"
	1553	set_namelist namelist_cfg nn_it000 1
[9744]	1554	set_namelist namelist_cfg nn_itend 120
	1555	set_namelist namelist_cfg nn_date0 20020101
[9553]	1556	set_namelist namelist_cfg jpni 4
	1557	set_namelist namelist_cfg jpnj 8
[10573]	1558	set_namelist namelist_cfg ln_ctl .false.
	1559	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1560	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9553]	1561	if [ ${USING_MPMD} == "yes" ] ; then
	1562	set_xio_using_server iodef.xml true
	1563	else
	1564	set_xio_using_server iodef.xml false
	1565	fi
	1566	cd ${SETTE_DIR}
[10755]	1567	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1568	cd ${SETTE_DIR}
	1569	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1570
	1571	cd ${SETTE_DIR}
	1572	export TEST_NAME="REPRO_8_4"
	1573	. ./prepare_exe_dir.sh
[10755]	1574	set_valid_dir
[10698]	1575	clean_valid_dir
[9553]	1576	JOB_FILE=${EXE_DIR}/run_job.sh
	1577	NPROC=32
	1578	if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
	1579	cd ${EXE_DIR}
	1580	set_namelist namelist_cfg cn_exp \"S12_84\"
	1581	set_namelist namelist_cfg nn_it000 1
[9744]	1582	set_namelist namelist_cfg nn_itend 120
	1583	set_namelist namelist_cfg nn_date0 20020101
[9553]	1584	set_namelist namelist_cfg jpni 8
	1585	set_namelist namelist_cfg jpnj 4
[10573]	1586	set_namelist namelist_cfg ln_ctl .false.
	1587	set_namelist namelist_cfg sn_cfctl%l_config .true.
	1588	set_namelist namelist_cfg sn_cfctl%l_runstat .true.
[9553]	1589	if [ ${USING_MPMD} == "yes" ] ; then
	1590	set_xio_using_server iodef.xml true
	1591	else
	1592	set_xio_using_server iodef.xml false
	1593	fi
	1594	cd ${SETTE_DIR}
[10755]	1595	. ./prepare_job.sh input_SPITZ12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
[9553]	1596	cd ${SETTE_DIR}
	1597	. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
	1598	fi
	1599
	1600
[3520]	1601	done

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